| Clone Name | rbags11g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1185 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 871 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 812 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 811 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 752 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 751 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 692 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 691 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 632 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 631 ttcttcctcagcagcttcataccaagggcct 601
>ref|XM_507569.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.9-2 mRNA Length = 1238 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 905 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 846 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 845 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 786 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 785 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 726 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 725 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 666 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 665 ttcttcctcagcagcttcataccaagggcct 635
>ref|XM_507154.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.9-2 mRNA Length = 1254 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 919 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 860 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 859 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 800 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 799 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 740 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 739 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 680 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 679 ttcttcctcagcagcttcataccaagggcct 649
>dbj|AK104866.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H02, full insert sequence Length = 1185 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 871 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 812 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 811 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 752 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 751 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 692 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 691 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 632 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 631 ttcttcctcagcagcttcataccaagggcct 601
>dbj|AK103694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J17, full insert sequence Length = 1238 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 905 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 846 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 845 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 786 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 785 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 726 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 725 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 666 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 665 ttcttcctcagcagcttcataccaagggcct 635
>dbj|AK066092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055G04, full insert sequence Length = 1254 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 919 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 860 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 859 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 800 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 799 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 740 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 739 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 680 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 679 ttcttcctcagcagcttcataccaagggcct 649
>dbj|AB017042.1| Oryza sativa (japonica cultivar-group) mRNA for glyoxalase I, complete cds Length = 931 Score = 232 bits (117), Expect = 5e-58 Identities = 229/271 (84%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 818 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 759 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagca 122 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||||||| Sbjct: 758 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctgagca 699 Query: 123 tatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaacagng 182 ||||| ||||||||| ||||||| | |||||||||| || |||||||||| | ||||| Sbjct: 698 tatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactcaataacagtt 639 Query: 183 gtcttgncctcctcagcatagcccatcatggcaatggngnacttatactgaggcacatnc 242 ||||| |||| ||||||||||||| ||||||||||| ||||||| | ||| |||| | Sbjct: 638 gtcttatcctcatcagcatagcccaacatggcaatggtatacttatagtcaggtacatcc 579 Query: 243 ttcttnctnagaagctnnatnccaagggcct 273 ||||| || || |||| || |||||||||| Sbjct: 578 ttcttcctcagcagcttcataccaagggcct 548
>gb|BT016228.1| Zea mays clone Contig61 mRNA sequence Length = 1324 Score = 200 bits (101), Expect = 2e-48 Identities = 216/259 (83%) Strand = Plus / Minus Query: 15 ggtagtggccctggctgccttagaatctttccacctagttctttggtaaccagctcaact 74 ||||| ||||||||||||| | |||||| ||||||||||||||||| |||| ||||| Sbjct: 916 ggtagaggccctggctgccgcaaaatcttgccacctagttctttggtcgccagatcaacc 857 Query: 75 gcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccc 134 || |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 856 gcctcggcgctcttgtacacatcattggtgccaatggcaacctgagcatatgcattgccc 797 Query: 135 ttgntatattccgngacaccatagntgnatgtcaactccagaacagnggtcttgncctcc 194 ||| | ||||| | ||| |||||| || | |||| ||||||||||| |||||| |||| Sbjct: 796 ttgctgtattctgtgactccatagttgtacgtcagctccagaacagttgtcttgtcctca 737 Query: 195 tcagcatagcccatcatggcaatggngnacttatactgaggcacatncttcttnctnaga 254 ||||||||||||| ||||||||||| |||| || | ||| |||| |||||| || || Sbjct: 736 tcagcatagcccaacatggcaatggtatacttgtaatcaggtacatccttcttccttagg 677 Query: 255 agctnnatnccaagggcct 273 |||| || || ||||||| Sbjct: 676 agcttcatccctagggcct 658
>gb|AY241545.1| Zea mays glyoxalase I (GlxI) mRNA, complete cds Length = 1154 Score = 200 bits (101), Expect = 2e-48 Identities = 216/259 (83%) Strand = Plus / Minus Query: 15 ggtagtggccctggctgccttagaatctttccacctagttctttggtaaccagctcaact 74 ||||| ||||||||||||| | |||||| ||||||||||||||||| |||| |||||| Sbjct: 881 ggtagaggccctggctgccgcaaaatcttgccacctagttctttggtcgccagatcaact 822 Query: 75 gcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccc 134 || || ||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 821 gcctcagcgctcttgtacacatcattggtgccaatggcaacctgagcatatgcattgccc 762 Query: 135 ttgntatattccgngacaccatagntgnatgtcaactccagaacagnggtcttgncctcc 194 ||| | ||||| | ||| |||||| || | |||| ||||||||||| |||||| |||| Sbjct: 761 ttgctgtattctgtgactccatagttgtacgtcagctccagaacagttgtcttgtcctca 702 Query: 195 tcagcatagcccatcatggcaatggngnacttatactgaggcacatncttcttnctnaga 254 ||||||||||||| ||||||||||| |||| || | ||| |||| |||||| || || Sbjct: 701 tcagcatagcccaacatggcaatggtatacttgtaatcaggtacatccttcttccttagg 642 Query: 255 agctnnatnccaagggcct 273 |||| || || ||||||| Sbjct: 641 agcttcatccctagggcct 623
>gb|AY106316.1| Zea mays PCO099929 mRNA sequence Length = 1315 Score = 200 bits (101), Expect = 2e-48 Identities = 216/259 (83%) Strand = Plus / Minus Query: 15 ggtagtggccctggctgccttagaatctttccacctagttctttggtaaccagctcaact 74 ||||| ||||||||||||| | |||||| ||||||||||||||||| |||| ||||| Sbjct: 959 ggtagaggccctggctgccgcaaaatcttgccacctagttctttggtcgccagatcaacc 900 Query: 75 gcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccc 134 || |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 899 gcctcggcgctcttgtacacatcattggtgccaatggcaacctgagcatatgcattgccc 840 Query: 135 ttgntatattccgngacaccatagntgnatgtcaactccagaacagnggtcttgncctcc 194 ||| | ||||| | ||| |||||| || | |||| ||||||||||| |||||| |||| Sbjct: 839 ttgctgtattctgtgactccatagttgtacgtcagctccagaacagttgtcttgtcctca 780 Query: 195 tcagcatagcccatcatggcaatggngnacttatactgaggcacatncttcttnctnaga 254 ||||||||||||| ||||||||||| |||| || | ||| |||| |||||| || || Sbjct: 779 tcagcatagcccaacatggcaatggtatacttgtaatcaggtacatccttcttccttagg 720 Query: 255 agctnnatnccaagggcct 273 |||| || || ||||||| Sbjct: 719 agcttcatccctagggcct 701
>emb|Y10782.1|SSY10782 S.stapfianus pSD.59 mRNA Length = 1201 Score = 155 bits (78), Expect = 1e-34 Identities = 192/233 (82%) Strand = Plus / Minus Query: 15 ggtagtggccctggctgccttagaatctttccacctagttctttggtaaccagctcaact 74 ||||| |||||||||||| | | |||||| || |||| ||||||||| |||| ||||| Sbjct: 824 ggtagcggccctggctgcttcaaaatcttgccccctaattctttggttgccagttcaaca 765 Query: 75 gcttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccc 134 || || || |||||||||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 764 gcctctgcactcttgtacacatcattagtgccgatagcaacctgagcatatgcattgccc 705 Query: 135 ttgntatattccgngacaccatagntgnatgtcaactccagaacagnggtcttgncctcc 194 ||| | ||||| | |||||| ||| || |||||||||| | ||||| |||||| |||| Sbjct: 704 ttgctgtattctgtgacaccgtagttgtatgtcaactctataacagttgtcttgtcctcg 645 Query: 195 tcagcatagcccatcatggcaatggngnacttatactgaggcacatncttctt 247 ||| ||||||||| ||| ||||| | | |||| || | ||| |||| |||||| Sbjct: 644 tcatcatagcccagcatcgcaatagtgtacttgtaatcaggtacatccttctt 592
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 113 bits (57), Expect = 3e-22 Identities = 93/107 (86%) Strand = Plus / Plus Query: 113 aacctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactc 172 ||||||||||||||| ||||||||| ||||||| | |||||||||| || |||||||||| Sbjct: 5368438 aacctgagcatatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactc 5368497 Query: 173 cagaacagnggtcttgncctcctcagcatagcccatcatggcaatgg 219 | ||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5368498 aataacagttgtcttatcctcatcagcatagcccaacatggcaatgg 5368544 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 5368248 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 5368307 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctg 118 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||| Sbjct: 5368308 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctg 5368363
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 113 bits (57), Expect = 3e-22 Identities = 93/107 (86%) Strand = Plus / Plus Query: 113 aacctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactc 172 ||||||||||||||| ||||||||| ||||||| | |||||||||| || |||||||||| Sbjct: 38249 aacctgagcatatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactc 38308 Query: 173 cagaacagnggtcttgncctcctcagcatagcccatcatggcaatgg 219 | ||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 38309 aataacagttgtcttatcctcatcagcatagcccaacatggcaatgg 38355 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 38059 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 38118 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctg 118 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||| Sbjct: 38119 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctg 38174
>dbj|AK121126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A08, full insert sequence Length = 3313 Score = 113 bits (57), Expect = 3e-22 Identities = 93/107 (86%) Strand = Plus / Minus Query: 113 aacctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactc 172 ||||||||||||||| ||||||||| ||||||| | |||||||||| || |||||||||| Sbjct: 1897 aacctgagcatatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactc 1838 Query: 173 cagaacagnggtcttgncctcctcagcatagcccatcatggcaatgg 219 | ||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1837 aataacagttgtcttatcctcatcagcatagcccaacatggcaatgg 1791 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 2087 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 2028 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctg 118 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||| Sbjct: 2027 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctg 1972
>dbj|AB050986.1| Oryza sativa (japonica cultivar-group) glx-I gene for glyoxalase I, complete cds Length = 4908 Score = 113 bits (57), Expect = 3e-22 Identities = 93/107 (86%) Strand = Plus / Minus Query: 113 aacctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactc 172 ||||||||||||||| ||||||||| ||||||| | |||||||||| || |||||||||| Sbjct: 3487 aacctgagcatatgcgttgcccttggtatattctgtgacaccatagttgtatgtcaactc 3428 Query: 173 cagaacagnggtcttgncctcctcagcatagcccatcatggcaatgg 219 | ||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 3427 aataacagttgtcttatcctcatcagcatagcccaacatggcaatgg 3381 Score = 111 bits (56), Expect = 1e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 3 gtgttcagccccggtagtggccctggctgccttagaatctttccacctagttctttggta 62 ||||| ||||| |||||||| |||||||||| | ||||||||| ||||||||||| ||| Sbjct: 3677 gtgttgagccctggtagtggacctggctgccgcaaaatctttccccctagttcttttgta 3618 Query: 63 accagctcaactgcttcggcgctcttgtacacatcgtcagtgccaatagcaacctg 118 |||| |||||| || || || |||||||| ||||| |||||||||||||||||||| Sbjct: 3617 accaactcaacagcctcagcactcttgtagacatcttcagtgccaatagcaacctg 3562
>emb|AJ243528.1|TAE243528 Triticum aestivum partial mRNA for putative glyoxalase I Length = 922 Score = 81.8 bits (41), Expect = 1e-12 Identities = 85/101 (84%) Strand = Plus / Minus Query: 78 tcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgcccttg 137 |||||| ||||||| |||||||| ||||| || || | ||| ||||||||||| |||||| Sbjct: 710 tcggcggtcttgtagacatcgtcggtgcctatcgcgatctgtgcatatgcattccccttg 651 Query: 138 ntatattccgngacaccatagntgnatgtcaactccagaac 178 |||||| | |||||||||| || | |||||||||||||| Sbjct: 650 tcatattcagtgacaccatagttgtaggtcaactccagaac 610
>emb|Z97064.1|CPDUNCAN Citrus paradisi mRNA for hypothetical protein Length = 1099 Score = 67.9 bits (34), Expect = 2e-08 Identities = 78/94 (82%) Strand = Plus / Minus Query: 87 ttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgcccttgntatattcc 146 ||||| ||||| ||||| | |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 715 ttgtatacatcatcagtactaatagcaacctgcgcatatgcatttcccttggtatattca 656 Query: 147 gngacaccatagntgnatgtcaactccagaacag 180 | |||||||| | | || ||||||||||||| Sbjct: 655 gtcacaccataattataagttaactccagaacag 622
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 1e-06 Identities = 57/67 (85%) Strand = Plus / Plus Query: 114 acctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactcc 173 ||||| ||||||||||| |||||| |||||| | |||||||||| || |||||| |||| Sbjct: 10378228 acctgggcatatgcattccccttgtcatattcagtgacaccatagttgtatgtcagctcc 10378287 Query: 174 agaacag 180 || |||| Sbjct: 10378288 agcacag 10378294
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 61.9 bits (31), Expect = 1e-06 Identities = 57/67 (85%) Strand = Plus / Plus Query: 114 acctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactcc 173 ||||| ||||||||||| |||||| |||||| | |||||||||| || |||||| |||| Sbjct: 20650 acctgggcatatgcattccccttgtcatattcagtgacaccatagttgtatgtcagctcc 20709 Query: 174 agaacag 180 || |||| Sbjct: 20710 agcacag 20716
>dbj|AK109512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-G08, full insert sequence Length = 3654 Score = 61.9 bits (31), Expect = 1e-06 Identities = 57/67 (85%) Strand = Plus / Plus Query: 114 acctgagcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactcc 173 ||||| ||||||||||| |||||| |||||| | |||||||||| || |||||| |||| Sbjct: 1845 acctgggcatatgcattccccttgtcatattcagtgacaccatagttgtatgtcagctcc 1904 Query: 174 agaacag 180 || |||| Sbjct: 1905 agcacag 1911
>dbj|AK058486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D09, full insert sequence Length = 529 Score = 58.0 bits (29), Expect = 2e-05 Identities = 52/61 (85%) Strand = Plus / Minus Query: 120 gcatatgcattgcccttgntatattccgngacaccatagntgnatgtcaactccagaaca 179 ||||||||||| |||||| |||||| | |||||||||| || |||||| |||||| ||| Sbjct: 62 gcatatgcattccccttgtcatattcagtgacaccatagttgtatgtcagctccagcaca 3 Query: 180 g 180 | Sbjct: 2 g 2
>ref|XM_476222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 56.0 bits (28), Expect = 7e-05 Identities = 78/96 (81%) Strand = Plus / Minus Query: 85 tcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgcccttgntatatt 144 ||||||| ||||| || |||| |||||||| ||| ||||| ||||| || || ||||| Sbjct: 637 tcttgtagacatcatctgtgctaatagcaatctgtgcataagcatttcctttatcatatt 578 Query: 145 ccgngacaccatagntgnatgtcaactccagaacag 180 || |||||||||| || | ||||||||||| |||| Sbjct: 577 ccttgacaccatagttgtaggtcaactccagtacag 542
>dbj|AK067996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127D21, full insert sequence Length = 1247 Score = 56.0 bits (28), Expect = 7e-05 Identities = 78/96 (81%) Strand = Plus / Minus Query: 85 tcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgcccttgntatatt 144 ||||||| ||||| || |||| |||||||| ||| ||||| ||||| || || ||||| Sbjct: 721 tcttgtagacatcatctgtgctaatagcaatctgtgcataagcatttcctttatcatatt 662 Query: 145 ccgngacaccatagntgnatgtcaactccagaacag 180 || |||||||||| || | ||||||||||| |||| Sbjct: 661 ccttgacaccatagttgtaggtcaactccagtacag 626
>ref|NM_001035948.1| Arabidopsis thaliana ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase AT1G11840 (ATGLX1) transcript variant AT1G11840.4 mRNA, complete cds Length = 1272 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 776 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 722
>ref|NM_179313.2| Arabidopsis thaliana ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase AT1G11840 (ATGLX1) transcript variant AT1G11840.3 mRNA, complete cds Length = 1249 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 753 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 699
>ref|NM_179312.1| Arabidopsis thaliana ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase AT1G11840 (ATGLX1) transcript variant AT1G11840.2 mRNA, complete cds Length = 1250 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 754 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 700
>ref|NM_101055.2| Arabidopsis thaliana ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase AT1G11840 (ATGLX1) transcript variant AT1G11840.1 mRNA, complete cds Length = 1285 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 789 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 735
>gb|AY056148.1| Arabidopsis thaliana putative lactoylglutathione lyase (At1g11840) mRNA, complete cds Length = 1291 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 755 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 701
>gb|AY097360.1| Arabidopsis thaliana At1g11840/F12F1_32 mRNA, complete cds Length = 852 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 691 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 637
>gb|AY074569.1| Arabidopsis thaliana At1g11840/F12F1_32 mRNA, complete cds Length = 1121 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 754 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 700
>gb|AF428272.1|AF428272 Arabidopsis thaliana At1g11840/F12F1_32 mRNA, complete cds Length = 1181 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 754 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 700
>emb|BX813686.1|CNS0AC65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 863 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 495 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 441
>emb|BX816278.1|CNS0AAI7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1171 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 725 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 671
>gb|AY087874.1| Arabidopsis thaliana clone 39107 mRNA, complete sequence Length = 1216 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 789 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 735
>dbj|AB050553.1| Arabidopsis thaliana ATGLX1 mRNA for Glyoxalase I homolog, complete cds Length = 1181 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccctt 136 |||| ||||||||||| || ||||| || |||| ||| ||||||||||||||||| Sbjct: 754 cgcttttgtacacatcatctgtgcctattgcaatctgtgcatatgcattgccctt 700
>emb|Z74950.1|BO13G6IC B.oleracea mRNA (unknown) Length = 985 Score = 50.1 bits (25), Expect = 0.004 Identities = 52/61 (85%) Strand = Plus / Minus Query: 76 cttcggcgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcattgccct 135 |||| ||||| ||||||||||| || ||||| || |||| ||| |||||||| ||||||| Sbjct: 617 cttcagcgcttttgtacacatcatccgtgcctattgcaatctgtgcatatgcgttgccct 558 Query: 136 t 136 | Sbjct: 557 t 557
>emb|AL603782.5| Mouse DNA sequence from clone RP23-480M4 on chromosome 8, complete sequence Length = 175157 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 ttagaatctttccacctagttc 55 |||||||||||||||||||||| Sbjct: 91817 ttagaatctttccacctagttc 91838
>gb|AC159126.4| Mus musculus chromosome 8, clone RP23-182M11, complete sequence Length = 238838 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ttagaatctttccacctagttc 55 |||||||||||||||||||||| Sbjct: 194840 ttagaatctttccacctagttc 194819
>gb|AC166996.1| Mus musculus BAC clone RP23-268E1 from chromosome 12, complete sequence Length = 162710 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cctggctgccttagaatcttt 44 ||||||||||||||||||||| Sbjct: 123813 cctggctgccttagaatcttt 123833
>gb|AC157821.2| Mus musculus BAC clone RP24-476E8 from chromosome 12, complete sequence Length = 189341 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cctggctgccttagaatcttt 44 ||||||||||||||||||||| Sbjct: 22889 cctggctgccttagaatcttt 22909
>gb|AY168201.1| Capsella rubella putative lactoylglutathione lyase-like protein (GLX1) mRNA, partial cds Length = 168 Score = 42.1 bits (21), Expect = 1.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 82 cgctcttgtacacatcgtcagtgccaatagcaacctgagcatatgcatt 130 |||||||||||||||| ||||| || || |||| ||| ||||| ||||| Sbjct: 49 cgctcttgtacacatcatcagtacctattgcaatctgtgcatacgcatt 1
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 4.1 Identities = 35/41 (85%) Strand = Plus / Plus Query: 140 atattccgngacaccatagntgnatgtcaactccagaacag 180 ||||||| |||||||||| || | ||||||||||| |||| Sbjct: 46417 atattccttgacaccatagttgtaggtcaactccagtacag 46457
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.1 Identities = 35/41 (85%) Strand = Plus / Plus Query: 140 atattccgngacaccatagntgnatgtcaactccagaacag 180 ||||||| |||||||||| || | ||||||||||| |||| Sbjct: 7861642 atattccttgacaccatagttgtaggtcaactccagtacag 7861682
>emb|AL732616.3| Mouse DNA sequence from clone RP23-466D3 on chromosome 2, complete sequence Length = 123372 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tggccctggctgccttagaa 39 |||||||||||||||||||| Sbjct: 12916 tggccctggctgccttagaa 12935 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,190,011 Number of Sequences: 3902068 Number of extensions: 1190011 Number of successful extensions: 18048 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17978 Number of HSP's gapped (non-prelim): 70 length of query: 311 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 289 effective length of database: 17,147,199,772 effective search space: 4955540734108 effective search space used: 4955540734108 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)