Clone Name	rbags11g01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	5e-94
2	dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	5e-94
3	dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b m...	353	5e-94
4	ref|XM_464508.1| Oryza sativa (japonica cultivar-group), mRNA	280	6e-72
5	dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clon...	280	6e-72
6	dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clon...	280	6e-72
7	dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clon...	280	6e-72
8	dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mR...	280	6e-72
9	gb|AY112008.1| Zea mays CL39798_1 mRNA sequence	274	3e-70
10	gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence	224	3e-55
11	gb|AY109445.1| Zea mays CL337_1 mRNA sequence	202	1e-48
12	gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subun...	149	1e-32
13	dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasom...	149	1e-32
14	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	147	5e-32
15	dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D...	147	5e-32
16	dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D...	147	5e-32
17	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
18	dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
19	dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
20	ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (R...	125	2e-25
21	gb|BT017713.1| Zea mays clone EL01N0446G05.c mRNA sequence	125	2e-25
22	gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, comp...	125	2e-25
23	gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mR...	125	2e-25
24	gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-A...	125	2e-25
25	dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-reg...	121	3e-24
26	dbj|AK220732.1| Arabidopsis thaliana mRNA for 26S proteasome AAA...	117	5e-23
27	emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Co...	117	5e-23
28	gb|AY241962.1| Dermacentor variabilis 26S proteasome regulatory ...	88	4e-14
29	ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydr...	68	4e-08
30	gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s...	68	4e-08
31	gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase su...	68	4e-08
32	gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AA...	68	4e-08
33	ref|NM_132080.2| Drosophila melanogaster Rpt4 CG3455-RA (Rpt4), ...	66	2e-07
34	gb|AF145310.1|AF145310 Drosophila melanogaster 26S proteasome re...	66	2e-07
35	gb|AF024493.1| Caenorhabditis elegans cosmid F23F1, complete seq...	64	6e-07
36	ref|NM_001026943.2| Caenorhabditis elegans proteasome Regulatory...	64	6e-07
37	ref|NM_001026942.2| Caenorhabditis elegans proteasome Regulatory...	64	6e-07
38	dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	64	6e-07
39	ref|XM_812559.1| Trypanosoma cruzi strain CL Brener 26S protease...	62	2e-06
40	gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds	60	1e-05
41	emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Co...	60	1e-05
42	gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana...	60	1e-05
43	ref|XM_633449.1| Dictyostelium discoideum hypothetical protein (...	58	4e-05
44	emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph...	58	4e-05
45	gb|AY071182.1| Drosophila melanogaster RE23388 full length cDNA	58	4e-05
46	ref|XM_808730.1| Trypanosoma cruzi strain CL Brener 26S protease...	56	1e-04
47	gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell...	56	1e-04
48	gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell ...	56	1e-04
49	gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 ...	56	1e-04
50	ref|NM_140268.1| Drosophila melanogaster CG7257-RA (CG7257), mRNA	54	6e-04
51	gb|AC010698.7| Drosophila melanogaster 3L BAC RP98-15K18 (Roswel...	54	6e-04
52	gb|AY089267.1| Drosophila melanogaster AT06668 full insert cDNA	54	6e-04
53	gb|AE003543.4| Drosophila melanogaster chromosome 3L, section 42...	54	6e-04
54	gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co...	50	0.009
55	gb|AY348236.1| Drosophila bipolita RPT4 (Rpt4) gene, partial cds	48	0.037
56	gb|AY348235.1| Drosophila canipolita RPT4 (Rpt4) gene, partial cds	48	0.037
57	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	48	0.037
58	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	48	0.037
59	ref|XM_813585.1| Trypanosoma cruzi strain CL Brener transitional...	46	0.14
60	ref|XM_962695.1| PREDICTED: Tribolium castaneum similar to CG345...	46	0.14
61	gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete se...	44	0.57
62	emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in ...	44	0.57
63	emb|CR731783.2|CNS0GRL8 Tetraodon nigroviridis full-length cDNA	44	0.57
64	emb|CR731667.2|CNS0GRI0 Tetraodon nigroviridis full-length cDNA	44	0.57
65	emb|CR728890.2|CNS0GPCW Tetraodon nigroviridis full-length cDNA	44	0.57
66	emb|CR727745.2|CNS0GOH3 Tetraodon nigroviridis full-length cDNA	44	0.57
67	emb|CR727398.2|CNS0GO7G Tetraodon nigroviridis full-length cDNA	44	0.57
68	emb|CR685292.1|CNS0FRQ0 Tetraodon nigroviridis full-length cDNA	44	0.57
69	emb|CR679775.2|CNS0FNGR Tetraodon nigroviridis full-length cDNA	44	0.57
70	emb|CR679558.2|CNS0FNAQ Tetraodon nigroviridis full-length cDNA	44	0.57
71	emb|CR676800.2|CNS0FL6K Tetraodon nigroviridis full-length cDNA	44	0.57
72	emb|CR675817.2|CNS0FKFJ Tetraodon nigroviridis full-length cDNA	44	0.57
73	emb|CR675913.1|CNS0FKI7 Tetraodon nigroviridis full-length cDNA	44	0.57
74	emb|CR675385.2|CNS0FK3J Tetraodon nigroviridis full-length cDNA	44	0.57
75	emb|CR674301.2|CNS0FJ9F Tetraodon nigroviridis full-length cDNA	44	0.57
76	emb|CR672027.2|CNS0FHI9 Tetraodon nigroviridis full-length cDNA	44	0.57
77	emb|CR671714.2|CNS0FH9K Tetraodon nigroviridis full-length cDNA	44	0.57
78	emb|CR670430.2|CNS0FG9W Tetraodon nigroviridis full-length cDNA	44	0.57
79	emb|CR667294.2|CNS0FDUS Tetraodon nigroviridis full-length cDNA	44	0.57
80	emb|CR666785.2|CNS0FDGN Tetraodon nigroviridis full-length cDNA	44	0.57
81	emb|CR666640.2|CNS0FDCM Tetraodon nigroviridis full-length cDNA	44	0.57
82	emb|CR664610.2|CNS0FBS8 Tetraodon nigroviridis full-length cDNA	44	0.57
83	emb|CR665620.2|CNS0FCKA Tetraodon nigroviridis full-length cDNA	44	0.57
84	emb|CR665248.2|CNS0FC9Y Tetraodon nigroviridis full-length cDNA	44	0.57
85	emb|CR660805.2|CNS0F8UJ Tetraodon nigroviridis full-length cDNA	44	0.57
86	emb|CR659548.2|CNS0F7VM Tetraodon nigroviridis full-length cDNA	44	0.57
87	emb|CR658573.2|CNS0F74J Tetraodon nigroviridis full-length cDNA	44	0.57
88	emb|CR657800.2|CNS0F6J2 Tetraodon nigroviridis full-length cDNA	44	0.57
89	emb|CR657024.2|CNS0F5XI Tetraodon nigroviridis full-length cDNA	44	0.57
90	gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq...	42	2.3
91	dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl...	42	2.3
92	gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	42	2.3
93	ref|NM_207919.1| Eremothecium gossypii AAR025Cp (AAR025C), mRNA	42	2.3
94	ref|NM_129998.2| Arabidopsis thaliana ATCS; citrate (SI)-synthas...	40	8.9
95	ref|NM_180084.1| Arabidopsis thaliana ATCS; citrate (SI)-synthas...	40	8.9
96	gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence	40	8.9
97	gb|AC008146.10| Trypanosoma brucei chromosome 6 clone RPCI93-30P...	40	8.9
98	gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosom...	40	8.9
99	gb|BC073644.1| Xenopus laevis similar to proteasome 26S ATPase s...	40	8.9
100	gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome	40	8.9
101	gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome...	40	8.9
102	gb|BC045087.1| Xenopus laevis similar to proteasome 26S ATPase s...	40	8.9
103	emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chro...	40	8.9
104	ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predi...	40	8.9
105	emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chr...	40	8.9
106	emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 ...	40	8.9
107	ref|NM_200862.1| Danio rerio zgc:77855 (zgc:77855), mRNA	40	8.9
108	dbj|AK163154.1| Mus musculus 7 days neonate cerebellum cDNA, RIK...	40	8.9
109	gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome	40	8.9
110	gb|BT006613.1| Arabidopsis thaliana At2g44350 mRNA, complete cds	40	8.9
111	gb|AF387018.1|AF387018 Arabidopsis thaliana citrate synthase (At...	40	8.9
112	emb|BX819934.1|CNS0A8H8 Arabidopsis thaliana Full-length cDNA Co...	40	8.9
113	emb|BX819782.1|CNS0A8I6 Arabidopsis thaliana Full-length cDNA Co...	40	8.9
114	emb|BX819832.1|CNS0A7W8 Arabidopsis thaliana Full-length cDNA Co...	40	8.9
115	gb|AY208828.1| Rhipicephalus appendiculatus proteasome-like prot...	40	8.9
116	gb|AY085647.1| Arabidopsis thaliana clone 16528 mRNA, complete s...	40	8.9
117	emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chr...	40	8.9
118	gb|BC062862.1| Danio rerio zgc:77855, mRNA (cDNA clone MGC:77855...	40	8.9
119	emb|BX927255.9| Zebrafish DNA sequence from clone CH211-266I18 i...	40	8.9
120	emb|BX537272.5| Zebrafish DNA sequence from clone DKEY-25E12 in ...	40	8.9
121	gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374...	40	8.9
122	gb|AE015925.1| Chlamydophila caviae GPIC, complete genome	40	8.9
123	emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1...	40	8.9
124	emb|AL049849.1|HSB1L1C6 Homo sapiens chromosome 21 BAC B1L1C6, c...	40	8.9
125	emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chr...	40	8.9

---

>dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G13, full
            insert sequence
          Length = 1556

 Score =  353 bits (178), Expect = 5e-94
 Identities = 334/386 (86%)
 Strand = Plus / Minus

                                                                        
Query: 262  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1307 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1248

                                                                        
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1247 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1188

                                                                        
Query: 382  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1187 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 1128

                                                                        
Query: 442  ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
            || || ||||| || ||||| ||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 1127 ttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaattttg 1068

                                                                        
Query: 502  aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
            ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  || 
Sbjct: 1067 aggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaaccgc 1008

                                                                        
Query: 562  ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
            |||||||||||||| ||||| ||||| ||||||||||| || |||||||||||||| || 
Sbjct: 1007 ccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcattttt 948

                                      
Query: 622  acctttccaagctcatcgaatccatc 647
            ||||||||||||||||| ||||||||
Sbjct: 947  acctttccaagctcatcaaatccatc 922

---

>dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C12, full
            insert sequence
          Length = 1695

 Score =  353 bits (178), Expect = 5e-94
 Identities = 334/386 (86%)
 Strand = Plus / Minus

                                                                        
Query: 262  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1310 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1251

                                                                        
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1250 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1191

                                                                        
Query: 382  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1190 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 1131

                                                                        
Query: 442  ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
            || || ||||| || ||||| ||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 1130 ttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaattttg 1071

                                                                        
Query: 502  aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
            ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  || 
Sbjct: 1070 aggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaaccgc 1011

                                                                        
Query: 562  ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
            |||||||||||||| ||||| ||||| ||||||||||| || |||||||||||||| || 
Sbjct: 1010 ccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcattttt 951

                                      
Query: 622  acctttccaagctcatcgaatccatc 647
            ||||||||||||||||| ||||||||
Sbjct: 950  acctttccaagctcatcaaatccatc 925

---

>dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b mRNA for 26S
            proteasome regulatory particle triple-A ATPase subunit4b,
            partial cds
          Length = 1390

 Score =  353 bits (178), Expect = 5e-94
 Identities = 334/386 (86%)
 Strand = Plus / Minus

                                                                        
Query: 262  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1131 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1072

                                                                        
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1071 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1012

                                                                        
Query: 382  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1011 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 952

                                                                        
Query: 442  ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
            || || ||||| || ||||| ||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 951  ttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaattttg 892

                                                                        
Query: 502  aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
            ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  || 
Sbjct: 891  aggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaaccgc 832

                                                                        
Query: 562  ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
            |||||||||||||| ||||| ||||| ||||||||||| || |||||||||||||| || 
Sbjct: 831  ccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcattttt 772

                                      
Query: 622  acctttccaagctcatcgaatccatc 647
            ||||||||||||||||| ||||||||
Sbjct: 771  acctttccaagctcatcaaatccatc 746

---

>ref|XM_464508.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1693

 Score =  280 bits (141), Expect = 6e-72
 Identities = 318/377 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 330
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1267 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1208

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1207 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1148

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1147 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1088

                                                                        
Query: 451  gcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctcc 510
            ||||| ||||||||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct: 1087 gcctcataatcaatttctccatgcttggcaataccagcagcatggattttaagaacttcc 1028

                                                                        
Query: 511  gtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacga 570
             | || | ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| 
Sbjct: 1027 attcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgtccaggacgc 968

                                                                        
Query: 571  aggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacctttcca 630
            || |||||||| ||||  |||||||| |  || || ||||||||||| ||||||||||||
Sbjct: 967  agtagcgcagggtccagaacatcaggtctattggtagccatgatcattttcacctttcca 908

                             
Query: 631  agctcatcgaatccatc 647
            || ||||| ||||||||
Sbjct: 907  agttcatcaaatccatc 891

---

>dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C01, full
           insert sequence
          Length = 1326

 Score =  280 bits (141), Expect = 6e-72
 Identities = 318/377 (84%)
 Strand = Plus / Minus

                                                                       
Query: 271 aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 330
           ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 900 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 841

                                                                       
Query: 331 gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
           |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 840 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 781

                                                                       
Query: 391 gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
           || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 780 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 721

                                                                       
Query: 451 gcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctcc 510
           ||||| ||||||||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct: 720 gcctcataatcaatttctccatgcttggcaataccagcagcatggattttaagaacttcc 661

                                                                       
Query: 511 gtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacga 570
            | || | ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| 
Sbjct: 660 attcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgtccaggacgc 601

                                                                       
Query: 571 aggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacctttcca 630
           || |||||||| ||||  |||||||| |  || || ||||||||||| ||||||||||||
Sbjct: 600 agtagcgcagggtccagaacatcaggtctattggtagccatgatcattttcacctttcca 541

                            
Query: 631 agctcatcgaatccatc 647
           || ||||| ||||||||
Sbjct: 540 agttcatcaaatccatc 524

---

>dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G07, full
            insert sequence
          Length = 1692

 Score =  280 bits (141), Expect = 6e-72
 Identities = 318/377 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 330
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1266 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1207

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1206 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1147

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1146 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1087

                                                                        
Query: 451  gcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctcc 510
            ||||| ||||||||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct: 1086 gcctcataatcaatttctccatgcttggcaataccagcagcatggattttaagaacttcc 1027

                                                                        
Query: 511  gtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacga 570
             | || | ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| 
Sbjct: 1026 attcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgtccaggacgc 967

                                                                        
Query: 571  aggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacctttcca 630
            || |||||||| ||||  |||||||| |  || || ||||||||||| ||||||||||||
Sbjct: 966  agtagcgcagggtccagaacatcaggtctattggtagccatgatcattttcacctttcca 907

                             
Query: 631  agctcatcgaatccatc 647
            || ||||| ||||||||
Sbjct: 906  agttcatcaaatccatc 890

---

>dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H06, full
            insert sequence
          Length = 1718

 Score =  280 bits (141), Expect = 6e-72
 Identities = 318/377 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 330
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1349 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1290

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1289 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1230

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1229 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1170

                                                                        
Query: 451  gcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctcc 510
            ||||| ||||||||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct: 1169 gcctcataatcaatttctccatgcttggcaataccagcagcatggattttaagaacttcc 1110

                                                                        
Query: 511  gtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacga 570
             | || | ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| 
Sbjct: 1109 attcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgtccaggacgc 1050

                                                                        
Query: 571  aggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacctttcca 630
            || |||||||| ||||  |||||||| |  || || ||||||||||| ||||||||||||
Sbjct: 1049 agtagcgcagggtccagaacatcaggtctattggtagccatgatcattttcacctttcca 990

                             
Query: 631  agctcatcgaatccatc 647
            || ||||| ||||||||
Sbjct: 989  agttcatcaaatccatc 973

---

>dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mRNA for 26S proteasome
            regulatory particle triple-A ATPase subunit4, complete
            cds
          Length = 1637

 Score =  280 bits (141), Expect = 6e-72
 Identities = 318/377 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 330
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1267 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1208

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1207 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1148

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1147 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1088

                                                                        
Query: 451  gcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctcc 510
            ||||| ||||||||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct: 1087 gcctcataatcaatttctccatgcttggcaataccagcagcatggattttaagaacttcc 1028

                                                                        
Query: 511  gtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacga 570
             | || | ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| 
Sbjct: 1027 attcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgtccaggacgc 968

                                                                        
Query: 571  aggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacctttcca 630
            || |||||||| ||||  |||||||| |  || || ||||||||||| ||||||||||||
Sbjct: 967  agtagcgcagggtccagaacatcaggtctattggtagccatgatcattttcacctttcca 908

                             
Query: 631  agctcatcgaatccatc 647
            || ||||| ||||||||
Sbjct: 907  agttcatcaaatccatc 891

---

>gb|AY112008.1| Zea mays CL39798_1 mRNA sequence
          Length = 728

 Score =  274 bits (138), Expect = 3e-70
 Identities = 324/386 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
           ||||| || ||||| |||||||||||||| |||||||||||||||||||| |||||||  
Sbjct: 257 tccttgccgaagtcagcactgtagtgcgcactggactcgagcttcttggcatcattcagc 316

                                                                       
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
           || ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| || |||
Sbjct: 317 ttgcgcacagccttcatgaagtcctcgtgaatgacatagtcacgctccgctcggatagca 376

                                                                       
Query: 382 gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
           |||||||| || || ||||| |  ||||| | |||||| |||||||||||||| || || 
Sbjct: 377 gccatgccggcttctgtgcacaagttgcgcatatcggctccattgaagccctcagctagt 436

                                                                       
Query: 442 ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
           || || ||||| || || ||||| || |||||||| ||||| ||||| ||||| || || 
Sbjct: 437 ttgactacagcttcatagtcaatctccccatgctttgcgatgccagctgcatgaatcttg 496

                                                                       
Query: 502 aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
           ||||||||| ||||   ||| |||||||| || || ||||| ||||| ||||| |  || 
Sbjct: 497 aggacctccatcctcccttggtcattcggcagtgggatctcgatcttcctgtccaaccga 556

                                                                       
Query: 562 ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
           ||||| |||||||| ||||||||||| |||||||| ||||| || ||||||||||| |||
Sbjct: 557 ccaggtcgaaggagtgcaggatccaaaacatcaggccggttggttgccatgatcattttc 616

                                     
Query: 622 acctttccaagctcatcgaatccatc 647
           ||||| ||||||||||||||||||||
Sbjct: 617 accttcccaagctcatcgaatccatc 642

---

>gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence
          Length = 1608

 Score =  224 bits (113), Expect = 3e-55
 Identities = 266/317 (83%)
 Strand = Plus / Minus

                                                                        
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 1175 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 1116

                                                                        
Query: 382  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
            ||||| ||||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 1115 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaaaccttcagctagt 1056

                                                                        
Query: 442  ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
            || || || || || ||||||||||| |||||||| || |||||||| ||||||||||| 
Sbjct: 1055 ttcacgactgcttcataatcaatttccccatgcttggcaataccagctgcatggattttt 996

                                                                        
Query: 502  aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
            || || ||| | || |||||||| || ||||||||||| || ||||| |||||||  |||
Sbjct: 995  agaacttccattcttgattgctcgttgggtagcggaatttcaatcttcctgtctaaacgt 936

                                                                        
Query: 562  ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
            |||||||| ||||||||||| ||||  |||||||| || ||||| |||||||||||||| 
Sbjct: 935  ccaggacgcaggagcgcagggtccagaacatcaggtcgattcgtggccatgatcatcttt 876

                             
Query: 622  acctttccaagctcatc 638
            |||||||| ||||||||
Sbjct: 875  acctttccgagctcatc 859

---

>gb|AY109445.1| Zea mays CL337_1 mRNA sequence
          Length = 2107

 Score =  202 bits (102), Expect = 1e-48
 Identities = 266/318 (83%), Gaps = 2/318 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 1589 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 1530

                                                                        
Query: 382  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
            ||||| ||||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 1529 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaaaccttcagctagt 1470

                                                                        
Query: 442  ttaaccacagcctcgtaatcaa-tttcaccatgcttagcgataccagccgcatggatttt 500
            ||| | || || || ||||||| |||| |||||||| || |||||||| |||||||||||
Sbjct: 1469 tta-cgactgcttcataatcaaatttccccatgcttggcaataccagctgcatggatttt 1411

                                                                        
Query: 501  caggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcg 560
             || || ||| | || |||||||| || ||||||||||| || ||||| |||||||  ||
Sbjct: 1410 aagaacttccattcttgattgctcgttgggtagcggaatttcaatcttcctgtctaaacg 1351

                                                                        
Query: 561  tccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatctt 620
            ||||||||| ||||||||||| ||||  |||||||| || ||||| ||||||||||||||
Sbjct: 1350 tccaggacgcaggagcgcagggtccagaacatcaggtcgattcgtggccatgatcatctt 1291

                              
Query: 621  cacctttccaagctcatc 638
             |||||||| ||||||||
Sbjct: 1290 tacctttccgagctcatc 1273

---

>gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subunit RPT4a-like
            protein mRNA, complete cds
          Length = 1567

 Score =  149 bits (75), Expect = 1e-32
 Identities = 315/395 (79%)
 Strand = Plus / Minus

                                                                        
Query: 257  cttagtccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcat 316
            |||| ||||||||||| || ||||||||||| || || || || || ||||| || ||||
Sbjct: 1267 cttattccttaccaaaatcagcactgtagtgagcacttgattcaagtttctttgcttcat 1208

                                                                        
Query: 317  tcaatttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaa 376
            ||| |||||  || ||||||||||| || || |||||||| || ||||||||||| ||||
Sbjct: 1207 tcagtttccttacagccttcatgaaatcctcatggatgacataatcacgctctgcacgaa 1148

                                                                        
Query: 377  tggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcgg 436
            | |||  ||| || || |||||||| ||||| || | ||| || ||||| || ||||| |
Sbjct: 1147 ttgcaaacataccggcttcagtgcaaacattccgcatatcagccccattaaatccctcag 1088

                                                                        
Query: 437  caagcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatgga 496
            | |||||||   ||||||| ||||||||||||||||| || || || ||||| |||||||
Sbjct: 1087 cgagcttaatagcagcctcataatcaatttcaccatgtttggcaatcccagcagcatgga 1028

                                                                        
Query: 497  ttttcaggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtcta 556
            | || ||||  ||| | || ||||| ||||| || |  || || ||||||||||| ||||
Sbjct: 1027 tcttgaggatttccattcttgattgttcattaggcaagggtatttctatctttctatcta 968

                                                                        
Query: 557  ggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatca 616
              || ||||||||||| || || || ||||| |||||||| |  || || ||||| ||||
Sbjct: 967  atcgaccaggacgaagaagagctgggtccaaaacatcaggtctatttgttgccataatca 908

                                               
Query: 617  tcttcacctttccaagctcatcgaatccatccaac 651
            | || |||||||||||||  || ||||||||||||
Sbjct: 907  tttttacctttccaagctggtcaaatccatccaac 873

---

>dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasome AAA-ATPase subunit
            RPT4a, complete cds
          Length = 1484

 Score =  149 bits (75), Expect = 1e-32
 Identities = 315/395 (79%)
 Strand = Plus / Minus

                                                                        
Query: 257  cttagtccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcat 316
            |||| ||||||||||| || ||||||||||| || || || || || ||||| || ||||
Sbjct: 1255 cttattccttaccaaaatcagcactgtagtgagcacttgattcaagtttctttgcttcat 1196

                                                                        
Query: 317  tcaatttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaa 376
            ||| |||||  || ||||||||||| || || |||||||| || ||||||||||| ||||
Sbjct: 1195 tcagtttccttacagccttcatgaaatcctcatggatgacataatcacgctctgcacgaa 1136

                                                                        
Query: 377  tggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcgg 436
            | |||  ||| || || |||||||| ||||| || | ||| || ||||| || ||||| |
Sbjct: 1135 ttgcaaacataccggcttcagtgcaaacattccgcatatcagccccattaaatccctcag 1076

                                                                        
Query: 437  caagcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatgga 496
            | |||||||   ||||||| ||||||||||||||||| || || || ||||| |||||||
Sbjct: 1075 cgagcttaatagcagcctcataatcaatttcaccatgtttggcaatcccagcagcatgga 1016

                                                                        
Query: 497  ttttcaggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtcta 556
            | || ||||  ||| | || ||||| ||||| || |  || || ||||||||||| ||||
Sbjct: 1015 tcttgaggatttccattcttgattgttcattaggcaagggtatttctatctttctatcta 956

                                                                        
Query: 557  ggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatca 616
              || ||||||||||| || || || ||||| |||||||| |  || || ||||| ||||
Sbjct: 955  atcgaccaggacgaagaagagctgggtccaaaacatcaggtctatttgttgccataatca 896

                                               
Query: 617  tcttcacctttccaagctcatcgaatccatccaac 651
            | || |||||||||||||  || ||||||||||||
Sbjct: 895  tttttacctttccaagctggtcaaatccatccaac 861

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                            
Query: 332      ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
                |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 23802386 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 23802327

                                                          
Query: 392      cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
                ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 23802326 cctcagtgcagacattgcgcagatcggcaccattgaagccct 23802285



 Score =  117 bits (59), Expect = 5e-23
 Identities = 149/179 (83%)
 Strand = Plus / Minus

                                                                            
Query: 439      agcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggatt 498
                ||||| || ||||| || ||||| ||||||||||| ||||| |||||||| || || |||
Sbjct: 23802207 agcttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaatt 23802148

                                                                            
Query: 499      ttcaggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctagg 558
                || ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  
Sbjct: 23802147 ttgaggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaac 23802088

                                                                           
Query: 559      cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcat 617
                || |||||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 23802087 cgcccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcat 23802029



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                            
Query: 262      tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
                ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 23802560 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 23802501

                             
Query: 322      ttccgcaccgcct 334
                || ||||||||||
Sbjct: 23802500 ttgcgcaccgcct 23802488



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 622      acctttccaagctcatcgaatccatc 647
                ||||||||||||||||| ||||||||
Sbjct: 23801456 acctttccaagctcatcaaatccatc 23801431

---

>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                          
Query: 332    ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
              |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 150462 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 150403

                                                        
Query: 392    cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
              ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 150402 cctcagtgcagacattgcgcagatcggcaccattgaagccct 150361



 Score =  117 bits (59), Expect = 5e-23
 Identities = 149/179 (83%)
 Strand = Plus / Minus

                                                                          
Query: 439    agcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggatt 498
              ||||| || ||||| || ||||| ||||||||||| ||||| |||||||| || || |||
Sbjct: 150283 agcttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaatt 150224

                                                                          
Query: 499    ttcaggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctagg 558
              || ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  
Sbjct: 150223 ttgaggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaac 150164

                                                                         
Query: 559    cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcat 617
              || |||||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 150163 cgcccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcat 150105



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                          
Query: 262    tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
              ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 150636 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 150577

                           
Query: 322    ttccgcaccgcct 334
              || ||||||||||
Sbjct: 150576 ttgcgcaccgcct 150564



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 622    acctttccaagctcatcgaatccatc 647
              ||||||||||||||||| ||||||||
Sbjct: 149532 acctttccaagctcatcaaatccatc 149507

---

>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score =  147 bits (74), Expect = 5e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                         
Query: 332   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
             |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 42051 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 41992

                                                       
Query: 392   cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
             ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 41991 cctcagtgcagacattgcgcagatcggcaccattgaagccct 41950



 Score =  117 bits (59), Expect = 5e-23
 Identities = 149/179 (83%)
 Strand = Plus / Minus

                                                                         
Query: 439   agcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggatt 498
             ||||| || ||||| || ||||| ||||||||||| ||||| |||||||| || || |||
Sbjct: 41872 agcttcacgacagcttcataatcgatttcaccatgtttagcaataccagctgcgtgaatt 41813

                                                                         
Query: 499   ttcaggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctagg 558
             || ||||| ||| |||| || |||||||| || || ||||| || ||||| ||||| |  
Sbjct: 41812 ttgaggacttccatcctcgactgctcatttggcagtggaatttcaatcttcctgtccaac 41753

                                                                        
Query: 559   cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcat 617
             || |||||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 41752 cgcccaggacgaaggagtgcagggtccaaaacatcaggacgattagtcgccatgatcat 41694



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                         
Query: 262   tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 321
             ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 42225 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 42166

                          
Query: 322   ttccgcaccgcct 334
             || ||||||||||
Sbjct: 42165 ttgcgcaccgcct 42153



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 622   acctttccaagctcatcgaatccatc 647
             ||||||||||||||||| ||||||||
Sbjct: 41121 acctttccaagctcatcaaatccatc 41096

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Plus

                                                                           
Query: 442     ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
               ||||| || ||||| ||||||||||| |||||||| || |||||||| ||||||||||| 
Sbjct: 5596146 ttaacaactgcctcataatcaatttctccatgcttggcaataccagcagcatggatttta 5596205

                                                                           
Query: 502     aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
               || || ||| | || | ||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 5596206 agaacttccattcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgt 5596265

                                                                           
Query: 562     ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
               |||||||| || |||||||| ||||  |||||||| |  || || ||||||||||| |||
Sbjct: 5596266 ccaggacgcagtagcgcagggtccagaacatcaggtctattggtagccatgatcattttc 5596325

                   
Query: 622     acct 625
               ||||
Sbjct: 5596326 acct 5596329



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                           
Query: 332     ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
               ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 5595972 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 5596031

                                                         
Query: 392     cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
               | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 5596032 cttcagtgcagacgttgcgaagatcagccccattgaagccct 5596073



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                
Query: 271     aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 319
               ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 5595826 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 5595874

---

>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0026H03
          Length = 151827

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Plus

                                                                          
Query: 442    ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
              ||||| || ||||| ||||||||||| |||||||| || |||||||| ||||||||||| 
Sbjct: 140881 ttaacaactgcctcataatcaatttctccatgcttggcaataccagcagcatggatttta 140940

                                                                          
Query: 502    aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
              || || ||| | || | ||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 140941 agaacttccattcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgt 141000

                                                                          
Query: 562    ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
              |||||||| || |||||||| ||||  |||||||| |  || || ||||||||||| |||
Sbjct: 141001 ccaggacgcagtagcgcagggtccagaacatcaggtctattggtagccatgatcattttc 141060

                  
Query: 622    acct 625
              ||||
Sbjct: 141061 acct 141064



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                          
Query: 332    ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
              ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 140707 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 140766

                                                        
Query: 392    cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
              | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 140767 cttcagtgcagacgttgcgaagatcagccccattgaagccct 140808



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 271    aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 319
              ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 140561 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 140609

---

>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Plus

                                                                         
Query: 442   ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttc 501
             ||||| || ||||| ||||||||||| |||||||| || |||||||| ||||||||||| 
Sbjct: 23882 ttaacaactgcctcataatcaatttctccatgcttggcaataccagcagcatggatttta 23941

                                                                         
Query: 502   aggacctccgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgt 561
             || || ||| | || | ||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 23942 agaacttccattcttgcttgctcatttggtagcggaatctcaatcttcctgtctagacgt 24001

                                                                         
Query: 562   ccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttc 621
             |||||||| || |||||||| ||||  |||||||| |  || || ||||||||||| |||
Sbjct: 24002 ccaggacgcagtagcgcagggtccagaacatcaggtctattggtagccatgatcattttc 24061

                 
Query: 622   acct 625
             ||||
Sbjct: 24062 acct 24065



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                         
Query: 332   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
             ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 23708 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 23767

                                                       
Query: 392   cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
             | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 23768 cttcagtgcagacgttgcgaagatcagccccattgaagccct 23809



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 271   aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 319
             ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 23562 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 23610

---

>ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (RPT4A) mRNA, complete
            cds
          Length = 1505

 Score =  125 bits (63), Expect = 2e-25
 Identities = 276/347 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1295 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1236

                                                                        
Query: 343  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1235 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1176

                                                                        
Query: 403  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1175 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1116

                                                                        
Query: 463  atttcaccatgcttagcgataccagccgcatggattttcaggacctccgtcctggattgc 522
            ||||||||||| || ||||||||||| |||||||| || || |  ||| | || || |||
Sbjct: 1115 atttcaccatgtttggcgataccagctgcatggatcttaagaatatccattcttgactgc 1056

                                                                        
Query: 523  tcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgcagga 582
            || || || |  || ||||| |||||||| ||||  | ||| ||||| || |||||||||
Sbjct: 1055 tcgtttggcaaagggatctcaatctttctatctaaccttcccggacggagaagcgcagga 996

                                                           
Query: 583  tccaagacatcaggacggttcgtcgccatgatcatcttcacctttcc 629
            || |  |||||||| | ||| || ||||| ||||| |||||||||||
Sbjct: 995  tcaagcacatcaggcctgtttgtggccattatcattttcacctttcc 949

---

>gb|BT017713.1| Zea mays clone EL01N0446G05.c mRNA sequence
          Length = 635

 Score =  125 bits (63), Expect = 2e-25
 Identities = 150/179 (83%)
 Strand = Plus / Minus

                                                                       
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
           |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 220 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 161

                                                                       
Query: 382 gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 441
           ||||| ||||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 160 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaaaccttcagctagt 101

                                                                      
Query: 442 ttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccgcatggatttt 500
           || || || || || ||||||||||| |||||||| || |||||||| |||||||||||
Sbjct: 100 ttcacgactgcttcataatcaatttccccatgcttggcaataccagctgcatggatttt 42

---

>gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1200

 Score =  125 bits (63), Expect = 2e-25
 Identities = 276/347 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1175 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1116

                                                                        
Query: 343  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1115 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1056

                                                                        
Query: 403  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1055 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 996

                                                                        
Query: 463  atttcaccatgcttagcgataccagccgcatggattttcaggacctccgtcctggattgc 522
            ||||||||||| || ||||||||||| |||||||| || || |  ||| | || || |||
Sbjct: 995  atttcaccatgtttggcgataccagctgcatggatcttaagaatatccattcttgactgc 936

                                                                        
Query: 523  tcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgcagga 582
            || || || |  || ||||| |||||||| ||||  | ||| ||||| || |||||||||
Sbjct: 935  tcgtttggcaaagggatctcaatctttctatctaaccttcccggacggagaagcgcagga 876

                                                           
Query: 583  tccaagacatcaggacggttcgtcgccatgatcatcttcacctttcc 629
            || |  |||||||| | ||| || ||||| ||||| |||||||||||
Sbjct: 875  tcaagcacatcaggcctgtttgtggccattatcattttcacctttcc 829

---

>gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1508

 Score =  125 bits (63), Expect = 2e-25
 Identities = 276/347 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1295 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1236

                                                                        
Query: 343  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1235 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1176

                                                                        
Query: 403  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1175 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1116

                                                                        
Query: 463  atttcaccatgcttagcgataccagccgcatggattttcaggacctccgtcctggattgc 522
            ||||||||||| || ||||||||||| |||||||| || || |  ||| | || || |||
Sbjct: 1115 atttcaccatgtttggcgataccagctgcatggatcttaagaatatccattcttgactgc 1056

                                                                        
Query: 523  tcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgcagga 582
            || || || |  || ||||| |||||||| ||||  | ||| ||||| || |||||||||
Sbjct: 1055 tcgtttggcaaagggatctcaatctttctatctaaccttcccggacggagaagcgcagga 996

                                                           
Query: 583  tccaagacatcaggacggttcgtcgccatgatcatcttcacctttcc 629
            || |  |||||||| | ||| || ||||| ||||| |||||||||||
Sbjct: 995  tcaagcacatcaggcctgtttgtggccattatcattttcacctttcc 949

---

>gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a (RPT4a)
            mRNA, complete cds
          Length = 1360

 Score =  125 bits (63), Expect = 2e-25
 Identities = 276/347 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1183 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1124

                                                                        
Query: 343  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1123 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1064

                                                                        
Query: 403  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1063 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1004

                                                                        
Query: 463  atttcaccatgcttagcgataccagccgcatggattttcaggacctccgtcctggattgc 522
            ||||||||||| || ||||||||||| |||||||| || || |  ||| | || || |||
Sbjct: 1003 atttcaccatgtttggcgataccagctgcatggatcttaagaatatccattcttgactgc 944

                                                                        
Query: 523  tcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgcagga 582
            || || || |  || ||||| |||||||| ||||  | ||| ||||| || |||||||||
Sbjct: 943  tcgtttggcaaagggatctcaatctttctatctaaccttcccggacggagaagcgcagga 884

                                                           
Query: 583  tccaagacatcaggacggttcgtcgccatgatcatcttcacctttcc 629
            || |  |||||||| | ||| || ||||| ||||| |||||||||||
Sbjct: 883  tcaagcacatcaggcctgtttgtggccattatcattttcacctttcc 837

---

>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region
           associated with genomic hypomethylation, clone: O17
          Length = 1085

 Score =  121 bits (61), Expect = 3e-24
 Identities = 226/281 (80%)
 Strand = Plus / Plus

                                                                       
Query: 367 tctgctcgaatggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattg 426
           ||||| ||||| || | ||||||||||||||| || ||||| || || || || ||||||
Sbjct: 281 tctgcacgaatagctgacatgccagcctcagtacatacattacggaggtcagctccattg 340

                                                                       
Query: 427 aagccctcggcaagcttaaccacagcctcgtaatcaatttcaccatgcttagcgatacca 486
           |||||||| || |||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 341 aagccctctgcgagcttaacgacagcttcataatcaatctcaccatgttttgcaattcca 400

                                                                       
Query: 487 gccgcatggattttcaggacctccgtcctggattgctcattcggtagcggaatctctatc 546
           || ||||| ||||| || |  ||| |||| || |||||||| || |  || || ||||||
Sbjct: 401 gcagcatgaattttgagaatatccatcctcgactgctcatttggcaatggtatttctatc 460

                                                                       
Query: 547 tttctgtctaggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtc 606
           || |||||||| || || |||||||| || |||||||| |  |||||||| ||||| || 
Sbjct: 461 ttcctgtctagacgacccggacgaagaagtgcaggatcaagaacatcaggccggtttgtt 520

                                                    
Query: 607 gccatgatcatcttcacctttccaagctcatcgaatccatc 647
           ||||| ||||| || ||||| ||||||| ||| || |||||
Sbjct: 521 gccataatcatttttaccttgccaagctgatcaaacccatc 561

---

>dbj|AK220732.1| Arabidopsis thaliana mRNA for 26S proteasome AAA-ATPase subunit
           RPT4a, complete cds, clone: RAFL22-07-L12
          Length = 547

 Score =  117 bits (59), Expect = 5e-23
 Identities = 176/215 (81%)
 Strand = Plus / Minus

                                                                       
Query: 283 tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
           |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 248 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 189

                                                                       
Query: 343 tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
           ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 188 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 129

                                                                       
Query: 403 acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
           |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 128 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 69

                                              
Query: 463 atttcaccatgcttagcgataccagccgcatggat 497
           ||||||||||| || ||||||||||| ||||||||
Sbjct: 68  atttcaccatgtttggcgataccagctgcatggat 34

---

>emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZE06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1468

 Score =  117 bits (59), Expect = 5e-23
 Identities = 275/347 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 342
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1280 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1221

                                                                        
Query: 343  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 402
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1220 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1161

                                                                        
Query: 403  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 462
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1160 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1101

                                                                        
Query: 463  atttcaccatgcttagcgataccagccgcatggattttcaggacctccgtcctggattgc 522
            ||||||||||| || ||||||||||| |||||||| || || |  ||| | || || |||
Sbjct: 1100 atttcaccatgtttggcgataccagctgcatggatcttaagaatatccattcttgactgc 1041

                                                                        
Query: 523  tcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgcagga 582
            || || || |  || ||||| ||||||||  |||  | ||| ||||| || |||||||||
Sbjct: 1040 tcgtttggcaaagggatctcaatctttctacctaaccttcccggacggagaagcgcagga 981

                                                           
Query: 583  tccaagacatcaggacggttcgtcgccatgatcatcttcacctttcc 629
            || |  |||||||| | ||| || ||||| ||||| |||||||||||
Sbjct: 980  tcaagcacatcaggcctgtttgtggccattatcattttcacctttcc 934

---

>gb|AY241962.1| Dermacentor variabilis 26S proteasome regulatory subunit mRNA,
            complete cds
          Length = 1322

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 125/152 (82%)
 Strand = Plus / Minus

                                                                        
Query: 325  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 384
            ||||||||||||||||||||||| |  |||||| | || || || || |||||||||  |
Sbjct: 1166 cgcaccgccttcatgaagtcttcctcaatgacgaactcccggtcggcacgaatggcaaac 1107

                                                                        
Query: 385  atgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagctta 444
            || ||||| |||||||| || ||||| ||||| ||||| |||||||| || | |||||| 
Sbjct: 1106 ataccagcttcagtgcacacgttgcgcagatctgcaccgttgaagccatctgaaagcttc 1047

                                            
Query: 445  accacagcctcgtaatcaatttcaccatgctt 476
            |||||||||||  | |||| ||| ||||||||
Sbjct: 1046 accacagcctcccagtcaacttcgccatgctt 1015

---

>ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
            nucleoside-triphosphatase/ nucleotide binding AT1G45000
            mRNA, complete cds
          Length = 1555

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1203 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1144

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1143 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1084

                                      
Query: 451  gcctcgtaatcaatttcaccatgctt 476
            ||||| || || ||||| ||||||||
Sbjct: 1083 gcctcatagtctatttctccatgctt 1058

---

>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                         
Query: 431   cctcggcaagcttaaccacagcctcgtaatcaatttcaccatgcttagcgataccagccg 490
             |||||||||| ||||| || || || || ||||||||||||||||| || || ||||| |
Sbjct: 87451 cctcggcaagtttaacaaccgcttcatagtcaatttcaccatgctttgcaattccagcag 87510

                                                       
Query: 491   catggattttcaggacctccgtcctggattgctcattcggta 532
             |||||||||| ||||  ||| |||| || |||||||| ||||
Sbjct: 87511 catggattttgaggatttccatccttgactgctcatttggta 87552



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 361   tcacgctctgctcgaatggcagccatgccagcctcagtgcagacattgcgaagatcggca 420
             ||||| ||||| |||||||||| ||| ||||| |||||||| |  || |||||||| |||
Sbjct: 87267 tcacgttctgcacgaatggcagacattccagcttcagtgcaaatgttacgaagatcagca 87326

                          
Query: 421   ccattgaagccct 433
             |||||||| ||||
Sbjct: 87327 ccattgaacccct 87339



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 622   acctttccaagctcatcgaatccatcca 649
             ||||||||||||| ||| ||||||||||
Sbjct: 87818 acctttccaagctgatcaaatccatcca 87845

---

>gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a-like
            protein (At1g45000) mRNA, complete cds
          Length = 1254

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1127 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1068

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1067 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1008

                                      
Query: 451  gcctcgtaatcaatttcaccatgctt 476
            ||||| || || ||||| ||||||||
Sbjct: 1007 gcctcatagtctatttctccatgctt 982

---

>gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AAA-ATPase subunit
            RPT4a (At1g45000; F27F5.8) mRNA, complete cds
          Length = 1465

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1203 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1144

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1143 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1084

                                      
Query: 451  gcctcgtaatcaatttcaccatgctt 476
            ||||| || || ||||| ||||||||
Sbjct: 1083 gcctcatagtctatttctccatgctt 1058

---

>ref|NM_132080.2| Drosophila melanogaster Rpt4 CG3455-RA (Rpt4), mRNA
          Length = 1465

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                        
Query: 325  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 384
            |||||||||||||||||||| || ||||||||||| || ||||| || |||||||||   
Sbjct: 1259 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctccgcacgaatggcaaag 1200

                                                     
Query: 385  atgccagcctcagtgcagacattgcgaagatcggcaccatt 425
            |  || ||||| ||||||||||| || ||||| || |||||
Sbjct: 1199 agacccgcctccgtgcagacattacgcagatcagcgccatt 1159

---

>gb|AF145310.1|AF145310 Drosophila melanogaster 26S proteasome regulatory complex subunit
            p42D mRNA, complete cds
          Length = 1173

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 325  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 381
            |||||||||||||||||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 1118 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctccgcacgaatggca 1062

---

>gb|AF024493.1| Caenorhabditis elegans cosmid F23F1, complete sequence
          Length = 20486

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                         
Query: 544   atctttctgtctaggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttc 603
             |||||||| || || | |||||||||||| || |||||||||||   ||||||||| |||
Sbjct: 15547 atctttctatcaagtcttccaggacgaagaagagcaggatccaatgtatcaggacgattc 15606

                                                         
Query: 604   gtcgccatgatcatcttcacctttccaagctcatcgaatccatc 647
             || ||||| || | ||| || |||||||||  ||||||||||||
Sbjct: 15607 gtggccataataaccttgacttttccaagcgaatcgaatccatc 15650

---

>ref|NM_001026943.2| Caenorhabditis elegans proteasome Regulatory Particle, ATPase-like
            family member (rpt-4) (rpt-4) mRNA, complete cds
          Length = 1305

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 544  atctttctgtctaggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttc 603
            |||||||| || || | |||||||||||| || |||||||||||   ||||||||| |||
Sbjct: 1031 atctttctatcaagtcttccaggacgaagaagagcaggatccaatgtatcaggacgattc 972

                                                        
Query: 604  gtcgccatgatcatcttcacctttccaagctcatcgaatccatc 647
            || ||||| || | ||| || |||||||||  ||||||||||||
Sbjct: 971  gtggccataataaccttgacttttccaagcgaatcgaatccatc 928

---

>ref|NM_001026942.2| Caenorhabditis elegans proteasome Regulatory Particle, ATPase-like
            family member (rpt-4) (rpt-4) mRNA, complete cds
          Length = 1461

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 544  atctttctgtctaggcgtccaggacgaaggagcgcaggatccaagacatcaggacggttc 603
            |||||||| || || | |||||||||||| || |||||||||||   ||||||||| |||
Sbjct: 1031 atctttctatcaagtcttccaggacgaagaagagcaggatccaatgtatcaggacgattc 972

                                                        
Query: 604  gtcgccatgatcatcttcacctttccaagctcatcgaatccatc 647
            || ||||| || | ||| || |||||||||  ||||||||||||
Sbjct: 971  gtggccataataaccttgacttttccaagcgaatcgaatccatc 928

---

>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 140/176 (79%)
 Strand = Plus / Plus

                                                                         
Query: 450   agcctcgtaatcaatttcaccatgcttagcgataccagccgcatggattttcaggacctc 509
             |||||||||||| ||||||||||| || ||||||||||| |||||||| || || |  ||
Sbjct: 77848 agcctcgtaatcgatttcaccatgtttggcgataccagctgcatggatcttaagaatatc 77907

                                                                         
Query: 510   cgtcctggattgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacg 569
             | | || || ||||| || || |  || ||||| |||||||| ||||  | ||| |||||
Sbjct: 77908 cattcttgactgctcgtttggcaaagggatctcaatctttctatctaaccttcccggacg 77967

                                                                     
Query: 570   aaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatcttcacct 625
              || ||||||||||| |  |||||||| | ||| || ||||| ||||| |||||||
Sbjct: 77968 gagaagcgcaggatcaagcacatcaggcctgtttgtggccattatcattttcacct 78023



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                         
Query: 332   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
             |||||||||| ||||| ||||| || || || ||||||||||| || |||  ||| ||||
Sbjct: 77643 ccttcatgaaatcttcatggatcacataatcccgctctgctcggattgcaaacattccag 77702

                                                       
Query: 392   cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
             | || ||||| |  || || ||||| ||||||||||| ||||
Sbjct: 77703 cttccgtgcatatgttacgcagatcagcaccattgaatccct 77744

---

>ref|XM_812559.1| Trypanosoma cruzi strain CL Brener 26S protease regulatory subunit
            (Tc00.1047053510311.70) partial mRNA
          Length = 1197

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 388  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaac 446
            |||||||||||||| ||||| || | ||||||||||||||| ||||| | |||||||||
Sbjct: 1076 ccagcctcagtgcacacattccgtaaatcggcaccattgaatccctccgaaagcttaac 1018

---

>gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds
          Length = 483

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 331 gccttcatgaagtcttcgtggatgacgtagtcacgctc 368
           ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 475 gccttcatgaagtcttcytggatgacgtattcacgctc 438



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 391 gcctcagtgcagacattgcgaagatcggcaccattgaa 428
           ||||| ||||| | ||||||||||||||| ||||||||
Sbjct: 415 gcctcggtgcaaatattgcgaagatcggcgccattgaa 378

---

>emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS62ZE04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1297

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1123 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1064

                                                                        
Query: 391  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 450
            || |||||||| |  || || ||||||||||||||||  |||||  |||| || || | |
Sbjct: 1063 gcttcagtgcatatgttacgcagatcggcaccattgagaccctctccaagtttcacgata 1004

                                      
Query: 451  gcctcgtaatcaatttcaccatgctt 476
            ||||| || || ||||| ||||||||
Sbjct: 1003 gcctcatagtctatttctccatgctt 978

---

>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
             complete sequence
          Length = 137336

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                         
Query: 332   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 391
             |||||||||||||||| || || || ||||||||||||||||  || ||   ||| ||||
Sbjct: 37409 ccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattccag 37350

                                                       
Query: 392   cctcagtgcagacattgcgaagatcggcaccattgaagccct 433
             | |||||||| |  || || ||||||||||||||||| ||||
Sbjct: 37349 cttcagtgcatatgttacgcagatcggcaccattgaaaccct 37308

---

>ref|XM_633449.1| Dictyostelium discoideum hypothetical protein (DDB0186051), partial
           mRNA
          Length = 1182

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 535 ggaatctctatctttctgtctaggcgtccaggacgaaggagcgcaggatccaagacatca 594
           ||||| ||||| ||||| ||||  || || ||||||||||| |||||||| || ||||||
Sbjct: 917 ggaatttctatttttctatctaaacgacctggacgaaggagggcaggatctaaaacatca 858

                                            
Query: 595 ggacggttcgtcgccatgatcatcttcaccttt 627
           ||||| || || |||||||| || || ||||||
Sbjct: 857 ggacgatttgtagccatgatgattttaaccttt 825

---

>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 520   tgctcattcggtagcggaatctctatctttctgtctaggcgtccaggacgaaggagcgca 579
             |||||||| || || |||||||||||||||||||| || | ||| ||||| || ||||||
Sbjct: 25073 tgctcattaggaagaggaatctctatctttctgtccagtcttcctggacgtagaagcgca 25132

                  
Query: 580   ggatc 584
             |||||
Sbjct: 25133 ggatc 25137

---

>gb|AY071182.1| Drosophila melanogaster RE23388 full length cDNA
          Length = 1479

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 325  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 384
            ||||||||||||||||||||  | ||||||||||| || ||||| || |||||||||   
Sbjct: 1259 cgcaccgccttcatgaagtccccctggatgacgtactcccgctccgcacgaatggcaaag 1200

                                                     
Query: 385  atgccagcctcagtgcagacattgcgaagatcggcaccatt 425
            |  || ||||| ||||||||||| || ||||| || |||||
Sbjct: 1199 agacccgcctccgtgcagacattacgcagatcagcgccatt 1159

---

>ref|XM_808730.1| Trypanosoma cruzi strain CL Brener 26S protease regulatory subunit
            (Tc00.1047053510265.20) partial mRNA
          Length = 1197

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 388  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagctt 443
            |||||||||||||| ||||| || | ||||||||||||||| ||||| | ||||||
Sbjct: 1076 ccagcctcagtgcacacattccgtaaatcggcaccattgaatccctccgaaagctt 1021

---

>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160001

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 325   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 368
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 20756 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 20713

---

>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 189976

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 325   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 368
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 65477 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 65520

---

>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete
             sequence
          Length = 305376

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 325   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 368
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 55336 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 55379

---

>ref|NM_140268.1| Drosophila melanogaster CG7257-RA (CG7257), mRNA
          Length = 1395

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                       
Query: 559 cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatc 618
           ||||||||||| || ||||| |||||||    ||| ||||| || || ||||||||||| 
Sbjct: 989 cgtccaggacgcagcagcgccggatccagtgtatccggacgattggtggccatgatcatt 930

                                          
Query: 619 ttcacctttccaagctcatcgaatccatcca 649
           |||||||  |||||  |||||||||||||||
Sbjct: 929 ttcacctggccaagagcatcgaatccatcca 899

---

>gb|AC010698.7| Drosophila melanogaster 3L BAC RP98-15K18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174631

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                         
Query: 559   cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatc 618
             ||||||||||| || ||||| |||||||    ||| ||||| || || ||||||||||| 
Sbjct: 61375 cgtccaggacgcagcagcgccggatccagtgtatccggacgattggtggccatgatcatt 61434

                                            
Query: 619   ttcacctttccaagctcatcgaatccatcca 649
             |||||||  |||||  |||||||||||||||
Sbjct: 61435 ttcacctggccaagagcatcgaatccatcca 61465

---

>gb|AY089267.1| Drosophila melanogaster AT06668 full insert cDNA
          Length = 1409

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                       
Query: 559 cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatc 618
           ||||||||||| || ||||| |||||||    ||| ||||| || || ||||||||||| 
Sbjct: 989 cgtccaggacgcagcagcgccggatccagtgtatctggacgattggtggccatgatcatt 930

                                          
Query: 619 ttcacctttccaagctcatcgaatccatcca 649
           |||||||  |||||  |||||||||||||||
Sbjct: 929 ttcacctggccaagagcatcgaatccatcca 899

---

>gb|AE003543.4| Drosophila melanogaster chromosome 3L, section 42 of 83 of the complete
              sequence
          Length = 276132

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                          
Query: 559    cgtccaggacgaaggagcgcaggatccaagacatcaggacggttcgtcgccatgatcatc 618
              ||||||||||| || ||||| |||||||    ||| ||||| || || ||||||||||| 
Sbjct: 211041 cgtccaggacgcagcagcgccggatccagtgtatccggacgattggtggccatgatcatt 210982

                                             
Query: 619    ttcacctttccaagctcatcgaatccatcca 649
              |||||||  |||||  |||||||||||||||
Sbjct: 210981 ttcacctggccaagagcatcgaatccatcca 210951

---

>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 598    cggttcgtcgccatgatcatcttcacctt 626
              ||||||||||||||||||| |||||||||
Sbjct: 202826 cggttcgtcgccatgatcaccttcacctt 202798



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 384    catgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctc 434
              |||||| ||||| ||||| || ||||| ||||| ||||| |||||||||||
Sbjct: 203040 catgccggcctccgtgcacacgttgcgcagatcagcaccgttgaagccctc 202990

---

>gb|AY348236.1| Drosophila bipolita RPT4 (Rpt4) gene, partial cds
          Length = 458

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 333 cttcatgaagtcttcgtggatgacgtagtcacgctc 368
           ||||||||||||||| |||||||| || ||||||||
Sbjct: 456 cttcatgaagtcttcytggatgacatattcacgctc 421

---

>gb|AY348235.1| Drosophila canipolita RPT4 (Rpt4) gene, partial cds
          Length = 466

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 333 cttcatgaagtcttcgtggatgacgtagtcacgctc 368
           ||||||||||||||| |||||||| || ||||||||
Sbjct: 463 cttcatgaagtcttcttggatgacatattcacgctc 428

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 582     atccaagacatcaggacggttcgtcgcc 609
               ||||||||||||||||||||| ||||||
Sbjct: 1325081 atccaagacatcaggacggttggtcgcc 1325108

---

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 582    atccaagacatcaggacggttcgtcgcc 609
              ||||||||||||||||||||| ||||||
Sbjct: 295801 atccaagacatcaggacggttggtcgcc 295774

---

>ref|XM_813585.1| Trypanosoma cruzi strain CL Brener transitional endoplasmic reticulum
            ATPase (Tc00.1047053509733.170) partial mRNA
          Length = 2337

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 580  ggatccaagacatcaggacggtt 602
            |||||||||||||||||||||||
Sbjct: 1850 ggatccaagacatcaggacggtt 1828

---

>ref|XM_962695.1| PREDICTED: Tribolium castaneum similar to CG3455-PA (LOC656146), mRNA
          Length = 1300

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 331  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 390
            |||||||| |||||||| ||||| ||||| || || || | ||||||||||  ||  |||
Sbjct: 1199 gccttcataaagtcttcttggattacgtattcccgttcagatcgaatggcaaacaaacca 1140

                       
Query: 391  gcctcagtgca 401
            |||||||||||
Sbjct: 1139 gcctcagtgca 1129

---

>gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete sequence
          Length = 103543

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 623   cctttccaagctcatcgaatccatcc 648
             |||||||||| |||||||||||||||
Sbjct: 65422 cctttccaagttcatcgaatccatcc 65397

---

>emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in linkage group 13,
             complete sequence
          Length = 163673

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    aaacaaacaatgtaaatctaac 64
             ||||||||||||||||||||||
Sbjct: 82936 aaacaaacaatgtaaatctaac 82957

---

>emb|CR731783.2|CNS0GRL8 Tetraodon nigroviridis full-length cDNA
          Length = 1227

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1070 ttccgcacagccttcatgaagtcctcctgggtgacgta 1033

---

>emb|CR731667.2|CNS0GRI0 Tetraodon nigroviridis full-length cDNA
          Length = 1236

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1079 ttccgcacagccttcatgaagtcctcctgggtgacgta 1042

---

>emb|CR728890.2|CNS0GPCW Tetraodon nigroviridis full-length cDNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1140 ttccgcacagccttcatgaagtcctcctgggtgacgta 1103

---

>emb|CR727745.2|CNS0GOH3 Tetraodon nigroviridis full-length cDNA
          Length = 1086

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 936 ttccgcacagccttcatgaagtcctcctgggtgacgta 899

---

>emb|CR727398.2|CNS0GO7G Tetraodon nigroviridis full-length cDNA
          Length = 1226

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1086 ttccgcacagccttcatgaagtcctcctgggtgacgta 1049

---

>emb|CR685292.1|CNS0FRQ0 Tetraodon nigroviridis full-length cDNA
          Length = 1274

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1127 ttccgcacagccttcatgaagtcctcctgggtgacgta 1090

---

>emb|CR679775.2|CNS0FNGR Tetraodon nigroviridis full-length cDNA
          Length = 1291

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1141 ttccgcacagccttcatgaagtcctcctgggtgacgta 1104

---

>emb|CR679558.2|CNS0FNAQ Tetraodon nigroviridis full-length cDNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1146 ttccgcacagccttcatgaagtcctcctgggtgacgta 1109

---

>emb|CR676800.2|CNS0FL6K Tetraodon nigroviridis full-length cDNA
          Length = 1295

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1146 ttccgcacagccttcatgaagtcctcctgggtgacgta 1109

---

>emb|CR675817.2|CNS0FKFJ Tetraodon nigroviridis full-length cDNA
          Length = 1285

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1136 ttccgcacagccttcatgaagtcctcctgggtgacgta 1099

---

>emb|CR675913.1|CNS0FKI7 Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1157 ttccgcacagccttcatgaagtcctcctgggtgacgta 1120

---

>emb|CR675385.2|CNS0FK3J Tetraodon nigroviridis full-length cDNA
          Length = 1296

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1145 ttccgcacagccttcatgaagtcctcctgggtgacgta 1108

---

>emb|CR674301.2|CNS0FJ9F Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 818 ttccgcacagccttcatgaagtcctcctgggtgacgta 781

---

>emb|CR672027.2|CNS0FHI9 Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097

---

>emb|CR671714.2|CNS0FH9K Tetraodon nigroviridis full-length cDNA
          Length = 1255

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1119 ttccgcacagccttcatgaagtcctcctgggtgacgta 1082

---

>emb|CR670430.2|CNS0FG9W Tetraodon nigroviridis full-length cDNA
          Length = 1295

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1145 ttccgcacagccttcatgaagtcctcctgggtgacgta 1108

---

>emb|CR667294.2|CNS0FDUS Tetraodon nigroviridis full-length cDNA
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1135 ttccgcacagccttcatgaagtcctcctgggtgacgta 1098

---

>emb|CR666785.2|CNS0FDGN Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097

---

>emb|CR666640.2|CNS0FDCM Tetraodon nigroviridis full-length cDNA
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 956 ttccgcacagccttcatgaagtcctcctgggtgacgta 919

---

>emb|CR664610.2|CNS0FBS8 Tetraodon nigroviridis full-length cDNA
          Length = 1325

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1177 ttccgcacagccttcatgaagtcctcctgggtgacgta 1140

---

>emb|CR665620.2|CNS0FCKA Tetraodon nigroviridis full-length cDNA
          Length = 1102

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 955 ttccgcacagccttcatgaagtcctcctgggtgacgta 918

---

>emb|CR665248.2|CNS0FC9Y Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097

---

>emb|CR660805.2|CNS0F8UJ Tetraodon nigroviridis full-length cDNA
          Length = 1287

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 322  ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1136 ttccgcacagccttcatgaagtcctcctgggtgacgta 1099

---

>emb|CR659548.2|CNS0F7VM Tetraodon nigroviridis full-length cDNA
          Length = 559

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 404 ttccgcacagccttcatgaagtcctcctgggtgacgta 367

---

>emb|CR658573.2|CNS0F74J Tetraodon nigroviridis full-length cDNA
          Length = 680

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 523 ttccgcacagccttcatgaagtcctcctgggtgacgta 486

---

>emb|CR657800.2|CNS0F6J2 Tetraodon nigroviridis full-length cDNA
          Length = 936

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 779 ttccgcacagccttcatgaagtcctcctgggtgacgta 742

---

>emb|CR657024.2|CNS0F5XI Tetraodon nigroviridis full-length cDNA
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 322 ttccgcaccgccttcatgaagtcttcgtggatgacgta 359
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 956 ttccgcacagccttcatgaagtcctcctgggtgacgta 919

---

>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 562     ccaggacgaaggagcgcaggatccaagacatcaggacggtt 602
               |||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 1673020 ccaggacgcagtagtgcaggatccaaaacatctggacggtt 1672980

---

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 562     ccaggacgaaggagcgcaggatccaagacatcaggacggtt 602
               |||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 2755265 ccaggacgcagtagtgcaggatccaaaacatctggacggtt 2755305

---

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 562    ccaggacgaaggagcgcaggatccaagacatcaggacggtt 602
              ||||||||||| || ||||||||||  |||||||| |||||
Sbjct: 386273 ccaggacgaagcagggcaggatccagcacatcagggcggtt 386313

---

>ref|NM_207919.1| Eremothecium gossypii AAR025Cp (AAR025C), mRNA
          Length = 2181

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 562  ccaggacgaaggagcgcaggatccaagacatcaggacggtt 602
            ||||||||||| || ||||||||||  |||||||| |||||
Sbjct: 1235 ccaggacgaagcagggcaggatccagcacatcagggcggtt 1195

---

>ref|NM_129998.2| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS)
            transcript variant AT2G44350.1 mRNA, complete cds
          Length = 2112

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1336 tcttcacctttccaagctca 1317

---

>ref|NM_180084.1| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS)
            transcript variant AT2G44350.2 mRNA, complete cds
          Length = 2115

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1339 tcttcacctttccaagctca 1320

---

>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     acctccgtcctggattgctc 524
               ||||||||||||||||||||
Sbjct: 1447722 acctccgtcctggattgctc 1447703

---

>gb|AC008146.10| Trypanosoma brucei chromosome 6 clone RPCI93-30P15, complete sequence
          Length = 127405

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   acctccgtcctggattgctc 524
             ||||||||||||||||||||
Sbjct: 17394 acctccgtcctggattgctc 17413

---

>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence
          Length = 168853

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gtaacttcatctcaaaaaag 26
             ||||||||||||||||||||
Sbjct: 71071 gtaacttcatctcaaaaaag 71090

---

>gb|BC073644.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA
            clone IMAGE:5515801), partial cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 110/140 (78%)
 Strand = Plus / Minus

                                                                        
Query: 334  ttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcc 393
            |||||||||||||| ||||  ||  ||||| | |||||||| || |||  ||| || || 
Sbjct: 1116 ttcatgaagtcttcctggacaacaaagtcatggtctgctcggattgcaaacatccccgct 1057

                                                                        
Query: 394  tcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcc 453
            || ||||||||||| | ||| ||||| ||||| || || || | |||||| || |  || 
Sbjct: 1056 tctgtgcagacattcctaaggtcggctccattaaaaccatctgaaagctttactatggct 997

                                
Query: 454  tcgtaatcaatttcaccatg 473
            || |||||||||||||||||
Sbjct: 996  tcataatcaatttcaccatg 977

---

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     ggactcgagcttcttggcgt 313
               ||||||||||||||||||||
Sbjct: 1559415 ggactcgagcttcttggcgt 1559434

---

>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence
          Length = 218929

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gtaacttcatctcaaaaaag 26
             ||||||||||||||||||||
Sbjct: 22127 gtaacttcatctcaaaaaag 22146

---

>gb|BC045087.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA
            clone IMAGE:5542937), partial cds
          Length = 1585

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 110/140 (78%)
 Strand = Plus / Minus

                                                                        
Query: 334  ttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcc 393
            |||||||||||||| ||||  ||  ||||| | |||||||| || |||  ||| || || 
Sbjct: 1149 ttcatgaagtcttcctggacaacaaagtcatggtctgctcggattgcaaacatccccgct 1090

                                                                        
Query: 394  tcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcc 453
            || ||||||||||| | ||| ||||| ||||| || || || | |||||| || |  || 
Sbjct: 1089 tctgtgcagacattcctaaggtcggctccattaaaaccatctgaaagctttactatggct 1030

                                
Query: 454  tcgtaatcaatttcaccatg 473
            || |||||||||||||||||
Sbjct: 1029 tcataatcaatttcaccatg 1010

---

>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a
             novel gene, the 5' end of the PLAC1 gene for
             placenta-specific 1, a ribosomal protein L21 (RPL21)
             pseudogene, a ribosomal protein S7 (RPS7) pseudogene and
             the 3' end of the LOC169090 gene, complete sequence
          Length = 209317

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   caaactccaccatggtacaa 215
             ||||||||||||||||||||
Sbjct: 37055 caaactccaccatggtacaa 37074

---

>ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predicted mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 370  gctcgaatggcagccatgccagcctcagtgca 401
            ||||||||||||  |||||| |||||||||||
Sbjct: 1205 gctcgaatggcaaacatgccggcctcagtgca 1174

---

>emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 143499

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tagtcatcccacaacatata 150
              ||||||||||||||||||||
Sbjct: 120557 tagtcatcccacaacatata 120576

---

>emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 in linkage group 14,
              complete sequence
          Length = 155919

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    gtagtcatcccacaacatat 149
              ||||||||||||||||||||
Sbjct: 105976 gtagtcatcccacaacatat 105995

---

>ref|NM_200862.1| Danio rerio zgc:77855 (zgc:77855), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 331 gccttcatgaagtcttcgtggatg 354
           ||||||||||||||||| ||||||
Sbjct: 736 gccttcatgaagtcttcctggatg 759

---

>dbj|AK163154.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730041F15 product:ash1 (absent,
            small, or homeotic)-like (Drosophila), full insert
            sequence
          Length = 3770

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    gtaacttcatctcaaaaaag 26
            ||||||||||||||||||||
Sbjct: 3717 gtaacttcatctcaaaaaag 3736

---

>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 589     acatcaggacggttcgtcgc 608
               ||||||||||||||||||||
Sbjct: 1250512 acatcaggacggttcgtcgc 1250531

---

>gb|BT006613.1| Arabidopsis thaliana At2g44350 mRNA, complete cds
          Length = 1422

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1204 tcttcacctttccaagctca 1185

---

>gb|AF387018.1|AF387018 Arabidopsis thaliana citrate synthase (At2g44350; F4I1.16) mRNA,
            complete cds
          Length = 1757

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1338 tcttcacctttccaagctca 1319

---

>emb|BX819934.1|CNS0A8H8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS50ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1675

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1294 tcttcacctttccaagctca 1275

---

>emb|BX819782.1|CNS0A8I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS26ZH09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1714

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1293 tcttcacctttccaagctca 1274

---

>emb|BX819832.1|CNS0A7W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS34ZA05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1675

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1292 tcttcacctttccaagctca 1273

---

>gb|AY208828.1| Rhipicephalus appendiculatus proteasome-like protein mRNA, complete
            cds
          Length = 1366

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 388  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaacc 447
            ||||| |||||||| || ||||||||||| || || ||||| || || | |||||| |||
Sbjct: 1148 ccagcttcagtgcacacgttgcgaagatctgcgccgttgaatccgtccgaaagcttcacc 1089

                    
Query: 448  acagcctc 455
            || |||||
Sbjct: 1088 acggcctc 1081

---

>gb|AY085647.1| Arabidopsis thaliana clone 16528 mRNA, complete sequence
          Length = 1764

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tcttcacctttccaagctca 636
            ||||||||||||||||||||
Sbjct: 1315 tcttcacctttccaagctca 1296

---

>emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chromosome 4, complete
             sequence
          Length = 217751

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tacaagaaaacagacagtgc 230
             ||||||||||||||||||||
Sbjct: 25103 tacaagaaaacagacagtgc 25084

---

>gb|BC062862.1| Danio rerio zgc:77855, mRNA (cDNA clone MGC:77855 IMAGE:7002341),
           complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 331 gccttcatgaagtcttcgtggatg 354
           ||||||||||||||||| ||||||
Sbjct: 736 gccttcatgaagtcttcctggatg 759

---

>emb|BX927255.9| Zebrafish DNA sequence from clone CH211-266I18 in linkage group 20,
              complete sequence
          Length = 155519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 331    gccttcatgaagtcttcgtggatg 354
              ||||||||||||||||| ||||||
Sbjct: 113126 gccttcatgaagtcttcctggatg 113103

---

>emb|BX537272.5| Zebrafish DNA sequence from clone DKEY-25E12 in linkage group 20,
              complete sequence
          Length = 210184

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 331    gccttcatgaagtcttcgtggatg 354
              ||||||||||||||||| ||||||
Sbjct: 138473 gccttcatgaagtcttcctggatg 138450

---

>gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374_B_16, complete sequence
          Length = 219345

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tagtcatcccacaacatata 150
             ||||||||||||||||||||
Sbjct: 30320 tagtcatcccacaacatata 30339

---

>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    tgcagacattgcgaagatcg 417
              ||||||||||||||||||||
Sbjct: 795894 tgcagacattgcgaagatcg 795875

---

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 370     gctcgaatggcagccatgccagcctcagtgca 401
               ||||||||||||  |||||| |||||||||||
Sbjct: 1428485 gctcgaatggcaaacatgccggcctcagtgca 1428516

---

>emb|AL049849.1|HSB1L1C6 Homo sapiens chromosome 21 BAC B1L1C6, complete sequence
          Length = 41185

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaacaaacaatgtaaatcta 62
             ||||||||||||||||||||
Sbjct: 20970 aaacaaacaatgtaaatcta 20989

---

>emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chromosome X, complete
              sequence
          Length = 155349

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     acttcatctcaaaaaaggca 29
              ||||||||||||||||||||
Sbjct: 114536 acttcatctcaaaaaaggca 114517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,026,397
Number of Sequences: 3902068
Number of extensions: 5026397
Number of successful extensions: 92195
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 91703
Number of HSP's gapped (non-prelim): 479
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---