| Clone Name | rbags11e19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X58279.1|TAHSP173 T.aestivum mRNA for heat shock protein 17.3 Length = 719 Score = 609 bits (307), Expect = e-171 Identities = 397/425 (93%), Gaps = 9/425 (2%) Strand = Plus / Minus Query: 141 cactcatcacagcaaacacgctaccgactcatactctgcttcgattcgacgcgcacacca 200 |||||||||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| | Sbjct: 587 cactcatcacaggaaactcgctacccactcacactctgattcgattcgacgcgcacacga 528 Query: 201 tgcatctcattttcaggcgacctggacctggatggtcttgggcttcttaggctcgggcgg 260 ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 527 tgcatctca------ggcgacctggacctggatggtcttgggcttcttgggctcgggcgg 474 Query: 261 cggcagcttctcgacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctc 320 ||||||||| |||||||| |||||||||||||| |||||||||| ||| |||||||||| Sbjct: 473 cggcagcttgtcgacggtcacggtgagcacgccgtcgcggcacg--gcg-agatcttctc 417 Query: 321 catgtcggcgttctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccat 380 ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 416 catgtcggcgttctccggcagcacgaacttgcgcatcagcttgcccatgcggcgctccat 357 Query: 381 ccgcacgtacctggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcac 440 ||||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 356 ccgcaggtacttggcgtcctccttctcctccctccgccgctcgccgctgatcaccagcac 297 Query: 441 ccgctcgtcctccacctgcaccttgatgtcgccggacccgagccccggcatgtccaccac 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 ccgctcgtcctccacctgcaccttgatgtcgccggacccgagccccggcatgtccaccac 237 Query: 501 gaacgcgtacgcgcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgc 560 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 236 gaacgcgtacgcgcccggcagctccttcacgtcggcgggggtggccgccatggcgcgcgc 177 Query: 561 gtcgc 565 ||||| Sbjct: 176 gtcgc 172 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 40 ccccattaccattaacgaaacatcaaac 67 ||||||| |||||||||||||||||||| Sbjct: 706 ccccatttccattaacgaaacatcaaac 679
>gb|AF350423.1|AF350423 Triticum aestivum small heat shock protein HSP17.8 mRNA, complete cds Length = 611 Score = 581 bits (293), Expect = e-163 Identities = 367/392 (93%), Gaps = 6/392 (1%) Strand = Plus / Minus Query: 174 ctctgcttcgattcgacgcgcacaccatgcatctcattttcaggcgacctggacctggat 233 ||||||||||||||||||||||||| || ||||||| |||||||||||||||||| Sbjct: 535 ctctgcttcgattcgacgcgcacacgatacatctca------ggcgacctggacctggat 482 Query: 234 ggtcttgggcttcttaggctcgggcggcggcagcttctcgacggtgacggtgagcacgcc 293 ||||||||||||||| | |||||||||||||||||||| | || ||||||||||||||| Sbjct: 481 ggtcttgggcttcttggtttcgggcggcggcagcttctccaaggagacggtgagcacgcc 422 Query: 294 atcgcggcacgcggcggagatcttctccatgtcggcgttctcggggagcacgaacttgcg 353 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgcggcacacggcggagatcttctccatgtcggcgttctcggggagcacgaacttgcg 362 Query: 354 catcatcttgcccatgcggcgctccatccgcacgtacctggcgtcctccttctcctccct 413 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 361 catcatcttgcccatgcggcgctccatccgcaggtacttggcgtcctccttctcctccct 302 Query: 414 ccggcgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgcc 473 ||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 301 ccgccgctcgccgctgatcaccaacacgcgctcgtcctccacctgcaccttgatgtcgcc 242 Query: 474 ggacccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtc 533 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 241 ggaccccagccccggcatgtccaccacgaacgcgtacgcgcccggcagctccttcacgtc 182 Query: 534 ggcaggggtggccgccatggcgcgcgcgtcgc 565 ||| |||||||||||||||||||||||||||| Sbjct: 181 ggccggggtggccgccatggcgcgcgcgtcgc 150 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 catccccattaccattaacgaaac 60 |||||||||| ||||||||||||| Sbjct: 603 catccccatttccattaacgaaac 580
>gb|DQ172835.1| Dactylis glomerata Hsp17.2 mRNA, complete cds Length = 882 Score = 484 bits (244), Expect = e-133 Identities = 327/352 (92%), Gaps = 2/352 (0%) Strand = Plus / Minus Query: 215 aggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcga 274 |||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | Sbjct: 545 aggcaacctgaacctggatggtcttgggcttcttgggctcggggggcggcagcttctcca 486 Query: 275 cggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttct 334 | | || ||||||||||| |||||| || |||||||||||||||||||||||||||||| Sbjct: 485 cagacaccgtgagcacgccgtcgcgggacacggcggagatcttctccatgtcggcgttct 426 Query: 335 cggggagcacgaacttgcgcatcatcttgcccatgcggcgctcc-atccgcacgtacctg 393 | || ||||||||||||||||| | |||||| || ||||||||| ||||||| |||| || Sbjct: 425 caggcagcacgaacttgcgcatgagcttgcc-atccggcgctcccatccgcaggtacttg 367 Query: 394 gcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctcc 453 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 366 gcgtcctccttctcctccctgcggcgctcgccgctgatcaccagcacccgctcgtcctcc 307 Query: 454 acctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgcg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 acctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgcg 247 Query: 514 cctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 || |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 246 ccaggcagctccttcacgtcggccggggtggccgccatggcgcgcgcgtcgc 195
>gb|BT016317.1| Zea mays clone Contig150 mRNA sequence Length = 925 Score = 398 bits (201), Expect = e-108 Identities = 315/353 (89%) Strand = Plus / Minus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 604 tcaggcgaccttgacctcgatggtcttgggcttcttgggctcgggcgggggcagcttctc 545 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 |||||| |||||||||||||| || | |||| | || |||||||| |||||||||||||| Sbjct: 544 gacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgtt 485 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 484 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 425 Query: 393 ggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctc 452 ||||||||| |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 424 ggcgtcctcgcgctcctcccggcgccgctcgccgctgatcaccagcacccgctcgtcctc 365 Query: 453 cacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgc 512 |||||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 364 aacctgcaccttgatgtcgcccgtgcccagccccggcatgtccaccacgaacgcgtacgc 305 Query: 513 gcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 ||| || |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 304 gcccgggagctccttgacgtcggccggggtggccgccatggcgcgcgcgtcgc 252
>emb|X54076.1|ZMHSP18K2 Maize mRNA for an 18kDa heat shock protein Length = 843 Score = 396 bits (200), Expect = e-107 Identities = 314/352 (89%) Strand = Plus / Minus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 597 tcaggcgaccttgacctcgatggtcttgggcttcttgggctcgggcgggggcagcttctc 538 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 |||||| |||||||||||||| || | |||| | || |||||||| |||||||||||||| Sbjct: 537 gacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgtt 478 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 477 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 418 Query: 393 ggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctc 452 ||||||||| |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 417 ggcgtcctcgcgctcctcccggcgccgctcgccgctgatcaccagcacccgctcgtcctc 358 Query: 453 cacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgc 512 ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 357 cacctgcaccttgatgtcgcccgtgcccagccccggcatgtccaccacgaacgcgtacgc 298 Query: 513 gcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcg 564 ||| || |||||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 297 gcccgggagctccttgacgtcggccggggtgaccgccatggcgcgcgcgtcg 246
>gb|AY103645.1| Zea mays PCO150910 mRNA sequence Length = 858 Score = 391 bits (197), Expect = e-105 Identities = 314/353 (88%) Strand = Plus / Minus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| ||||| |||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 594 tcaggcgaccttgacctcgatggtcttgggtttcttgggctcgggcgggggcagcttctc 535 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 |||||| |||||||||||||| || | |||| | || |||||||| |||||||||||||| Sbjct: 534 gacggtcacggtgagcacgccgtccctgcacaccgccgagatcttgtccatgtcggcgtt 475 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 474 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 415 Query: 393 ggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctc 452 ||||||||| |||||||| || ||||||||||||| |||||||||||||||||||| Sbjct: 414 ggcgtcctcgcgctcctcccggcgccgctcgccgctgaccaccagcacccgctcgtcctc 355 Query: 453 cacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgc 512 |||||||||| ||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 354 cacctgcacccggatgtcgcccgtgcccagccccggcatgtccaccacgaacgcgtacgc 295 Query: 513 gcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 ||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 294 gccgggcagctccttcacgtcggccggggtggccgccatggcgcgcgcgtcgc 242
>emb|X54075.1|ZMHSP18K1 Maize mRNA for an 18kDa heat shock protein Length = 982 Score = 345 bits (174), Expect = 1e-91 Identities = 311/356 (87%), Gaps = 3/356 (0%) Strand = Plus / Minus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| ||||| |||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 734 tcaggcgaccttgacctcgatggtcttgggcttcttgggctccggcgggggcagcttctc 675 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 ||||| || ||||||||||| || | |||| |||||| || ||| || | ||||||||| Sbjct: 674 aacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtcgacgtcggcgtt 615 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 614 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 555 Query: 393 ggcgtcctcctt---ctcctccctccggcgctcgccgctgatgaccagcacccgctcgtc 449 |||||| |||| |||||||| || ||||||||||||| ||||||||||||||||| Sbjct: 554 ggcgtcgtcctcgcgctcctcccggcgccgctcgccgctgaccaccagcacccgctcgtc 495 Query: 450 ctccacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgta 509 ||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||| Sbjct: 494 ctccacctgcacccggatgtcgcccgtgcccagccccggcatgtccaccacgaacgcgta 435 Query: 510 cgcgcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 434 cgcgccgggcagctccttcacgtcggccggggtggccgccatggcgcgcgcgtcgc 379
>gb|S59777.1| HSP18=18 kda heat shock protein {microsporogenesis-specific} [Zea mays, Oh43, clone cMHSP18-1, mRNA, 790 nt] Length = 790 Score = 343 bits (173), Expect = 4e-91 Identities = 308/353 (87%) Strand = Plus / Minus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| | || |||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 523 tcaggcgaccttaatctcgatggtcttgggcttcttgggctccggcgggggcagcttctc 464 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 |||||| || ||||||||||| || | |||| |||||| || ||| |||| ||||||||| Sbjct: 463 gacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtccacgtcggcgtt 404 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 403 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 344 Query: 393 ggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctc 452 ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 343 ggcgtcctcgcgctcctcccggcggcgctcgccgctgatcaccagcacccgctcgtcctc 284 Query: 453 cacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgc 512 |||||||||| |||||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 283 cacctgcaccctgatgtcgcccgtgctcagccccggcatgtccaccacgaacgcgtacgc 224 Query: 513 gcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 || | |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 223 tcccgcgagctccttgacgtcggccggggtggccgccatggcgcgcgcgtcgc 171
>gb|BT016978.1| Zea mays clone EK07D2303G05.c mRNA sequence Length = 821 Score = 319 bits (161), Expect = 6e-84 Identities = 305/353 (86%) Strand = Plus / Plus Query: 213 tcaggcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||||||||| | || |||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 278 tcaggcgaccttaatctcgatggtcttgggcttcttgggctccggcgggggcagcttctc 337 Query: 273 gacggtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgtt 332 |||||| || ||||||||||| || | |||| |||||| || ||| |||| ||||||||| Sbjct: 338 gacggtcaccgtgagcacgccgtccctgcacacggcggcgaccttgtccacgtcggcgtt 397 Query: 333 ctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtacct 392 || || ||||||||||||||||| | ||||||||| || |||||||| |||| |||| | Sbjct: 398 gtccggcagcacgaacttgcgcatgaacttgcccatccgccgctccatgcgcaggtactt 457 Query: 393 ggcgtcctccttctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctc 452 ||||||||| |||||||| |||||||||||||||| ||||||||||| ||| |||| Sbjct: 458 ggcgtcctcgcgctcctcccgggggcgctcgccgctgatcaccagcacccggtcggcctc 517 Query: 453 cacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaacgcgtacgc 512 |||||||||| |||||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 518 cacctgcaccctgatgtcgcccgtgctcagccccggcatgtccaccacgaacgcgtacgc 577 Query: 513 gcctggcagctccttcacgtcggcaggggtggccgccatggcgcgcgcgtcgc 565 || | |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 578 tcccgcgagctccttgacgtcggccggggtggccgccatggcgcgcgcgtcgc 630
>ref|XM_550428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 809 Score = 202 bits (102), Expect = 9e-49 Identities = 156/174 (89%) Strand = Plus / Minus Query: 217 gcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcgacg 276 ||||||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 585 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 526 Query: 277 gtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttctcg 336 ||||||||||||||||| || ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 525 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 466 Query: 337 gggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtac 390 |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| Sbjct: 465 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgcaggtac 412 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 418 cgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgccggac 477 ||||| |||||||| ||||||| || ||| |||||||||||||||||||||||| |||| Sbjct: 369 cgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgatgtcggaggac 310 Query: 478 ccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtcggca 537 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 309 ttgagcccaggcatgtccaccacgaacgcgtacgccccgggcagatccttcacgtcggcg 250 Query: 538 ggggtggccgccatggcgcgcgcgtcgc 565 ||||| |||||||||||||| ||||||| Sbjct: 249 ggggtcgccgccatggcgcgggcgtcgc 222 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 33 agaacatccccattaccattaacgaaacatcaaaccatc 71 |||||||||||||| ||||| || ||||||||||||||| Sbjct: 797 agaacatccccatttccatt-accaaacatcaaaccatc 760
>gb|DQ180746.1| Oryza sativa (japonica cultivar-group) class II small heat shock protein mRNA, complete cds Length = 784 Score = 202 bits (102), Expect = 9e-49 Identities = 156/174 (89%) Strand = Plus / Minus Query: 217 gcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcgacg 276 ||||||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 560 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 501 Query: 277 gtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttctcg 336 ||||||||||||||||| || ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 500 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 441 Query: 337 gggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtac 390 |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| Sbjct: 440 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgcaggtac 387 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 418 cgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgccggac 477 ||||| |||||||| ||||||| || ||| |||||||||||||||||||||||| |||| Sbjct: 344 cgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgatgtcggaggac 285 Query: 478 ccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtcggca 537 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 284 ttgagcccaggcatgtccaccacgaacgcgtacgccccgggcagatccttcacgtcggcg 225 Query: 538 ggggtggccgccatggcgcgcgcgtcgc 565 ||||| |||||||||||||| ||||||| Sbjct: 224 ggggtcgccgccatggcgcgggcgtcgc 197 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 33 agaacatccccattaccattaacgaaacatcaaaccatc 71 |||||||||||||| ||||| || ||||||||||||||| Sbjct: 772 agaacatccccatttccatt-accaaacatcaaaccatc 735
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 9e-49 Identities = 156/174 (89%) Strand = Plus / Plus Query: 217 gcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcgacg 276 ||||||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 4448294 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 4448353 Query: 277 gtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttctcg 336 ||||||||||||||||| || ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 4448354 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 4448413 Query: 337 gggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtac 390 |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| Sbjct: 4448414 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgcaggtac 4448467 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Plus Query: 418 cgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgccggac 477 ||||| |||||||| ||||||| || ||| |||||||||||||||||||||||| |||| Sbjct: 4448510 cgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgatgtcggaggac 4448569 Query: 478 ccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtcggca 537 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 4448570 ttgagcccaggcatgtccaccacgaacgcgtacgccccgggcagatccttcacgtcggcg 4448629 Query: 538 ggggtggccgccatggcgcgcgcgtcgc 565 ||||| |||||||||||||| ||||||| Sbjct: 4448630 ggggtcgccgccatggcgcgggcgtcgc 4448657 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 417 gcgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcaccttg 465 |||||||||||||||||| ||||| |||| |||||||||||| ||||||| Sbjct: 1933489 gcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccaccttg 1933441 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 251 gctcgggcggcggcagcttctcgacggtgacggtga 286 ||||||||||||||||||||| |||| |||||||| Sbjct: 1314451 gctcgggcggcggcagcttcttgacgtggacggtga 1314416 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 33 agaacatccccattaccattaacgaaacatcaaaccatc 71 |||||||||||||| ||||| || ||||||||||||||| Sbjct: 4448082 agaacatccccatttccatt-accaaacatcaaaccatc 4448119 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 1951444 acggtgacggtgagcacgcc 1951425 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 1943528 acggtgacggtgagcacgcc 1943547
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 202 bits (102), Expect = 9e-49 Identities = 156/174 (89%) Strand = Plus / Plus Query: 217 gcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcgacg 276 ||||||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 108376 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 108435 Query: 277 gtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttctcg 336 ||||||||||||||||| || ||||| ||||||||||||| || | ||||||||| ||| Sbjct: 108436 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtcggcgttgtcg 108495 Query: 337 gggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtac 390 |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| Sbjct: 108496 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgcaggtac 108549 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Plus Query: 418 cgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgccggac 477 ||||| |||||||| ||||||| || ||| |||||||||||||||||||||||| |||| Sbjct: 108592 cgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgatgtcggaggac 108651 Query: 478 ccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtcggca 537 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 108652 ttgagcccaggcatgtccaccacgaacgcgtacgccccgggcagatccttcacgtcggcg 108711 Query: 538 ggggtggccgccatggcgcgcgcgtcgc 565 ||||| |||||||||||||| ||||||| Sbjct: 108712 ggggtcgccgccatggcgcgggcgtcgc 108739 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 33 agaacatccccattaccattaacgaaacatcaaaccatc 71 |||||||||||||| ||||| || ||||||||||||||| Sbjct: 108164 agaacatccccatttccatt-accaaacatcaaaccatc 108201
>dbj|AK071240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085O10, full insert sequence Length = 809 Score = 194 bits (98), Expect = 2e-46 Identities = 155/174 (89%) Strand = Plus / Minus Query: 217 gcgacctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctcgacg 276 ||||||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 585 gcgaccttgacctcgatggtcttgggcttcttgggctccggcggcgggagcttctcgacg 526 Query: 277 gtgacggtgagcacgccatcgcggcacgcggcggagatcttctccatgtcggcgttctcg 336 ||||||||||||||||| || ||||| ||||||||||||| || | ||| ||||| ||| Sbjct: 525 gtgacggtgagcacgccgtcctggcacacggcggagatcttgtcgacgtctgcgttgtcg 466 Query: 337 gggagcacgaacttgcgcatcatcttgcccatgcggcgctccatccgcacgtac 390 |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| Sbjct: 465 gggagcacgaacttgcgcatgaacttgcccatccgccgctccatccgcaggtac 412 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 418 cgctcgccgctgatgaccagcacccgctcgtcctccacctgcaccttgatgtcgccggac 477 ||||| |||||||| ||||||| || ||| |||||||||||||||||||||||| |||| Sbjct: 369 cgctccccgctgatcaccagcagcctctcctcctccacctgcaccttgatgtcggaggac 310 Query: 478 ccgagccccggcatgtccaccacgaacgcgtacgcgcctggcagctccttcacgtcggca 537 |||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 309 ttgagcccaggcatgtccaccacgaacgcgtacgccccgggcagatccttcacgtcggcg 250 Query: 538 ggggtggccgccatggcgcgcgcgtcgc 565 ||||| |||||||||||||| ||||||| Sbjct: 249 ggggtcgccgccatggcgcgggcgtcgc 222 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 33 agaacatccccattaccattaacgaaacatcaaaccatc 71 |||||||||||||| ||||| || ||||||||||||||| Sbjct: 797 agaacatccccatttccatt-accaaacatcaaaccatc 760
>gb|AF159562.1|AF159562 Prunus dulcis cytosolic class II low molecular weight heat shock protein (hsp17.5) mRNA, complete cds Length = 780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 445 tcgtcctccacctgcaccttgatgtcgccggacccgagccccggcatgtccaccacgaa 503 |||||||||||||| ||||||||||| |||||| ||| || ||||||||||| ||||| Sbjct: 326 tcgtcctccacctggaccttgatgtctccggacttgaggcctggcatgtccacgacgaa 268 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 atggtcttgggcttcttaggctcgggcggcggcagcttctc 272 |||||||||| |||||| ||||| ||||| ||||||||||| Sbjct: 542 atggtcttggacttctttggctcaggcggaggcagcttctc 502
>gb|M99429.1|PHNSHSPA Ipomoea nil small heat shock protein, complete cds Length = 1243 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 454 acctgcaccttgatgtcgccggacccgagccccggcatgtc 494 |||||||||||||||||||||||| |||||||||||||| Sbjct: 714 acctgcaccttgatgtcgccggacttcagccccggcatgtc 674
>gb|AY261671.1| Citrus x paradisi HSP19 class II mRNA, partial cds Length = 407 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 232 atggtcttgggcttcttaggctcgggcggcggcagcttctcgac 275 ||||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 281 atggtcttgggcttcttgggctccggcggtggcagcttatcgac 238
>ref|XM_472644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 404 tctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 462 ||||||||| ||| |||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 364 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 306
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 404 tctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 462 ||||||||| ||| |||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 22177122 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 22177064
>dbj|AK063700.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G08, full insert sequence Length = 931 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 404 tctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 462 ||||||||| ||| |||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 473 tctcctcccgccgccgctcgccgctgatcctcagcacccggttgtcctccacctccacc 415
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 404 tctcctccctccggcgctcgccgctgatgaccagcacccgctcgtcctccacctgcacc 462 ||||||||| ||| |||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 46983 tctcctcccgccgccgctcgccgctgatccgcagcacccggttgtcctccacctccacc 46925
>ref|NM_184281.2| Oryza sativa (japonica cultivar-group), mRNA Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 417 gcgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcaccttg 465 |||||||||||||||||| ||||| |||| |||||||||||| ||||||| Sbjct: 373 gcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccaccttg 325
>ref|XM_464666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 241 ggcttcttaggctcgggcggcggcagcttctcgacggtgacggtgagcac 290 |||||||| ||||| || |||||| ||| |||||||||||||||||||| Sbjct: 470 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcac 421
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 241 ggcttcttaggctcgggcggcggcagcttctcgacggtgacggtgagcac 290 |||||||| ||||| || |||||| ||| |||||||||||||||||||| Sbjct: 6586696 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcac 6586745
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 417 gcgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcaccttg 465 |||||||||||||||||| ||||| |||| |||||||||||| ||||||| Sbjct: 174871 gcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccaccttg 174823
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 241 ggcttcttaggctcgggcggcggcagcttctcgacggtgacggtgagcac 290 |||||||| ||||| || |||||| ||| |||||||||||||||||||| Sbjct: 21071 ggcttcttgggctccggtggcggcttcttgtcgacggtgacggtgagcac 21120
>dbj|AK063681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E07, full insert sequence Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/50 (92%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 417 gcgctcgccgctgatgaccagcac-ccgctcgtcctccacctgcaccttg 465 |||||||||||||||||| ||||| |||| |||||||||||| ||||||| Sbjct: 373 gcgctcgccgctgatgacgagcacgccgc-cgtcctccacctccaccttg 325
>emb|Z29554.1|HA179HSP H.annuus (Sunweed) mRNA for 17.9 kDa heat-shock protein Length = 824 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 220 acctggacctggatggtcttgggcttcttaggctcgggcggcggcagcttctc 272 ||||| ||||| || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 505 acctgcacctgaatcgtcttcggcttcttgggctcaggcggaggcagcttctc 453
>ref|XM_549969.1| Oryza sativa (japonica cultivar-group), mRNA Length = 210 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 251 gctcgggcggcggcagcttctcgacggtgacggtga 286 ||||||||||||||||||||| |||| |||||||| Sbjct: 184 gctcgggcggcggcagcttcttgacgtggacggtga 149
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 gaacttgcgcatcatcttgcccatgcgg 372 ||||||| |||||||||||||||||||| Sbjct: 2263558 gaacttgggcatcatcttgcccatgcgg 2263585
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 251 gctcgggcggcggcagcttctcgacggtgacggtga 286 ||||||||||||||||||||| |||| |||||||| Sbjct: 12502 gctcgggcggcggcagcttcttgacgtggacggtga 12467
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 251 gctcgggcggcggcagcttctcgacggtgacggtga 286 ||||||||||||||||||||| |||| |||||||| Sbjct: 108105 gctcgggcggcggcagcttcttgacgtggacggtga 108070
>ref|XM_511562.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 3000004C01 (LOC454742), mRNA Length = 3146 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 232 accagcacccgctcgtccaccacctg 207
>ref|NM_187471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 425 acggtgacggtgagcacgccat 404
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 8810359 acggtgacggtgagcacgccat 8810380 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 tcctccttctcctccctccggcgc 420 ||||||||||||||||||| |||| Sbjct: 18191620 tcctccttctcctccctcccgcgc 18191597 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 8807648 acggtgacggtgagcacgcc 8807629 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 8806241 acggtgacggtgagcacgcc 8806260
>gb|AF521138.1| Kandelia candel cytosolic class II low molecular weight heat shock protein mRNA, partial cds Length = 284 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 448 tcctccacctgcaccttgatgtcgccggac 477 |||||||||||||| |||||||| |||||| Sbjct: 268 tcctccacctgcactttgatgtcaccggac 239
>emb|X75616.1|OS17HSP O.sativa (Tainong 67) mRNA for heat shock protein 17.8 Length = 712 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 509 acggtgacggtgagcacgccat 488
>dbj|AK055862.1| Homo sapiens cDNA FLJ31300 fis, clone LIVER1000067, weakly similar to UROCANATE HYDRATASE (EC 4.2.1.49) Length = 3127 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agcacccgctcgtcctccacct 457 |||||||||||||||||||||| Sbjct: 2041 agcacccgctcgtcctccacct 2020
>ref|XM_941435.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 4 (LOC146909), mRNA Length = 3238 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_945204.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 6 (LOC146909), mRNA Length = 3011 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_945202.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 5 (LOC146909), mRNA Length = 1678 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_929923.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 2 (LOC146909), mRNA Length = 3238 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_085634.7| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 1 (LOC146909), mRNA Length = 3011 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|XM_934078.1| PREDICTED: Homo sapiens hypothetical protein LOC146909, transcript variant 3 (LOC146909), mRNA Length = 1678 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 211 accagcacccgctcgtccaccacctg 186
>ref|NM_144639.1| Homo sapiens urocanase domain containing 1 (UROC1), mRNA Length = 3127 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agcacccgctcgtcctccacct 457 |||||||||||||||||||||| Sbjct: 2041 agcacccgctcgtcctccacct 2020
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 1247 acggtgacggtgagcacgccat 1268
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 53512 acggtgacggtgagcacgccat 53533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 50801 acggtgacggtgagcacgcc 50782 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 49394 acggtgacggtgagcacgcc 49413
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 cgtcctccacctgcaccttgatgtcg 471 ||||||||||||||||||||| |||| Sbjct: 7952242 cgtcctccacctgcaccttgacgtcg 7952267
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 8808194 acggtgacggtgagcacgccat 8808215 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 tcctccttctcctccctccggcgc 420 ||||||||||||||||||| |||| Sbjct: 18185161 tcctccttctcctccctcccgcgc 18185138 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 8805483 acggtgacggtgagcacgcc 8805464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 8804076 acggtgacggtgagcacgcc 8804095
>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence Length = 203401 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accagcacccgctcgtcctccacctg 458 |||||||||||||||||| ||||||| Sbjct: 110550 accagcacccgctcgtccaccacctg 110575
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 cgtcctccacctgcaccttgatgtcg 471 ||||||||||||||||||||| |||| Sbjct: 59760 cgtcctccacctgcaccttgacgtcg 59785
>dbj|AB075869.1| Homo sapiens mRNA for putative protein product of HMFN0320, partial cds Length = 2743 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 agcacccgctcgtcctccacct 457 |||||||||||||||||||||| Sbjct: 2223 agcacccgctcgtcctccacct 2202
>dbj|AK120655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L10, full insert sequence Length = 4025 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 905 acggtgacggtgagcacgccat 926
>dbj|AK105317.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F06, full insert sequence Length = 725 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 446 cgtcctccacctgcaccttgatgtcg 471 ||||||||||||||||||||| |||| Sbjct: 256 cgtcctccacctgcaccttgacgtcg 231
>dbj|AK069547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021P13, full insert sequence Length = 712 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 446 acggtgacggtgagcacgccat 425
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 agcacccgctcgtcctccacct 457 |||||||||||||||||||||| Sbjct: 42996 agcacccgctcgtcctccacct 43017
>gb|U83671.1|OSU83671 Oryza sativa low molecular mass heat shock protein Oshsp17.7 (OSHSP17.7) gene, complete cds Length = 1535 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 1046 acggtgacggtgagcacgccat 1025
>gb|U83670.1|OSU83670 Oryza sativa low molecular mass heat shock protein Oshsp18.0 (OSHSP18.0) gene, complete cds Length = 1999 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgccat 295 |||||||||||||||||||||| Sbjct: 954 acggtgacggtgagcacgccat 933
>ref|NM_117608.1| Arabidopsis thaliana actin binding AT4G15200 mRNA, complete cds Length = 1803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 gctcgtcctccacctgcacct 463 ||||||||||||||||||||| Sbjct: 880 gctcgtcctccacctgcacct 900
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 cgccggacccgagccccggca 490 ||||||||||||||||||||| Sbjct: 2437773 cgccggacccgagccccggca 2437753 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cggcggagatcttctccatg 324 |||||||||||||||||||| Sbjct: 2077606 cggcggagatcttctccatg 2077625
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 gcggcagcttctcgacggtgacggt 284 ||||||||||||||||| ||||||| Sbjct: 1773410 gcggcagcttctcgacgttgacggt 1773386
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gccgccatggcgcgcgcgtcg 564 ||||||||||||||||||||| Sbjct: 1681527 gccgccatggcgcgcgcgtcg 1681507
>emb|X95716.1|PCSHSPGEN P.crispum mRNA for 17.9kDa heat shock protein class II Length = 727 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 235 gtcttgggcttcttaggctcgggcggcggcagcttct 271 ||||| |||||||||||||| || ||||||| ||||| Sbjct: 519 gtcttaggcttcttaggctcaggaggcggcaacttct 483
>emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP 17.9 Length = 807 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 327 ggcgttctcggggagcacgaacttgcgcatcatcttgcccatgcggcgctcca 379 |||||||||||||||| |||| ||||||| | |||||| ||| |||||||| Sbjct: 452 ggcgttctcggggagccggaacctgcgcatgaacttgccgctgctgcgctcca 400 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 505 acggtgacggtgagcacgcc 486
>emb|X65725.1|ZMHSP172 Z.mays mRNA for heat shock protein 17.2 Length = 756 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 408 ctccctccggcgctcgccgctgatgaccagcac 440 |||||| | ||||| |||||||||||||||||| Sbjct: 345 ctccctgctgcgctggccgctgatgaccagcac 313
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 agcttctcgacggtgacggtg 285 ||||||||||||||||||||| Sbjct: 1545 agcttctcgacggtgacggtg 1525
>dbj|D21818.1|LILLIM12 Lilium longiflorum LIM12 mRNA, partial cds, clone:plim12 Length = 662 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 345 gaacttgcgcatcatcttgcccatgcggcgctccatc 381 |||||| ||||||||||| ||||| ||||||| |||| Sbjct: 341 gaacttccgcatcatcttccccatccggcgctgcatc 305
>gb|AY098528.1| Ananas comosus class-1 LMW heat shock protein mRNA, complete cds Length = 911 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gacggtgacggtgagcacgcc 293 ||||||||||||||||||||| Sbjct: 505 gacggtgacggtgagcacgcc 485
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 gctcgtcctccacctgcacct 463 ||||||||||||||||||||| Sbjct: 29331 gctcgtcctccacctgcacct 29311
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 gctcgtcctccacctgcacct 463 ||||||||||||||||||||| Sbjct: 175213 gctcgtcctccacctgcacct 175193
>dbj|D14464.1|FVBCR1 Flavobacterium sp. gene for creatinase, complete cds Length = 1723 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 ccgccatggcgcgcgcgtcgc 565 ||||||||||||||||||||| Sbjct: 937 ccgccatggcgcgcgcgtcgc 957
>dbj|D00656.1|FVBCRE Flavobacterium sp. gene for creatinase, complete cds Length = 1956 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 ccgccatggcgcgcgcgtcgc 565 ||||||||||||||||||||| Sbjct: 1090 ccgccatggcgcgcgcgtcgc 1110
>gb|AY818396.1| Manihot esculenta chloroplast oxygen-evolving enhancer protein mRNA, complete cds; nuclear gene for chloroplast product Length = 684 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 gtcctccttctcctccctccggcg 419 |||||||| ||||||||||||||| Sbjct: 260 gtcctcctcctcctccctccggcg 283
>ref|XM_462738.2| Oryza sativa (japonica cultivar-group), mRNA Length = 754 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 517 acggtgacggtgagcacgcc 498
>ref|XM_462736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 395 acggtgacggtgagcacgcc 376
>ref|NM_187470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 431 acggtgacggtgagcacgcc 412
>ref|NM_187469.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 410 acggtgacggtgagcacgcc 391
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 128890 acggtgacggtgagcacgcc 128909
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 46463 acggtgacggtgagcacgcc 46444
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 tcctccttctcctccctccggcgc 420 ||||||||||||||||||| |||| Sbjct: 96605 tcctccttctcctccctcccgcgc 96582
>gb|BC052197.1| Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein, mRNA (cDNA clone MGC:59614 IMAGE:6511752), complete cds Length = 3199 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1355 gatggtcttgggcttcttag 1336
>ref|NM_134092.2| Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein (Mtbp), mRNA Length = 3199 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1355 gatggtcttgggcttcttag 1336
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 ctcgccgctgatgaccagca 439 |||||||||||||||||||| Sbjct: 5589583 ctcgccgctgatgaccagca 5589564
>gb|BC005500.1| Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein, mRNA (cDNA clone IMAGE:3489758), partial cds Length = 2160 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 352 gatggtcttgggcttcttag 333
>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6, complete sequence Length = 162560 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 100807 ccgctcgtcctccacctgca 100788
>emb|X60820.1|OSLMWHSP O.sativa mRNA for 16.9 kD low molecular weight heat shock protein Length = 806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 515 acggtgacggtgagcacgcc 496
>emb|X13431.1|TAHSPLW Wheat mRNA for putative low molecular weight heat shock protein Length = 741 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 476 acggtgacggtgagcacgcc 457
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cgccggacccgagccccggc 489 |||||||||||||||||||| Sbjct: 240885 cgccggacccgagccccggc 240866
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cgccggacccgagccccggc 489 |||||||||||||||||||| Sbjct: 39773 cgccggacccgagccccggc 39754
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cgccggacccgagccccggc 489 |||||||||||||||||||| Sbjct: 117870 cgccggacccgagccccggc 117851
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 accagcacccgctcgtcctc 452 |||||||||||||||||||| Sbjct: 39125 accagcacccgctcgtcctc 39144
>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene) Length = 7355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacgccatcgcggcacgcggcgga 311 |||||||||||||| ||||||||| Sbjct: 1406971 cacgccatcgcggcgcgcggcgga 1406994
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 435 cagcacccgctcgtcctccacctgcacc 462 ||||||||||||| ||| |||||||||| Sbjct: 2643226 cagcacccgctcgccctgcacctgcacc 2643253
>dbj|AK147430.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1040F03 product:myosin heavy chain IX, full insert sequence Length = 7372 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5744 ccgctcgtcctccacctgca 5725
>dbj|AK147407.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1034I06 product:myosin heavy chain IX, full insert sequence Length = 7365 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5737 ccgctcgtcctccacctgca 5718
>dbj|AK147296.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1009M09 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK133855.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730453D17 product:Mdm2, transformed 3T3 cell double minute p53 binding protein, full insert sequence Length = 2991 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1203 gatggtcttgggcttcttag 1184
>dbj|AK147235.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000I08 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147233.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000D20 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147223.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421019F08 product:myosin heavy chain IX, full insert sequence Length = 7359 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>dbj|AK147222.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421013D17 product:myosin heavy chain IX, full insert sequence Length = 7350 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5722 ccgctcgtcctccacctgca 5703
>dbj|AK147221.1| Mus musculus 16 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421012L14 product:myosin heavy chain IX, full insert sequence Length = 7309 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5681 ccgctcgtcctccacctgca 5662
>dbj|AK147216.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M421007L07 product:myosin heavy chain IX, full insert sequence Length = 7304 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5676 ccgctcgtcctccacctgca 5657
>dbj|AK147215.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421006M24 product:myosin heavy chain IX, full insert sequence Length = 7353 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5721 ccgctcgtcctccacctgca 5702
>dbj|AK147211.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003O18 product:myosin heavy chain IX, full insert sequence Length = 7410 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5778 ccgctcgtcctccacctgca 5759
>dbj|AK147210.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003H12 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147209.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M421002M21 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5734 ccgctcgtcctccacctgca 5715
>dbj|AK147208.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421002F11 product:myosin heavy chain IX, full insert sequence Length = 7371 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5743 ccgctcgtcctccacctgca 5724
>dbj|AK147206.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421002E03 product:myosin heavy chain IX, full insert sequence Length = 7363 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5735 ccgctcgtcctccacctgca 5716
>dbj|AK147203.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421001K04 product:myosin heavy chain IX, full insert sequence Length = 7354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5726 ccgctcgtcctccacctgca 5707
>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence Length = 164009 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cctccacctgcaccttgatg 468 |||||||||||||||||||| Sbjct: 35060 cctccacctgcaccttgatg 35079
>dbj|AK148323.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370090D06 product:myosin heavy chain IX, full insert sequence Length = 3745 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 2562 ccgctcgtcctccacctgca 2543
>gb|AY934530.1| Danio rerio nonmuscle myosin heavy chain B mRNA, partial cds Length = 642 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 256 ccgctcgtcctccacctgca 237
>ref|XM_677954.1| PREDICTED: Danio rerio similar to nonmuscle myosin heavy chain (LOC555454), mRNA Length = 3705 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 2097 ccgctcgtcctccacctgca 2078
>dbj|AK088652.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430022N15 product:weakly similar to MDM2 BINDING PROTEIN [Mus musculus], full insert sequence Length = 2571 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 783 gatggtcttgggcttcttag 764
>dbj|AK088549.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430020A15 product:similar to MDM2 BINDING PROTEIN [Mus musculus], full insert sequence Length = 3198 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1169 gatggtcttgggcttcttag 1150
>dbj|AK080036.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530051E15 product:MDM2 BINDING PROTEIN, full insert sequence Length = 2956 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1169 gatggtcttgggcttcttag 1150
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 7669804 acggtgacggtgagcacgcc 7669823
>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153517 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 397 tcctccttctcctccctccggcgctcgc 424 ||||||| |||||||| ||||||||||| Sbjct: 4554 tcctcctcctcctccccccggcgctcgc 4581
>ref|NM_022410.1| Mus musculus myosin, heavy polypeptide 9, non-muscle (Myh9), transcript variant 1, mRNA Length = 7355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 5727 ccgctcgtcctccacctgca 5708
>ref|XM_576269.1| PREDICTED: Rattus norvegicus similar to MDM2 Binding protein (LOC500870), mRNA Length = 2812 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1107 gatggtcttgggcttcttag 1088
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ggcttcttaggctcgggcggcggc 264 |||||||| ||||||||||||||| Sbjct: 1528227 ggcttcttcggctcgggcggcggc 1528250
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cttctccatgtcggcgttct 334 |||||||||||||||||||| Sbjct: 1015565 cttctccatgtcggcgttct 1015546
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 14022 acggtgacggtgagcacgcc 14003 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 6106 acggtgacggtgagcacgcc 6125
>dbj|AK131171.1| Mus musculus mRNA for mFLJ00279 protein Length = 5254 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 3692 ccgctcgtcctccacctgca 3673
>gb|L27063.1|STMDNAGYR Streptomyces coelicolor dnaA-gyrA region Length = 8200 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 accagcacccgctcgtcctc 452 |||||||||||||||||||| Sbjct: 2674 accagcacccgctcgtcctc 2655
>gb|M80186.1|RICLMWHSP Oryza sativa LMW heat shock protein mRNA, complete CDS Length = 801 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 491 acggtgacggtgagcacgcc 472
>dbj|AK121025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A14, full insert sequence Length = 753 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 516 acggtgacggtgagcacgcc 497
>dbj|AK119717.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F11, full insert sequence Length = 750 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 503 acggtgacggtgagcacgcc 484
>dbj|AK119243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B05, full insert sequence Length = 753 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 503 acggtgacggtgagcacgcc 484
>dbj|AK107883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D09, full insert sequence Length = 744 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 562 acggtgacggtgagcacgcc 543
>gb|AY109481.1| Zea mays CL2172_1 mRNA sequence Length = 740 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 gcgctcgccgctgatgaccagcac 440 ||||| |||||||||||||||||| Sbjct: 336 gcgctggccgctgatgaccagcac 313
>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence Length = 170303 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 101308 gatggtcttgggcttcttag 101327
>gb|BC054360.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:4984186), partial cds Length = 2529 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 821 ccgctcgtcctccacctgca 802
>gb|BC043703.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:5354239), partial cds Length = 2608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 1411 ccgctcgtcctccacctgca 1392
>gb|BC044834.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:4951337), partial cds Length = 2896 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 2372 ccgctcgtcctccacctgca 2353
>gb|BC006075.1| Mus musculus myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:3593519), partial cds Length = 1953 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 1272 ccgctcgtcctccacctgca 1253
>gb|U83669.1|OSU83669 Oryza sativa low molecular mass heat shock protein Oshsp17.3 (OSHSP17.3) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 870 acggtgacggtgagcacgcc 851
>dbj|D12635.1|RICYLMWHSP Oryza sativa (japonica cultivar-group) mRNA for low molecular weight heat shock protein, complete cds Length = 690 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 435 acggtgacggtgagcacgcc 416
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 276 ggtgacggtgagca-cgccatcgcggca 302 |||||||||||||| ||||||||||||| Sbjct: 877998 ggtgacggtgagcagcgccatcgcggca 877971
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 7739891 acggtgacggtgagcacgcc 7739910
>gb|AF007762.1| Agrostis stolonifera var. palustris heat shock protein 16.5 (ApHSP16.5) mRNA, complete cds Length = 724 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 483 acggtgacggtgagcacgcc 464
>gb|U81385.1|OSU81385 Oryza sativa heat shock protein (Oshsp16.9C) gene, complete cds Length = 1811 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 917 acggtgacggtgagcacgcc 898
>emb|AJ278508.1|MMU278508 Mus musculus mRNA for MDM2 Binding protein (Mtbp gene) Length = 3068 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatggtcttgggcttcttag 250 |||||||||||||||||||| Sbjct: 1276 gatggtcttgggcttcttag 1257
>emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on chromosome 15, complete sequence Length = 198994 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 178731 ccgctcgtcctccacctgca 178712
>gb|L14444.1|WHTHSP169C Triticum aestivum heat shock protein 16.9C (hsp16.9C) mRNA, 3' end Length = 1014 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 338 acggtgacggtgagcacgcc 319
>gb|M80939.1|RICHSEB Oryza sativa 16.9 kDa heat shock protein gene, complete cds Length = 3349 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 2149 acggtgacggtgagcacgcc 2130
>gb|M80938.1|RICHSEA Oryza sativa 16.9 kDa heat shock protein gene, complete cds Length = 2504 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acggtgacggtgagcacgcc 293 |||||||||||||||||||| Sbjct: 2190 acggtgacggtgagcacgcc 2171
>emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 in linkage group 6, complete sequence Length = 147484 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ccgctcgtcctccacctgca 460 |||||||||||||||||||| Sbjct: 61553 ccgctcgtcctccacctgca 61572
>dbj|D79980.1| Penicillium janthinellum DNA for polygalacturonase, complete cds Length = 3569 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgtcctccacctgcacctt 464 |||||||||||||||||||| Sbjct: 2104 tcgtcctccacctgcacctt 2123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,830,638 Number of Sequences: 3902068 Number of extensions: 3830638 Number of successful extensions: 104801 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 102919 Number of HSP's gapped (non-prelim): 1905 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)