ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags10p12 |
|---|---|
| Clone Library Name | barley_pub |
>UBP5_ARATH (O22207) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (AtUBP5) Length = 924 Score = 115 bits (287), Expect = 2e-25 Identities = 53/98 (54%), Positives = 73/98 (74%), Gaps = 1/98 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY++ ++KLETFV+FPI DLDL+ Y+A +N + Y LYA++NHYG MG GHYTA Sbjct: 819 RFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAH 878 Query: 488 I-CQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 I + W+ FDD ++ I+ED++K+ AAYVLFYRR+ Sbjct: 879 IKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRK 916
>UBP15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) Length = 981 Score = 110 bits (275), Expect = 4e-24 Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 1/98 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY+++ R+KL+T VDFPISDLD+S ++ N P + Y L A+SNHYG MGGGHYTA Sbjct: 837 RFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMGGGHYTAF 895 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 + G W+ FDD V+ SED I + AAYVLFY+R+ Sbjct: 896 AKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQ 933
>UBP15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) Length = 981 Score = 109 bits (272), Expect = 9e-24 Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 1/98 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY+++ R+KL+T VDFPI+DLD+S ++ N P + Y L A+SNHYG MGGGHYTA Sbjct: 837 RFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMGGGHYTAF 895 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 + G W+ FDD V+ SED I + AAYVLFY+R+ Sbjct: 896 AKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQ 933
>UBP11_HUMAN (P51784) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)| (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11) Length = 920 Score = 109 bits (272), Expect = 9e-24 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 4/101 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKH---YRLYAISNHYGNMGGGHY 498 RFSYT+F+R KL+T V+FPI DLD S ++ + N Y L A+SNHYG M GHY Sbjct: 787 RFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHY 846 Query: 497 TASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 T C + G WH FDD V+P++E+ I++ AAYVLFY+R+ Sbjct: 847 TTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQ 887
>UBP11_CANFA (Q01988) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)| (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11) (Fragment) Length = 445 Score = 99.0 bits (245), Expect = 1e-20 Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 4/101 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSY-IATENEQPNKHYR--LYAISNHYGNMGGGHY 498 RFSYT+F+R KL+T V+FPI DLD S + I +NE + Y+ L A+SNHYG + GHY Sbjct: 312 RFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHY 371 Query: 497 TASICQEGKGWHK-FDDECVTPISEDNIKTAAAYVLFYRRE 378 T C + G FDD V+P++E+ I++ AAYVLFY+R+ Sbjct: 372 TTFACNKDSGQSDYFDDNSVSPVTENQIESKAAYVLFYQRQ 412
>UBP11_MOUSE (Q99K46) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)| (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11) (Fragment) Length = 797 Score = 98.6 bits (244), Expect = 2e-20 Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 4/101 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKH---YRLYAISNHYGNMGGGHY 498 RFS+++ +R KL+T V FPI DLD S ++ + + Y L A+SNHYG M GHY Sbjct: 665 RFSFSKISREKLDTLVQFPIRDLDFSEFVIKPKNESSPDLYKYDLIAVSNHYGGMRDGHY 724 Query: 497 TASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 T C + G WH DD V+P++E+ I++ AAYVLFY+R+ Sbjct: 725 TTFACNKDSGQWHYLDDNSVSPVNENQIESKAAYVLFYQRQ 765
>UBP4_MOUSE (P35123) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein) Length = 962 Score = 93.2 bits (230), Expect = 6e-19 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY ++ R+KL+T V+FP+ L++S ++ + +P Y L A+SNHYG MG GHYTA Sbjct: 826 RFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYV-YDLIAVSNHYGAMGVGHYTAY 884 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 G W+ FDD V+ SED I T AAYVLFY+R Sbjct: 885 AKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQR 921
>UBP12_SCHPO (O60079) Probable ubiquitin carboxyl-terminal hydrolase 12 (EC| 3.1.2.15) (Ubiquitin thioesterase 12) (Ubiquitin-specific processing protease 12) (Deubiquitinating enzyme 12) Length = 979 Score = 93.2 bits (230), Expect = 6e-19 Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 5/102 (4%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLS----SYIATENEQPNKHYRLYAISNHYGNMGGGH 501 RFS + R+K++ V+FPI +LD+S SY +E E P Y LYA+ NHYG +GGGH Sbjct: 876 RFSSERRFRDKIDDLVEFPIDNLDMSMRTGSYKLSEKENPKLIYELYAVDNHYGGLGGGH 935 Query: 500 YTASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 YTA G ++ FDD VTP+ + T+AAY+LFYRR+ Sbjct: 936 YTAFAKNPDNGQFYCFDDSRVTPVCPEETVTSAAYLLFYRRK 977
>UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog) Length = 963 Score = 92.8 bits (229), Expect = 8e-19 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 1/97 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY ++ R+KL+T V+FPI L++S ++ + +P Y L A+SNHYG MG GHYTA Sbjct: 827 RFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYV-YDLIAVSNHYGAMGVGHYTAY 885 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + G W+ FDD V+ SED I T AAYVLFY+R Sbjct: 886 AKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQR 922
>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) Length = 1118 Score = 90.9 bits (224), Expect = 3e-18 Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 2/96 (2%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY + KL+T VDFP+ +LDLS Y+ K Y L+++SNHYG + GGHYTA Sbjct: 1013 RFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK-YNLFSVSNHYGGLDGGHYTA- 1070 Query: 488 ICQEG--KGWHKFDDECVTPISEDNIKTAAAYVLFY 387 C+ + W KFDD V+ IS ++K++AAY+LFY Sbjct: 1071 YCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15)| (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment) Length = 1371 Score = 90.5 bits (223), Expect = 4e-18 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%) Frame = -3 Query: 668 RFSYTQFT-RNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTA 492 RFS+ F R+K+ V+FP+ +LDLS + + E+ Y LYA+ NHYG M GGHYTA Sbjct: 1162 RFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTA 1221 Query: 491 --------SICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE*STAPVQK 354 S + GW FDD VT + E + T AYVLFYRR +PV++ Sbjct: 1222 CARLPNDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRR--NSPVER 1273
>UBP2_HUMAN (O75604) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease) Length = 605 Score = 90.1 bits (222), Expect = 5e-18 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFS ++ +KL TFV+FP+ DLDL + A+EN + Y LYA+SNH G GGHYTA Sbjct: 504 RFSESRIRTSKLTTFVNFPLRDLDLREF-ASENTN-HAVYNLYAVSNHSGTTMGGHYTAY 561 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFY 387 G G WH F+D VTP+S ++T+ AY+LFY Sbjct: 562 CRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (mUBPy) Length = 1080 Score = 89.7 bits (221), Expect = 7e-18 Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFSY + KL+T VDFP+ +LDLS Y+ K Y L+++SNHYG + GGHYTA Sbjct: 975 RFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK-YNLFSVSNHYGGLDGGHYTA- 1032 Query: 488 ICQEG--KGWHKFDDECVTPISEDNIKTAAAYVLFY 387 C+ + W KFDD V+ IS +++++AAY+LFY Sbjct: 1033 YCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>UBP2_MOUSE (O88623) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease) Length = 353 Score = 86.7 bits (213), Expect = 6e-17 Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 1/95 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFS ++ +KL TFV+FP+ DLDL + A+EN + Y LYA+SNH G GGHYTA Sbjct: 252 RFSESRIRTSKLTTFVNFPLRDLDLREF-ASENTN-HAVYNLYAVSNHSGTTMGGHYTAY 309 Query: 488 ICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFY 387 G WH F+D VTP+S ++T+ AY+LFY Sbjct: 310 CRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 344
>UBP12_YEAST (P39538) Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)| (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12) (Deubiquitinating enzyme 12) Length = 1254 Score = 84.0 bits (206), Expect = 4e-16 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RF + +K++ V+FPI+DLDLS Y+ +++ Y LYA+ NHYG +GGGHYTA Sbjct: 1013 RFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAY 1072 Query: 488 ICQ-EGKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + W+ FDD VT + +N +AY+LFY R Sbjct: 1073 VKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIR 1109
>UBP2_CHICK (O57429) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific protease) Length = 357 Score = 82.0 bits (201), Expect = 1e-15 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 4/98 (4%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKH--YRLYAISNHYGNMGGGHYT 495 RFS + +KL TFV+FP+ DLDL + + Q H Y LYA+SNH G GGHYT Sbjct: 256 RFSEARIRASKLTTFVNFPLKDLDLREFAS----QSCNHAVYNLYAVSNHSGTTMGGHYT 311 Query: 494 ASICQE--GKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 A C+ WH F+D VTP+S +++++ AY+LFY Sbjct: 312 A-YCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 348
>UBP3_MOUSE (Q91W36) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 520 Score = 77.0 bits (188), Expect = 5e-14 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIAT-ENEQPNKH-YRLYAISNHYGN-MGGGHY 498 RF +T + RNK++T+V FP+ LD+ Y+ EN P+ Y L A+ H+G+ +G GHY Sbjct: 413 RFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHY 472 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE*STAPVQK 354 TA EG+ W F+D VT E+ + A AY+LFY + A +K Sbjct: 473 TAYAVHEGR-WFHFNDSTVTVTDEETVGKAKAYILFYVERQARAGAEK 519
>UBP3_HUMAN (Q9Y6I4) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 521 Score = 75.5 bits (184), Expect = 1e-13 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIAT-ENEQPNKH-YRLYAISNHYGN-MGGGHY 498 RF +T + RNK++T+V+FP+ LD+ Y+ EN P Y L A+ H+G+ +G GHY Sbjct: 414 RFHWTAYLRNKVDTYVEFPLRGLDMKWYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHY 473 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 TA EG+ W F+D VT E+ + A AY+LFY Sbjct: 474 TAYATHEGR-WFHFNDSTVTLTDEETVVKAKAYILFY 509
>UBP21_HUMAN (Q9UK80) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)| (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21) (NEDD8-specific protease) Length = 565 Score = 73.9 bits (180), Expect = 4e-13 Identities = 37/95 (38%), Positives = 59/95 (62%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFS ++ + K VDFP+ L L + + + P Y+LYA+ NH G++ GHYTA Sbjct: 465 RFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPV--YQLYALCNHSGSVHYGHYTA- 521 Query: 488 ICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYR 384 +C+ GWH ++D V+P+SE+ + ++ YVLFY+ Sbjct: 522 LCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
>UBP21_MOUSE (Q9QZL6) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)| (Ubiquitin thioesterase 21) (Ubiquitin-specific processing protease 21) (Deubiquitinating enzyme 21) Length = 566 Score = 73.9 bits (180), Expect = 4e-13 Identities = 37/95 (38%), Positives = 59/95 (62%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RFS ++ + K VDFP+ L L + + + P Y+LYA+ NH G++ GHYTA Sbjct: 466 RFSTSRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPV--YQLYALCNHSGSVHYGHYTA- 522 Query: 488 ICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYR 384 +C+ GWH ++D V+P+SE+ + ++ YVLFY+ Sbjct: 523 LCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 557
>UBP33_HUMAN (Q8TEY7) Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.1.2.15)| (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (Deubiquitinating enzyme 33) (VHL-interacting deubiquitinating enzyme 1) Length = 942 Score = 72.4 bits (176), Expect = 1e-12 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RF + K+ T V FP+ LDL ++A ++ Y L ++ H+G GHY A Sbjct: 618 RFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIA- 676 Query: 488 ICQEGKG--WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 C+ W++FDD+ VT +SE ++ A AYVLFYR+ Sbjct: 677 YCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRK 714
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 67.8 bits (164), Expect = 3e-11 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 13/110 (11%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQ------------PNKH-YRLYAISN 528 RF + R K+ TF+ FP+ +LD++ ++A+ E PN++ Y L+A+ N Sbjct: 598 RFEHVGKQRRKINTFISFPL-ELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVIN 656 Query: 527 HYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 H+G + GHYT+ I Q+ W DD +T + +++ + Y+LFY ++ Sbjct: 657 HHGTLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQ 706
>UBP20_HUMAN (Q9Y2K6) Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15)| (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20) Length = 913 Score = 67.4 bits (163), Expect = 4e-11 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 2/98 (2%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RF + K+ + V FP+ LDL ++A E Y L ++ H+G G GHY A Sbjct: 587 RFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIA- 645 Query: 488 ICQE--GKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 CQ W++FDD+ VT + E ++ A YVLFYR+ Sbjct: 646 YCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRK 683
>UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)| (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22) Length = 525 Score = 66.6 bits (161), Expect = 6e-11 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 14/111 (12%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENE--------QP------NKHYRLYAIS 531 RF ++ R K+ T+V FP+ +LD++ ++A+ E QP + Y L+A+ Sbjct: 411 RFEHSAKLRRKITTYVSFPL-ELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVV 469 Query: 530 NHYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 NH G + GHYT+ I Q W K DD +T S ++ + Y+LFY ++ Sbjct: 470 NHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQ 520
>UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)| (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22) Length = 525 Score = 66.6 bits (161), Expect = 6e-11 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 14/111 (12%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENE--------QP------NKHYRLYAIS 531 RF ++ R K+ T+V FP+ +LD++ ++A+ E QP + Y L+A+ Sbjct: 411 RFEHSAKLRRKITTYVSFPL-ELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVV 469 Query: 530 NHYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 NH G + GHYT+ I Q W K DD +T S ++ + Y+LFY ++ Sbjct: 470 NHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQ 520
>UBP5_YEAST (P39944) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) Length = 805 Score = 63.5 bits (153), Expect = 5e-10 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 16/103 (15%) Frame = -3 Query: 641 NKLETFVDFPISDLDLSSY--------------IATENEQPNKHYRLYAISNHYGNMGGG 504 NK FV +P S LDL+ Y I T + P YRLY ++ H G++ GG Sbjct: 702 NKNNVFVQYPYS-LDLTPYWARDFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSGSLYGG 760 Query: 503 HYTASICQ-EGKGWHKFDDECVTPIS-EDNIKTAAAYVLFYRR 381 HYT+ + + KGW+ FDD PI+ T +AYVLFY R Sbjct: 761 HYTSYVYKGPKKGWYFFDDSLYRPITFSTEFITPSAYVLFYER 803
>UBP1_SCHPO (Q9USM5) Probable ubiquitin carboxyl-terminal hydrolase 1 (EC| 3.1.2.15) (Ubiquitin thioesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) Length = 849 Score = 63.5 bits (153), Expect = 5e-10 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 8/95 (8%) Frame = -3 Query: 644 RNKLETFVDFPISDLDLSSYIATE-------NEQPNKHYRLYAISNHYGNMGGGHYTA-S 489 R K V +P+ DL+L +++ + Q + Y LYA+ NH+G M GHYTA + Sbjct: 752 RRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGFMSNGHYTAYA 811 Query: 488 ICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYR 384 + + KFDD + I ++I T++AYVLFYR Sbjct: 812 RDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFYR 846
>UBPL_MIMIV (Q5UQR3) Probable ubiquitin carboxyl-terminal hydrolase (EC| 3.1.2.15) (Ubiquitin thioesterase) (Ubiquitin specific-processing protease) (Deubiquitinating enzyme) Length = 468 Score = 60.1 bits (144), Expect = 6e-09 Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATEN--EQPNKHYRLYAISNHYGNMGGGHY- 498 RF T+ ++ F+++P+ +LD+SS I ++ + Y+L + NH+G + GHY Sbjct: 365 RFGMTRIAKDN--RFINYPMDELDVSSVICSQQFEDSVQTKYKLQCVINHHGGLNNGHYF 422 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 T S + W++F+D +++++I AY+LFY R Sbjct: 423 TYSKIENTGEWYEFNDTYTGKVTDNHIVNQNAYILFYIR 461
>UBP8_YEAST (P50102) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) Length = 471 Score = 57.4 bits (137), Expect = 4e-08 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 8/95 (8%) Frame = -3 Query: 647 TRNKLETFVDFPISDLDLSSYIATENEQ--------PNKHYRLYAISNHYGNMGGGHYTA 492 + KL+ F++FP + L++ +Y +T+ + P+ Y L I +H G + GHY A Sbjct: 372 SNRKLDDFIEFP-TYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIA 430 Query: 491 SICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 G W KF+D V+ IS++ + AY+LFY Sbjct: 431 FCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFY 465
>UBP10_HUMAN (Q14694) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 798 Score = 56.2 bits (134), Expect = 9e-08 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%) Frame = -3 Query: 635 LETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMG-GGHYTASICQEG-KGWH 462 +E VD IS LS + +N + ++ YRL+A+ H+GN GGHYT + Q G GW Sbjct: 704 IEYPVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 763 Query: 461 KFDDECVTPISEDNI----KTAAAYVLFYRR 381 + DD+ V I++ + AY+L+YRR Sbjct: 764 RIDDQTVKVINQYQVVKPTAERTAYLLYYRR 794
>UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 792 Score = 55.8 bits (133), Expect = 1e-07 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 11/97 (11%) Frame = -3 Query: 638 KLETFVDFPISDLD-----LSSYIATENEQPNKHYRLYAISNHYGNMG-GGHYTASICQE 477 KL +D+P+ DL+ LS I +N + + YRL+A+ H+GN GGHYT + Q Sbjct: 693 KLVKNIDYPV-DLEISRELLSPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQI 751 Query: 476 G-KGWHKFDDECVTPISEDNI----KTAAAYVLFYRR 381 G GW + DD+ V I++ + AY+L+YRR Sbjct: 752 GLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRR 788
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRRE 378 Y LYAIS H G +GGGHY W+ ++D + D I T +AY+LFY ++ Sbjct: 1510 YNLYAISCHSGILGGGHYVTYAKNPNCKWYCYNDSSCKELHPDEIDTDSAYILFYEQQ 1567
>SNUT2_HUMAN (Q53GS9) U4/U6.U5 tri-snRNP-associated protein 2 (U4/U6.U5| tri-snRNP-associated 65 kDa protein) (65K) (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) Length = 565 Score = 50.8 bits (120), Expect = 4e-06 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKH--YRLYAISNHYGNMGGGHYT 495 RF+ F K T V+FPI+++DL Y++ E + +K+ Y L A H G G Y Sbjct: 456 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYR 515 Query: 494 ASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + G G W++ D VT I I + AY+ ++R Sbjct: 516 IHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKR 554
>SNUT2_MOUSE (Q3TIX9) U4/U6.U5 tri-snRNP-associated protein 2 (Inactive| ubiquitin-specific peptidase 39) Length = 564 Score = 50.8 bits (120), Expect = 4e-06 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKH--YRLYAISNHYGNMGGGHYT 495 RF+ F K T V+FPI+++DL Y++ E + +K+ Y L A H G G Y Sbjct: 455 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYR 514 Query: 494 ASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + G G W++ D VT I I + AY+ ++R Sbjct: 515 IHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKR 553
>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2) Length = 1406 Score = 50.4 bits (119), Expect = 5e-06 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Frame = -3 Query: 581 ATENEQPNKH----YRLYAISNHYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIK 414 +T++++ + H Y LYAIS H G + GGHY W+ ++D + D I Sbjct: 1298 STDDQREDTHIKPIYNLYAISCHSGILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEID 1357 Query: 413 TAAAYVLFYRRE 378 T +AY+LFY ++ Sbjct: 1358 TDSAYILFYEQQ 1369
>SNUT2_PONPY (Q5R761) U4/U6.U5 tri-snRNP-associated protein 2 (Inactive| ubiquitin-specific peptidase 39) Length = 565 Score = 50.1 bits (118), Expect = 6e-06 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENE--QPNKHYRLYAISNHYGNMGGGHYT 495 RF+ F K T V+FPI+++DL Y++ E + N Y L A H G G Y Sbjct: 456 RFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHENTTYDLIANIVHDGKPSEGSYR 515 Query: 494 ASICQEGKG-WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + G G W++ D VT I I + AY+ ++R Sbjct: 516 IHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKR 554
>UBP4_YEAST (P32571) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Vacuole biogenesis protein SSV7) Length = 926 Score = 49.7 bits (117), Expect = 8e-06 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 20/107 (18%) Frame = -3 Query: 641 NKLETFVDFPISDLDLSSYIATE-----------------NEQPNKHYRLYAISNHYGNM 513 NK FV +P LDL+ + A + + P Y LY ++ H+G + Sbjct: 818 NKNNDFVIYPFL-LDLTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFGTL 876 Query: 512 GGGHYTASICQEG--KGWHKFDDECVTPI-SEDNIKTAAAYVLFYRR 381 GGHYTA + ++G KGW FDD P+ ++ + + AYVLFY R Sbjct: 877 YGGHYTAYV-KKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLFYHR 922
>UBPW_MOUSE (Q61068) Ubiquitin carboxyl-terminal hydrolase DUB-1 (EC 3.1.2.15)| (Ubiquitin thioesterase DUB-1) (Ubiquitin-specific processing protease DUB-1) (Deubiquitinating enzyme 1) Length = 526 Score = 49.3 bits (116), Expect = 1e-05 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Frame = -3 Query: 659 YTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMG-GGHYTASIC 483 ++ FT NKL+ V +P LDL Y++ P Y LYA+ H G GHY + Sbjct: 256 FSAFTGNKLDRKVSYP-EFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSHSGHYFCCVK 313 Query: 482 QEGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 W+K DD VT ++ AYVLFY Sbjct: 314 AGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 345
>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) (Disrupter of telomere silencing protein 4) Length = 792 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 +F + + +K++ V +P+ LDL+ Y ++ E P K+ L + + ++ GHY A Sbjct: 638 KFRFNGTSSSKMKQAVSYPMF-LDLTEYCESK-ELPVKYQLLSVVVHEGRSLSSGHYIAH 695 Query: 488 ICQEGKGWHKFDDECVTPISE-DNIKTAAAYVLFYRR 381 Q W +DDE + ISE D +K AY L Y R Sbjct: 696 CKQPDGSWATYDDEYINIISERDVLKEPNAYYLLYTR 732
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 1/94 (1%) Frame = -3 Query: 659 YTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYG-NMGGGHYTASIC 483 + FT K+ V +P LD+ Y++ N +P Y LYA+ H G N GHY I Sbjct: 320 FANFTGGKIAKDVKYP-EYLDIRPYMSQPNGEPIV-YVLYAVLVHTGFNCHAGHYFCYIK 377 Query: 482 QEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 W++ +D V+ ++ + AYVLFY R Sbjct: 378 ASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 411
>UBP1_ARATH (Q9FPT5) Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15)| (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) (Deubiquitinating enzyme 1) (AtUBP1) Length = 1083 Score = 46.2 bits (108), Expect = 9e-05 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 14/101 (13%) Frame = -3 Query: 641 NKLETFVDFPISDLDLSSYIATE-NEQPNKHYRLYAISNHYGNMGGGHYTASICQEGKG- 468 +KL VDF +DLS Y+ T +E+ YRL + H G M GHY + I K Sbjct: 983 SKLSGHVDFQ-EFIDLSKYMDTRCSEEDEPVYRLAGLVEHLGAMSRGHYVSYIRGGHKER 1041 Query: 467 ------------WHKFDDECVTPISEDNIKTAAAYVLFYRR 381 W+ D V P S + + + AY+LFY R Sbjct: 1042 RDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYER 1082
>UBP9_SCHPO (Q9P7V9) Probable ubiquitin carboxyl-terminal hydrolase 9 (EC| 3.1.2.15) (Ubiquitin thioesterase 9) (Ubiquitin-specific processing protease 9) (Deubiquitinating enzyme 9) Length = 585 Score = 45.4 bits (106), Expect = 2e-04 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 12/76 (15%) Frame = -3 Query: 578 TENEQPNKHYRLYAISNHYGNMGGG----HYTASICQEGKGWHKFDDECVTPISEDNIK- 414 T E R+Y +S+ ++GGG HY + + + GW FDDE VTP++E+ ++ Sbjct: 346 TTTEDAENAERMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQR 405 Query: 413 -------TAAAYVLFY 387 A AYVLFY Sbjct: 406 FFGDQPGQATAYVLFY 421
>UBP9_YEAST (P39967) Ubiquitin carboxyl-terminal hydrolase 9 (EC 3.1.2.15)| (Ubiquitin thioesterase 9) (Ubiquitin-specific-processing protease 9) (Deubiquitinating enzyme 9) Length = 754 Score = 45.1 bits (105), Expect = 2e-04 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%) Frame = -3 Query: 668 RFSYTQFTRNKLETF--VDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGN-MGGGHY 498 RF Y++ ++ ++ F + +P++ LD+SS T N K Y L + H G+ GHY Sbjct: 564 RFKYSEEQKSNIKLFNKILYPLT-LDVSS---TFNTSVYKKYELSGVVIHMGSGPQHGHY 619 Query: 497 TASICQEGKGWHKFDDECVTPISEDNI--------KTAAAYVLFYR 384 E GW +DDE V I E+ + AYVLFY+ Sbjct: 620 VCICRNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTTAYVLFYK 665
>UBP21_SCHPO (Q9UTT1) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)| (Ubiquitin thioesterase 21) (Ubiquitin-specific processing protease 21) (Deubiquitinating enzyme 21) Length = 1129 Score = 44.3 bits (103), Expect = 3e-04 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Frame = -3 Query: 620 DFPISDLDLSSYIATENEQPNKH-YRLYAISNHYGNMGGGHYTASICQE-GKGWHKFDDE 447 +FP+ ++DL Y++ ++ H Y L+ + H G++ GGHY A I E W KFDD+ Sbjct: 442 EFPL-EIDLEPYLSETADKSESHVYVLHGVLVHGGDLHGGHYYALIKPEKDSNWFKFDDD 500 Query: 446 CVT-----PISEDN 420 VT + EDN Sbjct: 501 RVTRATIKEVLEDN 514
>UBP5_SCHPO (Q09879) Probable ubiquitin carboxyl-terminal hydrolase 5 (EC| 3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific processing protease 5) (Deubiquitinating enzyme 5) Length = 1108 Score = 43.9 bits (102), Expect = 4e-04 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%) Frame = -3 Query: 668 RFSYTQFTRN---KLETFVDFPISDLDLSSYIATENEQP-NKHYRLYAISNHYGNMGGGH 501 RF Y F R+ K+ +FP+ + D ++++ E +Q N Y LY + H G++ GH Sbjct: 407 RFEY-DFERDMMIKINDRYEFPL-EFDAKAFLSPEADQSQNCEYVLYGVLVHSGDLHNGH 464 Query: 500 YTASICQEGKG-WHKFDDECVT 438 Y A + E G W+K+DD VT Sbjct: 465 YYALLKTEKDGPWYKYDDTRVT 486
>UBP7_YEAST (P40453) Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15)| (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) Length = 1071 Score = 43.1 bits (100), Expect = 7e-04 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTAS 489 RF Y +N T V +P+ + + I N+ Y+L+ + NH G + GHYT+ Sbjct: 967 RFYYDLTKKNN--TVVTYPL----ILNIILKNND--TMKYKLFGVVNHTGTLISGHYTSL 1018 Query: 488 ICQE-------GKG-WHKFDDECVTPI----SEDNIKTAAA--YVLFYRR 381 + ++ G+ W+ FDDE V S+ N+K +++ YVLFY R Sbjct: 1019 VNKDLEHNVNIGRSKWYYFDDEVVKADRKHGSDKNLKISSSDVYVLFYER 1068
>UBP8_SCHPO (Q09738) Probable ubiquitin carboxyl-terminal hydrolase 8 (EC| 3.1.2.15) (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) Length = 449 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = -3 Query: 566 QPNKHYRLYAISNHYGNMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 Q + Y+LY++ H G + GHY A + + W DD + + E + + AY+LFY Sbjct: 374 QDDVDYQLYSVVCHKGTLDTGHYIAYTYYQNQ-WFLLDDTTIVEVKESEVLNSQAYLLFY 432
>UBP3_YEAST (Q01477) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 912 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 12/100 (12%) Frame = -3 Query: 644 RNKLETFVDFPISDLDLSSYIATENEQ--PNKHYRLYAISNHYG-NMGGGHYTASICQ-E 477 R K++ + I + +SS N ++ Y+L + H+G + GGHYTA + E Sbjct: 811 RKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSE 870 Query: 476 GKGWHKFDDECVTPISEDNI--------KTAAAYVLFYRR 381 W++ DD +T + +D++ + AY+L Y++ Sbjct: 871 HNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>UBP7_HUMAN (Q93009) Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15)| (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease) Length = 1102 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = -3 Query: 668 RFSYTQFTRN--KLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYT 495 RF Y T K+ +FP L L ++ + + +Y L+A+ H G+ GGHY Sbjct: 408 RFMYDPQTDQNIKINDRFEFP-EQLPLDEFLQKTDPKDPANYILHAVLVHSGDNHGGHYV 466 Query: 494 ASICQEGKG-WHKFDDECVTPISED 423 + +G G W KFDD+ V+ +++ Sbjct: 467 VYLNPKGDGKWCKFDDDVVSRCTKE 491
>UBP2_ARATH (Q8W4N3) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) (AtUBP2) Length = 961 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 11/85 (12%) Frame = -3 Query: 602 LDLSSYIATE--NEQPNKHYRLYAISNHYGNMGGGHYTASIC---------QEGKGWHKF 456 +DL Y+ + E P YRL + H G M GGHY A + W+ Sbjct: 873 IDLRQYMDSRCSGEDPPV-YRLAGLVEHSGTMRGGHYVAYVRGGQRVKETDSSSTAWYNV 931 Query: 455 DDECVTPISEDNIKTAAAYVLFYRR 381 D V +S + + + AY+LFY R Sbjct: 932 SDAYVRQVSLEKVLHSEAYILFYER 956
>UBP47_HUMAN (Q96K76) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1375 Score = 40.8 bits (94), Expect = 0.004 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQ-EGKGWHKFDDECVTPISEDNIK 414 Y L+++ H G+ GGHY A I + W+ FDD+ V+ I++++IK Sbjct: 487 YELFSVMAHSGSAAGGHYYACIKSFSDEQWYSFDDQHVSRITQEDIK 533
>UBP16_HUMAN (Q9Y5T5) Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15)| (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16) (Deubiquitinating enzyme 16) (Ubiquitin-processing protease UBP-M) Length = 823 Score = 40.4 bits (93), Expect = 0.005 Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 28/124 (22%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATE-----NEQPNKHYRLYAISNHYGNMGGG 504 RF F K+ + FP LDL+ + + E Y LY + H G M G Sbjct: 699 RFQQAGFNLRKVNKHIKFP-EILDLAPFCTLKCKNVAEENTRVLYSLYGVVEHSGTMRSG 757 Query: 503 HYTA----------------------SICQEGKG-WHKFDDECVTPISEDNIKTAAAYVL 393 HYTA E KG W D V + + + AY+L Sbjct: 758 HYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQAYLL 817 Query: 392 FYRR 381 FY R Sbjct: 818 FYER 821
>UBP13_YEAST (P38187) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15)| (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) Length = 688 Score = 40.0 bits (92), Expect = 0.006 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 13/109 (11%) Frame = -3 Query: 668 RFSYTQFTRNKLETF--VDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGG---G 504 RF Y++ ++ F + +P++ L++ S I N + + Y L I H G GG G Sbjct: 565 RFKYSEKQNCNIKLFNNIHYPLT-LNVCSSI---NSKVCQKYELAGIVVHMG--GGPQHG 618 Query: 503 HYTASICQEGKGWHKFDDECVTPISEDNI--------KTAAAYVLFYRR 381 HY + E GW FDDE V + E+ + A AYV F +R Sbjct: 619 HYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATAYVCFIKR 667
>UBP18_MOUSE (Q9WTV6) Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl| thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease) Length = 368 Score = 40.0 bits (92), Expect = 0.006 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 17/113 (15%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATEN------EQPNKHYRLYAISNHYGNMGG 507 RFS K+ V+FP S LD S + TE EQ HY L+A+ H G Sbjct: 254 RFSARNSRTEKICHSVNFPQS-LDFSQVLPTEEDLGDTKEQSEIHYELFAVIAHVGMADF 312 Query: 506 GHYTASICQEGKG-WHKFDDECVTPISEDNIKTA----------AAYVLFYRR 381 GHY A I G W F+D V ++ +++ AY+L Y + Sbjct: 313 GHYCAYIRNPVDGKWFCFNDSHVCWVTWKDVQCTYGNHRYRWRETAYLLVYTK 365
>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)| (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = -3 Query: 659 YTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYG-NMGGGHYTASIC 483 + F+ K+ V +P L++ Y++ N P Y LYA+ H G + GHY + Sbjct: 331 FANFSGGKITKDVGYP-EFLNIRPYMSQNNGDPVM-YGLYAVLVHSGYSCHAGHYYCYVK 388 Query: 482 QEGKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 W++ +D V + + AYVLFY R Sbjct: 389 ASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 422
>USP9X_MOUSE (P70398) Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X-linked) (Ubiquitin-specif Length = 2559 Score = 38.9 bits (89), Expect = 0.014 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Frame = -3 Query: 590 SYIATENEQPNKH------YRLYAISNHYGNMGGGHYTASICQEGKG------WHKFDDE 447 S + +NEQ YRL + H G GGHY + I Q G W+KFDD Sbjct: 1844 SQLIQQNEQSESEKAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDG 1903 Query: 446 CVTPISEDN 420 VT D+ Sbjct: 1904 DVTECKMDD 1912
>UBP29_HUMAN (Q9HBJ7) Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15)| (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29) Length = 922 Score = 38.9 bits (89), Expect = 0.014 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Frame = -3 Query: 563 PNKHYRLYAISNHYGNM-GGGHYTASICQ-EGKGWHKFDDECVTPISEDNIKTA---AAY 399 P + YRL ++ +H G+ GHY + + + + W ++D CV+ ISE ++ A + Y Sbjct: 819 PLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGY 878 Query: 398 VLFY 387 + FY Sbjct: 879 IFFY 882
>UBPE_DROME (Q24574) Ubiquitin carboxyl-terminal hydrolase 64E (EC 3.1.2.15)| (Ubiquitin thioesterase 64E) (Ubiquitin-specific-processing protease 64E) (Deubiquitinating enzyme 64E) Length = 1556 Score = 38.9 bits (89), Expect = 0.014 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Frame = -3 Query: 602 LDLSSYIATENEQPNKHY--RLYAISNHYGNMGGGHYTASICQ-EGKGWHKFDDECVTPI 432 +D+SS + +Q + Y L+AI H G+ GGHY A I + W F+D+ VT I Sbjct: 685 IDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIKDFDNNEWFCFNDQNVTSI 744 Query: 431 SEDNIK 414 ++++I+ Sbjct: 745 TQEDIQ 750
>UBP2_KLULA (O42726) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) Length = 1220 Score = 38.5 bits (88), Expect = 0.018 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Frame = -3 Query: 599 DLSSYIATE-NEQPNKHYRLYAISNHYGNMGGGHYTASICQEGKG--WHKFDDECVTPIS 429 DL + I+ + +E + Y L+A+ H G GHY I K W K++D+ VT + Sbjct: 1120 DLETTISQQFSEFKHIGYSLFAVFIHRGEASYGHYWVYIKDHTKNGIWRKYNDDSVTEVP 1179 Query: 428 EDNI------KTAAAYVLFYRRE 378 + + TA Y L Y RE Sbjct: 1180 QSEVFNFTEGNTATPYFLVYVRE 1202
>UBP11_YEAST (P36026) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)| (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11) Length = 717 Score = 38.5 bits (88), Expect = 0.018 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 17/74 (22%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQE--------GKGWHKFDDECVTPISED--------- 423 Y+LY NH GN+ GHYT+ + +E + W FDD+ + +D Sbjct: 633 YKLYGTVNHSGNLINGHYTSVVNKEKSHEIGLNRQVWVTFDDDYIQQHRKDRNNFEAGKT 692 Query: 422 NIKTAAAYVLFYRR 381 + + YVLFY R Sbjct: 693 EMSSDEVYVLFYER 706
>USP9X_HUMAN (Q93008) Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein related, X-linked) (Ubiquitin-specif Length = 2547 Score = 38.5 bits (88), Expect = 0.018 Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Frame = -3 Query: 659 YTQFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTASICQ 480 YT KLE P S L S + + YRL + H G GGHY + I Q Sbjct: 1820 YTVAGVAKLEGDNVNPESQLIQQSEQSESETAGSTKYRLVGVLVHSGQASGGHYYSYIIQ 1879 Query: 479 EGKG------WHKFDDECVTPISEDN 420 G W+KFDD VT D+ Sbjct: 1880 RNGGDGERNRWYKFDDGDVTECKMDD 1905
>UBP47_MOUSE (Q8BY87) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1376 Score = 38.1 bits (87), Expect = 0.024 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 569 EQPNKHYRLYAISNHYGNMGGGHYTASICQ-EGKGWHKFDDECVTPISEDNIK 414 E+ + Y L+++ H G+ GGHY A I W+ F+D+ V+ I++++IK Sbjct: 481 EKNSLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIK 533
>UBP25_HUMAN (Q9UHP3) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)| (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21) Length = 1087 Score = 37.7 bits (86), Expect = 0.031 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 13/97 (13%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQEGKG-WHKFDDECVTPISEDNI--------KTAAAY 399 YRL+A+ H G GHY A I + W K++D VT S + + + A+AY Sbjct: 591 YRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAY 650 Query: 398 VLFYRRE*STAPVQKHCSLE----LYSVWILPISLLD 300 L Y + + +Q+ + E L + LP L D Sbjct: 651 CLMYINDKAQFLIQEEFNKETGQPLVGIETLPPDLRD 687
>UBP7_SCHPO (Q9P7S5) Probable ubiquitin carboxyl-terminal hydrolase 7 (EC| 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific processing protease 7) (Deubiquitinating enzyme 7) Length = 875 Score = 37.7 bits (86), Expect = 0.031 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 23/109 (21%) Frame = -3 Query: 638 KLETFVDFPISDLDLSSYIATENEQPNK-HYRLYAISNHYGNMGGGHYTASICQE----- 477 K+ F++F +LDL+ ++ + YRL+ + H G + GHY A + Sbjct: 767 KISDFIEFE-QELDLNEFVMPHLRASSSFRYRLFGVIVHSGTLNYGHYVAYVLSHKFLDL 825 Query: 476 -----------------GKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 + W D V S D + AY+LFY R Sbjct: 826 SAPSTNSKDFRSEAGIPERRWLYISDNIVRESSWDEVSKVEAYMLFYER 874
>UBP4_SCHPO (O60139) Probable ubiquitin carboxyl-terminal hydrolase 4 (EC| 3.1.2.15) (Ubiquitin thioesterase 4) (Ubiquitin-specific processing protease 4) (Deubiquitinating enzyme 4) Length = 438 Score = 37.7 bits (86), Expect = 0.031 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Frame = -3 Query: 554 HYRLYAISNHYGNMGGGHYTASICQEGKGWHKFDDECV------TPISEDNIKTAAAYVL 393 +Y L+A HYG + GHY + + + W DD V T + ED +++Y+L Sbjct: 358 NYNLFAFICHYGQLENGHYISDVLFNNE-WCHIDDSIVRTVGGITDLRED---FSSSYIL 413 Query: 392 FYRR 381 FY+R Sbjct: 414 FYKR 417
>UBP44_HUMAN (Q9H0E7) Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15)| (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44) Length = 712 Score = 37.4 bits (85), Expect = 0.041 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = -3 Query: 551 YRLYAISNHYGN-MGGGHYTASICQ-EGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 Y L A+ H+G G GHYTA EG W +D ++ + D + A AY+LFY Sbjct: 619 YDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFY 675
>UBP26_MOUSE (Q99MX1) Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15)| (Ubiquitin thioesterase 26) (Ubiquitin-specific-processing protease 26) (Deubiquitinating enzyme 26) Length = 835 Score = 37.0 bits (84), Expect = 0.054 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Frame = -3 Query: 572 NEQPNKHYRLYAISNHYGNM-GGGHYTASICQ-EGKGWHKFDDECVTPISEDNI---KTA 408 N++ + YRL I NH GN GGHY + + W + D VT ED + +++ Sbjct: 747 NKKEDNVYRLVNIINHIGNSPNGGHYINDAFDFKRQSWFTYSDLHVTRTQEDFVYRGRSS 806 Query: 407 AAYVLFY 387 YV FY Sbjct: 807 TGYVFFY 813
>UBP28_CHICK (Q5ZID5) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)| (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28) Length = 1047 Score = 36.6 bits (83), Expect = 0.070 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 9/64 (14%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASIC-QEGKGWHKFDDECVTPISED--------NIKTAAAY 399 Y L+A+ H G GHY A I Q K W K++D VT S + ++ A+AY Sbjct: 585 YHLHAVLVHEGQANAGHYWAFIYDQPRKSWLKYNDISVTESSWEELERDSFGGLRNASAY 644 Query: 398 VLFY 387 L Y Sbjct: 645 CLMY 648
>UBP14_ARATH (Q8L6Y1) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) Length = 797 Score = 36.6 bits (83), Expect = 0.070 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Frame = -3 Query: 611 ISDLDLSSYIATENEQPNK------HYRLYAISNHYG-NMGGGHYTASICQEGKGWHKFD 453 +SD+D+SS + + + Y+L+ I +H G ++ GHY A I +EG+ W F+ Sbjct: 715 VSDMDVSSSNSAQTPAQSGLPDGGGKYKLFGIVSHMGTSVHCGHYVAHILKEGR-WVIFN 773 Query: 452 DECVTPISEDNIKTAAAYVLFYRR 381 D+ V IS D K YV F++R Sbjct: 774 DDKV-GISTDPPKD-MGYVYFFQR 795
>UBP6_YEAST (P43593) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) Length = 499 Score = 36.6 bits (83), Expect = 0.070 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 10/74 (13%) Frame = -3 Query: 575 ENEQPNKHYRLYAISNHYG-NMGGGHYTASICQE--GKGWHKFDDECVTPISEDNIKTAA 405 + E P+ Y L + H G N GHY A I E W+KF+D+ V+ + ++ I++ A Sbjct: 422 KGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLA 481 Query: 404 -------AYVLFYR 384 A +L Y+ Sbjct: 482 GGGESDSALILMYK 495
>UBP25_MOUSE (P57080) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)| (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (mUSP25) Length = 1055 Score = 36.2 bits (82), Expect = 0.092 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQEGKG-WHKFDDECVTPISEDNI--------KTAAAY 399 YRL+A+ H G GHY A I + W K++D VT S + + + A+AY Sbjct: 592 YRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAY 651 Query: 398 VLFY 387 L Y Sbjct: 652 CLMY 655
>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 685 Score = 36.2 bits (82), Expect = 0.092 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -3 Query: 551 YRLYAISNHYGN-MGGGHYTASICQ-EGKGWHKFDDECVTPISEDNIKTAAAYVLFYRR 381 Y L A+ H+G G GHYTA EG W +D + S + + AY+LFY R Sbjct: 595 YDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFYTR 653
>UBP28_HUMAN (Q96RU2) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)| (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28) Length = 1077 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASIC-QEGKGWHKFDDECVTPISEDNI--------KTAAAY 399 YRL+A+ H G GHY A I Q + W K++D VT S + + + +AY Sbjct: 584 YRLHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVERDSYGGLRNVSAY 643 Query: 398 VLFY 387 L Y Sbjct: 644 CLMY 647
>USP9Y_HUMAN (O00507) Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-Y) (Ubiquitin-specific-processing protease FAF-Y) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y-linked) (Ubiquitin-specif Length = 2555 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQ-EGKG-----WHKFDDECVTPISEDN 420 YRL + H G GGHY + I Q GK W+KFDD VT D+ Sbjct: 1865 YRLVGVLVHSGQASGGHYYSYIIQRNGKDDQTDHWYKFDDGDVTECKMDD 1914
>UBP4_ARATH (Q8LAM0) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (AtUBP4) Length = 365 Score = 35.4 bits (80), Expect = 0.16 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = -3 Query: 668 RFSYT-QFTR-NKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGN-MGGGHY 498 RF Y Q R KL V FP+ +L LS+ T +E + Y L+A+ H G+ GHY Sbjct: 256 RFKYMEQLGRYKKLSYRVVFPL-ELKLSN---TVDEYVDIEYSLFAVVVHVGSGPNHGHY 311 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIKT 411 S+ + W FDDE V I E ++T Sbjct: 312 V-SLVKSHNHWLFFDDESVEIIEESAVQT 339
>UBP2_YEAST (Q01476) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) (Deubiquitinating enzyme 2) Length = 1272 Score = 35.4 bits (80), Expect = 0.16 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQEGKG--WHKFDDECVTPISEDNI------KTAAAYV 396 Y L+++ H G GHY I + W K++DE ++ + E+ + TA Y Sbjct: 1193 YSLFSVFIHRGEASYGHYWIYIKDRNRNGIWRKYNDETISEVQEEEVFNFNEGNTATPYF 1252 Query: 395 LFYRRE 378 L Y ++ Sbjct: 1253 LVYVKQ 1258
>UBP14_RABIT (P40826) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 35.0 bits (79), Expect = 0.20 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Frame = -3 Query: 554 HYRLYAISNHYG-NMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAA-------AY 399 +Y L A+ H G + GHY + + ++ W KFDD+ V+ ++ ++I + AY Sbjct: 415 YYDLQAVLTHQGRSSSSGHYVSWVKRKHDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAY 474 Query: 398 VLFY 387 VL Y Sbjct: 475 VLLY 478
>UBP14_PANTR (P60051) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 35.0 bits (79), Expect = 0.20 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Frame = -3 Query: 554 HYRLYAISNHYG-NMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAA-------AY 399 +Y L A+ H G + GHY + + ++ W KFDD+ V+ ++ ++I + AY Sbjct: 416 YYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAY 475 Query: 398 VLFY 387 VL Y Sbjct: 476 VLLY 479
>UBP14_MOUSE (Q9JMA1) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 35.0 bits (79), Expect = 0.20 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Frame = -3 Query: 554 HYRLYAISNHYG-NMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAA-------AY 399 +Y L A+ H G + GHY + + ++ W KFDD+ V+ ++ ++I + AY Sbjct: 415 YYDLQAVLTHQGRSSSSGHYVSWVRRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAY 474 Query: 398 VLFY 387 VL Y Sbjct: 475 VLLY 478
>UBP49_HUMAN (Q70CQ1) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 688 Score = 35.0 bits (79), Expect = 0.20 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -3 Query: 551 YRLYAISNHYGN-MGGGHYTASICQ-EGKGWHKFDDECVTPISEDNIKTAAAYVLFY 387 Y L A+ H+G G GHYTA EG W +D + S + + AY+LFY Sbjct: 598 YDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYILFY 654
>UBP15_YEAST (P50101) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) Length = 1230 Score = 35.0 bits (79), Expect = 0.20 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%) Frame = -3 Query: 665 FSYTQFTRNKLETFVDFPISDLDLSSYIA---------TENEQPNKH-YRLYAISNHYGN 516 F+Y Q K+ +FP +DLS ++ +EN+ N + Y L+ + H G+ Sbjct: 404 FNYDQMV--KVNDKYEFP-ETIDLSPFVDKDVLKKTLDSENKDKNPYVYNLHGVLVHSGD 460 Query: 515 MGGGHYTASICQEGKG-WHKFDDECVTPISEDNI 417 + GHY I + W++FDDE V +++ + Sbjct: 461 ISTGHYYTLIKPGVEDQWYRFDDERVWRVTKKQV 494
>UBP14_HUMAN (P54578) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 493 Score = 35.0 bits (79), Expect = 0.20 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Frame = -3 Query: 554 HYRLYAISNHYG-NMGGGHYTASICQEGKGWHKFDDECVTPISEDNIKTAA-------AY 399 +Y L A+ H G + GHY + + ++ W KFDD+ V+ ++ ++I + AY Sbjct: 416 YYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAY 475 Query: 398 VLFY 387 VL Y Sbjct: 476 VLLY 479
>UBP28_MOUSE (Q5I043) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)| (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28) (Deubiquitinating enzyme 28) Length = 1051 Score = 34.7 bits (78), Expect = 0.27 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASIC-QEGKGWHKFDDECVTPISED--------NIKTAAAY 399 YRL+A+ H G GHY A I Q + W K++D VT S + ++ +AY Sbjct: 589 YRLHAVLVHEGQASAGHYWAYIYNQPRQTWLKYNDISVTESSWEELERDSYGGLRNVSAY 648 Query: 398 VLFY 387 L Y Sbjct: 649 CLMY 652
>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC| 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific processing protease 3) (Deubiquitinating enzyme 3) Length = 512 Score = 33.9 bits (76), Expect = 0.45 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 18/75 (24%) Frame = -3 Query: 551 YRLYAISNHYG-NMGGGHYTASICQEGK-GWHKFDDECV--TPISE-DNIKTAA------ 405 Y L A+ H+G + GGHYT + Q K GW + DD + PI + +N + +A Sbjct: 436 YDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSELSADPSLSK 495 Query: 404 -------AYVLFYRR 381 AY+LFY R Sbjct: 496 LGHGDRVAYLLFYTR 510
>UBP18_HUMAN (Q9UMW8) Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl| thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease) (hUBP43) Length = 372 Score = 33.5 bits (75), Expect = 0.59 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 18/114 (15%) Frame = -3 Query: 668 RFSYTQFTRNKLETFVDFPISDLDLSSYIATENE------QPNKHYRLYAISNHYGNMGG 507 RFS K+ + FP S LD S + + E Q Y L+A+ H G Sbjct: 258 RFSIRNSQTRKICHSLYFPQS-LDFSQILPMKRESCDAEEQSGGQYELFAVIAHVGMADS 316 Query: 506 GHYTASI--CQEGKGWHKFDDECVTPISEDNIKTA----------AAYVLFYRR 381 GHY I +GK W F+D + +S ++I+ AY+L Y + Sbjct: 317 GHYCVYIRNAVDGK-WFCFNDSNICLVSWEDIQCTYGNPNYHWQETAYLLVYMK 369
>UBP30_HUMAN (Q70CQ3) Ubiquitin carboxyl-terminal hydrolase 30 (EC 3.1.2.15)| (Ubiquitin thioesterase 30) (Ubiquitin-specific-processing protease 30) (Deubiquitinating enzyme 30) Length = 517 Score = 33.5 bits (75), Expect = 0.59 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTA---------SICQEGKGWHKFDDECVTPISEDNIKTAAAY 399 +RL A+ H+G+M GH+ + W D+ V S + +++AY Sbjct: 436 FRLMAVVVHHGDMHSGHFVTYRRSPPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAY 495 Query: 398 VLFYRR 381 +LFY R Sbjct: 496 LLFYER 501
>UBP11_SCHPO (Q9UUD6) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)| (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11) Length = 350 Score = 33.1 bits (74), Expect = 0.78 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%) Frame = -3 Query: 668 RFSYT--QFTRNKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYT 495 R SYT TRN + + FP S + +N+ HY L ++ H G++ GHY Sbjct: 257 RTSYTCQGLTRNNVS--ISFP-------SKLILKNKH---HYILRSLITHSGSVTYGHYL 304 Query: 494 ASICQEGKGWHKFDDECVT--PISEDNIKTAAAYVLFYRRE 378 Q+ W K +D +T ++E +T +A +LFY E Sbjct: 305 CYRLQDDI-WWKANDSLITKSSLNEALSQTRSACLLFYEME 344
>UBP3_ARATH (O24454) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) (AtUBP3) Length = 371 Score = 33.1 bits (74), Expect = 0.78 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = -3 Query: 668 RFSYT-QFTR-NKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGN-MGGGHY 498 RF Y Q R KL V FP+ +L LS+ T + Y L+A+ H G+ GHY Sbjct: 261 RFKYIEQLGRYKKLSYRVVFPL-ELKLSN---TVEPYADVEYSLFAVVVHVGSGPNHGHY 316 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIKT 411 S+ + W FDDE V I E ++T Sbjct: 317 V-SLVKSHNHWLFFDDENVEMIEESAVQT 344
>UBP1_YEAST (P25037) Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15)| (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) (Deubiquitinating enzyme 1) Length = 809 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -3 Query: 551 YRLYAISNHYGNMGGGHYTASICQEGKGWHKFDDECVTPISE-DNIKTAAAYVLFY 387 Y L ++ HYG GHY A G W + DE V + E + + T ++LFY Sbjct: 681 YSLRSVIVHYGTHNYGHYIAFRKYRG-CWWRISDETVYVVDEAEVLSTPGVFMLFY 735
>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC| 3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin specific-processing protease FAF) (Deubiquitinating enzyme FAF) (Protein fat facets) Length = 2778 Score = 31.6 bits (70), Expect = 2.3 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 21/97 (21%) Frame = -3 Query: 665 FSYTQFTRNKLETFVDFPISDLDLSSYIAT-------------ENEQPNKH---YRLYAI 534 + Y + K + +FP LD+ Y + +N Q N Y L I Sbjct: 1917 YDYERVCAIKFNDYFEFP-RILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGI 1975 Query: 533 SNHYGNMGGGHYTASICQEGKG-----WHKFDDECVT 438 H G GGHY + I + W+KFDD VT Sbjct: 1976 VVHSGQASGGHYFSYILSKNPANGKCQWYKFDDGEVT 2012
>CEMA_CHLRE (Q37050) Chloroplast envelope membrane protein| Length = 500 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +2 Query: 200 HSISQVLLFSCWQLNLYTLLYVLVA*EIQV 289 HSI + F L+L+TLLY+L+ EIQ+ Sbjct: 373 HSIEAITNFFADLLSLFTLLYLLITLEIQI 402
>RFCL_THEVO (Q97BC2) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 420 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 Query: 586 YDDRSKSLMGKSTNVSSLFLVNWVYENL 669 YDD KS+ G ++V S + +NWV ENL Sbjct: 261 YDDTLKSIYG--SDVDSDYFINWVEENL 286
>UBP12_HUMAN (O75317) Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)| (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12) (Deubiquitinating enzyme 12) (Ubiquitin hydrolyzing enzyme 1) Length = 355 Score = 29.6 bits (65), Expect = 8.6 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%) Frame = -3 Query: 668 RFSYT-QFTR-NKLETFVDFPISDLDLSSYIATENEQPNKHYRLYAISNHYGN-MGGGHY 498 RF Y Q R KL V FP+ +L L + + + P++ Y L A+ H G+ GHY Sbjct: 246 RFKYMDQLHRYTKLSYRVVFPL-ELRLFN-TSGDATNPDRMYDLVAVVVHCGSGPNRGHY 303 Query: 497 TASICQEGKGWHKFDDECVTPISEDNIK------------TAAAYVLFYR 384 A I + W FDD+ V I I+ + + Y+LFY+ Sbjct: 304 IA-IVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 352 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,853,213 Number of Sequences: 219361 Number of extensions: 2307770 Number of successful extensions: 6327 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 6042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6260 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
