ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags11e18 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 197 bits (502), Expect = 1e-50 Identities = 99/99 (100%), Positives = 99/99 (100%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA Sbjct: 853 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 912 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV Sbjct: 913 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 157 bits (398), Expect = 2e-38 Identities = 81/99 (81%), Positives = 90/99 (90%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 LL NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE + LFN+K+SYRELSEIAEQA Sbjct: 856 LLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSYRELSEIAEQA 913 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 914 KRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)| Length = 948 Score = 154 bits (388), Expect = 2e-37 Identities = 77/99 (77%), Positives = 88/99 (88%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 LL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ E + +FN+K+SY ELS+IAEQA Sbjct: 852 LLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSYSELSQIAEQA 909 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAE+ RLRE+NTLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 910 KRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)| Length = 949 Score = 148 bits (373), Expect = 1e-35 Identities = 71/99 (71%), Positives = 89/99 (89%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++N+TAFTTK++YG+GEREAQWA AQRTLHGL+ PE ++F D ++Y ELSEIAEQA Sbjct: 855 MIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATYTELSEIAEQA 910 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 K+RAE+ARLRE++TLKGHVESVVKLKGLDID +NQ+YTV Sbjct: 911 KKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)| Length = 954 Score = 146 bits (369), Expect = 4e-35 Identities = 72/99 (72%), Positives = 88/99 (88%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++NKTAFT+K++YGKGEREAQWA AQRTLHGLQ + + +FNDKS+YRELSEIA+QA Sbjct: 858 VIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTYRELSEIADQA 915 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAE+ARLRE +TLKGHVESVVK KGLDI+ I Q+YT+ Sbjct: 916 KRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)| Length = 948 Score = 145 bits (365), Expect = 1e-34 Identities = 75/99 (75%), Positives = 83/99 (83%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 L N+TAFTTK++YG GEREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQA Sbjct: 852 LFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSYRELSEIAEQA 909 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESV KLKGLDIDT +YTV Sbjct: 910 KRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 948
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)| Length = 948 Score = 144 bits (362), Expect = 2e-34 Identities = 75/99 (75%), Positives = 84/99 (84%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 ++ KTAFTTK++YGKGEREAQWA AQRTLHGL PE +FND + ELSEIAEQA Sbjct: 856 MINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN--ELSEIAEQA 909 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 910 KRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)| Length = 947 Score = 139 bits (351), Expect = 4e-33 Identities = 75/99 (75%), Positives = 84/99 (84%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 L +NKTAFT K++YGK EREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQA Sbjct: 852 LFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSYRELSEIAEQA 909 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 910 KRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 947
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)| Length = 948 Score = 132 bits (333), Expect = 5e-31 Identities = 71/99 (71%), Positives = 82/99 (82%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 ++ N+TAFTTK+NYG EREAQWA AQRTLHGLQ E A+ + ++ YRELSEIA QA Sbjct: 853 IIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETAN--VVPERGGYRELSEIANQA 910 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 911 KRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 948
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 130 bits (328), Expect = 2e-30 Identities = 63/99 (63%), Positives = 84/99 (84%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++ + AFT K+++GK +RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+A Sbjct: 861 VIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEA 917 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 918 KRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 130 bits (328), Expect = 2e-30 Identities = 64/99 (64%), Positives = 84/99 (84%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +L+ + AFT K+++GK RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+A Sbjct: 861 VLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEA 917 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 918 KRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 127 bits (320), Expect = 2e-29 Identities = 63/99 (63%), Positives = 82/99 (82%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 + + + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+A Sbjct: 862 VFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNFNELNQLAEEA 918 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 919 KRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)| (Fragment) Length = 704 Score = 127 bits (319), Expect = 2e-29 Identities = 63/99 (63%), Positives = 83/99 (83%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +L+ + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+A Sbjct: 609 VLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNFNELNQLAEEA 665 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIAR REL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 666 KRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 127 bits (318), Expect = 3e-29 Identities = 62/99 (62%), Positives = 83/99 (83%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++ + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F +++ + ELS++AE+A Sbjct: 861 VIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK---MFPERTHFNELSQMAEEA 917 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 918 KRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)| Length = 960 Score = 126 bits (316), Expect = 5e-29 Identities = 62/99 (62%), Positives = 82/99 (82%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++ + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F D++ EL+++AE+A Sbjct: 865 VIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHVSELNQMAEEA 921 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 KRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 922 KRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)| Length = 961 Score = 96.3 bits (238), Expect = 6e-20 Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 1/100 (1%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +++ +TA T K+N+G+ ER A WAT +RT HGL+ + + +++S EL+ +AE+A Sbjct: 866 MVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSATELNNMAEEA 921 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTIN-QNYTV 279 KRRAEIAR+REL TLKG VES KLKG D++ N NYT+ Sbjct: 922 KRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 61.6 bits (148), Expect = 2e-09 Identities = 39/99 (39%), Positives = 55/99 (55%) Frame = -1 Query: 575 LLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQA 396 +L KTAFT K++YGK + +QR S + + S S IAEQ Sbjct: 860 VLDRKTAFTYKKDYGKDDGSPNVTISQR-----------SRSAEELRGSRSRASWIAEQT 908 Query: 395 KRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 279 +RRAEIARL E++++ H+ESV+KLK +D I +TV Sbjct: 909 RRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (Fragments) Length = 110 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -1 Query: 506 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 393 A A +TLHGLQAPE S L NDK ELSEIAEQAK Sbjct: 77 APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -1 Query: 518 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 348 E Q Q L +Q PEPA L D REL E + K+R E R REL LK Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495 Query: 347 GHVESVVKLKGLDIDTINQNY 285 G ++ V + +++ + Q Y Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 35.8 bits (81), Expect = 0.090 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -1 Query: 572 LQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 393 LQN +E + EAQ Q L Q+P+ +L D REL E + K Sbjct: 412 LQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGK 471 Query: 392 RRAE---IARLRELNTLKGHVESVVKLKGLDIDTINQNY 285 +R E R REL LKG ++ V +++ + Y Sbjct: 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQY 510
>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen) Length = 1128 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -1 Query: 506 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 327 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204 Query: 326 KLKGLDIDTINQ 291 G ++ I Q Sbjct: 205 LSNGKLVEEIEQ 216
>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 30.0 bits (66), Expect = 4.9 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = -1 Query: 569 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 393 + K + + GK R + + RT P P SH+ +++SS+R S ++ + Sbjct: 79 RRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138 Query: 392 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 297 R+ RE KG + V +K D I Sbjct: 139 RKVRDKEKREKEKDKGKDKEVHSIKRGDSGNI 170
>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells| missing homolog 2) (GCM motif protein 2) (mGCMb) Length = 504 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = -1 Query: 488 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 309 +H PE S T + R+++ + KRR+E R ++GH+ S L+ + Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215 Query: 308 I 306 + Sbjct: 216 L 216
>SMG_DROME (Q23972) Protein Smaug| Length = 999 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 Query: 294 PKLHRVRNLGIGPNNMTSVLERDWNG 217 PK+H V+ G+GPNN ++ + WNG Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -1 Query: 506 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 327 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164 Query: 326 KLKGLDIDTINQ 291 G ++ I Q Sbjct: 165 LSNGKLVEEIEQ 176
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = -1 Query: 551 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 372 T KE Y K ++++W + T++ L+ +L S + + E+A ++ A Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491 Query: 371 LRELNTLKGHVESVV 327 EL TLK +E V Sbjct: 492 KTELKTLKDQLEKSV 506
>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)| Length = 1197 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 336 VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 211 V GE QGP H L R R G+GP + E +WN AP Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157
>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -2 Query: 520 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 377 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -2 Query: 520 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 377 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 29.3 bits (64), Expect = 8.4 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = -2 Query: 550 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHS------STTRAATVSFLRSLSKPRE 389 PP+R + GR S P R + SR + S S +R+ T S RS SK R Sbjct: 106 PPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165 Query: 388 ELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTK 290 R + SS+ SR SR+ + P++K Sbjct: 166 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPTSK 197
>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%) Frame = -1 Query: 569 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 393 + K + + GK R + + RT P P SH+ +++SS+R S ++ + Sbjct: 79 RRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138 Query: 392 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 297 R+ RE KG + +K D I Sbjct: 139 RKVRDKEKREKEKDKGKDKEAHTIKRGDCGNI 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,702,974 Number of Sequences: 219361 Number of extensions: 1707652 Number of successful extensions: 4289 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4271 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
