| Clone Name | rbags10p01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104192.1| Zea mays PCO077725 mRNA sequence Length = 1688 Score = 430 bits (217), Expect = e-117 Identities = 376/429 (87%) Strand = Plus / Minus Query: 238 tctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccagg 297 |||||||| ||| || ||||| |||| ||||||||||||||||||| | ||||||||||| Sbjct: 1335 tctctataactcagcaccgagttccagcatcaaggtgtggttcgagtcatcgcttccagg 1276 Query: 298 gccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccg 357 |||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||| Sbjct: 1275 gccgctgaactggatggggccagggctgatgtatctgttcttgatggcccactcatccct 1216 Query: 358 catcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcac 417 || ||| ||| | ||||| || || |||||||| || || |||||||||||||||||||| Sbjct: 1215 caacgatgcatatttcttgaaaggtgcagcatcgagttccaccatagccttcttgatcac 1156 Query: 418 tggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctcc 477 ||||||||||||||| |||||||||||||||||||||| | |||| ||| ||||| || Sbjct: 1155 tggcttgaacttgccgtgcctcctctcaacatccatcagtgatgtcaatgctgttccacc 1096 Query: 478 aacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 537 ||||||||||| ||| || ||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 1095 aacagtccattcttctactggagccgcaaggttgccaaccgacgaaataagtcctgtctt 1036 Query: 538 gccaaactggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaa 597 ||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1035 cccactttggagaagggcaccagcaccatagcctaatgcatagcaatagttagaatcaaa 976 Query: 598 attggtagggaggccgcaccttccttcatatccaaagaagtgagactggcctctgaaatg 657 ||| ||||| |||||||| |||||||| || |||||||| |||| || ||||||||||| Sbjct: 975 attagtaggaaggccgcatcttccttcgtacccaaagaaatgagcttgtcctctgaaatg 916 Query: 658 tgcagagta 666 ||||||||| Sbjct: 915 tgcagagta 907
>dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M14, full insert sequence Length = 1960 Score = 408 bits (206), Expect = e-111 Identities = 379/437 (86%) Strand = Plus / Minus Query: 237 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 296 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 1776 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 1717 Query: 297 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 356 |||| ||||||||||||||||| ||||||||||| ||||||||| || ||| ||||| | Sbjct: 1716 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 1657 Query: 357 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatca 416 ||| || |||||||||||||| || || | ||||| || ||||||||||||||||||| Sbjct: 1656 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagccttcttgatca 1597 Query: 417 ctggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctc 476 |||||||| |||| || ||||||||||||||||||||||||| |||| ||||||||| | Sbjct: 1596 ctggcttgtactttccgtgcctcctctcaacatccatcaacgatgtcaatgcagttccac 1537 Query: 477 caacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtct 536 |||| ||||||| ||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct: 1536 caacggtccattcttccacaggagcagcgaggttgccaaccgacgtaatcagtcctgtct 1477 Query: 537 tgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaa 596 | ||| | |||||||| || |||| ||| |||||||| |||||||||||| | ||||||| Sbjct: 1476 tcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatagttagaatcaa 1417 Query: 597 aattggtagggaggccgcaccttccttcatatccaaagaagtgagactggcctctgaaat 656 || | ||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 1416 aaatagtaggaaggccacatcttccttcatatccaaagaagtgagattggcctctgaaat 1357 Query: 657 gtgcagagtacttnccc 673 |||| | |||||| ||| Sbjct: 1356 gtgcggggtacttcccc 1340
>gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP) beta-subunit mRNA, complete cds Length = 1986 Score = 176 bits (89), Expect = 6e-41 Identities = 269/329 (81%) Strand = Plus / Minus Query: 311 atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 370 |||||||| ||| | ||||||||||| || | |||||||| |||| | | || ||||| Sbjct: 1676 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1617 Query: 371 ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 430 ||||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ttcttgaatggagcaccttcaagctcaaccatagccttcttgatcactggcttgaacttg 1557 Query: 431 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 490 ||||| |||||||| || |||||||||||||| ||||| ||||| || || ||| ||| | Sbjct: 1556 ccatgtctcctctctacgtccatcaacgcagtgagtgctgttccacctacggtcaattct 1497 Query: 491 tccacaggagcagccaggttaccaaccgacgagataagtcctgtcttgccaaactggaga 550 || ||||||||||||| ||||||||||| || || | |||||||| ||| || || Sbjct: 1496 tcaacaggagcagccaaattaccaaccgatgatatcaaccctgtcttcccactttgaagc 1437 Query: 551 agagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggtagggagg 610 || | || |||||||| || ||||| || || || | ||||||||||||| || | | Sbjct: 1436 agtgatcctgcaccataccccaatgcgtaacagtatgtagaatcaaaattggatggcaag 1377 Query: 611 ccgcaccttccttcatatccaaagaagtg 639 || |||||||||||||| ||||| ||||| Sbjct: 1376 ccacaccttccttcataaccaaaaaagtg 1348
>gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence Length = 1952 Score = 168 bits (85), Expect = 2e-38 Identities = 178/209 (85%) Strand = Plus / Minus Query: 311 atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 370 |||||||| ||| | ||||||||||| || | |||||||| |||| | | || ||||| Sbjct: 1715 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1656 Query: 371 ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 430 ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1655 ttcttgaatggagcacctccaagctcaaccatagccttcttgatcactggcttgaacttg 1596 Query: 431 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 490 ||||| |||||||| || |||||||| ||||| ||||| ||||| || || ||||||| | Sbjct: 1595 ccatgtctcctctctacgtccatcaatgcagtgagtgctgttccacctaccgtccattct 1536 Query: 491 tccacaggagcagccaggttaccaaccga 519 || ||||||||||||| ||||||||||| Sbjct: 1535 tcaacaggagcagccaaattaccaaccga 1507 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 590 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtgagactg 645 ||||||||||||| || | ||| |||||||||||||| ||||| ||||| ||||| Sbjct: 1436 gaatcaaaattggatggcaagccacaccttccttcataaccaaaaaagtgggactg 1381
>ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G04040 mRNA, complete cds Length = 1947 Score = 165 bits (83), Expect = 2e-37 Identities = 227/275 (82%) Strand = Plus / Minus Query: 365 gcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttg 424 ||||| |||||||| || ||| | ||||| ||||||||||| |||||||| || |||||| Sbjct: 1634 gcaaatttcttaaacggtgcaccttcaagttcaaccatagctttcttgataacaggcttg 1575 Query: 425 aacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtc 484 || || ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||| Sbjct: 1574 aatttaccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtc 1515 Query: 485 cattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtcttgccaaac 544 || | ||| ||||||||||||| ||| |||||||| || || | ||| ||||| || | Sbjct: 1514 cactcttcaacaggagcagccaagtttccaaccgatgaaattaatccggtctttccgctc 1455 Query: 545 tggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggta 604 |||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| ||| Sbjct: 1454 tggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgta 1395 Query: 605 gggaggccgcaccttccttcatatccaaagaagtg 639 || | |||||| ||||||||||| ||||||||||| Sbjct: 1394 ggtaagccgcatcttccttcatacccaaagaagtg 1360
>ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G12000 mRNA, complete cds Length = 2072 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 303 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 362 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691 Query: 363 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 422 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631 Query: 423 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 482 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571 Query: 483 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 537 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516
>gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000) mRNA, complete cds Length = 1733 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 303 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 362 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1642 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1583 Query: 363 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 422 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1582 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1523 Query: 423 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 482 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1522 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1463 Query: 483 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 537 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1462 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1408
>gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000; F12F1.13) mRNA, complete cds Length = 1965 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 303 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 362 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691 Query: 363 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 422 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631 Query: 423 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 482 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571 Query: 483 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 537 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516
>gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent phosphofructokinase beta subunit (PPi-PFKb) mRNA, complete cds Length = 2034 Score = 153 bits (77), Expect = 9e-34 Identities = 164/193 (84%) Strand = Plus / Minus Query: 314 ggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttc 373 ||||| || |||||||| || || |||| ||||| ||||| ||||| || |||||||| Sbjct: 1681 ggaccaggactgatgtagcgattattgagagcccactcatctcgcatggatacaaacttc 1622 Query: 374 ttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttgcca 433 || ||||| | | ||||||| || ||||| |||||||| ||||| ||||||||||||||| Sbjct: 1621 ttgaatggtgtaccatcaagttccaccatcgccttcttaatcacaggcttgaacttgcca 1562 Query: 434 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 493 || |||||||| |||||||| || ||||||||||||||||| | ||||||||||| |||| Sbjct: 1561 tgtctcctctctacatccattaatgcagtcagtgcagttccactaacagtccattcttcc 1502 Query: 494 acaggagcagcca 506 || |||||||||| Sbjct: 1501 actggagcagcca 1489
>dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C08, full insert sequence Length = 453 Score = 143 bits (72), Expect = 9e-31 Identities = 147/172 (85%) Strand = Plus / Minus Query: 237 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 296 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 172 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 113 Query: 297 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 356 |||| ||||||||||||||||| ||||||||||| ||||||||| || ||| ||||| | Sbjct: 112 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 53 Query: 357 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagcctt 408 ||| || |||||||||||||| || || | ||||| || ||||||||||| Sbjct: 52 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagcctt 1
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 434 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 493 ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||| Sbjct: 7660685 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 7660744 Query: 494 acaggagcagccaggttaccaacc 517 ||||||||||| ||||| |||||| Sbjct: 7660745 acaggagcagcgaggttgccaacc 7660768 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 237 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 296 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 7660088 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 7660147 Query: 297 ggccgctgaactggatgggacc 318 |||| ||||||||||||||||| Sbjct: 7660148 ggccactgaactggatgggacc 7660169 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 527 agtcctgtcttgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatag 586 ||||||||||| ||| | |||||||| || |||| ||| |||||||| |||||||||||| Sbjct: 7660940 agtcctgtcttcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatag 7660999 Query: 587 ctggaatcaaaattggtagggaggccgcaccttccttcatatc 629 | ||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 7661000 ttagaatcaaaaatagtaggaaggccacatcttccttcatatc 7661042 Score = 61.9 bits (31), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 624 catatccaaagaagtgagactggcctctgaaatgtgcagagtacttnccc 673 |||| |||||||||||||| ||||||||||||||||| | |||||| ||| Sbjct: 7661108 catacccaaagaagtgagattggcctctgaaatgtgcggggtacttcccc 7661157 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaactt 429 ||||| || ||||||||||||||||||||||||||| |||| Sbjct: 7660420 tcaagttccaccatagccttcttgatcactggcttgtactt 7660460 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 320 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 378 ||||||||||| ||||||||| || ||| ||||| |||| || |||||||||||||| Sbjct: 7660262 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 7660320
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 434 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 493 ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||| Sbjct: 83940 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 83999 Query: 494 acaggagcagccaggttaccaacc 517 ||||||||||| ||||| |||||| Sbjct: 84000 acaggagcagcgaggttgccaacc 84023 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 237 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 296 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 83343 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 83402 Query: 297 ggccgctgaactggatgggacc 318 |||| ||||||||||||||||| Sbjct: 83403 ggccactgaactggatgggacc 83424 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 527 agtcctgtcttgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatag 586 ||||||||||| ||| | |||||||| || |||| ||| |||||||| |||||||||||| Sbjct: 84195 agtcctgtcttcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatag 84254 Query: 587 ctggaatcaaaattggtagggaggccgcaccttccttcatatc 629 | ||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 84255 ttagaatcaaaaatagtaggaaggccacatcttccttcatatc 84297 Score = 61.9 bits (31), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 624 catatccaaagaagtgagactggcctctgaaatgtgcagagtacttnccc 673 |||| |||||||||||||| ||||||||||||||||| | |||||| ||| Sbjct: 84363 catacccaaagaagtgagattggcctctgaaatgtgcggggtacttcccc 84412 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaactt 429 ||||| || ||||||||||||||||||||||||||| |||| Sbjct: 83675 tcaagttccaccatagccttcttgatcactggcttgtactt 83715 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 320 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 378 ||||||||||| ||||||||| || ||| ||||| |||| || |||||||||||||| Sbjct: 83517 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 83575
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11 Length = 198022 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 431 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 490 ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | | Sbjct: 57126 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 57067 Query: 491 tccacaggagcagccaggttaccaacc 517 || ||||||||||||| ||| |||||| Sbjct: 57066 tcaacaggagcagccaagtttccaacc 57040 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaa 426 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 57247 tcaagttcaaccatagctttcttgataacaggcttgaa 57210 Score = 40.1 bits (20), Expect = 9.3 Identities = 68/84 (80%) Strand = Plus / Minus Query: 544 ctggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggt 603 ||||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| || Sbjct: 56924 ctggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgt 56865 Query: 604 agggaggccgcaccttccttcata 627 ||| | |||||| ||||||||||| Sbjct: 56864 aggtaagccgcatcttccttcata 56841
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 Length = 88848 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 431 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 490 ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | | Sbjct: 60309 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 60368 Query: 491 tccacaggagcagccaggttaccaacc 517 || ||||||||||||| ||| |||||| Sbjct: 60369 tcaacaggagcagccaagtttccaacc 60395 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaa 426 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 60188 tcaagttcaaccatagctttcttgataacaggcttgaa 60225 Score = 40.1 bits (20), Expect = 9.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 544 ctggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggt 603 ||||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| || Sbjct: 60511 ctggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgt 60570 Query: 604 agggaggccgcaccttccttcata 627 ||| | |||||| ||||||||||| Sbjct: 60571 aggtaagccgcatcttccttcata 60594
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 437 ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 496 |||||||| ||||||||||| || || || ||||| || || |||||||||| ||||||| Sbjct: 64016 ctcctctcgacatccatcaaggctgtgagagcagtcccacctacagtccattcttccaca 63957 Query: 497 ggagcagccaggttaccaacc 517 |||||||||| ||| |||||| Sbjct: 63956 ggagcagccaagttcccaacc 63936 Score = 44.1 bits (22), Expect = 0.60 Identities = 52/62 (83%) Strand = Plus / Minus Query: 320 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaat 379 |||||||||||||||||||| | |||||||| || |||| || || || ||||||||| Sbjct: 64301 gggctgatgtatcggttcttcaatgcccattcttcacgcagtgatgcgaatttcttaaat 64242 Query: 380 gg 381 || Sbjct: 64241 gg 64240 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaactt 429 ||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 64149 tcaagttccaccattgctttcttgatcacaggcttgaactt 64109
>emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent phosphofructokinase beta subunit Length = 5280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaactt 429 |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 4606 tcaagctccaccatcgccttcttgatcacaggcttgaactt 4566 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 437 ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 496 ||||| || |||||||| || | |||||||||||| || ||||| ||||||| | ||||| Sbjct: 4243 ctcctttctacatccattaaagaagtcagtgcagtgccaccaactgtccattctgccaca 4184 Query: 497 ggagca 502 |||||| Sbjct: 4183 ggagca 4178
>gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofructokinase-like gene, partial sequence Length = 428 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 320 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 378 |||||||||||||||||||| | ||||||||| || |||| || ||||| |||||||| Sbjct: 238 gggctgatgtatcggttcttcaaggcccattcctcgcgcagggatgcaaatttcttaaa 296
>ref|XM_648081.1| Entamoeba histolytica HM-1:IMSS pyrophosphate-dependent phosphofructokinase (91.t00031) partial mRNA Length = 1641 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 590 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtga 640 |||||||||||| | |||| | | || |||||||||||||||||||||||| Sbjct: 1295 gaatcaaaattgcttgggaaggcacatcttccttcatatccaaagaagtga 1245
>gb|AF013986.1|AF013986 Entamoeba histolytica PPi-dependent phosphofructokinase (ehpfk) mRNA, complete cds Length = 1696 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 590 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtga 640 |||||||||||| | |||| | | || |||||||||||||||||||||||| Sbjct: 1312 gaatcaaaattgcttgggaaggcacatcttccttcatatccaaagaagtga 1262
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence Length = 120811 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 389 tcaagctcaaccatagccttcttgatcactggcttgaa 426 |||||||| ||||| |||||||||||||| |||||||| Sbjct: 88087 tcaagctccaccattgccttcttgatcacaggcttgaa 88050 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 343 ggcccattcatcccgcatcgaggcaaactt 372 ||||||||||||||||| ||||||||||| Sbjct: 88243 ggcccattcatcccgcaatgaggcaaactt 88214
>gb|L77082.1|TOBCDC2 Nicotiana tabacum cdc2 mRNA, complete cds Length = 1379 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 15 aacaacttgaggggtggggtgggg 38 |||||||||||||||||||||||| Sbjct: 1159 aacaacttgaggggtggggtgggg 1136
>ref|XM_662709.1| Cryptosporidium hominis TU502 pyrophosphate-dependent phosphofructokinase (Chro.30172) partial mRNA Length = 3987 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 612 cgcaccttccttcatatccaaagaagtgag 641 |||| |||||||||||||||||| |||||| Sbjct: 1339 cgcatcttccttcatatccaaagtagtgag 1310
>ref|XM_626715.1| Cryptosporidium parvum Iowa II pyrophosphate-dependent 6-phosphofructokinase (cgd3_1400), partial mRNA Length = 3984 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 612 cgcaccttccttcatatccaaagaagtgag 641 |||| |||||||||||||||||| |||||| Sbjct: 1339 cgcatcttccttcatatccaaagtagtgag 1310
>ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding protein 1, interferon-inducible, 67kDa (predicted) (Gbp1_predicted), mRNA Length = 2343 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 aggaacaagaagaaaatttcaa 216 |||||||||||||||||||||| Sbjct: 2237 aggaacaagaagaaaatttcaa 2258
>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence Length = 111561 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 81258 acttaacccactccaactcaa 81238
>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence Length = 66066 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 acaggagcagccaggttacca 514 ||||||||||||||||||||| Sbjct: 32087 acaggagcagccaggttacca 32107
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 acaggagcagccaggttacca 514 ||||||||||||||||||||| Sbjct: 94700 acaggagcagccaggttacca 94720
>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence Length = 68256 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 acaggagcagccaggttacca 514 ||||||||||||||||||||| Sbjct: 8617 acaggagcagccaggttacca 8637
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 1298 acttaacccactccaactcaa 1318
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aggggtggggtgggggttgtt 44 ||||||||||||||||||||| Sbjct: 50656 aggggtggggtgggggttgtt 50636
>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence Length = 143015 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 57315 acttaacccactccaactcaa 57295
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 14778 acttaacccactccaactcaa 14758
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence Length = 110272 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 22528 acttaacccactccaactcaa 22548
>emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, the CD34 gene for CD34 antigen and the 3' end of the PLXNA2 gene for plexin A2, complete sequence Length = 198906 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgtt 44 ||||||||||||||||||||| Sbjct: 25393 aggggtggggtgggggttgtt 25413
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete sequence Length = 180545 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 catcgaggcaaacttcttaaa 378 ||||||||||||||||||||| Sbjct: 77544 catcgaggcaaacttcttaaa 77524
>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence Length = 242297 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ggggtggggtgggggttgtta 45 ||||||||||||||||||||| Sbjct: 187699 ggggtggggtgggggttgtta 187719
>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence Length = 115074 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 1985 acttaacccactccaactcaa 1965
>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence Length = 111786 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 45944 acttaacccactccaactcaa 45964
>gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete sequence Length = 125457 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 73213 acttaacccactccaactcaa 73233
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence Length = 107160 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acttaacccactccaactcaa 118 ||||||||||||||||||||| Sbjct: 75923 acttaacccactccaactcaa 75903
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 aaacttcttaaatggcgcagc 387 ||||||||||||||||||||| Sbjct: 101378 aaacttcttaaatggcgcagc 101358
>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182489 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgtt 44 ||||||||||||||||||||| Sbjct: 138353 aggggtggggtgggggttgtt 138373
>gb|AC156276.6| Mus musculus 10 BAC RP24-323L12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199119 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cttgaggggtggggtgggggt 40 ||||||||||||||||||||| Sbjct: 84059 cttgaggggtggggtgggggt 84039
>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence Length = 188353 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 atgcctcctctcaacatccat 453 ||||||||||||||||||||| Sbjct: 140490 atgcctcctctcaacatccat 140510
>gb|AC151278.2| Mus musculus BAC clone RP24-164I15 from chromosome 17, complete sequence Length = 175960 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtta 45 ||||||||||||||||||||| Sbjct: 72107 ggggtggggtgggggttgtta 72087
>emb|AJ617333.1| Pichia acaciae plasmid pPac1-2 ORF1, ORF2, ORF3 and ORF4 Length = 6785 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tgaggggtggggtgggggttg 42 ||||||||||||||||||||| Sbjct: 6738 tgaggggtggggtgggggttg 6758 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tgaggggtggggtgggggttg 42 ||||||||||||||||||||| Sbjct: 48 tgaggggtggggtgggggttg 28
>dbj|AP005626.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB51H10, complete sequence Length = 74057 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 645 ggcctctgaaatgtgcagagt 665 ||||||||||||||||||||| Sbjct: 50212 ggcctctgaaatgtgcagagt 50232
>emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3, complete sequence Length = 160771 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgtt 44 ||||||||||||||||||||| Sbjct: 23505 aggggtggggtgggggttgtt 23525
>gb|U02596.1|PAU02596 Pichia acaciae NRRL Y-18665 plasmid pPac1-2 killer toxin gene, complete cds Length = 1716 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tgaggggtggggtgggggttg 42 ||||||||||||||||||||| Sbjct: 48 tgaggggtggggtgggggttg 28
>gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosome 8, complete sequence Length = 233538 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttgaggggtggggtgggggt 40 |||||||||||||||||||| Sbjct: 97500 ttgaggggtggggtgggggt 97519
>gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosome 13, complete sequence Length = 150469 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 149671 ggggtggggtgggggttgtt 149652
>gb|DQ131890.1| Nicotiana tabacum cytochrome P450 monooxygenase 121A_A02 pseudogene mRNA, complete sequence Length = 1547 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 gcaccttccttcatatccaa 632 |||||||||||||||||||| Sbjct: 1474 gcaccttccttcatatccaa 1455
>gb|DQ131887.1| Nicotiana tabacum cytochrome P450 monooxygenase CYP82E2 mRNA, complete cds Length = 1757 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 gcaccttccttcatatccaa 632 |||||||||||||||||||| Sbjct: 1481 gcaccttccttcatatccaa 1462
>gb|DQ131885.1| Nicotiana tabacum cytochrome P450 monooxygenase CYP82E4v2 mRNA, complete cds Length = 1754 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 gcaccttccttcatatccaa 632 |||||||||||||||||||| Sbjct: 1481 gcaccttccttcatatccaa 1462
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tctcaaaactgcaaggaaca 201 |||||||||||||||||||| Sbjct: 10339 tctcaaaactgcaaggaaca 10320
>gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, complete sequence Length = 195433 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 acatcttattaaacattcca 137 |||||||||||||||||||| Sbjct: 31371 acatcttattaaacattcca 31390
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2) genes, complete cds Length = 328473 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 agcatcaagctcaaccatagcctt 408 ||||| |||||||||||||||||| Sbjct: 67034 agcatgaagctcaaccatagcctt 67057 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 385 agcatcaagctcaaccatagcctt 408 ||||| |||||||||||||||||| Sbjct: 47113 agcatgaagctcaaccatagcctt 47090
>ref|XM_595012.2| PREDICTED: Bos taurus similar to IGF-II mRNA-binding protein 1 (LOC516853), mRNA Length = 1304 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acaacttgaggggtggggtg 35 |||||||||||||||||||| Sbjct: 217 acaacttgaggggtggggtg 236
>gb|BC016509.1| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone MGC:17276 IMAGE:4180160), complete cds Length = 2514 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 2413 gaggggtggggtgggggttg 2394
>ref|XM_587285.2| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript variant 1 (LOC510173), mRNA Length = 2359 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 acttgaggggtggggtgggg 38 |||||||||||||||||||| Sbjct: 2221 acttgaggggtggggtgggg 2202
>ref|XM_882760.1| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript variant 2 (LOC510173), mRNA Length = 2267 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 acttgaggggtggggtgggg 38 |||||||||||||||||||| Sbjct: 2129 acttgaggggtggggtgggg 2110
>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence Length = 179510 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 127753 ggggtggggtgggggttgtt 127734
>gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181903 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 caacttgaggggtggggtgggggt 40 ||||||| |||||||||||||||| Sbjct: 171595 caacttggggggtggggtgggggt 171618
>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence Length = 209230 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 170956 ggggtggggtgggggttgtt 170975
>gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, complete sequence Length = 136964 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 acatcttattaaacattcca 137 |||||||||||||||||||| Sbjct: 40502 acatcttattaaacattcca 40521
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 163204 ggggtggggtgggggttgtt 163185
>gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosome 18, complete sequence Length = 219699 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgaggggtggggtgggggtt 41 |||||||||||||||||||| Sbjct: 114229 tgaggggtggggtgggggtt 114248
>emb|AJ270784.1|HHI270784 Hippoglossus hippoglossus microsatellite DNA, clone Hhi55 Length = 424 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 182 gaggggtggggtgggggttg 201
>gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome 6, complete sequence Length = 149502 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 108099 ggggtggggtgggggttgtt 108080
>gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170181 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttgaggggtggggtgggggt 40 |||||||||||||||||||| Sbjct: 27781 ttgaggggtggggtgggggt 27762
>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1 of 3 of the complete sequence Length = 106598 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cccactccaactcaacatct 123 |||||||||||||||||||| Sbjct: 97173 cccactccaactcaacatct 97154
>gb|BC007958.2| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone IMAGE:4301779), partial cds Length = 765 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 662 gaggggtggggtgggggttg 643
>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence Length = 129102 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 atgcctcctctcaacatcca 452 |||||||||||||||||||| Sbjct: 64505 atgcctcctctcaacatcca 64524
>emb|AL731551.9| Human DNA sequence from clone RP11-337F21 on chromosome 10 Contains part of the CUBN gene for cubilin (intrinsic factor-cobalamin receptor), complete sequence Length = 103188 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgt 43 |||||||||||||||||||| Sbjct: 37429 aggggtggggtgggggttgt 37448
>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the 5' end of the ITGBL1 gene for integrin, beta-like 1 (with EGF-like repeat domains), complete sequence Length = 149143 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cccactccaactcaacatct 123 |||||||||||||||||||| Sbjct: 13544 cccactccaactcaacatct 13525
>emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18 on chromosome 6p22.2-23 Contains the ID4 gene for dominant negative helix-loop-helix inhibitor of DNA binding 4 protein, a novel gene, the 5' end of two novel genes and four CpG islands, complete sequence Length = 185371 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aaaacaacttgaggggtggg 32 |||||||||||||||||||| Sbjct: 15559 aaaacaacttgaggggtggg 15578
>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA (LOC587342), partial mRNA Length = 1014 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 caaggaacaagaagaaaatt 212 |||||||||||||||||||| Sbjct: 607 caaggaacaagaagaaaatt 588
>emb|X87940.1|SADNAIF2 S.aurantiaca DNA for initiation factor 2 Length = 5186 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cttgaggggtggggtggggg 39 |||||||||||||||||||| Sbjct: 744 cttgaggggtggggtggggg 763
>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a novel gene, the Arht1 gene for ras homolog gene family member T1, the 5' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 153420 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgt 43 |||||||||||||||||||| Sbjct: 77185 aggggtggggtgggggttgt 77204
>emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 in linkage group 6, complete sequence Length = 218236 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 537 tgccaaactggagaagagcaccagcacc 564 |||||||||||||||| |||||| |||| Sbjct: 44660 tgccaaactggagaagggcaccatcacc 44633
>gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167137 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccactccaactcaacatctt 124 |||||||||||||||||||| Sbjct: 166676 ccactccaactcaacatctt 166657
>dbj|AK091166.1| Homo sapiens cDNA FLJ33847 fis, clone CTONG2005399, weakly similar to ZINC FINGER PROTEIN 195 Length = 2955 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 2875 gaggggtggggtgggggttg 2856
>dbj|AK074967.1| Homo sapiens cDNA FLJ90486 fis, clone NT2RP3003354, highly similar to Secretory carrier membrane protein 4 Length = 2500 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 2414 gaggggtggggtgggggttg 2395
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggggtgggggttgttaaatg 49 |||||||||||||||||||| Sbjct: 287303 ggggtgggggttgttaaatg 287322
>gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143721 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccactccaactcaacatctt 124 |||||||||||||||||||| Sbjct: 1544 ccactccaactcaacatctt 1525
>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence Length = 179884 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctcaaccatagccttcttga 413 |||||||||||||||||||| Sbjct: 167232 ctcaaccatagccttcttga 167213
>gb|BC016685.1|BC016685 Homo sapiens, clone IMAGE:4214718, mRNA Length = 906 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 774 gaggggtggggtgggggttg 755
>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence Length = 188389 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctcaaccatagccttcttga 413 |||||||||||||||||||| Sbjct: 29573 ctcaaccatagccttcttga 29554
>gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome 7, complete sequence Length = 216527 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 178824 ggggtggggtgggggttgtt 178805
>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete sequence Length = 150894 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 23593 ggggtggggtgggggttgtt 23612
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete sequence Length = 184201 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aggggtggggtgggggttgt 43 |||||||||||||||||||| Sbjct: 44440 aggggtggggtgggggttgt 44459
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 ggggtgggggttgttaaatgtgga 53 |||||||||||||||| ||||||| Sbjct: 7259819 ggggtgggggttgttagatgtgga 7259796
>gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, complete sequence Length = 166763 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ctgcaaggaacaagaagaaaattt 213 ||||||| |||||||||||||||| Sbjct: 52739 ctgcaagaaacaagaagaaaattt 52716
>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence Length = 160835 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ctgcaaggaacaagaagaaaattt 213 ||||||| |||||||||||||||| Sbjct: 9718 ctgcaagaaacaagaagaaaattt 9741
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 ggggtgggggttgttaaatgtgga 53 |||||||||||||||| ||||||| Sbjct: 100303 ggggtgggggttgttagatgtgga 100280
>emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52A6, complete sequence Length = 150951 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 19773 ggggtggggtgggggttgtt 19754
>ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 (ENSANGG00000007740), partial mRNA Length = 1257 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cttcttgatcactggcttga 425 |||||||||||||||||||| Sbjct: 1155 cttcttgatcactggcttga 1136
>gb|BC062598.1| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone MGC:70890 IMAGE:5247983), complete cds Length = 2585 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaggggtggggtgggggttg 42 |||||||||||||||||||| Sbjct: 2412 gaggggtggggtgggggttg 2393
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tctcaaaactgcaaggaaca 201 |||||||||||||||||||| Sbjct: 172201 tctcaaaactgcaaggaaca 172182
>dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-285B2, complete sequence Length = 167054 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ctgcaaggaacaagaagaaaattt 213 ||||||| |||||||||||||||| Sbjct: 97123 ctgcaagaaacaagaagaaaattt 97100
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 22835 ggggtggggtgggggttgtt 22816
>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete sequence Length = 199574 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 150340 ggggtggggtgggggttgtt 150321
>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence Length = 239994 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 186699 ggggtggggtgggggttgtt 186680
>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence Length = 208318 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 40549 ggggtggggtgggggttgtt 40568
>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence Length = 198860 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 52224 ggggtggggtgggggttgtt 52205
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggggtggggtgggggttgtt 44 |||||||||||||||||||| Sbjct: 171084 ggggtggggtgggggttgtt 171103
>emb|AL929226.7| Mouse DNA sequence from clone RP23-368N20 on chromosome X, complete sequence Length = 79248 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aaaatattgtcaaaacaact 21 |||||||||||||||||||| Sbjct: 41849 aaaatattgtcaaaacaact 41868
>dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 9/11 Length = 100000 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ctgcaaggaacaagaagaaaattt 213 ||||||| |||||||||||||||| Sbjct: 75474 ctgcaagaaacaagaagaaaattt 75451 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,169,264 Number of Sequences: 3902068 Number of extensions: 6169264 Number of successful extensions: 154635 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154286 Number of HSP's gapped (non-prelim): 348 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)