Clone Information

BLAST Search Result

Clone Name	rbags11d23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AB032840.1\| Hordeum vulgare HVA/68 mRNA for vacuolar proton-...	952	0.0
2	gb\|U36939.1\|HVU36939 Hordeum vulgare vacuolar ATPase catalytic s...	936	0.0
3	gb\|DQ432014.1\| Triticum aestivum vacuolar proton-ATPase subunit ...	533	e-148
4	dbj\|AK061925.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	153	8e-34
5	dbj\|AK069821.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	153	8e-34
6	dbj\|AK067063.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	121	3e-24
7	gb\|AY104754.1\| Zea mays PCO134411 mRNA sequence	96	2e-16
8	gb\|U36436.1\|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRN...	88	4e-14
9	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
10	dbj\|AP004744.2\| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
11	dbj\|AP005769.3\| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
12	gb\|BT024092.1\| Zea mays clone EL01N0551D01 mRNA sequence	80	1e-11
13	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
14	dbj\|AP003992.2\| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
15	dbj\|AB189964.1\| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATP...	50	0.009
16	gb\|AC097529.2\| Homo sapiens BAC clone RP11-669F3 from 4, complet...	44	0.55
17	emb\|AL589684.7\| Human DNA sequence from clone RP11-437J19 on chr...	42	2.2
18	emb\|BX927299.6\| Zebrafish DNA sequence from clone DKEY-146H10 in...	42	2.2
19	gb\|AF367445.1\| Prunus persica clone AtpvA1 V-ATPase catalytic su...	42	2.2
20	gb\|AC025177.6\| Homo sapiens chromosome 5 clone CTD-2131I18, comp...	42	2.2
21	emb\|AJ276326.1\|MCR276326 Mesembryanthemum crystallinum mRNA for ...	42	2.2
22	gb\|BC033597.1\| Mus musculus AP2 associated kinase 1, mRNA (cDNA ...	40	8.5
23	gb\|AC159381.10\| Mus musculus 6 BAC RP24-460E4 (Roswell Park Canc...	40	8.5
24	gb\|AC101982.9\| Mus musculus chromosome 3, clone RP24-346F13, com...	40	8.5
25	gb\|AC166813.4\| Mus musculus chromosome 3, clone RP23-404H11, com...	40	8.5
26	gb\|AC147771.1\| Homo sapiens chromosome 16 clone PCR-16A03, compl...	40	8.5
27	ref\|XM_449546.1\| Candida glabrata CBS138 hypothetical protein (C...	40	8.5
28	gb\|AC122199.4\| Mus musculus BAC clone RP23-57C9 from chromosome ...	40	8.5
29	gb\|AC107770.10\| Mus musculus chromosome 5, clone RP23-114M24, co...	40	8.5
30	gb\|AC090042.2\| Homo sapiens chromosome 3 clone RP11-21B12 map 3p...	40	8.5
31	gb\|AF098501.2\| Caenorhabditis elegans fosmid H28G03, complete se...	40	8.5
32	emb\|X07160.1\|GMHSP185 Soybean gene for heat shock protein Gmhsp1...	40	8.5
33	emb\|CR380959.1\| Candida glabrata strain CBS138 chromosome M comp...	40	8.5
34	dbj\|AP007161.1\| Aspergillus oryzae RIB40 genomic DNA, SC012	40	8.5
35	emb\|CR391627.1\| Gallus gallus finished cDNA, clone ChEST893o3	40	8.5
36	ref\|NM_171682.1\| Caenorhabditis elegans H28G03.1b (H28G03.1) mRN...	40	8.5
37	ref\|NM_171950.3\| Caenorhabditis elegans H28G03.1c (H28G03.1) mRN...	40	8.5
38	ref\|NM_171681.2\| Caenorhabditis elegans H28G03.1a (H28G03.1) mRN...	40	8.5
39	gb\|AC159712.7\| Mus musculus BAC RP23-236J3 (Roswell Park Cancer...	40	8.5
40	dbj\|AB189963.1\| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATP...	40	8.5
41	gb\|AC013427.3\|T1K7 Sequence of BAC T1K7 from Arabidopsis thalian...	40	8.5
42	gb\|AC158657.2\| Mus musculus 6 BAC RP23-395C12 (Roswell Park Canc...	40	8.5
43	gb\|AC006963.4\|AC006963 Homo sapiens PAC clone RP1-278D1 from X, ...	40	8.5
44	gb\|AC170088.9\| Mus musculus BAC RP23-94A1 (Roswell Park Cancer ...	40	8.5
45	emb\|AL606824.13\| Mouse DNA sequence from clone RP23-9G13 on chro...	40	8.5

>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds
          Length = 2281

 Score =  952 bits (480), Expect = 0.0
 Identities = 515/527 (97%), Gaps = 2/527 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tagacattattgatgttna-gtagatggacatcgtgcttattcn-ctatgaacatgtcca 58
            ||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||
Sbjct: 2241 tagacattattgatgttcaagtagatggacatcgtgcttattccactatgaacatgtcca 2182

                                                                        
Query: 59   ccggtgttcaatcttcttacaacaaataatggtacacatggggaaaaataatggcttgca 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 ccggtgttcaatcttcttacaacaaataatggtacacatggggaaaaataatggcttgca 2122

                                                                        
Query: 119  tcctggcgctggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcg 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 tcctggcgctggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcg 2062

                                                                        
Query: 179  cnnnnnnnggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagc 238
            |       ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 caaaaaaaggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagc 2002

                                                                        
Query: 239  aaattgctcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccata 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 aaattgctcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccata 1942

                                                                        
Query: 299  cacaacgtttcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggta 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 cacaacgtttcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggta 1882

                                                                        
Query: 359  aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1881 aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 1822

                                                                        
Query: 419  tcgaacttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 tcgaacttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcg 1762

                                                           
Query: 479  taggttatcttgtgtccatcagcattagctgctcgctccacagcctg 525
            |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1761 taggttatcttgtgtccatcagcattggctgctcgctccacagcctg 1715

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>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds
          Length = 2089

 Score =  936 bits (472), Expect = 0.0
 Identities = 513/527 (97%), Gaps = 2/527 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tagacattattgatgttna-gtagatggacatcgtgcttattcn-ctatgaacatgtcca 58
            ||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||
Sbjct: 2064 tagacattattgatgttcaagtagatggacatcgtgcttattccactatgaacatgtcca 2005

                                                                        
Query: 59   ccggtgttcaatcttcttacaacaaataatggtacacatggggaaaaataatggcttgca 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 ccggtgttcaatcttcttacaacaaataatggtacacatggggaaaaataatggcttgca 1945

                                                                        
Query: 119  tcctggcgctggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcg 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 tcctggcgctggagaccaaataatgtaaaatcctgaaaaaacaaggctgtctgtctgtcg 1885

                                                                        
Query: 179  cnnnnnnnggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaagc 238
            |       ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1884 caaaaaaaggggatcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaagc 1825

                                                                        
Query: 239  aaattgctcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccata 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 aaattgctcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccata 1765

                                                                        
Query: 299  cacaacgtttcttctttcttttacctagcctcgtcttctaggttgcggaacccggcggta 358
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1764 cacaacgtttcttctttcttttacctagcctcgtcttctaggttgcggaacccggctgta 1705

                                                                        
Query: 359  aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 1645

                                                                        
Query: 419  tcgaacttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 tcgaacttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcg 1585

                                                           
Query: 479  taggttatcttgtgtccatcagcattagctgctcgctccacagcctg 525
            |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1584 taggttatcttgtgtccatcagcattggctgctcgctccacagcctg 1538

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>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds
          Length = 2358

 Score =  533 bits (269), Expect = e-148
 Identities = 326/343 (95%), Gaps = 4/343 (1%)
 Strand = Plus / Minus

                                                                        
Query: 187  ggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcaaaa-gcaaattgc 245
            |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2112 gggggtcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaaagcaaattgc 2053

                                                                        
Query: 246  tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacg 305
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2052 tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaatg 1993

                                                                        
Query: 306  tttcttctttc---ttttacctagcctcgtcttctaggttgcggaacccggcggtaaggt 362
            |||||||| ||   ||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1992 tttcttctctccttttttacctagcctcgtcttctaggttgcggaacccggtggtgaggt 1933

                                                                        
Query: 363  cgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcga 422
            ||||||| |||||||||||||| ||||  |||||||||||||||||||||||||||||||
Sbjct: 1932 cgtcgtacaacttctggaattttgcgattaggacgtcttcgccttctgcggggtcttcga 1873

                                                                        
Query: 423  acttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtagg 482
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1872 acttttgggatacaaggcggtaaaatagatcgcccatgcgactctttacgacggcgtagg 1813

                                                       
Query: 483  ttatcttgtgtccatcagcattagctgctcgctccacagcctg 525
            |||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1812 ttatcttgtgtccatcagcattggctgctcgctccacggcctg 1770



 Score =  200 bits (101), Expect = 4e-48
 Identities = 170/187 (90%), Gaps = 10/187 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    tagacattattgatgttna-gtagatggacatcgtgcttattcn--ctatgaacatgtcc 57
            ||||||||||||||||| | |||||||||||||||||||||||   ||||||||||||||
Sbjct: 2320 tagacattattgatgttcaagtagatggacatcgtgcttattcctcctatgaacatgtcc 2261

                                                                        
Query: 58   accggtgttcaatcttctta--caacaaataatggtacacatggggaaaaa-taatggct 114
            ||||||| ||| ||||||||  |||||||||||||||||||||| |||||| ||||||| 
Sbjct: 2260 accggtgctcagtcttcttatacaacaaataatggtacacatggtgaaaaaataatggcg 2201

                                                                        
Query: 115  tgcatcctggcgctggagaccaaataatgt-aaaatcct---gaaaaaacaaggctgtct 170
            |||||||||||||||||||||||| ||||| ||||||||   ||||||||||||||||||
Sbjct: 2200 tgcatcctggcgctggagaccaaacaatgtaaaaatcctggggaaaaaacaaggctgtct 2141

                   
Query: 171  gtctgtc 177
            |||||||
Sbjct: 2140 gtctgtc 2134

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>dbj|AK061925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C02, full
           insert sequence
          Length = 1001

 Score =  153 bits (77), Expect = 8e-34
 Identities = 173/205 (84%)
 Strand = Plus / Minus

                                                                       
Query: 321 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 380
           ||||||| || ||||||||||||||||| ||||  || ||||| || || || |||||||
Sbjct: 710 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 651

                                                                       
Query: 381 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 440
           |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| ||||
Sbjct: 650 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 591

                                                                       
Query: 441 ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 500
           | ||||||||||||||||| |||  ||||| |||   ||| ||||| || ||||||||||
Sbjct: 590 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 531

                                    
Query: 501 cattagctgctcgctccacagcctg 525
           |||||||||| ||||||||||||||
Sbjct: 530 cattagctgcacgctccacagcctg 506



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  agtagatggacatcgtgcttattc 42
           ||||||||| ||||||||||||||
Sbjct: 993 agtagatggtcatcgtgcttattc 970

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>dbj|AK069821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L13, full
            insert sequence
          Length = 2315

 Score =  153 bits (77), Expect = 8e-34
 Identities = 173/205 (84%)
 Strand = Plus / Minus

                                                                        
Query: 321  acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 380
            ||||||| || ||||||||||||||||| ||||  || ||||| || || || |||||||
Sbjct: 2009 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 1950

                                                                        
Query: 381  atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 440
            |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| ||||
Sbjct: 1949 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 1890

                                                                        
Query: 441  ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 500
            | ||||||||||||||||| |||  ||||| |||   ||| ||||| || ||||||||||
Sbjct: 1889 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 1830

                                     
Query: 501  cattagctgctcgctccacagcctg 525
            |||||||||| ||||||||||||||
Sbjct: 1829 cattagctgcacgctccacagcctg 1805



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 19   agtagatggacatcgtgcttattc 42
            ||||||||| ||||||||||||||
Sbjct: 2292 agtagatggtcatcgtgcttattc 2269

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>dbj|AK067063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J10, full
            insert sequence
          Length = 2295

 Score =  121 bits (61), Expect = 3e-24
 Identities = 163/197 (82%)
 Strand = Plus / Minus

                                                                        
Query: 329  tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgcg 388
            ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| 
Sbjct: 1955 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgca 1896

                                                                        
Query: 389  acaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaat 448
            |  |  || |||| ||| |||||||| || ||||| ||||| || || |||||||| |||
Sbjct: 1895 atcaaaacttctttgccctctgcgggatcctcgaatttttgcgacactaggcggtagaat 1836

                                                                        
Query: 449  agatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcattagct 508
            ||||| |||||||||  ||||| |||   ||| || ||||| ||||||||||||  ||||
Sbjct: 1835 agatcgcccatgcgatgctttatgacactgtatgtaatcttctgtccatcagcaccagct 1776

                             
Query: 509  gctcgctccacagcctg 525
            || |||||||| |||||
Sbjct: 1775 gcccgctccaccgcctg 1759

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>gb|AY104754.1| Zea mays PCO134411 mRNA sequence
          Length = 2254

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 162/200 (81%)
 Strand = Plus / Minus

                                                                        
Query: 326  gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 385
            ||||| |||||||||||||||||||| | ||||||||||||||| |  ||||  || || 
Sbjct: 1956 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1897

                                                                        
Query: 386  gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 445
             |||| |   | |||||||||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 1896 ccgaccaaagcttcttcgccttctgcaggatcctcgaacttttgggatactaggcgataa 1837

                                                                        
Query: 446  aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 505
            |||||||| ||||  |||  ||||| |||   ||| |||||||| || || |||| |  |
Sbjct: 1836 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1777

                                
Query: 506  gctgctcgctccacagcctg 525
            ||||| ||||||||||||||
Sbjct: 1776 gctgcccgctccacagcctg 1757

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>gb|U36436.1|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRNA, partial cds
          Length = 2000

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 326  gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 385
            ||||| |||||||||||||||||||| | ||||||||||||||| |  ||||  || || 
Sbjct: 1679 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1620

                                                                        
Query: 386  gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 445
             |||| |   | ||||| |||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 1619 ccgaccaaagcttcttcaccttctgcaggatcctcgaacttttgggatactaggcgataa 1560

                                                                        
Query: 446  aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 505
            |||||||| ||||  |||  ||||| |||   ||| |||||||| || || |||| |  |
Sbjct: 1559 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1500

                                
Query: 506  gctgctcgctccacagcctg 525
            ||||| ||||||||||||||
Sbjct: 1499 gctgcccgctccacagcctg 1480

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                            
Query: 437      aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 496
                ||||| ||||||||||||||||| |||  ||||| |||   ||| ||||| || ||||||
Sbjct: 26903185 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 26903244

                                                      
Query: 497      tcagcattagctgctcgctccacagcctgcaaaacaag 534
                |||||||||||||| ||||||||||||| ||| |||||
Sbjct: 26903245 tcagcattagctgcacgctccacagcctacaagacaag 26903282



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                            
Query: 321      acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 380
                ||||||| || ||||||||||||||||| ||||  || ||||| || || || |||||||
Sbjct: 26902973 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26903032

                                                                 
Query: 381      atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 429
                |||| ||||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct: 26903033 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26903081



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 19       agtagatggacatcgtgcttattc 42
                ||||||||| ||||||||||||||
Sbjct: 26902690 agtagatggtcatcgtgcttattc 26902713

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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0065C04
          Length = 165270

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                         
Query: 437   aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 496
             ||||| ||||||||||||||||| |||  ||||| |||   ||| ||||| || ||||||
Sbjct: 26946 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 27005

                                                   
Query: 497   tcagcattagctgctcgctccacagcctgcaaaacaag 534
             |||||||||||||| ||||||||||||| ||| |||||
Sbjct: 27006 tcagcattagctgcacgctccacagcctacaagacaag 27043



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                         
Query: 321   acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 380
             ||||||| || ||||||||||||||||| ||||  || ||||| || || || |||||||
Sbjct: 26734 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26793

                                                              
Query: 381   atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 429
             |||| ||||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct: 26794 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26842



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    agtagatggacatcgtgcttattc 42
             ||||||||| ||||||||||||||
Sbjct: 26451 agtagatggtcatcgtgcttattc 26474

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>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0051O02
          Length = 169532

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                          
Query: 437    aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 496
              ||||| ||||||||||||||||| |||  ||||| |||   ||| ||||| || ||||||
Sbjct: 157811 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 157870

                                                    
Query: 497    tcagcattagctgctcgctccacagcctgcaaaacaag 534
              |||||||||||||| ||||||||||||| ||| |||||
Sbjct: 157871 tcagcattagctgcacgctccacagcctacaagacaag 157908



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                          
Query: 321    acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 380
              ||||||| || ||||||||||||||||| ||||  || ||||| || || || |||||||
Sbjct: 157599 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 157658

                                                               
Query: 381    atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 429
              |||| ||||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct: 157659 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 157707



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     agtagatggacatcgtgcttattc 42
              ||||||||| ||||||||||||||
Sbjct: 157316 agtagatggtcatcgtgcttattc 157339

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>gb|BT024092.1| Zea mays clone EL01N0551D01 mRNA sequence
          Length = 2273

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 160/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 326  gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 385
            ||||| |||||||||||||||||||| | |||||||||||| || |  ||||  || || 
Sbjct: 1967 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcatacagtttcttaaacttg 1908

                                                                        
Query: 386  gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 445
             |||| |   | |||||||||||||| || || || |||||||||||||| ||||| |||
Sbjct: 1907 ccgaccaaagcttcttcgccttctgcaggatcctcaaacttttgggatactaggcgataa 1848

                                                                        
Query: 446  aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 505
            |||||||| ||||  |||  ||||| |||   ||| |||||||| || || |||| |  |
Sbjct: 1847 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1788

                                
Query: 506  gctgctcgctccacagcctg 525
            ||||| ||||||||||||||
Sbjct: 1787 gctgcccgctccacagcctg 1768

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                          
Query: 329     tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 387
               ||||||||||| ||||||||||||||||||||||| ||||| | |||||| ||||||||
Sbjct: 4127190 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 4127132



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 80/97 (82%)
 Strand = Plus / Minus

                                                                           
Query: 437     aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 496
               |||||||| |||||||| |||||||||  ||||| |||   ||| || ||||| ||||||
Sbjct: 4126997 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 4126938

                                                    
Query: 497     tcagcattagctgctcgctccacagcctgcaaaacaa 533
               ||||||  |||||| |||||||| ||||  |||||||
Sbjct: 4126937 tcagcaccagctgcccgctccaccgcctataaaacaa 4126901

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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 329   tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 387
             ||||||||||| ||||||||||||||||||||||| ||||| | |||||| ||||||||
Sbjct: 37204 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 37146



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 80/97 (82%)
 Strand = Plus / Minus

                                                                         
Query: 437   aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 496
             |||||||| |||||||| |||||||||  ||||| |||   ||| || ||||| ||||||
Sbjct: 37011 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 36952

                                                  
Query: 497   tcagcattagctgctcgctccacagcctgcaaaacaa 533
             ||||||  |||||| |||||||| ||||  |||||||
Sbjct: 36951 tcagcaccagctgcccgctccaccgcctataaaacaa 36915

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>dbj|AB189964.1| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATPase catalytic
            subunit, complete cds
          Length = 2322

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 457
            ||||| |||||||| || || || ||||||||||| || ||||||||||| ||||| |||
Sbjct: 1947 tcttccccttctgccggatcctcaaacttttgggacactaggcggtaaaagagatctccc 1888

             
Query: 458  a 458
            |
Sbjct: 1887 a 1887

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>gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complete sequence
          Length = 54264

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 138   ataatgtaaaatcctgaaaaaa 159
             ||||||||||||||||||||||
Sbjct: 28728 ataatgtaaaatcctgaaaaaa 28707

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>emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 94555

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 80    acaaataatggtacacatggggaaaaataatgg 112
             ||||||||||||| |||||| ||||||||||||
Sbjct: 50582 acaaataatggta-acatggagaaaaataatgg 50613

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>emb|BX927299.6| Zebrafish DNA sequence from clone DKEY-146H10 in linkage group 19,
             complete sequence
          Length = 70460

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 556   aagcaaacttttacatgtttg 576
             |||||||||||||||||||||
Sbjct: 14614 aagcaaacttttacatgtttg 14594

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>gb|AF367445.1| Prunus persica clone AtpvA1 V-ATPase catalytic subunit A (atpvA1)
            mRNA, complete cds
          Length = 2336

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 457
            ||||| |||||||| || || || || ||||| || |||||||||||||| ||||| |||
Sbjct: 1929 tcttccccttctgccggatcctcaaatttttgtgacacaaggcggtaaaagagatctccc 1870

             
Query: 458  a 458
            |
Sbjct: 1869 a 1869

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>gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, complete sequence
          Length = 112967

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 508   tgctcgctccacagcctgcaaaaca 532
             ||||| |||||||||||||||||||
Sbjct: 88395 tgctccctccacagcctgcaaaaca 88419

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>emb|AJ276326.1|MCR276326 Mesembryanthemum crystallinum mRNA for putative vacuolar ATP synthase
            subunit A (vatA gene)
          Length = 2396

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 365  tcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaac 424
            ||||| |||||||||||||| ||||| ||   |||||| ||||| || ||||| ||||| 
Sbjct: 1980 tcgtacaacttctggaattttgcgacgagagtgtcttctccttcagcagggtcctcgaat 1921

                 
Query: 425  ttttg 429
            |||||
Sbjct: 1920 ttttg 1916

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>gb|BC033597.1| Mus musculus AP2 associated kinase 1, mRNA (cDNA clone
            IMAGE:5368140), with apparent retained intron
          Length = 4409

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 543  tattaagattaagaagcaaa 562
            ||||||||||||||||||||
Sbjct: 2141 tattaagattaagaagcaaa 2122

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>gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211463

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gcaaaacaagcatacacata 544
              ||||||||||||||||||||
Sbjct: 134534 gcaaaacaagcatacacata 134515

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>gb|AC101982.9| Mus musculus chromosome 3, clone RP24-346F13, complete sequence
          Length = 162227

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    tgcatatttcctttatgatg 594
              ||||||||||||||||||||
Sbjct: 124008 tgcatatttcctttatgatg 123989

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>gb|AC166813.4| Mus musculus chromosome 3, clone RP23-404H11, complete sequence
          Length = 193254

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    tgcatatttcctttatgatg 594
              ||||||||||||||||||||
Sbjct: 136756 tgcatatttcctttatgatg 136775

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>gb|AC147771.1| Homo sapiens chromosome 16 clone PCR-16A03, complete sequence
          Length = 8715

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   aacaaataatggtacacatg 98
            ||||||||||||||||||||
Sbjct: 4345 aacaaataatggtacacatg 4326

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>ref|XM_449546.1| Candida glabrata CBS138 hypothetical protein (CAGL0M04565g) partial
            mRNA
          Length = 2313

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 578  atatttcctttatgatgatg 597
            ||||||||||||||||||||
Sbjct: 1923 atatttcctttatgatgatg 1942

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>gb|AC122199.4| Mus musculus BAC clone RP23-57C9 from chromosome 8, complete sequence
          Length = 202975

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gcaaaacaagcatacacata 544
              ||||||||||||||||||||
Sbjct: 129343 gcaaaacaagcatacacata 129324

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>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence
          Length = 191762

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     acatggggaaaaataatggc 113
              ||||||||||||||||||||
Sbjct: 108085 acatggggaaaaataatggc 108066

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>gb|AC090042.2| Homo sapiens chromosome 3 clone RP11-21B12 map 3p, complete sequence
          Length = 167559

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ggtacacatggggaaaaata 108
              ||||||||||||||||||||
Sbjct: 135620 ggtacacatggggaaaaata 135601

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>gb|AF098501.2| Caenorhabditis elegans fosmid H28G03, complete sequence
          Length = 44352

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gcttgcatcctggcgctgga 131
             ||||||||||||||||||||
Sbjct: 18371 gcttgcatcctggcgctgga 18352

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>emb|X07160.1|GMHSP185 Soybean gene for heat shock protein Gmhsp18.5-C (class I)
          Length = 1833

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 221  ctctggtgaagcaaaagcaaattg 244
            ||||||| ||||||||||||||||
Sbjct: 1377 ctctggttaagcaaaagcaaattg 1400

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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 578    atatttcctttatgatgatg 597
              ||||||||||||||||||||
Sbjct: 500008 atatttcctttatgatgatg 499989

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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 509     gctcgctccacagcctgcaa 528
               ||||||||||||||||||||
Sbjct: 2404449 gctcgctccacagcctgcaa 2404430

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>emb|CR391627.1| Gallus gallus finished cDNA, clone ChEST893o3
          Length = 1074

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 aaaacaaggctgtctgtctg 175
           ||||||||||||||||||||
Sbjct: 747 aaaacaaggctgtctgtctg 728

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>ref|NM_171682.1| Caenorhabditis elegans H28G03.1b (H28G03.1) mRNA, complete cds
          Length = 948

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gcttgcatcctggcgctgga 131
           ||||||||||||||||||||
Sbjct: 445 gcttgcatcctggcgctgga 426

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>ref|NM_171950.3| Caenorhabditis elegans H28G03.1c (H28G03.1) mRNA, complete cds
          Length = 2116

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gcttgcatcctggcgctgga 131
           ||||||||||||||||||||
Sbjct: 534 gcttgcatcctggcgctgga 515

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>ref|NM_171681.2| Caenorhabditis elegans H28G03.1a (H28G03.1) mRNA, complete cds
          Length = 1046

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gcttgcatcctggcgctgga 131
           ||||||||||||||||||||
Sbjct: 543 gcttgcatcctggcgctgga 524

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>gb|AC159712.7| Mus musculus  BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221910

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 543    tattaagattaagaagcaaa 562
              ||||||||||||||||||||
Sbjct: 140473 tattaagattaagaagcaaa 140454

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>dbj|AB189963.1| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATPase catalytic
            subunit, complete cds
          Length = 2236

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 80/100 (80%)
 Strand = Plus / Minus

                                                                        
Query: 359  aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 418
            ||||| ||||||| |||||  ||||| || |||||  | ||||| ||||| || || || 
Sbjct: 1901 aggtcctcgtatagcttcttaaattttgccacaagagcttcttccccttcagccggatcc 1842

                                                    
Query: 419  tcgaacttttgggatacaaggcggtaaaatagatcaccca 458
            || |||||||| || || ||||||||||| ||||| ||||
Sbjct: 1841 tcaaacttttgagacactaggcggtaaaagagatctccca 1802

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>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 89473

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 518   acagcctgcaaaacaagcatacacatat 545
             ||||||||||||||||  ||||||||||
Sbjct: 47457 acagcctgcaaaacaaaaatacacatat 47484

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>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202215

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 543    tattaagattaagaagcaaa 562
              ||||||||||||||||||||
Sbjct: 201435 tattaagattaagaagcaaa 201454

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>gb|AC006963.4|AC006963 Homo sapiens PAC clone RP1-278D1 from X, complete sequence
          Length = 88215

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   taagaagcaaacttttacat 571
             ||||||||||||||||||||
Sbjct: 43764 taagaagcaaacttttacat 43783

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>gb|AC170088.9| Mus musculus  BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 253441

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   gcaaaacaagcatacacata 544
             ||||||||||||||||||||
Sbjct: 16665 gcaaaacaagcatacacata 16646

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>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete
              sequence
          Length = 247743

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gcaaaacaagcatacacata 544
              ||||||||||||||||||||
Sbjct: 137606 gcaaaacaagcatacacata 137587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,277,316
Number of Sequences: 3902068
Number of extensions: 6277316
Number of successful extensions: 136048
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 135829
Number of HSP's gapped (non-prelim): 203
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result