| Clone Name | rbags11d21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 Score = 1178 bits (594), Expect = 0.0 Identities = 613/618 (99%), Gaps = 1/618 (0%) Strand = Plus / Minus Query: 8 aagcaaatgtaacatggtagataggagaattattccagagaattacataggataacaaaa 67 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 769 aagcaaatgtaacatggtagatatgagaattattccagagaattacataggataactaaa 710 Query: 68 gtcacttgatctattcgattttgacaactagactcctttgtttgaccatggtaatagaat 127 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 709 gtcacttgatctattcgattttgacaaccagactcctttgtttgaccatggtaatagaat 650 Query: 128 gttcatgtctcattgcgtctgccctacaagagtaagttcccc-atacatagtcctattcg 186 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 649 gttcatgtctcattgcgtctgccctacaagagtaagttcccctatacatagtcctattcg 590 Query: 187 atttggtaactgggcgaacttgctgcgccgagctgcctacagatcactatcagcgacatc 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 atttggtaactgggcgaacttgctgcgccgagctgcctacagatcactatcagcgacatc 530 Query: 247 ctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatgag 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 ctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatgag 470 Query: 307 agttgctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagg 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 agttgctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagg 410 Query: 367 gatcttcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatccttt 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gatcttcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatccttt 350 Query: 427 gatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaatc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaatc 290 Query: 487 aaaaactgttccatcggtaagtgttccacggtagtgaactttaactctgtctcctttgtg 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 aaaaactgttccatcggtaagtgttccacggtagtgaactttaactctgtctcctttgtg 230 Query: 547 agccgagatgctgcacgattctggcttgtacttgacgccgatctggagcgccgacacgtc 606 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 229 agccgagatgctgcacgattctggcttgtacttgacgccgatctggagtgccgacacgtc 170 Query: 607 gccggacttcttggcgga 624 |||||||||||||||||| Sbjct: 169 gccggacttcttggcgga 152
>dbj|AK063115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D12, full insert sequence Length = 683 Score = 404 bits (204), Expect = e-109 Identities = 336/380 (88%) Strand = Plus / Minus Query: 245 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 304 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 485 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 426 Query: 305 agagttgctccgcctggaatggtaggtggtgatccctgatccccgtagccgagctttgaa 364 ||||| ||||| || || ||||| || ||||| || ||| | || || |||||||||||| Sbjct: 425 agagtcgctccaccagggatggtcggcggtgacccttgagcaccataaccgagctttgaa 366 Query: 365 gggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcct 424 ||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| ||| Sbjct: 365 gggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccctgatcccaccct 306 Query: 425 ttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagctagaa 484 ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 305 ttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagctagaa 246 Query: 485 tcaaaaactgttccatcggtaagtgttccacggtagtgaactttaactctgtctcctttg 544 |||||| |||||||||| |||||| |||||||||||||||||||||||||||| |||||| Sbjct: 245 tcaaaatctgttccatcagtaagttttccacggtagtgaactttaactctgtcgcctttg 186 Query: 545 tgagccgagatgctgcacgattctggcttgtacttgacgccgatctggagcgccgacacg 604 ||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 185 tgagcttgaatgctgcaggattctggcttgtgcttgacgccgatctggagctccgtcacg 126 Query: 605 tcgccggacttcttggcgga 624 |||||||| ||||||||||| Sbjct: 125 tcgccggatttcttggcgga 106
>gb|AY105607.1| Zea mays PCO107138 mRNA sequence Length = 808 Score = 353 bits (178), Expect = 4e-94 Identities = 307/350 (87%) Strand = Plus / Minus Query: 272 ccattgactgcgacaagctctgtgtcgaatatgagagttgctccgcctggaatggtaggt 331 |||||||| ||||||||||| ||||| |||||||| |||||||| || ||||| |||||| Sbjct: 508 ccattgacagcgacaagctccgtgtcaaatatgagggttgctccaccaggaatagtaggt 449 Query: 332 ggtgatccctgatccccgtagccgagctttgaagggatcttcagcttcctcttctcacca 391 || || || ||| ||| ||||| |||||||| |||||||||| ||||| ||| |||||| Sbjct: 448 ggcgagccttgaggcccatagccaagctttgatgggatcttcaacttccgcttttcacca 389 Query: 392 atgcacatgcccaaaattccctgatcccatcctttgatcacttgaccagtgcccaattca 451 | |||||| |||| | |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 388 acgcacattcccaggagaccctgatcccatcctttgatcacttgtccagtgcccaattca 329 Query: 452 aattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgtt 511 |||||||| |||||||| ||||||||||| ||||||||||| |||||||| |||||| || Sbjct: 328 aattcaatcgggtcacctctttcatagcttgaatcaaaaaccgttccatcagtaagtttt 269 Query: 512 ccacggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctggc 571 |||||||||||||||||||| |||| ||||||||||| |||||||| ||||| ||| Sbjct: 268 ccacggtagtgaactttaaccttgtcacctttgtgagcttgaatgctgcatgattccggc 209 Query: 572 ttgtacttgacgccgatctggagcgccgacacgtcgccggacttcttggc 621 |||||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 208 ttgtacttgacgccgatctggagctccgacacgtccccggatttcttggc 159
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 422 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 481 |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 54865 cctttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagcta 54924 Query: 482 gaatcaaaaactgttccatcggtaagtgttcc 513 ||||||||| |||||||||| |||||| |||| Sbjct: 54925 gaatcaaaatctgttccatcagtaagttttcc 54956 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 353 ccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccc 412 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| Sbjct: 54688 ccgagctttgaagggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccc 54747 Query: 413 tgatccca 420 |||||||| Sbjct: 54748 tgatccca 54755 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 513 cacggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctggct 572 ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 55059 cacggtagtgaactttaactctgtcgcctttgtgagcttgaatgctgcaggattctggct 55118 Query: 573 tgt 575 ||| Sbjct: 55119 tgt 55121 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 577 cttgacgccgatctggagcgccgacacgtcgccggacttcttggcgga 624 ||||||||||||||||||| ||| |||||||||||| ||||||||||| Sbjct: 56406 cttgacgccgatctggagctccgtcacgtcgccggatttcttggcgga 56453 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 245 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 304 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 54350 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 54409 Query: 305 agagttgctccgcctg 320 ||||| ||||| |||| Sbjct: 54410 agagtcgctccacctg 54425
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 422 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 481 |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 19124452 cctttgatcacttggccagtgcccaactcaaattcgattgggtcacctctttcatagcta 19124511 Query: 482 gaatcaaaaactgttccatcggtaagtgttcc 513 ||||||||| |||||||||| |||||| |||| Sbjct: 19124512 gaatcaaaatctgttccatcagtaagttttcc 19124543 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 353 ccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgcccaaaattccc 412 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||| Sbjct: 19124275 ccgagctttgaagggatcttcagcttcctcttctcgccaacgcacatgcccagaatgccc 19124334 Query: 413 tgatccca 420 |||||||| Sbjct: 19124335 tgatccca 19124342 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 513 cacggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctggct 572 ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 19124646 cacggtagtgaactttaactctgtcgcctttgtgagcttgaatgctgcaggattctggct 19124705 Query: 573 tgt 575 ||| Sbjct: 19124706 tgt 19124708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 245 tcctcgtctgatttgctagaaggctcgccattgactgcgacaagctctgtgtcgaatatg 304 ||||| || |||||||| | |||||||||||||| || |||||||| || ||||| ||| Sbjct: 19123937 tcctcatcggatttgctggctggctcgccattgacagcaacaagctcggtatcgaaaatg 19123996 Query: 305 agagttgctccgcctg 320 ||||| ||||| |||| Sbjct: 19123997 agagtcgctccacctg 19124012
>gb|U52045.1|VFU52045 Vicia faba immunophilin precursor (FKBP15) mRNA, complete cds Length = 750 Score = 87.7 bits (44), Expect = 4e-14 Identities = 128/156 (82%) Strand = Plus / Minus Query: 284 acaagctctgtgtcgaatatgagagttgctccgcctggaatggtaggtggtgatccctga 343 |||||||| ||||| ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 484 acaagctcagtgtcaaatataagtgttgcaccacctggaatagttggtggggaaccctgc 425 Query: 344 tccccgtagccgagctttgaagggatcttcagcttcctcttctcaccaatgcacatgccc 403 || || ||||| || |||| ||||| ||||| || | ||||||||||| ||||| ||| Sbjct: 424 tctccatagccaagttttgctgggattttcagttttcgcttctcaccaagacacattccc 365 Query: 404 aaaattccctgatcccatcctttgatcacttgacca 439 || | ||| || |||||||||||||||||||||||| Sbjct: 364 aataatccttggtcccatcctttgatcacttgacca 329
>ref|NM_189935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 85.7 bits (43), Expect = 2e-13 Identities = 139/171 (81%) Strand = Plus / Minus Query: 451 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgt 510 |||||||| |||||||| || ||||||||||||||||| |||| |||||| || |||| Sbjct: 216 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatcagtgagtga 157 Query: 511 tccacggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctgg 570 ||||| || || ||||| | | |||||||||||||||| | | |||| || ||||| Sbjct: 156 cccacgataatgcactttgattttgtctcctttgtgagcttgcagggtgcatgactctgg 97 Query: 571 cttgtacttgacgccgatctggagcgccgacacgtcgccggacttcttggc 621 ||||||||| || |||||||| ||| ||| || || |||||||||||||| Sbjct: 96 cttgtacttcacaccgatctgaagctccgtgacatctccggacttcttggc 46
>dbj|AK103859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148P20, full insert sequence Length = 713 Score = 85.7 bits (43), Expect = 2e-13 Identities = 139/171 (81%) Strand = Plus / Minus Query: 451 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatcggtaagtgt 510 |||||||| |||||||| || ||||||||||||||||| |||| |||||| || |||| Sbjct: 275 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatcagtgagtga 216 Query: 511 tccacggtagtgaactttaactctgtctcctttgtgagccgagatgctgcacgattctgg 570 ||||| || || ||||| | | |||||||||||||||| | | |||| || ||||| Sbjct: 215 cccacgataatgcactttgattttgtctcctttgtgagcttgcagggtgcatgactctgg 156 Query: 571 cttgtacttgacgccgatctggagcgccgacacgtcgccggacttcttggc 621 ||||||||| || |||||||| ||| ||| || || |||||||||||||| Sbjct: 155 cttgtacttcacaccgatctgaagctccgtgacatctccggacttcttggc 105
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 422 cctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctttcatagcta 481 |||||||||||||||||| || | ||||| |||||||||| | |||||| ||||| Sbjct: 18582 cctttgatcacttgaccaccaccaagctcaaaatcaattgggttatttctttcaaagcta 18523 Query: 482 gaatcaaaaactgttccatcggtaagtgttcc 513 ||||| ||||| ||||||||||| ||| |||| Sbjct: 18522 gaatcgaaaacagttccatcggtgagttttcc 18491 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Minus Query: 317 cctggaatggtaggtggtgatccctgatccccgtagccgagctttgaagggatcttcagc 376 |||||||| || ||||| || ||||| || ||||||||||| |||| || || ||||| Sbjct: 19873 cctggaatagtgggtggggaaccctgctctccgtagccgagttttgctggtattttcagt 19814 Query: 377 ttcctcttctcaccaatgcacatgcccaaaattccctgatcccatcct 424 || | ||||||||||| ||||| ||||| | ||| || ||||||||| Sbjct: 19813 tttcgcttctcaccaagacacattcccaataatccttggtcccatcct 19766
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 451 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatc 501 |||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 39908240 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatc 39908290 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agaatgttcatgtctcattg 142 |||||||||||||||||||| Sbjct: 3559354 agaatgttcatgtctcattg 3559373
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 451 aaattcaattgggtcacccctttcatagctagaatcaaaaactgttccatc 501 |||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 88948 aaattcaaaggggtcacctctgtcatagctagaatcaaacactgatccatc 88998
>ref|NM_124234.2| Arabidopsis thaliana FKBP15-2; FK506 binding / peptidyl-prolyl cis-trans isomerase AT5G48580 (FKBP15-2) mRNA, complete cds Length = 740 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 302 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 243 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 242 tcaaaactcgaatcgaatacagttccatcagtaagt 207
>ref|NM_113428.2| Arabidopsis thaliana FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase AT3G25220 (FKBP15-1) mRNA, complete cds Length = 684 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 357 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 298 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | || |||||||| || |||||||| Sbjct: 297 ctctcaaaacttgaatcaaagacagttccatc 266
>ref|XM_367309.1| Magnaporthe grisea 70-15 hypothetical protein (MG07234.4) partial mRNA Length = 603 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 378 tcctcttctcaccaatgcacatgcccaaaattccctgatcccatcctttgatcact 433 |||||||||| |||||||||||| |||| | ||| |||||||| || || |||||| Sbjct: 328 tcctcttctcgccaatgcacatgtccaacaatccttgatcccagcccttaatcact 273
>gb|BT012057.1| Arabidopsis thaliana At3g25220 mRNA sequence Length = 387 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 209 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 150 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | || |||||||| || |||||||| Sbjct: 149 ctctcaaaacttgaatcaaagacagttccatc 118
>gb|AY059146.1| Arabidopsis thaliana putative peptidyl-prolyl cis-trans isomerase (At5g48580) mRNA, complete cds Length = 523 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 281 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 222 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 221 tcaaaactcgaatcgaatacagttccatcagtaagt 186
>gb|AF370159.1| Arabidopsis thaliana putative peptidyl-prolyl cis-trans isomerase (At5g48580) mRNA, complete cds Length = 708 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 299 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 240 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 239 tcaaaactcgaatcgaatacagttccatcagtaagt 204
>gb|AY128760.1| Arabidopsis thaliana immunophilin (At3g25220) mRNA, complete cds Length = 519 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 284 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 225 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | || |||||||| || |||||||| Sbjct: 224 ctctcaaaacttgaatcaaagacagttccatc 193
>gb|AY062776.1| Arabidopsis thaliana immunophilin (At3g25220; MJL12.17) mRNA, complete cds Length = 639 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 312 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 253 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | || |||||||| || |||||||| Sbjct: 252 ctctcaaaacttgaatcaaagacagttccatc 221
>emb|BX833996.1|CNS0A0IF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZC04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 634 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 252 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 193 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 192 tcaaaactcgaatcgaatacagttccatcagtaagt 157
>gb|AY085294.1| Arabidopsis thaliana clone 143222 mRNA, complete sequence Length = 672 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 302 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 243 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 242 tcaaaactcgaatcgaatacagttccatcagtaagt 207
>gb|U52047.1|ATU52047 Arabidopsis thaliana immunophilin (FKBP15-2) mRNA, complete cds Length = 662 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Minus Query: 413 tgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcacccctt 472 |||||||| |||||||| || |||||| | || |||| ||| |||| || ||||||||| Sbjct: 285 tgatcccaacctttgataacctgaccacttcctaatttaaactcaaacggatcacccctt 226 Query: 473 tcatagctagaatcaaaaactgttccatcggtaagt 508 ||| | || ||||| || || |||||||| |||||| Sbjct: 225 tcaaaactcgaatcgaatacagttccatcagtaagt 190
>gb|U52046.1|ATU52046 Arabidopsis thaliana immunophilin (FKBP15-1) mRNA, complete cds Length = 618 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 287 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 228 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | || |||||||| || |||||||| Sbjct: 227 ctctcaaaacttgaatcaaagacagttccatc 196
>dbj|AB227133.1| Aspergillus oryzae cDNA, contig sequence: AoEST3996 Length = 569 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Minus Query: 382 cttctcaccaatgcacatgcccaaaattccctgatcccatcc 423 |||||||||||||||||| |||||| |||| ||||||||| Sbjct: 366 cttctcaccaatgcacatatccaaaagaccctcatcccatcc 325
>emb|AL112386.1|CNS01A22 Botrytis cinerea strain T4 cDNA library Length = 900 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 aacatggtagataggagaatta 39 |||||||||||||||||||||| Sbjct: 577 aacatggtagataggagaatta 556
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ggtaatagaatgttcatgtct 137 ||||||||||||||||||||| Sbjct: 208517 ggtaatagaatgttcatgtct 208537
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ggtaatagaatgttcatgtct 137 ||||||||||||||||||||| Sbjct: 4019 ggtaatagaatgttcatgtct 4039
>gb|AC083845.15| Homo sapiens, clone RP11-459L5, complete sequence Length = 132843 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 tctgccctacaagagtaagttcccc 169 |||||| |||||||||||||||||| Sbjct: 40449 tctgccttacaagagtaagttcccc 40425
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 382 cttctcaccaatgcacatgcccaaaattccctgatcccatc 422 |||||||||||||||||| |||||| |||| |||||||| Sbjct: 4024960 cttctcaccaatgcacatatccaaaagaccctcatcccatc 4024920
>gb|AC022468.5|AC022468 Homo sapiens chromosome 15 clone RP11-546B15 map 15q15, complete sequence Length = 183539 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cctttcatagctagaatcaaa 489 ||||||||||||||||||||| Sbjct: 117524 cctttcatagctagaatcaaa 117504
>gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, complete sequence Length = 203148 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 tctgccctacaagagtaagttcccc 169 |||||| |||||||||||||||||| Sbjct: 164025 tctgccttacaagagtaagttcccc 164001
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aacaaaagcaaatgtaacatg 23 ||||||||||||||||||||| Sbjct: 183621 aacaaaagcaaatgtaacatg 183601
>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence Length = 169326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ggtaatagaatgttcatgtct 137 ||||||||||||||||||||| Sbjct: 65876 ggtaatagaatgttcatgtct 65856
>gb|AY423023.1| Danio rerio KIAA1376-like protein mRNA, complete cds Length = 2687 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 catgcccaaaattccctgat 416 |||||||||||||||||||| Sbjct: 1795 catgcccaaaattccctgat 1776
>ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (DDB0204309), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgac 437 |||| ||||||||||||||| ||||||| Sbjct: 341 ccctcatcccatcctttgatgacttgac 314
>gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete sequence Length = 169680 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ccaatgcacatgcccaaaat 408 |||||||||||||||||||| Sbjct: 91503 ccaatgcacatgcccaaaat 91522
>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence Length = 183048 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ccaatgcacatgcccaaaat 408 |||||||||||||||||||| Sbjct: 43716 ccaatgcacatgcccaaaat 43735
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 acgtcgccggacttcttggc 621 |||||||||||||||||||| Sbjct: 2057448 acgtcgccggacttcttggc 2057467
>ref|XM_426415.1| PREDICTED: Gallus gallus similar to SH3 and multiple ankyrin repeat domains 2 isoform 1; cortactin SH3 domain-binding protein; cortactin binding protein 1; GKAP/SAPAP interacting protein (LOC428858), mRNA Length = 10242 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 aactttaactctgtctcctttgtg 546 |||||| ||||||||||||||||| Sbjct: 3540 aacttttactctgtctcctttgtg 3517
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tagaatgttcatgtctcatt 141 |||||||||||||||||||| Sbjct: 55959 tagaatgttcatgtctcatt 55978
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcagcttcctcttctcacca 391 |||||||||||||||||||| Sbjct: 60910 tcagcttcctcttctcacca 60891
>gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosome 18, complete sequence Length = 167998 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcagcttcctcttctcacca 391 |||||||||||||||||||| Sbjct: 16939 tcagcttcctcttctcacca 16958
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcagcttcctcttctcacca 391 |||||||||||||||||||| Sbjct: 45752 tcagcttcctcttctcacca 45771
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tagaatgttcatgtctcatt 141 |||||||||||||||||||| Sbjct: 94431 tagaatgttcatgtctcatt 94450
>emb|AL162853.17| Human DNA sequence from clone RP11-363G2 on chromosome 13 Contains a ribosomal protein L7a (RPL7A) pseudogene, a pseudogene similar to part of inositol hexakisphosphate kinase 1 (IHPK1) (KIAA0263), a novel pseudogene, a novel gene and 2 CpG islands, complete sequence Length = 123693 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gctttgaagggatcttcagc 376 |||||||||||||||||||| Sbjct: 24830 gctttgaagggatcttcagc 24849
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 tctgtgtcgaatatgagagt 309 |||||||||||||||||||| Sbjct: 63599 tctgtgtcgaatatgagagt 63618
>gb|AC069223.15| Homo sapiens 3 BAC RP11-398O21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179767 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ggagaattattccagagaat 50 |||||||||||||||||||| Sbjct: 11287 ggagaattattccagagaat 11268
>emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in linkage group 11, complete sequence Length = 144678 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 catgcccaaaattccctgat 416 |||||||||||||||||||| Sbjct: 132909 catgcccaaaattccctgat 132890
>gb|AC123021.9| Homo sapiens 12 BAC RP11-255P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104395 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aattacataggataacaaaa 67 |||||||||||||||||||| Sbjct: 102581 aattacataggataacaaaa 102562
>gb|AC068763.11| Homo sapiens 3 BAC RP11-133K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180638 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ggagaattattccagagaat 50 |||||||||||||||||||| Sbjct: 157154 ggagaattattccagagaat 157173
>gb|AC090679.5| Homo sapiens 12 BAC RP11-80O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156596 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 aattacataggataacaaaa 67 |||||||||||||||||||| Sbjct: 156377 aattacataggataacaaaa 156396
>ref|NM_029714.1| Mus musculus RIKEN cDNA 1700067C01 gene (1700067C01Rik), mRNA Length = 4456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tagaatgttcatgtctcatt 141 |||||||||||||||||||| Sbjct: 4134 tagaatgttcatgtctcatt 4153
>ref|NM_133149.2| Drosophila melanogaster CG8051-RA (CG8051), mRNA Length = 2567 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccaatgcacatgcccaaaat 408 |||||||||||||||||||| Sbjct: 1964 ccaatgcacatgcccaaaat 1945
>gb|AC021873.24| Homo sapiens 3 BAC RP11-475J9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 9745 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ggagaattattccagagaat 50 |||||||||||||||||||| Sbjct: 3132 ggagaattattccagagaat 3113
>gb|AY069861.1| Drosophila melanogaster SD10554 full length cDNA Length = 2548 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccaatgcacatgcccaaaat 408 |||||||||||||||||||| Sbjct: 1933 ccaatgcacatgcccaaaat 1914
>dbj|AK077059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932441M08 product:hypothetical P-loop containing nucleotide triphosphate hydrolases structure containing protein, full insert sequence Length = 4456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tagaatgttcatgtctcatt 141 |||||||||||||||||||| Sbjct: 4134 tagaatgttcatgtctcatt 4153
>gb|AC102411.12| Mus musculus chromosome 18, clone RP24-374D7, complete sequence Length = 171918 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcagcttcctcttctcacca 391 |||||||||||||||||||| Sbjct: 99903 tcagcttcctcttctcacca 99922
>gb|AY088043.1| Arabidopsis thaliana clone 40618 mRNA, complete sequence Length = 659 Score = 40.1 bits (20), Expect = 8.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 410 ccctgatcccatcctttgatcacttgaccagtgcccaattcaaattcaattgggtcaccc 469 ||||| ||||||||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct: 358 ccctggtcccatcctgggatgacttgaccagttccaagctcaaactcaatagggtcacct 299 Query: 470 ctttcatagctagaatcaaaaactgttccatc 501 || ||| | | |||||||| || |||||||| Sbjct: 298 ctctcaaaaattgaatcaaagacagttccatc 267
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agaatgttcatgtctcattg 142 |||||||||||||||||||| Sbjct: 127422 agaatgttcatgtctcattg 127441
>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete sequence Length = 297969 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ccaatgcacatgcccaaaat 408 |||||||||||||||||||| Sbjct: 246825 ccaatgcacatgcccaaaat 246844
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcagcttcctcttctcacca 391 |||||||||||||||||||| Sbjct: 10144 tcagcttcctcttctcacca 10125
>gb|BC068345.1| Danio rerio arrestin domain containing 2, mRNA (cDNA clone MGC:85652 IMAGE:6805919), complete cds Length = 2522 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 catgcccaaaattccctgat 416 |||||||||||||||||||| Sbjct: 1639 catgcccaaaattccctgat 1620
>ref|NM_199939.1| Danio rerio arrestin domain containing 2 (arrdc2), mRNA Length = 2687 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 catgcccaaaattccctgat 416 |||||||||||||||||||| Sbjct: 1795 catgcccaaaattccctgat 1776 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,142,178 Number of Sequences: 3902068 Number of extensions: 5142178 Number of successful extensions: 90541 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 90291 Number of HSP's gapped (non-prelim): 248 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)