| Clone Name | rbags10o18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 270 bits (136), Expect = 3e-69 Identities = 266/312 (85%) Strand = Plus / Minus Query: 66 gagactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtctt 125 |||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||| ||| Sbjct: 902 gagactggccttcctctgctcgtatgtcagtttcttggggttgtacctcttgtgctcctt 843 Query: 126 tggtggttccttggttgattttgctattgnangatcagcacgaatggcancatgaacctt 185 |||||| | ||||||||| || | | | | |||||||||| |||||| |||| ||||| Sbjct: 842 tggtggctgcttggttgacttgaccacagaaggatcagcacggatggcagcatggacctt 783 Query: 186 cttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtg 245 ||||||||| ||||||||| | |||||||| ||||||| || ||||||||||||||||| Sbjct: 782 cttgtacagagcttccatgtcgtcagcctcaattcccttcttaatgtactcactgaagtg 723 Query: 246 agattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccc 305 ||| || |||||||| || ||||| ||||| || | ||||||||||||||||||| || Sbjct: 722 agactggtacttctctggctcctcttcagcgaggttcctcatgtagtcagcaacatggcc 663 Query: 306 tccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagcc 365 ||||||||||| ||||| | || ||||||||||||||||| |||||||||||||| || Sbjct: 662 accatagatgtacttgcgatggatatcagcatccagctgcttgtcatccttcttgaaacc 603 Query: 366 agcaaatctctt 377 |||||| ||||| Sbjct: 602 agcaaacctctt 591
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 270 bits (136), Expect = 3e-69 Identities = 263/308 (85%) Strand = Plus / Minus Query: 70 ctggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtctttggt 129 ||||||||||||||||| || |||||||||| ||| ||||||||||| ||| ||||||| Sbjct: 914 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 855 Query: 130 ggttccttggttgattttgctattgnangatcagcacgaatggcancatgaaccttcttg 189 || | ||||||||| || | || | | |||||||||| |||||| |||| ||||||||| Sbjct: 854 ggctgcttggttgacttgacaatggaaggatcagcacggatggcagcatggaccttcttg 795 Query: 190 tacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtgagat 249 ||||| ||||||||| |||||||||| ||||||| || |||||||||||||||||||| Sbjct: 794 tacagagcttccatgtcatcagcctcaattcccttcttaatgtactcactgaagtgagac 735 Query: 250 tgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccctcca 309 || |||||||| || ||||| ||||| || | ||||||||||||||||||| || ||| Sbjct: 734 tggtacttctctggctcctcttcagcgaggttcctcatgtagtcagcaacatggccacca 675 Query: 310 tagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagccagca 369 |||||||| ||||| | || ||||||||||||||||| |||||||||||||| |||||| Sbjct: 674 tagatgtacttgcgatggatatcagcatccagctgcttgtcatccttcttgaaaccagca 615 Query: 370 aatctctt 377 || ||||| Sbjct: 614 aacctctt 607
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 246 bits (124), Expect = 4e-62 Identities = 263/312 (84%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtcttt 126 ||||||||||||||||| |||||||| ||||||| | | ||||| |||||||| ||| Sbjct: 833 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 774 Query: 127 ggtggttccttggttgattttgctattgnangatcagcacgaatggcancatgaaccttc 186 ||| | |||||||||||| || || | | |||||||||| |||||| |||| |||||| Sbjct: 773 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 714 Query: 187 ttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtga 246 |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| Sbjct: 713 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgg 654 Query: 247 gattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccct 306 | ||| | |||||||||||||| || |||| ||| ||||||||||||| || ||||| Sbjct: 653 gcttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgccca 594 Query: 307 ccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagcca 366 || |||||||| |||||| |||| |||| ||| ||||||||||| ||||||||||| ||| Sbjct: 593 ccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaaccca 534 Query: 367 gcaaatctcttg 378 ||||| |||||| Sbjct: 533 gcaaacctcttg 522
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 246 bits (124), Expect = 4e-62 Identities = 263/312 (84%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtcttt 126 ||||||||||||||||| |||||||| ||||||| | | ||||| |||||||| ||| Sbjct: 929 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 870 Query: 127 ggtggttccttggttgattttgctattgnangatcagcacgaatggcancatgaaccttc 186 ||| | |||||||||||| || || | | |||||||||| |||||| |||| |||||| Sbjct: 869 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 810 Query: 187 ttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtga 246 |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| Sbjct: 809 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgg 750 Query: 247 gattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccct 306 | ||| | |||||||||||||| || |||| ||| ||||||||||||| || ||||| Sbjct: 749 gcttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgccca 690 Query: 307 ccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagcca 366 || |||||||| |||||| |||| |||| ||| ||||||||||| ||||||||||| ||| Sbjct: 689 ccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaaccca 630 Query: 367 gcaaatctcttg 378 ||||| |||||| Sbjct: 629 gcaaacctcttg 618
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 238 bits (120), Expect = 1e-59 Identities = 262/312 (83%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtcttt 126 ||||||||||||||||| |||||||| ||||||| | | ||||| |||||||| ||| Sbjct: 930 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 871 Query: 127 ggtggttccttggttgattttgctattgnangatcagcacgaatggcancatgaaccttc 186 ||| | |||||||||||| || || | | |||||||||| |||||| |||| |||||| Sbjct: 870 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 811 Query: 187 ttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtga 246 |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| Sbjct: 810 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgg 751 Query: 247 gattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccct 306 | ||| | |||||||||||||| || |||| ||| ||||||||||||| || ||||| Sbjct: 750 gcttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgccca 691 Query: 307 ccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagcca 366 || |||||||| |||||| |||| ||| ||| ||||||||||| ||||||||||| ||| Sbjct: 690 ccgtagatgtacttgcggtgaataccagaatcaagctgcttctcgtccttcttgaaccca 631 Query: 367 gcaaatctcttg 378 ||||| |||||| Sbjct: 630 gcaaacctcttg 619
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 232 bits (117), Expect = 7e-58 Identities = 263/313 (84%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtcttt 126 ||||||||||||||||| |||||||| ||||||| | | ||||| |||||||| ||| Sbjct: 843 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 784 Query: 127 ggtggttccttggttgattttgctattgnang-atcagcacgaatggcancatgaacctt 185 ||| | |||||||||||| || || | | | ||||||||| |||||| |||| ||||| Sbjct: 783 ggttccttcttggttgatttggccatggtagggatcagcacggatggcagcatggacctt 724 Query: 186 cttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtg 245 ||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| Sbjct: 723 cttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 664 Query: 246 agattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccc 305 | ||| | |||||||||||||| || |||| ||| ||||||||||||| || ||||| Sbjct: 663 ggcttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgccc 604 Query: 306 tccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagcc 365 || |||||||| |||||| |||| |||| ||| ||||||||||| ||||||||||| || Sbjct: 603 accgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaaccc 544 Query: 366 agcaaatctcttg 378 |||||| |||||| Sbjct: 543 agcaaacctcttg 531
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 228 bits (115), Expect = 1e-56 Identities = 263/315 (83%) Strand = Plus / Minus Query: 64 acgagactggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtc 123 ||||||||||||||||||||||||||||||||||||| | | ||||| |||||||| || Sbjct: 845 acgagactggccttcctctgctcgtaggtcagcttcttgaggttgtatctcttgtgggta 786 Query: 124 tttggtggttccttggttgattttgctattgnangatcagcacgaatggcancatgaacc 183 ||| | |||||| ||||| || || | | |||| || || |||||| |||| ||| Sbjct: 785 gccggttccttcttggtcgatttggccatggtaggatcggcgcggatggcagcatggacc 726 Query: 184 ttcttgtacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaag 243 ||||||||||||| ||||||||||||||| || ||||||| |||| ||||||||| ||| Sbjct: 725 ttcttgtacagtgattccatgccatcagcgtcaattcccttcttgaggtactcactaaag 666 Query: 244 tgagattgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgc 303 || | ||| | |||||||||||||| ||||||| ||| ||||||||||||| || ||| Sbjct: 665 tgggcttggaatttctcaggttcctcctcagccatagacctcatgtagtcagccacgtgc 606 Query: 304 cctccatagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaag 363 || || |||||||| |||||| |||| |||| ||| ||||||||||| ||||||||||| Sbjct: 605 ccaccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaac 546 Query: 364 ccagcaaatctcttg 378 |||||||| |||||| Sbjct: 545 ccagcaaacctcttg 531
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 182 bits (92), Expect = 5e-43 Identities = 252/308 (81%) Strand = Plus / Minus Query: 70 ctggccttcctctgctcgtaggtcagcttctngggattgtacctcttgtgcgtctttggt 129 ||||||||||||||||| || |||||||||| ||| ||||||||||| ||| ||||||| Sbjct: 913 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 854 Query: 130 ggttccttggttgattttgctattgnangatcagcacgaatggcancatgaaccttcttg 189 || | ||||||||| || | || | | |||| ||||| |||||| |||| ||||||||| Sbjct: 853 ggctgcttggttgacttaacaatggaaggatcggcacggatggcagcatggaccttcttg 794 Query: 190 tacagtgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtgagat 249 ||||| ||||| || |||||||||| | ||||| || |||||| |||||||||| Sbjct: 793 tacagcgcttctatttcatcagcctcaactcccttcttaatgtacgcactgaagtggctc 734 Query: 250 tgntacttctcaggttcctcatcagccagngacttcatgtagtcagcaacatgccctcca 309 || ||||| || || ||||| ||||| || ||||||||||||||||||||| || ||| Sbjct: 733 tggtacttttctggctcctcttcagcaaggttcttcatgtagtcagcaacatggccacca 674 Query: 310 tagatgtatttgcggagaatctcagcatccagctgcttctcatccttcttgaagccagca 369 |||||||| ||||| | | |||||||||| |||||| || ||||||||||| |||||| Sbjct: 673 tagatgtacctgcggtgggtatcagcatccaactgcttgtcgtccttcttgaatccagca 614 Query: 370 aatctctt 377 || ||||| Sbjct: 613 aacctctt 606
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 3e-29 Identities = 117/135 (86%) Strand = Plus / Minus Query: 135 cttggttgattttgctattgnangatcagcacgaatggcancatgaaccttcttgtacag 194 |||||||||||| || || | | |||||||||| |||||| |||| |||||||||||||| Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133 Query: 195 tgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtgagattgnta 254 |||||||||||||||||| || ||||||| |||| ||||||||||||||| | ||| | Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 38969073 Query: 255 cttctcaggttcctc 269 |||||||||||||| Sbjct: 38969072 tttctcaggttcctc 38969058 Score = 105 bits (53), Expect = 1e-19 Identities = 94/109 (86%) Strand = Plus / Minus Query: 169 atggcancatgaaccttcttgtacagtgcttccatgccatcagcctcgattccctnnttg 228 |||||| |||| |||||||||||||||| ||||||||||||||| || ||||||| ||| Sbjct: 38963826 atggcagcatggaccttcttgtacagtgattccatgccatcagcgtcaattcccttcttg 38963767 Query: 229 atgtactcactgaagtgagattgntacttctcaggttcctcatcagcca 277 | ||||||||| ||||| | ||| | |||||||||||||| ||||||| Sbjct: 38963766 aggtactcactaaagtgggcttggaatttctcaggttcctcctcagcca 38963718 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 38968843 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 38968784 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 38968783 gcttctcgtccttcttgaacccagcaaacctcttg 38968749 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 38963525 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 38963466 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 38963465 gcttctcgtccttcttgaacccagcaaacctcttg 38963431 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 64 acgagactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||||||||||||||||||||||| Sbjct: 38964017 acgagactggccttcctctgctcgtaggtcagcttct 38963981 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||| |||||||| ||||||| Sbjct: 38969344 agactggccttcctctgttcgtaggttagcttct 38969311
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 137 bits (69), Expect = 3e-29 Identities = 117/135 (86%) Strand = Plus / Minus Query: 135 cttggttgattttgctattgnangatcagcacgaatggcancatgaaccttcttgtacag 194 |||||||||||| || || | | |||||||||| |||||| |||| |||||||||||||| Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766 Query: 195 tgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtgagattgnta 254 |||||||||||||||||| || ||||||| |||| ||||||||||||||| | ||| | Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 42706 Query: 255 cttctcaggttcctc 269 |||||||||||||| Sbjct: 42705 tttctcaggttcctc 42691 Score = 105 bits (53), Expect = 1e-19 Identities = 94/109 (86%) Strand = Plus / Minus Query: 169 atggcancatgaaccttcttgtacagtgcttccatgccatcagcctcgattccctnnttg 228 |||||| |||| |||||||||||||||| ||||||||||||||| || ||||||| ||| Sbjct: 37459 atggcagcatggaccttcttgtacagtgattccatgccatcagcgtcaattcccttcttg 37400 Query: 229 atgtactcactgaagtgagattgntacttctcaggttcctcatcagcca 277 | ||||||||| ||||| | ||| | |||||||||||||| ||||||| Sbjct: 37399 aggtactcactaaagtgggcttggaatttctcaggttcctcctcagcca 37351 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 42476 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 42417 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 42416 gcttctcgtccttcttgaacccagcaaacctcttg 42382 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 37158 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 37099 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 37098 gcttctcgtccttcttgaacccagcaaacctcttg 37064 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 64 acgagactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||||||||||||||||||||||| Sbjct: 37650 acgagactggccttcctctgctcgtaggtcagcttct 37614 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||| |||||||| ||||||| Sbjct: 42977 agactggccttcctctgttcgtaggttagcttct 42944
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 137 bits (69), Expect = 3e-29 Identities = 117/135 (86%) Strand = Plus / Minus Query: 135 cttggttgattttgctattgnangatcagcacgaatggcancatgaaccttcttgtacag 194 |||||||||||| || || | | |||||||||| |||||| |||| |||||||||||||| Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919 Query: 195 tgcttccatgccatcagcctcgattccctnnttgatgtactcactgaagtgagattgnta 254 |||||||||||||||||| || ||||||| |||| ||||||||||||||| | ||| | Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 133859 Query: 255 cttctcaggttcctc 269 |||||||||||||| Sbjct: 133858 tttctcaggttcctc 133844 Score = 105 bits (53), Expect = 1e-19 Identities = 94/109 (86%) Strand = Plus / Minus Query: 169 atggcancatgaaccttcttgtacagtgcttccatgccatcagcctcgattccctnnttg 228 |||||| |||| |||||||||||||||| ||||||||||||||| || ||||||| ||| Sbjct: 128612 atggcagcatggaccttcttgtacagtgattccatgccatcagcgtcaattcccttcttg 128553 Query: 229 atgtactcactgaagtgagattgntacttctcaggttcctcatcagcca 277 | ||||||||| ||||| | ||| | |||||||||||||| ||||||| Sbjct: 128552 aggtactcactaaagtgggcttggaatttctcaggttcctcctcagcca 128504 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 133629 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 133570 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 133569 gcttctcgtccttcttgaacccagcaaacctcttg 133535 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 ||||||||||||| || ||||| || |||||||| |||||| |||| |||| ||| |||| Sbjct: 128311 tcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaagct 128252 Query: 344 gcttctcatccttcttgaagccagcaaatctcttg 378 ||||||| ||||||||||| |||||||| |||||| Sbjct: 128251 gcttctcgtccttcttgaacccagcaaacctcttg 128217 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 64 acgagactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||||||||||||||||||||||| Sbjct: 128803 acgagactggccttcctctgctcgtaggtcagcttct 128767 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 67 agactggccttcctctgctcgtaggtcagcttct 100 ||||||||||||||||| |||||||| ||||||| Sbjct: 134130 agactggccttcctctgttcgtaggttagcttct 134097
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 131 bits (66), Expect = 2e-27 Identities = 130/152 (85%) Strand = Plus / Minus Query: 226 ttgatgtactcactgaagtgagattgntacttctcaggttcctcatcagccagngacttc 285 ||||||||||| |||||||||| || |||||||| || |||||||||||||| |||| Sbjct: 581 ttgatgtactcgctgaagtgagcctggtacttctcgggctcctcatcagccagattcttc 522 Query: 286 atgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagctgc 345 || || ||||||||||| ||||||||||| ||||| | || ||||||||||||||| Sbjct: 521 atatactcagcaacatggagaccatagatgtacttgcgatggatatcagcatccagctgc 462 Query: 346 ttctcatccttcttgaagccagcaaatctctt 377 || ||||||||||||||||||||||| ||||| Sbjct: 461 ttatcatccttcttgaagccagcaaacctctt 430
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/61 (86%) Strand = Plus / Minus Query: 206 catcagcctcgattccctnnttgatgtactcactgaagtgagattgntacttctcaggtt 265 |||| ||||| || |||| ||||||||||| |||||||||||||| || |||||||||| Sbjct: 721 catcggcctcaatgcccttcttgatgtactcgctgaagtgagattgatatttctcaggtt 662 Query: 266 c 266 | Sbjct: 661 c 661
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| |||||||||||| ||||| |||||| Sbjct: 1285 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 1230
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| |||||||||||| ||||| |||||| Sbjct: 624 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 569
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| |||||||||||| ||||| |||||| Sbjct: 660 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 605
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 50.1 bits (25), Expect = 0.005 Identities = 76/93 (81%) Strand = Plus / Plus Query: 282 cttcatgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccag 341 |||||| ||| |||||||||| || ||| |||| ||||| ||| ||| ||||| ||| || Sbjct: 46642 cttcatataggcagcaacatgtccaccaaagatatattttcggtgaacctcaggatcaag 46701 Query: 342 ctgcttctcatccttcttgaagccagcaaatct 374 || |||| ||||||| |||||||||||||| Sbjct: 46702 ctctttcttctccttctcaaagccagcaaatct 46734
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 48.1 bits (24), Expect = 0.021 Identities = 29/31 (93%) Strand = Plus / Minus Query: 163 gcacgaatggcancatgaaccttcttgtaca 193 ||||| |||||| |||||||||||||||||| Sbjct: 854 gcacgtatggcagcatgaaccttcttgtaca 824 Score = 40.1 bits (20), Expect = 5.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 91 gtcagcttctngggattgtacctcttgtgcgtctt 125 |||||||||| ||||||||||||||||| |||| Sbjct: 926 gtcagcttcttcagattgtacctcttgtgcttctt 892
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| || || |||||| ||||| |||||| Sbjct: 20215 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 20270
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| || || |||||| ||||| |||||| Sbjct: 624 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 569
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatcca 340 |||||| ||||||||||| || |||||||| || || |||||| ||||| |||||| Sbjct: 486 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 431
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 48.1 bits (24), Expect = 0.021 Identities = 69/85 (81%) Strand = Plus / Minus Query: 163 gcacgaatggcancatgaaccttcttgtacagtgcttccatgccatcagcctcgattccc 222 |||||||| ||| |||||||||||||||| ||| | || || |||||||| || || || Sbjct: 805 gcacgaattgcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccct 746 Query: 223 tnnttgatgtactcactgaagtgag 247 | ||||| || | ||||||||||| Sbjct: 745 ttcttgatatattgactgaagtgag 721
>emb|AL116508.1|CNS01D8K Botrytis cinerea strain T4 cDNA library Length = 756 Score = 46.1 bits (23), Expect = 0.082 Identities = 50/59 (84%) Strand = Plus / Minus Query: 285 catgtagtcagcaacatgccctccatagatgtatttgcggagaatctcagcatccagct 343 |||||| ||||| || || || ||| ||||||||||||||||| |||| ||||| |||| Sbjct: 650 catgtactcagcgacgtgtccgccaaagatgtatttgcggagagtctcggcatcgagct 592
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 44.1 bits (22), Expect = 0.32 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 atggcancatgaaccttcttgtaca 193 |||||| |||||||||||||||||| Sbjct: 771 atggcagcatgaaccttcttgtaca 747
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 44.1 bits (22), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Minus Query: 163 gcacgaatggcancatgaaccttcttgta 191 |||||||| ||| |||||||||||||||| Sbjct: 758 gcacgaattgcagcatgaaccttcttgta 730
>gb|AC161244.2| Mus musculus BAC clone RP24-393O16 from chromosome 13, complete sequence Length = 201429 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ttctcatccttcttgaagcca 366 ||||||||||||||||||||| Sbjct: 56624 ttctcatccttcttgaagcca 56644
>gb|AC121916.3| Mus musculus BAC clone RP24-192K21 from chromosome 13, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ttctcatccttcttgaagcca 366 ||||||||||||||||||||| Sbjct: 8327 ttctcatccttcttgaagcca 8307
>gb|AC112258.4| Mus musculus BAC clone RP23-169M10 from 8, complete sequence Length = 203519 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 ggagaatctcagcatccagctgctt 347 ||||||||||||||||||| ||||| Sbjct: 74360 ggagaatctcagcatccagatgctt 74336
>emb|AL117160.1|CNS01DQO Botrytis cinerea strain T4 cDNA library Length = 655 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 305 agatgtatttgcggagagtctcggcatcgagct 273
>emb|AL116864.1|CNS01DIG Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 631 agatgtatttgcggagagtctcggcatcgagct 599
>emb|AL114236.1|CNS01BHG Botrytis cinerea strain T4 cDNA library Length = 576 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 272 agatgtatttgcggagagtctcggcatcgagct 240
>emb|AL114065.1|CNS01BCP Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 71 agatgtatttgcggagagtctcggcatcgagct 39
>emb|AL112219.1|CNS019XF Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 500 agatgtatttgcggagagtctcggcatcgagct 468
>emb|AL111502.1|CNS019DI Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 632 agatgtatttgcggagagtctcggcatcgagct 600
>emb|AL110846.1|CNS018VB Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 640 agatgtatttgcggagagtctcggcatcgagct 608
>emb|AL111011.1|CNS018ZW Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 610 agatgtatttgcggagagtctcggcatcgagct 578
>emb|AL110953.1|CNS018YA Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 628 agatgtatttgcggagagtctcggcatcgagct 596
>emb|AL110946.1|CNS018Y3 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 631 agatgtatttgcggagagtctcggcatcgagct 599
>emb|AL110903.1|CNS018WW Botrytis cinerea strain T4 cDNA library Length = 675 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 agatgtatttgcggagaatctcagcatccagct 343 ||||||||||||||||| |||| ||||| |||| Sbjct: 338 agatgtatttgcggagagtctcggcatcgagct 306
>gb|AC155170.3| Mus musculus BAC clone RP23-116K3 from chromosome 8, complete sequence Length = 228121 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 ggagaatctcagcatccagctgctt 347 ||||||||||||||||||| ||||| Sbjct: 154163 ggagaatctcagcatccagatgctt 154139
>emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA sequence Length = 639 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 ttggtggttccttggttgattttgc 149 ||||||||||||||| ||||||||| Sbjct: 341 ttggtggttccttgggtgattttgc 317
>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence Length = 257924 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gagactggccttcctctgct 85 |||||||||||||||||||| Sbjct: 17640 gagactggccttcctctgct 17621
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 atctcagcatccagctgcttctca 351 |||||||||||||||| ||||||| Sbjct: 77021 atctcagcatccagctacttctca 77044
>gb|AC006729.1| Caenorhabditis elegans cosmid Y24D9A, complete sequence Length = 41172 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 atccagctgcttctcatcct 355 |||||||||||||||||||| Sbjct: 4649 atccagctgcttctcatcct 4630
>gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete sequence Length = 122855 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 atccagctgcttctcatcct 355 |||||||||||||||||||| Sbjct: 32141 atccagctgcttctcatcct 32160
>ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+ ATPase 2), transcript variant 1 (LOC488636), mRNA Length = 3039 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccttcctctgctcgtaggtc 93 |||||||||||||||||||| Sbjct: 2815 ccttcctctgctcgtaggtc 2796
>ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+ ATPase 2), transcript variant 2 (LOC488636), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccttcctctgctcgtaggtc 93 |||||||||||||||||||| Sbjct: 2833 ccttcctctgctcgtaggtc 2814
>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3, complete sequence Length = 133351 Score = 40.1 bits (20), Expect = 5.0 Identities = 28/31 (90%) Strand = Plus / Minus Query: 164 cacgaatggcancatgaaccttcttgtacag 194 ||||||||||| ||| ||||||||| ||||| Sbjct: 9385 cacgaatggcatcattaaccttcttatacag 9355
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tggttccttggttgattttg 148 |||||||||||||||||||| Sbjct: 134118 tggttccttggttgattttg 134137
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgc 303 |||||||||||||||||||| Sbjct: 16526 tcatgtagtcagcaacatgc 16507
>gb|AF067621.2| Caenorhabditis elegans cosmid F55F10, complete sequence Length = 30835 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 atccagctgcttctcatcct 355 |||||||||||||||||||| Sbjct: 23284 atccagctgcttctcatcct 23265
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gttccttggttgattttgct 150 |||||||||||||||||||| Sbjct: 35316 gttccttggttgattttgct 35297
>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains the 3' end of the RNAH gene for an RNA helicase, the 5' end of the SIM1 gene for single-minded homolog 1 (Drosophila), an RP42 homolog pseudogene a novel gene and three CpG islands, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 5.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 242 agtgagattgntacttctcaggttcct 268 |||||||||| |||| ||||||||||| Sbjct: 107505 agtgagattgttactcctcaggttcct 107531
>ref|XM_781978.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA topoisomerase II, alpha isozyme (LOC582001), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gctgcttctcatccttcttg 360 |||||||||||||||||||| Sbjct: 2233 gctgcttctcatccttcttg 2214
>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence Length = 230597 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gagactggccttcctctgct 85 |||||||||||||||||||| Sbjct: 56125 gagactggccttcctctgct 56144
>gb|AC166574.1| Mus musculus BAC clone RP23-131O4 from chromosome 14, complete sequence Length = 220918 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 cagcttctngggattgtacctct 115 |||||||| |||||||||||||| Sbjct: 148989 cagcttctagggattgtacctct 148967
>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence Length = 203937 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tggttccttggttgattttg 148 |||||||||||||||||||| Sbjct: 33502 tggttccttggttgattttg 33521
>gb|AC084750.3| Homo sapiens BAC clone RP11-215J17 from 4, complete sequence Length = 154693 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tctcatccttcttgaagccagcaa 370 |||||||| ||||||||||||||| Sbjct: 112958 tctcatccctcttgaagccagcaa 112981
>ref|NR_002685.1| Caenorhabditis elegans strain Bristol N2 chromosome X Length = 2199 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 atccagctgcttctcatcct 355 |||||||||||||||||||| Sbjct: 1001 atccagctgcttctcatcct 1020
>ref|NM_068150.3| Caenorhabditis elegans F55F10.1 (F55F10.1) mRNA, complete cds Length = 13378 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 atccagctgcttctcatcct 355 |||||||||||||||||||| Sbjct: 11151 atccagctgcttctcatcct 11132
>dbj|AK034688.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430024N04 product:unclassifiable, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tggttccttggttgattttg 148 |||||||||||||||||||| Sbjct: 1763 tggttccttggttgattttg 1744
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcatgtagtcagcaacatgc 303 |||||||||||||||||||| Sbjct: 630 tcatgtagtcagcaacatgc 611
>ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.5 polypeptide (atp1a1a.5), mRNA Length = 3838 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccttcctctgctcgtaggtc 93 |||||||||||||||||||| Sbjct: 2810 ccttcctctgctcgtaggtc 2791
>gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9 (atp1a1a.5) mRNA, complete cds Length = 3838 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccttcctctgctcgtaggtc 93 |||||||||||||||||||| Sbjct: 2810 ccttcctctgctcgtaggtc 2791 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,452,963 Number of Sequences: 3902068 Number of extensions: 2452963 Number of successful extensions: 49469 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49340 Number of HSP's gapped (non-prelim): 125 length of query: 378 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 356 effective length of database: 17,147,199,772 effective search space: 6104403118832 effective search space used: 6104403118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)