>COX12_SCHPO (O94581) Cytochrome c oxidase polypeptide VIb (EC 1.9.3.1)|
          Length = 83

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 462 TYIAYD*AVTEKGTPFYNTA-FLSLITWLCFMQ-VERWNEQWENGTFPGPL 316
           +YI Y   +  KG  F     F      LC M+ VERW+EQ ENGTFP P+
Sbjct: 33  SYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFPAPI 83

>CX6B2_MOUSE (Q80ZN9) Cytochrome c oxidase subunit VIb isoform 2 (EC 1.9.3.1)|
           (COX VIb-2) (Cytochrome c oxidase subunit VIb,
           testis-specific isoform)
          Length = 88

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 417 FYNTAFLSL--ITWLCFMQVERWNEQWENGTFPGPL 316
           +Y   F SL  I+W     V+RWNEQ + GTFPG +
Sbjct: 58  YYFRVFHSLCPISW-----VQRWNEQIKQGTFPGKI 88

>CX6B2_RAT (Q6YFQ1) Cytochrome c oxidase subunit VIb isoform 2 (EC 1.9.3.1)|
           (COX VIb-2) (Cytochrome c oxidase subunit VIb,
           testis-specific isoform)
          Length = 88

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 417 FYNTAFLSL--ITWLCFMQVERWNEQWENGTFPGPL 316
           +Y   F SL  ++W     V+RWNEQ + GTFPG +
Sbjct: 58  YYFRVFHSLCPVSW-----VQRWNEQIKQGTFPGKI 88

>AATM_YEAST (Q01802) Aspartate aminotransferase, mitochondrial precursor (EC|
           2.6.1.1) (Transaminase A)
          Length = 451

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
 Frame = +1

Query: 121 NPVNDRWEKLMGSTFSLHQVKNLFVSSPQKGKGSGEFSAQS-------NFVQSPGR*VGM 279
           +P  ++WEK++ + + L  V    V    +G  SG     +       N  + P    G+
Sbjct: 221 DPTKEQWEKIIDTIYELKMVP--IVDMAYQGLESGNLLKDAYLLRLCLNVNKYPNWSNGI 278

Query: 280 MVCLSFQRH*SLQGSRECAILPLLVPTLNLHKTQPCYQ 393
            +C SF ++  L G R  ++  +   T N  K  P  Q
Sbjct: 279 FLCQSFAKNMGLYGERVGSLSVITPATANNGKFNPLQQ 316

>ACER_DROME (Q9VLJ6) Angiotensin-converting enzyme-related protein precursor|
           (EC 3.4.15.1)
          Length = 630

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 341 RMAHSLDPCKLQWRWKDKH 285
           R++HS DP +L W W++ H
Sbjct: 161 RLSHSRDPAELAWYWREWH 179

>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex combs)|
          Length = 1368

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
 Frame = +3

Query: 78   KQQVQSNSKGGRCTKSSE*SLGETDGQHLQ--------LTSSQKLICK*SSKRKG 218
            KQ + +NS GG  T S   S G T+G  LQ         T+ +K+  K +S   G
Sbjct: 1113 KQNISANSNGGPSTTSGSNSNGTTNGDDLQNLHMLSESATAREKISIKAASSGNG 1167

>SMAL1_MOUSE (Q8BJL0) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A-like protein 1 (EC
           3.6.1.-) (Sucrose nonfermenting protein 2-like 1)
           (HepA-related protein) (mharp)
          Length = 910

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 307 SGAGRTNIPSSPPTSLVTGQSYFVPRIR 224
           S  G+T++PS+P  + VTG+   + R+R
Sbjct: 274 SVGGQTSLPSAPSLTFVTGKCMLISRVR 301

>RS2_BACSU (P21464) 30S ribosomal protein S2 (BS1) (Vegetative protein 209)|
           (VEG209)
          Length = 245

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 58  DLNRVTQNSKFSQIPKVDVVQ-NPVNDRWEKLMGSTFSLHQVKN-LFVSSPQK 210
           D+ ++ +N  F  +PK +VVQ     +R EK +G    +  + + LF+  P+K
Sbjct: 115 DIEKMQENGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRK 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,962,839
Number of Sequences: 219361
Number of extensions: 1628740
Number of successful extensions: 3489
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3489
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)