ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags10o12 |
|---|---|
| Clone Library Name | barley_pub |
>ENGD_BACSU (P37518) GTP-dependent nucleic acid-binding protein engD| Length = 366 Score = 89.4 bits (220), Expect = 2e-18 Identities = 39/59 (66%), Positives = 51/59 (86%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 AG+IHSDF++GFIRAETV+Y+D +A G + A+E G +RLEGKEY+VQ+GDV+ FRFNV Sbjct: 308 AGIIHSDFERGFIRAETVAYEDLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVIHFRFNV 366
>ENGD_PASMU (Q9CP90) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 82.0 bits (201), Expect = 3e-16 Identities = 38/59 (64%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 A VIH+DF+KGFIRAE ++YDDF+ A+E G RLEGK+YIVQ+GDVM FRFNV Sbjct: 304 AAVIHTDFEKGFIRAEVIAYDDFIQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_HAEDU (Q7VMI2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 82.0 bits (201), Expect = 3e-16 Identities = 38/59 (64%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 A VIH+DF+KGFIRAE ++YDDF+ A+E G RLEGK+YIVQ+GDVM FRFNV Sbjct: 304 AAVIHTDFEKGFIRAEVIAYDDFIQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_HAEIN (P44681) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 81.3 bits (199), Expect = 5e-16 Identities = 37/59 (62%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 A VIH+DF+KGFIRAE ++Y+DF+ A+E G RLEGK+YIVQ+GDVM FRFNV Sbjct: 304 AAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_SHIFL (P0ABU4) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 76.6 bits (187), Expect = 1e-14 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 AG IH+DF+KGFIRA+T+S++DF+ A+E G MR EGK+YIV++GDVM F FNV Sbjct: 304 AGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECOLI (P0ABU2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 76.6 bits (187), Expect = 1e-14 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 AG IH+DF+KGFIRA+T+S++DF+ A+E G MR EGK+YIV++GDVM F FNV Sbjct: 304 AGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECO57 (P0ABU3) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 76.6 bits (187), Expect = 1e-14 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 AG IH+DF+KGFIRA+T+S++DF+ A+E G MR EGK+YIV++GDVM F FNV Sbjct: 304 AGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>Y024_MYCGE (P47270) Probable GTP-binding protein MG024| Length = 367 Score = 74.3 bits (181), Expect = 6e-14 Identities = 33/59 (55%), Positives = 46/59 (77%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 AG IHSDF+KGFI+ E +S+D A SL A+++GL+RLEGK Y++++GDV F+FNV Sbjct: 308 AGQIHSDFEKGFIKVEVISWDQLFAMKSLQEAKKQGLIRLEGKNYLIKDGDVCNFKFNV 366
>PTD4_HUMAN (Q9NTK5) Putative GTP-binding protein PTD004| Length = 396 Score = 70.1 bits (170), Expect = 1e-12 Identities = 31/62 (50%), Positives = 43/62 (69%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV* 209 AG IH+DF+KGFI AE + Y+DF GS A + G R +G+ YIV++GD++ F+FN Sbjct: 331 AGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTP 390 Query: 208 QQ 203 QQ Sbjct: 391 QQ 392
>PTD4_MOUSE (Q9CZ30) Putative GTP-binding protein PTD004 homolog| Length = 396 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/62 (50%), Positives = 43/62 (69%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV* 209 AG IH+DF+KGFI AE + Y+DF GS A + G R +G+ YIV++GD++ F+FN Sbjct: 331 AGKIHTDFEKGFIMAEVMKYEDFKDEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTP 390 Query: 208 QQ 203 QQ Sbjct: 391 QQ 392
>ENGD_BUCAI (P57288) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 65.1 bits (157), Expect = 4e-11 Identities = 29/56 (51%), Positives = 38/56 (67%) Frame = -2 Query: 379 IHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 IHSDF KGFIRA+ + Y DF+ S +E G R EGK+Y +Q+GD++ F FNV Sbjct: 306 IHSDFSKGFIRAQIIKYVDFITYKSEAKIKEMGKFRTEGKQYYIQDGDIIHFLFNV 361
>YCHF_CAEEL (P91917) Putative GTP-binding protein W08E3.3| Length = 395 Score = 60.8 bits (146), Expect = 7e-10 Identities = 28/58 (48%), Positives = 37/58 (63%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFN 215 AG IH+DF+KGFI AE + D + G + G R +GK YIVQ+GDV+ F+FN Sbjct: 328 AGRIHTDFEKGFIMAEVMKVADLIELGDEAKCKAGGKYRQQGKTYIVQDGDVIFFKFN 385
>ENGD_BUCAP (Q8K9V2) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/59 (49%), Positives = 40/59 (67%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 A IHSDF++GFIRA+ ++Y DF+ S +E G R EGK Y +Q+GD++ F FNV Sbjct: 303 ADKIHSDFRRGFIRAQIINYLDFIKYKSETKVKEAGKYRSEGKFYQIQDGDIINFLFNV 361
>ENGD_BUCBP (Q89AR6) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 60.1 bits (144), Expect = 1e-09 Identities = 25/56 (44%), Positives = 39/56 (69%) Frame = -2 Query: 379 IHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 IH+D KGFIRA+ +SYDDF+ ++E G +R+EGK Y++ +GD++ +NV Sbjct: 307 IHTDLSKGFIRAQVISYDDFIKYKGEKRSKELGKIRIEGKRYVICDGDIIHVLYNV 362
>YEAD_SCHPO (O14078) Hypothetical GTP-binding protein UNK4.13c in chromosome I| Length = 407 Score = 52.8 bits (125), Expect = 2e-07 Identities = 21/56 (37%), Positives = 36/56 (64%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFR 221 AG+IHSDF+K F+ E + + DF S+ A + G + +GK+Y V+ GD++ ++ Sbjct: 349 AGIIHSDFKKKFVAGEVIKFSDFEKYKSVDACKSVGKCKTKGKDYTVEPGDIIFWK 404
>YLF2_YEAST (P38746) Putative GTP-binding protein YLF2| Length = 405 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAG---SLGAAREKGLMRLEGKEYIVQEGDVMLFR 221 AGVIHSD ++ FI A+ + YDD + + KGL++ GK+YI+Q+ D+ LF+ Sbjct: 339 AGVIHSDLRETFISADVIKYDDLKKMEPPLNESLLKSKGLIKRAGKQYIMQDNDIALFK 397
>YBN5_YEAST (P38219) Putative GTP-binding protein YBR025C| Length = 394 Score = 45.1 bits (105), Expect = 4e-05 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFR 221 AGVIH+D FI A+ + +D A + G + +GK+Y+V++GD++ FR Sbjct: 333 AGVIHNDLMNTFILAQVMKCEDVFEYKDDSAIKAAGKLMQKGKDYVVEDGDIIYFR 388
>Y026_MYCPN (P75088) Probable GTP-binding protein MG024 homolog (B01_orf362)| Length = 362 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/43 (44%), Positives = 31/43 (72%) Frame = -2 Query: 388 AGVIHSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGK 260 AG IH+DF++GFI+ E +S++ SL A+++GL+RL G+ Sbjct: 308 AGEIHTDFERGFIKVEVISWNQLYELKSLQEAKKQGLVRLRGQ 350
>LRP2_RAT (P98158) Low-density lipoprotein receptor-related protein 2 precursor| (Megalin) (Glycoprotein 330) (gp330) Length = 4660 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -1 Query: 338 CILR*FCCGGFSWSSKGEGTDEVGREGIYCAGRRCHALPIQCVTTVPC 195 C+ R F C G + G+G+DE IYCA C + QC++ C Sbjct: 2836 CVPRAFLCDGDN--DCGDGSDE---NPIYCASHTCRSNEFQCLSPQRC 2878
>SYI_PSEAE (Q9HVM4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQ-CVTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ V T K A R Y A Q G+ +DF+ Sbjct: 86 GYDAPYVPGWDCHGLPIEHKVETTHGKNLPADKTRELCREYAAEQIEGQKADFI 139
>SYI_THIDA (Q3SHS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 929 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 24/87 (27%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQCVTT------VPCKKFQALFNSNFVRTYKARQ---------- 138 G + Y G CH LPI+ +P KF+ L R Y A Q Sbjct: 86 GFDAPYVPGWDCHGLPIELQVEKTHGKDIPPAKFREL-----CRAYAAEQIERQKADFIR 140 Query: 137 --------NLGRPSDFVFEASTVHVLG 81 N R DF FEA T+ VLG Sbjct: 141 LGVLGDWSNPYRTMDFQFEADTLRVLG 167
>Y065_WIGBR (Q8D3D6) UPF0176 protein WIGBR0650| Length = 315 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 257 IYCAGRRCHALPIQCVTTVPCKKFQALFNSNFVRTYKARQN 135 I C ++C++L IQC+ C K F SNF Y +N Sbjct: 278 INCKNKKCNSLFIQCIY---CNKTLNEFCSNFCNEYYQSKN 315
>GLT12_HUMAN (Q8IXK2) Polypeptide N-acetylgalactosaminyltransferase 12 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 12) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 12) (Polypeptide GalNAc transferase 12) (GalNAc-T12) (pp-GaNTas Length = 581 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -2 Query: 349 RAETVSYDDFVAAGSLGAAREKGLMRLEGKEYIVQEGDVMLFRFNV 212 R E V V A +LGA E ++L+G+E +QE V L + N+ Sbjct: 60 RREPVMPRPPVPANALGARGEAVRLQLQGEELRLQEESVRLHQINI 105
>MURE_CHLTR (O84271) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 483 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 202 YHARSFKLYSTQISYELTRQGKIWVDHQILSLRHQLFMYSASL 74 Y A KLYS+ SY++ QG+++ L H ++ ASL Sbjct: 262 YRADRLKLYSSGSSYDIWYQGQVFPCETSLIGEHNVYNVLASL 304
>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein tyrosine phosphatase-NP) (PTP-NP) Length = 1001 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 201 YCCHTLNRKSMTSPSCTIYSFPSNLISPFSLAAPRE 308 Y HT ++T P T +P NL+ PFS P E Sbjct: 192 YVAHT---SALTYPPATRAKYPDNLLRPFSRLQPDE 224
>IF3I_HUMAN (Q9Y262) Eukaryotic translation initiation factor 3 subunit| 6-interacting protein Length = 564 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -2 Query: 238 DVMLFRFNV*QQYHARSFKLYSTQISYELTRQGKIWVDHQILSLRHQL 95 D +++F QY ++ K +I + L KIW H +L++ H L Sbjct: 188 DEFIYQFQSFSQYRCKTAKKSEEEIDF-LRSNPKIWNVHSVLNVLHSL 234
>IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)| Length = 236 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Frame = -1 Query: 308 FSWS-----SKGEGTDEVGREGIYCAGRRCHALPIQCVTT 204 F W+ S+ D + R G YC G+R + VTT Sbjct: 92 FKWARRQFGSRAREVDMLSRRGFYCVGKRLRCAGCKVVTT 131
>GAL1_VIBVY (Q7MI80) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 386 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 376 HSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEY--IVQEGDV 233 H+D+ GF+ ++Y VAA A RE L+R+ +Y V E D+ Sbjct: 36 HTDYNDGFVLPCAINYQTVVAA----AKREDNLVRVVSVDYGNAVDEFDI 81
>SYI_PHOLL (Q7N8X2) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 937 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQC----VTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ + P +KF A R Y Q G+ DF+ Sbjct: 86 GYDSPYIPGWDCHGLPIELKVEQIIGKPGEKFSAAEFRAECRKYAKEQIEGQKKDFI 142
>SYI_HAEIN (P43824) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 941 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = -1 Query: 272 VGREGIYCAGRRCHALPIQC----VTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 +G + Y G CH LPI+ + P +K A R Y A Q G+ DF+ Sbjct: 86 LGFDSPYIPGWDCHGLPIELKVEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFI 143
>SYI_PSESM (Q889E4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQ-CVTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ V K A R Y A Q G+ S+F+ Sbjct: 86 GFDAPYVPGWDCHGLPIEHKVEVTHGKNLSADRTRELCRAYAAEQIEGQKSEFI 139
>LX12B_MOUSE (O70582) Arachidonate 12-lipoxygenase, 12R type (EC 1.13.11.-)| (Epidermis-type lipoxygenase 12) (12R-lipoxygenase) (12R-LOX) (Epidermis-type lipoxygenase 2) (e-LOX 2) Length = 701 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = +3 Query: 198 WYCCHTLNRKSMTSPSCTIYSFPS-NLISPFSLAAPREPAATKSS*DTVSALMK 356 WYC N + +P C +Y FP+ + + A RE ++ DT+ L++ Sbjct: 82 WYC----NYVQICAPDCRVYHFPAYQWMDGYETLALREATGKITADDTLPILLE 131
>ARAC_ECOLI (P0A9E0) Arabinose operon regulatory protein| Length = 292 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -2 Query: 358 GFIRAETVSYDDFVAAGSLG--------AAREKGLMRLEGKEYIVQEGDVMLF 224 G E Y DF LG R +G+++ +G+E++ + GD++LF Sbjct: 22 GLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLF 74
>ARAC_ECO57 (P0A9E1) Arabinose operon regulatory protein| Length = 292 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -2 Query: 358 GFIRAETVSYDDFVAAGSLG--------AAREKGLMRLEGKEYIVQEGDVMLF 224 G E Y DF LG R +G+++ +G+E++ + GD++LF Sbjct: 22 GLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLF 74
>FTN1_HAEIN (P43707) Ferritin-like protein 1 (EC 1.16.3.1)| Length = 162 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +2 Query: 185 ETSCMVLLSHIESEEHDISFLHNIFLPFQPHQSLLPCCSKRTRRNKIIVRYSFSSNE 355 ETS M +L I++ +HD S L +F H+ L+ T + +V +F S + Sbjct: 63 ETSGMPILGKIDAPKHDYSSLREVFEITLEHEKLV------TSKINELVEVTFESKD 113
>SYI_YERPS (Q66ES4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 938 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQC----VTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ + P +K A R Y A Q G+ DF+ Sbjct: 86 GYDSPYIPGWDCHGLPIELKVEQLIGKPGEKVSAAEFRTACRKYAAEQVEGQKKDFI 142
>SYI_YERPE (Q8ZIM0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 938 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQC----VTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ + P +K A R Y A Q G+ DF+ Sbjct: 86 GYDSPYIPGWDCHGLPIELKVEQLIGKPGEKVSAAEFRTACRKYAAEQVEGQKKDFI 142
>GAL1_VIBCH (Q9KRP1) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 386 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -2 Query: 376 HSDFQKGFIRAETVSYDDFVAAGSLGAAREKGLMRLEGKEY 254 H+D+ GF+ ++Y VAA A RE L+RL +Y Sbjct: 36 HTDYNDGFVLPCAINYQTVVAA----AKREDFLVRLVAVDY 72
>SYI_ERWCT (Q6D0C3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 937 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Frame = -1 Query: 269 GREGIYCAGRRCHALPIQC----VTTVPCKKFQALFNSNFVRTYKARQNLGRPSDFV 111 G + Y G CH LPI+ + P +K A R Y A Q G+ +DF+ Sbjct: 86 GYDSPYVPGWDCHGLPIELKVEQLIGKPGEKVSAAEFRAECRKYAAEQVAGQKADFI 142
>PALA_CANAL (Q9UW12) pH-response regulator protein palA/RIM20| Length = 785 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -2 Query: 259 EYIVQEGDVMLFRFNV*QQYHARSFKLYSTQISY-ELTRQGKIWVDHQILSLRHQLFMYS 83 +Y + G+ F FN + + + KL+ + I Y TR ++ ++H+I S+ + Sbjct: 610 KYQTENGE---FNFNAFESVYEKHMKLFDSDIKYIARTRDSQMTLEHEIDSINQKFVQEF 666 Query: 82 ASL 74 SL Sbjct: 667 KSL 669
>PVG3_SCHPO (Q9USX0) Beta-1,3-galactosyltransferase pvg3 (EC 2.4.1.134)| (Pyruvylated Gal-beta-1,3-epitope synthesis protein 3) (PvGal synthesis protein 3) Length = 378 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 16/78 (20%) Frame = +2 Query: 200 VLLSHIESEEHDISFLHNIFL----------------PFQPHQSLLPCCSKRTRRNKIIV 331 ++L+ +++EEH ++++ N+FL PF+ + + RRN + Sbjct: 26 LVLNRLQAEEHSLAYVENLFLDPFIKQNESLAHANDRPFKLYLGIFSQAKNVDRRNFLRT 85 Query: 332 RYSFSSNEAFLEVAMNNS 385 Y NE E A+N++ Sbjct: 86 DY----NEYIKEFAVNDT 99
>Y742_CHLTR (P55137) Hypothetical RNA methyltransferase CT_742 (EC 2.1.1.-)| (Protein HOM1) Length = 396 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = +2 Query: 245 LHNIFLPFQPHQSLLPC--CSKRTR-RNKI 325 LHN+F P P Q++LP CS R RNK+ Sbjct: 35 LHNLFAPLIPSQNILPVIPCSPLLRGRNKM 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,529,964 Number of Sequences: 219361 Number of extensions: 1020870 Number of successful extensions: 2688 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2656 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2686 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
