ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags11d10 |
|---|---|
| Clone Library Name | barley_pub |
>PHB2_RAT (Q5XIH7) Prohibitin-2 (B-cell receptor-associated protein BAP37)| (BAP-37) Length = 299 Score = 176 bits (445), Expect = 7e-44 Identities = 84/146 (57%), Positives = 123/146 (84%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERAK+F++ LDDV+IT Sbjct: 127 DYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITE 186 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 LSF +E+T A+EAKQVA QEA+RA+F+VEKA+Q+++ I++A+GEA++A+++G A++ NP Sbjct: 187 LSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNP 246 Query: 288 AFVALRQIEAAREIAHTIAVSNNKVF 211 ++ LR+I AA+ I+ TIA S N+++ Sbjct: 247 GYIKLRKIRAAQNISKTIATSQNRIY 272
>PHB2_MOUSE (O35129) Prohibitin-2 (B-cell receptor-associated protein BAP37)| (Repressor of estrogen receptor activity) Length = 299 Score = 176 bits (445), Expect = 7e-44 Identities = 84/146 (57%), Positives = 123/146 (84%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERAK+F++ LDDV+IT Sbjct: 127 DYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITE 186 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 LSF +E+T A+EAKQVA QEA+RA+F+VEKA+Q+++ I++A+GEA++A+++G A++ NP Sbjct: 187 LSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNP 246 Query: 288 AFVALRQIEAAREIAHTIAVSNNKVF 211 ++ LR+I AA+ I+ TIA S N+++ Sbjct: 247 GYIKLRKIRAAQNISKTIATSQNRIY 272
>PHB2_HUMAN (Q99623) Prohibitin-2 (B-cell receptor-associated protein BAP37)| (Repressor of estrogen receptor activity) (D-prohibitin) Length = 299 Score = 176 bits (445), Expect = 7e-44 Identities = 84/146 (57%), Positives = 123/146 (84%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERAK+F++ LDDV+IT Sbjct: 127 DYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITE 186 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 LSF +E+T A+EAKQVA QEA+RA+F+VEKA+Q+++ I++A+GEA++A+++G A++ NP Sbjct: 187 LSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNP 246 Query: 288 AFVALRQIEAAREIAHTIAVSNNKVF 211 ++ LR+I AA+ I+ TIA S N+++ Sbjct: 247 GYIKLRKIRAAQNISKTIATSQNRIY 272
>PHB2_YEAST (P50085) Prohibitin-2| Length = 315 Score = 175 bits (443), Expect = 1e-43 Identities = 89/145 (61%), Positives = 117/145 (80%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI++E LKAVVAQ+NASQLITQRE VSR IR+ L RA FNI LDDVSIT Sbjct: 144 DYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILLDDVSITY 203 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 ++F EFT+A+EAKQ+A Q+A+RA F+V+KA Q+K+ ++RAQGEAKSAELIG AI + Sbjct: 204 MTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQGMVVRAQGEAKSAELIGEAIKKSR 263 Query: 288 AFVALRQIEAAREIAHTIAVSNNKV 214 +V L++++ AR+IA +A S N+V Sbjct: 264 DYVELKRLDTARDIAKILASSPNRV 288
>PHB2_CAEEL (P50093) Mitochondrial prohibitin complex protein 2 (Prohibitin-2)| Length = 286 Score = 168 bits (425), Expect = 1e-41 Identities = 84/146 (57%), Positives = 116/146 (79%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 N+ ERVLPSI +E LK VVA++NASQLITQR+ VS +RK L ERA +FNI LDDVS+T Sbjct: 118 NWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRKTLIERALDFNIILDDVSLTE 177 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 L+F +++ A+EAKQVAAQEA+RA F VE+A+Q K+ I++A+GEA+SA+L+G A+ N+P Sbjct: 178 LAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQAEGEAESAKLLGEAMKNDP 237 Query: 288 AFVALRQIEAAREIAHTIAVSNNKVF 211 F+ LR+I AA++IA ++ S NK + Sbjct: 238 GFLKLRKIRAAQKIARIVSESGNKTY 263
>PHB_RAT (P67779) Prohibitin| Length = 272 Score = 166 bits (421), Expect = 4e-41 Identities = 86/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LK+VVA+++A +LITQRE VSR++ LTERA F + LDDVS+T Sbjct: 113 DYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+AII A+G++K+AELI N++A Sbjct: 173 LTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNN 220 + LR++EAA +IA+ ++ S N Sbjct: 233 DGLIELRKLEAAEDIAYQLSRSRN 256
>PHB_MOUSE (P67778) Prohibitin (B-cell receptor-associated protein 32) (BAP| 32) Length = 272 Score = 166 bits (421), Expect = 4e-41 Identities = 86/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LK+VVA+++A +LITQRE VSR++ LTERA F + LDDVS+T Sbjct: 113 DYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+AII A+G++K+AELI N++A Sbjct: 173 LTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNN 220 + LR++EAA +IA+ ++ S N Sbjct: 233 DGLIELRKLEAAEDIAYQLSRSRN 256
>PHB_HUMAN (P35232) Prohibitin| Length = 272 Score = 166 bits (421), Expect = 4e-41 Identities = 86/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LK+VVA+++A +LITQRE VSR++ LTERA F + LDDVS+T Sbjct: 113 DYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+AII A+G++K+AELI N++A Sbjct: 173 LTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNN 220 + LR++EAA +IA+ ++ S N Sbjct: 233 DGLIELRKLEAAEDIAYQLSRSRN 256
>PHB_BOVIN (Q3T165) Prohibitin| Length = 272 Score = 166 bits (421), Expect = 4e-41 Identities = 86/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LK+VVA+++A +LITQRE VSR++ LTERA F + LDDVS+T Sbjct: 113 DYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+AII A+G++K+AELI N++A Sbjct: 173 LTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNN 220 + LR++EAA +IA+ ++ S N Sbjct: 233 DGLIELRKLEAAEDIAYQLSRSRN 256
>PHB_CHICK (P84173) Prohibitin| Length = 272 Score = 165 bits (418), Expect = 9e-41 Identities = 85/144 (59%), Positives = 115/144 (79%), Gaps = 1/144 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LK+VVA+++A +LITQRE VSR++ + LTERA F + LDDVS+T Sbjct: 113 DYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FGKEFT A+E KQVA QEAERA+FIVEKAEQ KK+A+I A+G++K+AELI N++A Sbjct: 173 LTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNN 220 + LR++EAA +IA+ ++ S N Sbjct: 233 DGLIELRKLEAAEDIAYQLSRSRN 256
>PHB1_YEAST (P40961) Prohibitin-1| Length = 287 Score = 162 bits (411), Expect = 6e-40 Identities = 81/147 (55%), Positives = 120/147 (81%), Gaps = 1/147 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI +E LK++VAQ++A++LITQRE +S++IRK L+ RA F I L+DVSIT Sbjct: 115 DYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITH 174 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 ++FG EFT A+E KQ+A Q+AERAKF+VEKAEQ++++++IRA+GEA+SAE I A+A Sbjct: 175 MTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAKVG 234 Query: 291 PAFVALRQIEAAREIAHTIAVSNNKVF 211 + +R++EA+++IA T+A S+N V+ Sbjct: 235 DGLLLIRRLEASKDIAQTLANSSNVVY 261
>L2CC_DROME (P24156) Protein l(2)37Cc| Length = 276 Score = 148 bits (373), Expect = 2e-35 Identities = 78/147 (53%), Positives = 108/147 (73%), Gaps = 1/147 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y+ERVLPSI E LKAVVAQ++A +LITQRE VS+ + + LT RAK F LDD+S+T Sbjct: 113 DYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQFGFILDDISLTH 172 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FG+EFT A+E KQVA QEAE+A+F+VEKAEQ K ++II A+G+A++A L+ + Sbjct: 173 LTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEGDAEAAGLLAKSFGEAG 232 Query: 291 PAFVALRQIEAAREIAHTIAVSNNKVF 211 V LR+IEAA +IA+ ++ S + Sbjct: 233 DGLVELRRIEAAEDIAYQLSRSRGVAY 259
>PHB1_CAEEL (Q9BKU4) Mitochondrial prohibitin complex protein 1 (Prohibitin-1)| Length = 275 Score = 147 bits (372), Expect = 2e-35 Identities = 78/147 (53%), Positives = 108/147 (73%), Gaps = 1/147 (0%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 +Y ERVLPSI +E LKAVVAQ++A ++ITQRE VS+ L ERA F + LDD++IT Sbjct: 116 DYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVALRERAAQFGLLLDDIAITH 175 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN-N 292 L+FG+EFT A+E KQVA QEAE+A+++VEKAEQ K +A+ A+G+A++A+L+ A A+ Sbjct: 176 LNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIAAVTTAEGDAQAAKLLAKAFASAG 235 Query: 291 PAFVALRQIEAAREIAHTIAVSNNKVF 211 V LR+IEAA EIA +A + N + Sbjct: 236 DGLVELRKIEAAEEIAERMAKNKNVTY 262
>UNC1_CAEEL (Q21190) Uncoordinated protein 1 (Protein unc-1)| Length = 285 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/122 (26%), Positives = 62/122 (50%) Frame = -3 Query: 609 TLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEA 430 TL+ + ++++T+REA+++ IL E +++ + ++ V + + ++ T A+ A Sbjct: 151 TLRNALGMKTLTEMLTEREAIAQLCETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAA 210 Query: 429 KQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNPAFVALRQIEAARE 250 + AA+EA RAK + + EQ A+ A + I NP + LR ++A Sbjct: 211 EAEAAREA-RAKVVAAEGEQKASRALKEA----------ADVIQANPVALQLRHLQALNS 259 Query: 249 IA 244 IA Sbjct: 260 IA 261
>YR614_MIMIV (Q5UP73) Hypothetical band 7 family protein R614| Length = 303 Score = 48.5 bits (114), Expect = 2e-05 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%) Frame = -3 Query: 639 ERVLPSII---HETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 + V+ SII + TL+ V+ +T+R+ ++ I+ I++E + I + + IT Sbjct: 150 DNVVQSIIELSYATLRNVIGNSTLEVCLTRRDKIAESIKSIVSEATNGWGIEIKSIQITD 209 Query: 468 LSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNP 289 + + +++ + VA ++AE + II AQG KSAEL+ A Sbjct: 210 IVVPTDIINSLSSAIVAERQAE--------------AKIILAQGNVKSAELMRQAADMLD 255 Query: 288 AFVALRQIEAAREIAHTIAVSNN 220 + VA++ + E+ +A SNN Sbjct: 256 SKVAMQ--VRSLEVIDKLATSNN 276
>Y692_METTH (O26788) Hypothetical protein MTH692| Length = 318 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/135 (21%), Positives = 67/135 (49%), Gaps = 9/135 (6%) Frame = -3 Query: 636 RVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSFG 457 + + + L+ ++ Q +T RE ++ ++R++L E + + V I + Sbjct: 104 QAITKLAQTNLRNIIGDLELDQTLTSREMINTQLREVLDEATDKWGTRVVRVEIQRIEPP 163 Query: 456 KEFTHAIEAKQVAAQEAERAKFI---------VEKAEQDKKSAIIRAQGEAKSAELIGNA 304 + A+ +KQ+ A+ +RA + +++AE DK++AI+ A+G+A++ + + +A Sbjct: 164 GDIVEAM-SKQMKAERMKRAAILEAEGYKQSEIKRAEGDKQAAILEAEGKAEAIKKVADA 222 Query: 303 IANNPAFVALRQIEA 259 +A Q +A Sbjct: 223 NKYREIAIAEGQAKA 237
>Y1420_ARCFU (O28852) Hypothetical protein AF1420| Length = 249 Score = 47.0 bits (110), Expect = 5e-05 Identities = 29/125 (23%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Frame = -3 Query: 609 TLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEA 430 TL++++ Q +++++R+ ++ ++++I+ E + I + V I + +E Sbjct: 114 TLRSIIGQAELDEVLSERDKLNVKLQQIIDEETNPWGIKVTAVEIKDVELPEEM------ 167 Query: 429 KQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNA---IANNPAFVALRQIEA 259 +++ A +AE AE++++S IIRA+GE ++A + A +A + + LR ++ Sbjct: 168 RRIMAMQAE--------AERERRSKIIRAEGEYQAAMKLREAADVLAQSEGAILLRYLQT 219 Query: 258 AREIA 244 EI+ Sbjct: 220 LNEIS 224
>YBBK_SHIFL (P0AA56) Hypothetical protein ybbK| Length = 305 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 32/174 (18%) Frame = -3 Query: 639 ERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSF 460 E + ++ ++ V+ ++++QR++++ + +I+ E + I + + I + Sbjct: 105 ELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRP 164 Query: 459 GKEFTHAIEAKQVAAQEAERAKFI---------VEKAEQDKKSAIIRAQGEAKSA----- 322 E ++ A Q+ A+ +RA + + KAE +K+S I++A+GE +SA Sbjct: 165 PAELISSMNA-QMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAE 223 Query: 321 -------------ELIGNAIANNPA-----FVALRQIEAAREIAHTIAVSNNKV 214 +++ AIA+ FVA + EA ++I + SN+KV Sbjct: 224 ARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSS---SNSKV 274
>YBBK_ECOLI (P0AA53) Hypothetical protein ybbK| Length = 305 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 32/174 (18%) Frame = -3 Query: 639 ERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSF 460 E + ++ ++ V+ ++++QR++++ + +I+ E + I + + I + Sbjct: 105 ELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRP 164 Query: 459 GKEFTHAIEAKQVAAQEAERAKFI---------VEKAEQDKKSAIIRAQGEAKSA----- 322 E ++ A Q+ A+ +RA + + KAE +K+S I++A+GE +SA Sbjct: 165 PAELISSMNA-QMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAE 223 Query: 321 -------------ELIGNAIANNPA-----FVALRQIEAAREIAHTIAVSNNKV 214 +++ AIA+ FVA + EA ++I + SN+KV Sbjct: 224 ARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSS---SNSKV 274
>YBBK_ECOL6 (P0AA54) Hypothetical protein ybbK| Length = 305 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 32/174 (18%) Frame = -3 Query: 639 ERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSF 460 E + ++ ++ V+ ++++QR++++ + +I+ E + I + + I + Sbjct: 105 ELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRP 164 Query: 459 GKEFTHAIEAKQVAAQEAERAKFI---------VEKAEQDKKSAIIRAQGEAKSA----- 322 E ++ A Q+ A+ +RA + + KAE +K+S I++A+GE +SA Sbjct: 165 PAELISSMNA-QMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAE 223 Query: 321 -------------ELIGNAIANNPA-----FVALRQIEAAREIAHTIAVSNNKV 214 +++ AIA+ FVA + EA ++I + SN+KV Sbjct: 224 ARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSS---SNSKV 274
>YBBK_ECO57 (P0AA55) Hypothetical protein ybbK| Length = 305 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 32/174 (18%) Frame = -3 Query: 639 ERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSF 460 E + ++ ++ V+ ++++QR++++ + +I+ E + I + + I + Sbjct: 105 ELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRP 164 Query: 459 GKEFTHAIEAKQVAAQEAERAKFI---------VEKAEQDKKSAIIRAQGEAKSA----- 322 E ++ A Q+ A+ +RA + + KAE +K+S I++A+GE +SA Sbjct: 165 PAELISSMNA-QMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAE 223 Query: 321 -------------ELIGNAIANNPA-----FVALRQIEAAREIAHTIAVSNNKV 214 +++ AIA+ FVA + EA ++I + SN+KV Sbjct: 224 ARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSS---SNSKV 274
>Y827_METJA (Q58237) Hypothetical protein MJ0827| Length = 199 Score = 37.7 bits (86), Expect = 0.030 Identities = 23/102 (22%), Positives = 50/102 (49%) Frame = -3 Query: 639 ERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSF 460 E + ++ TL+A++ +++ +RE ++ ++ +IL + + ++ V + Sbjct: 109 EYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEV----- 163 Query: 459 GKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGE 334 KE + K AQ+ KAE+ K++AI+ A+GE Sbjct: 164 -KEIDPPEDIKNAMAQQM--------KAERLKRAAILEAEGE 196
>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle| Length = 1938 Score = 37.4 bits (85), Expect = 0.039 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%) Frame = -3 Query: 540 EIRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEAKQVAAQEAE---------RAKFI 388 ++RK L + K F I LD+ +SL GK+ +E++ V EAE + Sbjct: 1778 KVRKNLESQVKEFQIRLDEAEASSLKGGKKMIQKLESR-VHELEAELDNEQRRHAETQKN 1836 Query: 387 VEKAEQDKKSAIIRAQGEAKSAELIGNAIANNPAFVAL--RQIEAAREIA 244 + KA++ K +A + K+ E + I A + RQ+E A EIA Sbjct: 1837 MRKADRRLKELAFQADEDRKNQERLQELIDKLNAKIKTFKRQVEEAEEIA 1886
>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1748 Score = 34.7 bits (78), Expect = 0.25 Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 9/104 (8%) Frame = -1 Query: 293 TLLSSHSGRL--KPPGRSPTPSQSPTTRCSWTQAXXXXXXXXXXXXXXXXRNETVSCHAR 120 +L S HSGR +PP RS S+SP R + E +S Sbjct: 294 SLASDHSGRSHDRPPRRSR--SRSPDQRSEPSDHSRHSPQQPSNGSLRSRDEERISKPGA 351 Query: 119 CGY-------HRPVSIEESTFERNERLVSGIPNPKTRRPCYCEL 9 H P ++EE T ERNE+ +P PK P Y ++ Sbjct: 352 VSTPVKHADDHTPKTVEEVTVERNEKQTPSLPEPK---PVYAQV 392
>HFLC_TREPA (O83152) Protein hflC (EC 3.4.-.-)| Length = 331 Score = 33.9 bits (76), Expect = 0.43 Identities = 23/102 (22%), Positives = 46/102 (45%) Frame = -3 Query: 558 REAVSREIRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEK 379 RE+++REI + ++ K+F I + DV + + E ++ + V Sbjct: 187 RESLAREISQAANDQLKDFGIVVVDVIFKGIKYSDELQASVFNRMV-------------- 232 Query: 378 AEQDKKSAIIRAQGEAKSAELIGNAIANNPAFVALRQIEAAR 253 E+++ + + R+ GE K AE +G + ++ EA R Sbjct: 233 KERNQIAQMFRSTGEGKKAEWLGKLDNEKRSLLSKAYEEAER 274
>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 9/104 (8%) Frame = -1 Query: 293 TLLSSHSGRL--KPPGRSPTPSQSPTTRCSWTQAXXXXXXXXXXXXXXXXRNETVSCHAR 120 +L S HSGR +PP RS S+SP R + E +S Sbjct: 294 SLASDHSGRSHDRPPRRSQ--SRSPDQRSEPSDHSTQSPQQPSNGSLRSREEERMSKPGA 351 Query: 119 CGY-------HRPVSIEESTFERNERLVSGIPNPKTRRPCYCEL 9 H P ++EE T E+NE+ +P PK P Y ++ Sbjct: 352 ISTPVKHVDDHPPKAVEEVTVEKNEKQTPTLPEPK---PVYAQV 392
>ATKB_ANASL (Q9R6X1) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 701 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Frame = -3 Query: 423 VAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNPAF------VALRQ-I 265 V AQEA FI E +DK S I R Q + K + G+ + PA VA+ Sbjct: 501 VIAQEAGVDDFIAEATPEDKISVIQREQAQGKLVAMTGDGTNDAPALAQANVGVAMNTGT 560 Query: 264 EAAREIAHTIAVSNN 220 +AA+E A+ + + ++ Sbjct: 561 QAAKEAANMVDLDSD 575
>ATKB1_ANASP (Q8YPE9) Potassium-transporting ATPase B chain 1 (EC 3.6.3.12)| (Potassium-translocating ATPase B chain 1) (ATP phosphohydrolase [potassium-transporting] B chain 1) (Potassium-binding and translocating subunit B 1) Length = 701 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Frame = -3 Query: 423 VAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIANNPAF------VALRQ-I 265 V AQEA FI E +DK S I R Q + K + G+ + PA VA+ Sbjct: 501 VIAQEAGVDDFIAEATPEDKISVIQREQAQGKLVAMTGDGTNDAPALAQANVGVAMNTGT 560 Query: 264 EAAREIAHTIAVSNN 220 +AA+E A+ + + ++ Sbjct: 561 QAAKEAANMVDLDSD 575
>HFLC_HAEIN (P44545) Protein hflC (EC 3.4.-.-)| Length = 295 Score = 31.6 bits (70), Expect = 2.1 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 18/138 (13%) Frame = -3 Query: 642 NERVLPSIIHETLKAVVAQYNASQLITQREAVSR------EIR-KILTERAKNFNIALDD 484 N+R+ I T+K +V+ + ++A+S E+ +++ R K N+ D+ Sbjct: 124 NDRLRSEIGSRTIKDIVSGTRGELMEGAKKALSSGQDSTAELGIEVIDVRVKQINLP-DE 182 Query: 483 VSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAII-----------RAQG 337 VS + + A+ A++ +Q E+A FI +A+ D+K +I R G Sbjct: 183 VSSSIYQRMRAERDAV-AREHRSQGKEKAAFI--QADVDRKVTLILANANKTAQELRGSG 239 Query: 336 EAKSAELIGNAIANNPAF 283 +A +A+L +A A P F Sbjct: 240 DAAAAKLYSDAFAQEPQF 257
>TRUB_STRPM (Q48TB3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 498 IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKK 361 + +DD +T +SFG+ + + +AA E+ I+EK +Q+ K Sbjct: 243 MVIDDTELTEISFGRRLSLPSQEPLLAAFHGEKVIAILEKRDQEYK 288
>TRUB_STRP8 (P65859) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 498 IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKK 361 + +DD +T +SFG+ + + +AA E+ I+EK +Q+ K Sbjct: 243 MVIDDTELTEISFGRRLSLPSQEPLLAAFHGEKVIAILEKRDQEYK 288
>TRUB_STRP6 (Q5XBX7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 498 IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKK 361 + +DD +T +SFG+ + + +AA E+ I+EK +Q+ K Sbjct: 243 MVIDDTELTEISFGRRLSLPSQEPLLAAFHGEKVIAILEKRDQEYK 288
>TRUB_STRP3 (Q8K7B8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 498 IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKK 361 + +DD +T +SFG+ + + +AA E+ I+EK +Q+ K Sbjct: 243 MVIDDTELTEISFGRRLSLPSQEPLLAAFHGEKVIAILEKRDQEYK 288
>TRUB_STRP1 (P65858) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 498 IALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKAEQDKK 361 + +DD +T +SFG+ + + +AA E+ I+EK +Q+ K Sbjct: 243 MVIDDTELTEISFGRRLSLPSQEPLLAAFHGEKVIAILEKRDQEYK 288
>TOLA_ECOLI (P19934) Protein tolA| Length = 421 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -3 Query: 441 AIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAE 319 A EA + A EAE+ K EKA DKK+A +A + K+AE Sbjct: 212 ATEAAEKAKAEAEK-KAAAEKAAADKKAAAEKAAADKKAAE 251
>MYSA_DROME (P05661) Myosin heavy chain, muscle| Length = 1962 Score = 30.8 bits (68), Expect = 3.6 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 19/139 (13%) Frame = -3 Query: 603 KAVVAQYNASQLITQREA------VSREIRKILTERAKNFNIALDDVSITSLSFGKEFTH 442 KA A +A++L + A ++RK L ++ K + LD+ +L GK+ Sbjct: 1753 KAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKK--- 1809 Query: 441 AIEAKQVAAQEAER-----------AKFIVEKAEQDKKSAIIRAQGEAKSAELIGNAIAN 295 AI+ + +E E A+ + K+E+ K +++ + K+ E + + + Sbjct: 1810 AIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDK 1869 Query: 294 NPAFVAL--RQIEAAREIA 244 + RQIE A EIA Sbjct: 1870 LQQKIKTYKRQIEEAEEIA 1888
>HFLC_BUCBP (Q89A40) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 30.8 bits (68), Expect = 3.6 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 8/142 (5%) Frame = -3 Query: 648 NYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITS 469 NY + I+ T + Q N L+ +S +IL R +++ D S+ Sbjct: 162 NYKNVIFKKAINGTSNQNINQEN--NLLQSISDLSEIGVQILDVRIGKISVSEDFFSLIC 219 Query: 468 LSFGKEFTH-AIEAKQVAAQEAE----RAKFIVEK--AEQDKKSAIIRAQGEAKSAELIG 310 E+ A + + ++AE RA + V K ++ + + II+++GEA A+L Sbjct: 220 SRINSEYRAIAKHYRLMGDKQAEELKLRANYEVVKILSKAQRSALIIKSEGEALVAKLFS 279 Query: 309 NAIANNPAFVA-LRQIEAAREI 247 +A + P F + +R ++A I Sbjct: 280 DAFSQEPEFFSFIRSLQAYENI 301
>HEM1_ECOL6 (Q8FI03) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 418 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = -3 Query: 552 AVSREIRKILTERAKNFNIALDDV-SITSLSFGKEFTHAIEAKQVAAQEAERAKFIVEKA 376 AV R++ + + A + ++DD+ SI S + + A+EA+ + AQEA + Sbjct: 280 AVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQEASEFMAWLRAQ 339 Query: 375 EQDKKSAIIRAQGEAKSAELIGNAIA 298 + R+Q E EL A+A Sbjct: 340 SASETIRDYRSQAEQVRDELTAKALA 365
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 30.4 bits (67), Expect = 4.8 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 311 VMPSPTTLLSSHSGRLKPPGRSPTPSQSPT 222 V+P P+T + + G+ PPG+ P P PT Sbjct: 709 VLPPPSTPMPTGPGQPAPPGQQPPPLAQPT 738
>PURA_DEHE1 (Q3Z7V0) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 423 Score = 30.4 bits (67), Expect = 4.8 Identities = 29/99 (29%), Positives = 41/99 (41%) Frame = -3 Query: 633 VLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSFGK 454 +LP +HE L+ V+ N +ILT+ I+LD++ T L +GK Sbjct: 151 LLPEYLHERLEYVLECKN----------------QILTKVYDAAPISLDEIYETCLKWGK 194 Query: 453 EFTHAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAQG 337 E I+ E I E QDKK + AQG Sbjct: 195 ELAPNIK---------ETTHIIEEAISQDKKIIMEGAQG 224
>ATP9_PODAN (Q03672) ATP synthase protein 9, mitochondrial precursor (EC| 3.6.3.14) (Lipid-binding protein) Length = 144 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = -3 Query: 579 ASQLITQREAVSREIRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEAKQVAAQEAER 400 A++ ITQ+ A S EI + + E +KN + + +T G A VA A R Sbjct: 54 ATRQITQKRAYSSEIAQAMVEVSKNLGMGTAAIGLTGAGIGIGLVFAALLNGVARNPALR 113 Query: 399 AK 394 + Sbjct: 114 GQ 115
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)| Length = 1969 Score = 29.6 bits (65), Expect = 8.1 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 10/108 (9%) Frame = -3 Query: 537 IRKILTERAKNFNIALDDVSITSLSFGKEFTHAIEAKQVAAQE----AERAKFIVE---- 382 IRK L + K I LDD +L GK+ +EA+ A ++ +R E Sbjct: 1795 IRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIRAIEQELDGEQRRHQDTEKNWR 1854 Query: 381 KAEQDKKSAIIRAQGEAKSAELIGNAIANNPAFVAL--RQIEAAREIA 244 KAE+ K + E K+ E + + + + RQ+E A E+A Sbjct: 1855 KAERRVKEVEFQVVEEKKNEERLTELVDKLQCKLKIFKRQVEEAEEVA 1902 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,965,276 Number of Sequences: 219361 Number of extensions: 1622596 Number of successful extensions: 6552 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 6039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6511 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
