ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RR1_SPIOL (P29344) 30S ribosomal protein S1, chloroplast precurs... 232 6e-61
2RS1_SYNP6 (P46228) 30S ribosomal protein S1 135 1e-31
3RS1A_SYNY3 (P73530) 30S ribosomal protein S1 homolog A 126 6e-29
4RS1_LEULA (P50889) 40S ribosomal protein S1 87 3e-17
5RS1_SYNP7 (O33698) 30S ribosomal protein S1 82 1e-15
6RS1H_BACC1 (O06000) 30S ribosomal protein S1 homolog 82 1e-15
7RS1H_BACSU (P38494) 30S ribosomal protein S1 homolog 80 4e-15
8RS1B_SYNY3 (P74142) 30S ribosomal protein S1 homolog B 79 1e-14
9RS1_STAAN (Q7A5J0) 30S ribosomal protein S1 75 2e-13
10RS1_STAAM (Q99U14) 30S ribosomal protein S1 75 2e-13
11RS1_STAAW (Q8NWM8) 30S ribosomal protein S1 74 3e-13
12RS1_STAAS (Q6G987) 30S ribosomal protein S1 74 3e-13
13RS1_STAAR (Q6GGT5) 30S ribosomal protein S1 74 3e-13
14RS1_STAAC (Q5HFU7) 30S ribosomal protein S1 74 3e-13
15ISPH_CLOAB (Q97I09) 4-hydroxy-3-methylbut-2-enyl diphosphate red... 74 5e-13
16RS1_STAS1 (Q49XT0) 30S ribosomal protein S1 73 6e-13
17RS1_BUCBP (Q89AJ3) 30S ribosomal protein S1 72 1e-12
18RS1_STAEQ (Q5HP69) 30S ribosomal protein S1 72 1e-12
19RS1_PROSP (P14128) 30S ribosomal protein S1 (Fragment) 70 4e-12
20RS1_SHIFL (P0AG70) 30S ribosomal protein S1 70 4e-12
21RS1_ECOLI (P0AG67) 30S ribosomal protein S1 70 4e-12
22RS1_ECOL6 (P0AG68) 30S ribosomal protein S1 70 4e-12
23RS1_ECO57 (P0AG69) 30S ribosomal protein S1 70 4e-12
24RS1_BUCAP (Q44653) 30S ribosomal protein S1 70 4e-12
25RS1_STAHJ (Q4L6I1) 30S ribosomal protein S1 70 4e-12
26RS1_BUCAI (P57395) 30S ribosomal protein S1 70 4e-12
27RS1_HAEIN (Q48082) 30S ribosomal protein S1 70 5e-12
28RS1_RHIME (P14129) 30S ribosomal protein S1 70 5e-12
29RS1_RICPR (Q9ZD28) 30S ribosomal protein S1 69 9e-12
30RR1_PORPU (P51345) Chloroplast 30S ribosomal protein S1 68 3e-11
31RS1_MYCTU (O06147) 30S ribosomal protein S1 66 8e-11
32RS1_RHOPA (Q6NDP1) 30S ribosomal protein S1 (RRP-S1) 66 8e-11
33RS1_MYCLE (P46836) 30S ribosomal protein S1 66 1e-10
34RS1_CHLPN (Q9Z8M3) 30S ribosomal protein S1 65 2e-10
35GS13_BACSU (P80870) General stress protein 13 (GSP13) 64 5e-10
36ISPH_CLOTE (Q895G2) 4-hydroxy-3-methylbut-2-enyl diphosphate red... 63 6e-10
37RS1_CHLMU (P38016) 30S ribosomal protein S1 (70 kDa antigen) 63 6e-10
38RS1_CHLTR (O84100) 30S ribosomal protein S1 63 6e-10
39YHGF_ECOLI (P46837) Protein yhgF 58 2e-08
40MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-depend... 58 3e-08
41YABR_BACSU (P37560) Hypothetical protein yabR 57 4e-08
42YHGF_NEIMB (Q51152) Hypothetical protein NMB0075 57 5e-08
43YHGF_NEIMA (P57072) Hypothetical protein NMA0194 57 5e-08
44RS1_HELPY (P56008) 30S ribosomal protein S1 57 6e-08
45ISPH_FUSNN (Q8RI52) 4-hydroxy-3-methylbut-2-enyl diphosphate red... 57 6e-08
46RS1_HELPJ (Q9ZKF6) 30S ribosomal protein S1 57 6e-08
47PNP_BUCAP (Q8K9H5) Polyribonucleotide nucleotidyltransferase (EC... 55 1e-07
48PNP_ECOLI (P05055) Polyribonucleotide nucleotidyltransferase (EC... 55 1e-07
49PNP_PHOLU (P41121) Polyribonucleotide nucleotidyltransferase (EC... 55 1e-07
50PNP_HAEIN (P44584) Polyribonucleotide nucleotidyltransferase (EC... 55 2e-07
51PNP_BUCBP (Q89AF8) Polyribonucleotide nucleotidyltransferase (EC... 55 2e-07
52IF2A_METJA (Q57581) Translation initiation factor 2 alpha subuni... 54 4e-07
53PNP_BUCAI (P57454) Polyribonucleotide nucleotidyltransferase (EC... 54 4e-07
54PNP_YEREN (O34275) Polyribonucleotide nucleotidyltransferase (EC... 52 2e-06
55IF2A_AERPE (Q9YF02) Translation initiation factor 2 alpha subuni... 50 7e-06
56Y568_HAEIN (P71353) Hypothetical protein HI0568 49 1e-05
57IF2A_PYRKO (Q5JE49) Translation initiation factor 2 alpha subuni... 49 1e-05
58RRP5_YEAST (Q05022) rRNA biogenesis protein RRP5 48 3e-05
59TEX_BORPE (Q45388) Protein tex 46 8e-05
60IF2A_PYRFU (Q8U1R5) Translation initiation factor 2 alpha subuni... 45 2e-04
61IF2A_ARCFU (O29723) Translation initiation factor 2 alpha subuni... 45 2e-04
62IF2A_METKA (Q8TY86) Translation initiation factor 2 alpha subuni... 43 7e-04
63RPOE_SULAC (P39466) DNA-directed RNA polymerase subunit E (EC 2.... 43 7e-04
64NO40_MOUSE (Q9ESX4) Nucleolar protein of 40 kDa (pNO40) (Zinc fi... 41 0.003
65NO40_HUMAN (Q9NP64) Nucleolar protein of 40 kDa (pNO40) (Zinc fi... 40 0.004
66IF2A_METTH (O27363) Translation initiation factor 2 alpha subuni... 39 0.010
67RPOE1_METJA (Q57840) DNA-directed RNA polymerase subunit E' (EC ... 37 0.049
68RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death ... 33 0.71
69RNR_BUCAP (Q8K917) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB p... 32 1.6
70PCCA_CAEBR (Q612F5) Propionyl-CoA carboxylase alpha chain, mitoc... 31 2.7
71RNR_BUCAI (P57628) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB p... 30 4.6
72VG05_BPT4 (P16009) Tail-associated lysozyme (EC 3.2.1.17) (Prote... 30 4.6
73DCR1C_BRARE (Q5RGE5) Artemis protein (EC 3.1.-.-) (DNA cross-lin... 30 6.0
74GLYA1_BURTA (Q2SYS4) Serine hydroxymethyltransferase 1 (EC 2.1.2... 30 7.9
75Y830_CORDI (Q6NIE7) Hypothetical transport protein DIP0830 30 7.9 
>RR1_SPIOL (P29344) 30S ribosomal protein S1, chloroplast precursor (CS1)|
          Length = 411

 Score =  232 bits (592), Expect = 6e-61
 Identities = 118/124 (95%), Positives = 122/124 (98%)
 Frame = -1

Query: 642 ADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLK 463
           ADSQAQLGIGSVV GTV+SLKPYGAFIDIGGINGLLHVSQISHDRV+DI+TVLQPGDTLK
Sbjct: 252 ADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLK 311

Query: 462 VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQAEAMARADM 283
           VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA+EMAQ FRQRIAQAEAMARADM
Sbjct: 312 VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADM 371

Query: 282 LRFQ 271
           LRFQ
Sbjct: 372 LRFQ 375
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>RS1_SYNP6 (P46228) 30S ribosomal protein S1|
          Length = 306

 Score =  135 bits (339), Expect = 1e-31
 Identities = 61/106 (57%), Positives = 84/106 (79%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           +L +G VV+G V  +KPYGAFIDIGG++GLLH+S+ISHD +    +V    D +KVMI+ 
Sbjct: 192 RLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNVNDEVKVMIID 251

Query: 447 HDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
            D ERGR+SLSTK+LEP PGDM+RNP++V+EKA+EMA  +R+++ Q
Sbjct: 252 LDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQ 297



 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGING-LLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G  V+GTV +L+P GA IDIG      L V ++S +RV     VLQP +  +  ILS + 
Sbjct: 31  GDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSINRVESPEEVLQPSEMREFFILSDEN 90

Query: 438 ERGRVSLSTKKLE 400
           E G+++LS +++E
Sbjct: 91  EDGQLTLSIRRIE 103
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>RS1A_SYNY3 (P73530) 30S ribosomal protein S1 homolog A|
          Length = 328

 Score =  126 bits (316), Expect = 6e-29
 Identities = 62/110 (56%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L +  VV+G+V  +KPYGAFIDIGG++GLLH+S+ISHD +    +V    D +KVMI+  
Sbjct: 193 LEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDL 252

Query: 444 DRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQ-RIAQAEAM 298
           D ERGR+SLSTK+LEP PG M+++  LV E ADEMA+IFRQ R+A+A+ +
Sbjct: 253 DAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQKRLAEAQGI 302



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G +V GTV S++  GA IDIG      + + ++S +RV D   VLQP +T +  IL+ + 
Sbjct: 31  GDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPEEVLQPNETREFFILTDEN 90

Query: 438 ERGRVSLSTKKLE 400
           E G+++LS +++E
Sbjct: 91  EDGQLTLSIRRIE 103
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>RS1_LEULA (P50889) 40S ribosomal protein S1|
          Length = 429

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 47/102 (46%), Positives = 67/102 (65%)
 Frame = -1

Query: 642 ADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLK 463
           A+  ++L +G VV GTV  L  +GAF+D+GG++GL+HVS+ISHDRV + + VL  GD + 
Sbjct: 222 AEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKNPADVLTKGDKVD 281

Query: 462 VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMA 337
           V IL+ D E+GR+SLS K  +  P D         E AD++A
Sbjct: 282 VKILALDTEKGRISLSIKATQRGPWD---------EAADQIA 314



 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMIL 451
           Q+  GSV+ GTV+ +K +GAF++I  GI GL+HVSQIS+ R+ + S VL+ GD ++V +L
Sbjct: 312 QIAAGSVLEGTVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVL 371

Query: 450 SHDRERGRVSLSTKKLEPTP 391
                  R+SLS K LE  P
Sbjct: 372 DIKPAEERISLSMKALEEKP 391
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>RS1_SYNP7 (O33698) 30S ribosomal protein S1|
          Length = 295

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 37/104 (35%), Positives = 67/104 (64%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           ++ +G ++ G V  LKP+G F+D+GG   LL ++QIS   VAD+  + + GD ++ ++++
Sbjct: 189 EIEVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVA 248

Query: 447 HDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRI 316
            D  +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 249 IDNTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G +V G V      GA+IDIGG     L   + +   V D+   L   + L+ +++    
Sbjct: 28  GQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRDQN 87

Query: 438 ERGRVSLSTKKL 403
           E G+V++S + L
Sbjct: 88  EDGQVTVSLRAL 99
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>RS1H_BACC1 (O06000) 30S ribosomal protein S1 homolog|
          Length = 382

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G VV GTV+ L  +GAF+++GG++GL+H+SQISH+RV   S VL+ G  +KV +LS D +
Sbjct: 189 GDVVEGTVQRLTDFGAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDAD 248

Query: 435 RGRVSLSTKKLEPTPGDMI 379
             R+SLS K  +P P + I
Sbjct: 249 TQRISLSIKAAQPGPWENI 267



 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G +  G V+ L  +GAF++I  G+ GL+HVSQI++  V + + VL+ G  +KV +L    
Sbjct: 274 GDIREGIVKRLVTFGAFVEILPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHV 333

Query: 438 ERGRVSLSTKK 406
              R+SLS K+
Sbjct: 334 AEKRISLSIKE 344
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>RS1H_BACSU (P38494) 30S ribosomal protein S1 homolog|
          Length = 382

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 40/82 (48%), Positives = 56/82 (68%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L +GSV+ G V+ L  +GAF+DIGGI+GL+H+SQ+SH  V   S V++ G  +KV +LS 
Sbjct: 185 LEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSV 244

Query: 444 DRERGRVSLSTKKLEPTPGDMI 379
           DR+  R+SLS K   P P + I
Sbjct: 245 DRDNERISLSIKDTLPGPWNQI 266



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G V+ GTV+ L  +GAF++I  G+ GL+H+SQIS+  +     VL+ G T+KV +L  + 
Sbjct: 273 GDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNE 332

Query: 438 ERGRVSLSTKKLEPTP 391
              R+SLS ++LE TP
Sbjct: 333 NEERISLSMRELEETP 348
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>RS1B_SYNY3 (P74142) 30S ribosomal protein S1 homolog B|
          Length = 305

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = -1

Query: 642 ADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLK 463
           A+S  ++  G++  G V  ++PYG F++I G+ GLLHVSQ+S  RV  ++T+   G  + 
Sbjct: 185 AESMGKIAAGNIYEGKVAKIQPYGVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFGQAIS 244

Query: 462 VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEM 340
           V +   D  + R+SLST+ LE  PG+++       EK DEM
Sbjct: 245 VYVQEIDEYKNRISLSTRILETYPGELV-------EKFDEM 278
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>RS1_STAAN (Q7A5J0) 30S ribosomal protein S1|
          Length = 391

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           + Q     V+ G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V 
Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332

Query: 456 ILSHDRERGRVSLSTKKLEP 397
           IL  D E  RVSLS K   P
Sbjct: 333 ILGIDEENERVSLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>RS1_STAAM (Q99U14) 30S ribosomal protein S1|
          Length = 391

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           + Q     V+ G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V 
Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332

Query: 456 ILSHDRERGRVSLSTKKLEP 397
           IL  D E  RVSLS K   P
Sbjct: 333 ILGIDEENERVSLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>RS1_STAAW (Q8NWM8) 30S ribosomal protein S1|
          Length = 391

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           + Q     V+ G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V 
Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332

Query: 456 ILSHDRERGRVSLSTKKLEP 397
           IL  D E  RVSLS K   P
Sbjct: 333 ILGIDEENERVSLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>RS1_STAAS (Q6G987) 30S ribosomal protein S1|
          Length = 391

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           + Q     V+ G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V 
Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332

Query: 456 ILSHDRERGRVSLSTKKLEP 397
           IL  D E  RVSLS K   P
Sbjct: 333 ILGIDEENERVSLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>RS1_STAAR (Q6GGT5) 30S ribosomal protein S1|
          Length = 391

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = -1

Query: 600 GTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRV 424
           G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V IL  D E  RV
Sbjct: 284 GVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERV 343

Query: 423 SLSTKKLEP 397
           SLS K   P
Sbjct: 344 SLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>RS1_STAAC (Q5HFU7) 30S ribosomal protein S1|
          Length = 391

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G  +KV I S 
Sbjct: 191 LNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSI 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           DR+  R+SLS K   PTP + I+
Sbjct: 251 DRDTERISLSIKDTLPTPFENIK 273



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           + Q     V+ G V  L  +GAF++I  G+ GL+H+S+I+H  +     VL+PG  + V 
Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332

Query: 456 ILSHDRERGRVSLSTKKLEP 397
           IL  D E  RVSLS K   P
Sbjct: 333 ILGIDEENERVSLSIKATLP 352



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   +   S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVEAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  FDEENETGAYILSRRQLE 93
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>ISPH_CLOAB (Q97I09) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 642

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G VV G V+ L  +GAF++I G++GLLHVS+IS  RV   + VL+ GD +KV +LS D+E
Sbjct: 484 GQVVEGEVKRLTDFGAFVEIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYVLSVDKE 543

Query: 435 RGRVSLSTKKLEPTP 391
             ++SLS KKL   P
Sbjct: 544 NKKLSLSVKKLTENP 558



 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
           +GSVVLG V     +GAF+ +  G++GL+H+S+ISH R+A  S  L  G+ +K  IL   
Sbjct: 568 VGSVVLGKVIRFADFGAFVKLEPGVDGLVHISEISHKRIAKPSDALNVGEEIKAKILEVS 627

Query: 441 RERGRVSLSTKKLE 400
            E  ++ LS +++E
Sbjct: 628 SEEKKIGLSIREVE 641
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>RS1_STAS1 (Q49XT0) 30S ribosomal protein S1|
          Length = 393

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 54/83 (65%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAF+DIGG++GL+HVS++SH+ V     V+  G+T+ V I S 
Sbjct: 191 LNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPEDVVSIGETVNVKIKSV 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           D++  R+SLS K   P+P + I+
Sbjct: 251 DKDSERISLSIKDTLPSPFESIK 273



 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G V+ GTV  L  +GAF++I  G+ GL+H+S+ISH  +   S  L+PG  + V +L  D 
Sbjct: 279 GDVIEGTVVRLANFGAFVEIKPGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVLGVDV 338

Query: 438 ERGRVSLSTKKLEP 397
           E  R+SLS K   P
Sbjct: 339 ENERISLSIKATLP 352



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + + G   NG++ +SQ+S   + + S  ++ GD +   +    
Sbjct: 16  GDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVKVGDEIGAYVTKVE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + E G   LS ++LE
Sbjct: 76  YDEENETGAYILSKRQLE 93
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>RS1_BUCBP (Q89AJ3) 30S ribosomal protein S1|
          Length = 566

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G +V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD +K+ IL  DRE
Sbjct: 192 GLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKILKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           + RVSL  K+L   P
Sbjct: 252 KIRVSLGLKQLSDDP 266



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -1

Query: 606 VLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHDRER 433
           + G V +L  YG F++I  G+ GL+HVS++   ++    S ++Q    +KVMIL  D ER
Sbjct: 280 ITGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKMVQVNSVVKVMILDIDEER 339

Query: 432 GRVSLSTKKLEPTP 391
            R+SL  K+ +  P
Sbjct: 340 RRISLGLKQCKNNP 353
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>RS1_STAEQ (Q5HP69) 30S ribosomal protein S1|
          Length = 392

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 36/83 (43%), Positives = 54/83 (65%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAFIDIGG++GL+HVS++SH+ V     V+  G+ +KV + S 
Sbjct: 191 LNEGDVIDGKVARLTNFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSVGEAVKVKVKSV 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           +++  R+SLS K   PTP + I+
Sbjct: 251 EKDSERISLSIKDTLPTPFENIK 273



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 609 VVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRER 433
           V+ GTV  L  +GAF++I   + GL+H+S+I H  +   + VL+PG  + V IL  D + 
Sbjct: 281 VIEGTVVRLANFGAFVEIAPSVQGLVHISEIDHKHIGSPNEVLEPGQQVNVKILGIDEDN 340

Query: 432 GRVSLSTKKLEP 397
            R+SLS K   P
Sbjct: 341 ERISLSIKATLP 352



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   + + S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIENPSEVVKVGDEVEAYVTKIE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
              + + G   LS ++LE
Sbjct: 76  FDEENDTGAYILSKRQLE 93
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>RS1_PROSP (P14128) 30S ribosomal protein S1 (Fragment)|
          Length = 378

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  DRE
Sbjct: 87  GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 146

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 147 RTRVSLGLKQLGEDP 161



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G+ + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GD ++VM+L  D
Sbjct: 172 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 231

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+ +  P
Sbjct: 232 EERRRISLGLKQCKSNP 248



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIST-VLQPGDTLKVMILSHD 442
           G  V G ++S+  +G FI + GGI+GL+H+S IS +   + +    + GD +  ++L  D
Sbjct: 259 GDRVEGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 318

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+L   P
Sbjct: 319 AERERISLGVKQLAEDP 335
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>RS1_SHIFL (P0AG70) 30S ribosomal protein S1|
          Length = 557

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  DRE
Sbjct: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGEDP 266



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G+ + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GD ++VM+L  D
Sbjct: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+ +  P
Sbjct: 337 EERRRISLGLKQCKANP 353



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIST-VLQPGDTLKVMILSHD 442
           G  V G ++S+  +G FI + GGI+GL+H+S IS +   + +    + GD +  ++L  D
Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+L   P
Sbjct: 424 AERERISLGVKQLAEDP 440



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G++V G V ++   GA +++  G+ G L  S+ S DRV D + VL  GD ++      DR
Sbjct: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510

Query: 438 ERGRVSLSTK 409
           +   +SLS +
Sbjct: 511 KNRAISLSVR 520
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>RS1_ECOLI (P0AG67) 30S ribosomal protein S1|
          Length = 557

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  DRE
Sbjct: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGEDP 266



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G+ + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GD ++VM+L  D
Sbjct: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+ +  P
Sbjct: 337 EERRRISLGLKQCKANP 353



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIST-VLQPGDTLKVMILSHD 442
           G  V G ++S+  +G FI + GGI+GL+H+S IS +   + +    + GD +  ++L  D
Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+L   P
Sbjct: 424 AERERISLGVKQLAEDP 440



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G++V G V ++   GA +++  G+ G L  S+ S DRV D + VL  GD ++      DR
Sbjct: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510

Query: 438 ERGRVSLSTK 409
           +   +SLS +
Sbjct: 511 KNRAISLSVR 520
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>RS1_ECOL6 (P0AG68) 30S ribosomal protein S1|
          Length = 557

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  DRE
Sbjct: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGEDP 266



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G+ + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GD ++VM+L  D
Sbjct: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+ +  P
Sbjct: 337 EERRRISLGLKQCKANP 353



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIST-VLQPGDTLKVMILSHD 442
           G  V G ++S+  +G FI + GGI+GL+H+S IS +   + +    + GD +  ++L  D
Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+L   P
Sbjct: 424 AERERISLGVKQLAEDP 440



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G++V G V ++   GA +++  G+ G L  S+ S DRV D + VL  GD ++      DR
Sbjct: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510

Query: 438 ERGRVSLSTK 409
           +   +SLS +
Sbjct: 511 KNRAISLSVR 520
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>RS1_ECO57 (P0AG69) 30S ribosomal protein S1|
          Length = 557

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  DRE
Sbjct: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGEDP 266



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G+ + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GD ++VM+L  D
Sbjct: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+ +  P
Sbjct: 337 EERRRISLGLKQCKANP 353



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIST-VLQPGDTLKVMILSHD 442
           G  V G ++S+  +G FI + GGI+GL+H+S IS +   + +    + GD +  ++L  D
Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+L   P
Sbjct: 424 AERERISLGVKQLAEDP 440



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G++V G V ++   GA +++  G+ G L  S+ S DRV D + VL  GD ++      DR
Sbjct: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510

Query: 438 ERGRVSLSTK 409
           +   +SLS +
Sbjct: 511 KNRAISLSVR 520
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>RS1_BUCAP (Q44653) 30S ribosomal protein S1|
          Length = 559

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 35/81 (43%), Positives = 51/81 (62%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  + G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V IL  D+E
Sbjct: 192 GIEIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINVKILKFDKE 251

Query: 435 RGRVSLSTKKLEPTPGDMIRN 373
           R RVSL  K+L   P   I N
Sbjct: 252 RTRVSLGLKQLGEDPWIAISN 272



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTV--LQPGDTLKVMILSH 445
           G  V G ++S+  +G FI + GGI+GL+H+S IS  +++    V   + GD +  ++L  
Sbjct: 364 GIHVSGKIKSITDFGIFIGLKGGIDGLVHLSDISW-KISGEEAVKNYKKGDEISAVVLQV 422

Query: 444 DRERGRVSLSTKKLEPTP 391
           D ER R+SL  K+LE  P
Sbjct: 423 DAERERISLGIKQLEEDP 440
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>RS1_STAHJ (Q4L6I1) 30S ribosomal protein S1|
          Length = 392

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/83 (40%), Positives = 52/83 (62%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           L  G V+ G V  L  +GAF+DIGG++GL+HVS++SH+ V     V+  G  + V + S 
Sbjct: 191 LNAGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVDSPEDVVSVGQEVDVKVKSV 250

Query: 444 DRERGRVSLSTKKLEPTPGDMIR 376
           +++  R+SLS K   PTP + I+
Sbjct: 251 EKDAERISLSIKDTLPTPFESIK 273



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 609 VVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRER 433
           V+ G V  L  +GAF++I  G+ GL+H+S+I+H+ +      L+PG  + V IL  D E 
Sbjct: 281 VIEGKVVRLANFGAFVEIAPGVQGLVHISEIAHEHIGTPGEKLEPGQQVNVKILGIDEEN 340

Query: 432 GRVSLSTKKLEP 397
            R+SLS K   P
Sbjct: 341 ERISLSIKATLP 352



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQPGDTLKVMI---- 454
           G  V G V+ ++     + I G   NG++ +SQ+S   + + S V++ GD ++  +    
Sbjct: 16  GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIENPSEVVKQGDEIEAYVTKIE 75

Query: 453 LSHDRERGRVSLSTKKLE 400
           +  + + G   LS ++LE
Sbjct: 76  VDEENDSGVYILSKRQLE 93
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>RS1_BUCAI (P57395) 30S ribosomal protein S1|
          Length = 558

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G  V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + + IL  DRE
Sbjct: 192 GMHVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINIKILKFDRE 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGEDP 266



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTV-LQPGDTLKVMILSHD 442
           G  VLG ++S+  +G FI + GGI+GL+H+S IS     + + V  +  D +  ++L  D
Sbjct: 364 GVHVLGKIKSITDFGIFIGLNGGIDGLVHLSDISWTIPGEEAVVKYKKNDEISAVVLQVD 423

Query: 441 RERGRVSLSTKKLEPTP 391
            ER R+SL  K+LE  P
Sbjct: 424 AERERISLGIKQLEEDP 440



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -1

Query: 600 GTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHDRERGR 427
           G V +L  YG F++I  G+ GL+HVS++   ++    S V+   D ++VM+L  D ER R
Sbjct: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVTVNDVVEVMVLDIDEERRR 341

Query: 426 VSLSTKKLEPTP 391
           +SL  K+ +  P
Sbjct: 342 ISLGLKQCKINP 353
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>RS1_HAEIN (Q48082) 30S ribosomal protein S1|
          Length = 549

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 33/75 (44%), Positives = 50/75 (66%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           GS V G V++L  YGAF+D+GG++GLLH++ ++  RV   S ++  GD + V +L  D++
Sbjct: 192 GSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKD 251

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSL  K+L   P
Sbjct: 252 RTRVSLGLKQLGQDP 266



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSH 445
           + S + G V +L  YG F++I  G+ GL+HVS++   ++    S V+  GDT++VM+L  
Sbjct: 276 VNSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVSLGDTVEVMVLEI 335

Query: 444 DRERGRVSLSTKKLEPTP 391
           D ER R+SL  K+ +  P
Sbjct: 336 DEERRRISLGLKQCKANP 353



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQ--PGDTLKVMILSH 445
           G  V G ++S+  +G FI + GGI+GL+H+S IS   ++    V Q   GD +  ++L+ 
Sbjct: 364 GDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWS-ISGEEAVRQYKKGDEVSAVVLAV 422

Query: 444 DRERGRVSLSTKKLEPTP 391
           D  + R+SL  K+LE  P
Sbjct: 423 DAVKERISLGIKQLEEDP 440
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>RS1_RHIME (P14129) 30S ribosomal protein S1|
          Length = 568

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G VV G V+++  YGAF+D+GGI+GLLHV+ ++  RV   S +L  G  +KV I+  ++E
Sbjct: 198 GQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQE 257

Query: 435 RGRVSLSTKKLEPTPGDMI 379
             R+SL  K+LE  P D I
Sbjct: 258 THRISLGMKQLESDPWDGI 276



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRV-ADISTVLQPGDTLKVM 457
           A+  +G  + GTV ++  YGAF+++  GI GL+H+S++S  +       +L     + V+
Sbjct: 278 AKYPVGKKISGTVTNITDYGAFVELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVV 337

Query: 456 ILSHDRERGRVSLSTKKLEPTP 391
           +L  D  + R+SL  K+    P
Sbjct: 338 VLEVDPTKRRISLGLKQTLENP 359



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVAD-ISTVLQPGDTLKVMILSHD 442
           G+ V G V++   +G FI + G ++G++H+S +  +R  + +      GD ++ ++L  D
Sbjct: 370 GTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVRAVVLDVD 429

Query: 441 RERGRVSLSTKKL 403
            ++ R+SL  K+L
Sbjct: 430 VDKERISLGIKQL 442
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>RS1_RICPR (Q9ZD28) 30S ribosomal protein S1|
          Length = 568

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 34/80 (42%), Positives = 52/80 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G V+ G V+++  YGAFID+G ++GLLH++ IS  RV   S VL+    +KVM++  D +
Sbjct: 205 GIVLEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEK 264

Query: 435 RGRVSLSTKKLEPTPGDMIR 376
             R+SL  K+L+  P D I+
Sbjct: 265 TKRISLGIKQLDSNPWDAIK 284



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQIS-HDRVADISTVLQPGDTLKVMILSH 445
           IG+++   + ++  +G F+ +G  ++G++H   IS  D   D+    + GD ++  +L+ 
Sbjct: 376 IGTIIKAPIRNITDFGIFVVLGNNMDGMIHEGDISWEDNGTDLLKSYKKGDEIECKVLAI 435

Query: 444 DRERGRVSLSTKKLEPTP 391
           + E+ +VSL  K+L P P
Sbjct: 436 NFEKEQVSLGIKQLLPNP 453
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>RR1_PORPU (P51345) Chloroplast 30S ribosomal protein S1|
          Length = 263

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 30/81 (37%), Positives = 54/81 (66%)
 Frame = -1

Query: 642 ADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLK 463
           A + + L +G+++ G +  + PYG FI  G + GL+H+S+I+  +V  I +  + GDT+K
Sbjct: 183 AQASSNLIVGNIIEGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDTIK 242

Query: 462 VMILSHDRERGRVSLSTKKLE 400
            +I+  D+++GR+SLS K L+
Sbjct: 243 AVIIHVDKKQGRLSLSMKHLK 263



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 624 LGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           L +G +V GT+ S +  G  +DIG  ++  L + ++S ++  +    L   DT +  +L 
Sbjct: 24  LNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNINDTREFFLLD 83

Query: 447 HDRERGRVSLSTKKLE 400
           ++ E  ++ LS ++LE
Sbjct: 84  YNVESRQLILSIRRLE 99
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>RS1_MYCTU (O06147) 30S ribosomal protein S1|
          Length = 481

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G++  G V S+  +GAF+D+GG++GL+HVS++S   +   S V+Q GD + V +L  D +
Sbjct: 209 GTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMD 268

Query: 435 RGRVSLSTKKLEPTP 391
           R RVSLS K  +  P
Sbjct: 269 RERVSLSLKATQEDP 283



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
           IG +V G V  L P+GAF+ +  GI GL+H+S+++   V     V+  GD   V ++  D
Sbjct: 293 IGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDID 352

Query: 441 RERGRVSLSTKK 406
            ER R+SLS K+
Sbjct: 353 LERRRISLSLKQ 364
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>RS1_RHOPA (Q6NDP1) 30S ribosomal protein S1 (RRP-S1)|
          Length = 565

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRE 436
           G V+ G V+++  YGAF+D+GGI+GLLHV+ I+  RV   + VL  G T+KV I+  + E
Sbjct: 201 GQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLTIGQTVKVKIIKINHE 260

Query: 435 RGRVSLSTKKLEPTP 391
             R+SL  K+L   P
Sbjct: 261 THRISLGMKQLLDDP 275



 Score = 39.7 bits (91), Expect = 0.008
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRV-ADISTVLQPGDTLKV 460
           +A+  + +   G V ++  YGAF+++  GI GL+HVS++S  +       ++     ++V
Sbjct: 280 EAKYPLNARFTGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVSTSQEVEV 339

Query: 459 MILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVF 358
            +L  D  + R+SL  K+        +RNP  VF
Sbjct: 340 QVLEVDSVKRRISLGLKQ-------TMRNPWEVF 366
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>RS1_MYCLE (P46836) 30S ribosomal protein S1|
          Length = 481

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 33/79 (41%), Positives = 51/79 (64%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           QL  G++  G V S+  +GAF+D+GG++GL+HVS++S   +   S V+Q G+ + V +L 
Sbjct: 205 QLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGNEVTVEVLD 264

Query: 447 HDRERGRVSLSTKKLEPTP 391
            D +R RVSLS K  +  P
Sbjct: 265 VDMDRERVSLSLKATQEDP 283



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
           IG +V G V  L P+GAF+ +  GI GL+H+S+++   V     V+  GD   V ++  D
Sbjct: 293 IGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDID 352

Query: 441 RERGRVSLSTKK 406
            ER R+SLS K+
Sbjct: 353 LERRRISLSLKQ 364
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>RS1_CHLPN (Q9Z8M3) 30S ribosomal protein S1|
          Length = 580

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           Q+ IG    G V+++  +G F+D+ GI+GLLH++ ++  R+   S +++    L+V+ILS
Sbjct: 216 QISIGEYRKGVVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILS 275

Query: 447 HDRERGRVSLSTKKLEPTPGDMI 379
            D+E+GRV+L  K+ E  P + I
Sbjct: 276 VDKEKGRVALGLKQKEHNPWEDI 298



 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G  VLG +  L PYGAFI+I  GI GL+H+S++S    + D S V+  GD ++ ++LS  
Sbjct: 305 GKRVLGKIVKLLPYGAFIEIEEGIEGLIHISEMSWVKNIVDPSEVVNKGDEVEAIVLSIQ 364

Query: 441 RERGRVSLSTKKLEPTPGDMI 379
           ++ G++SL  K+ E  P D I
Sbjct: 365 KDEGKISLGLKQTERNPWDNI 385



 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           +A    G+V+ G V  +  +GAF+++  GI GL+HVS++S    A I  ++  G+ +   
Sbjct: 473 EAMFPAGTVISGVVTKITAFGAFVELQNGIEGLIHVSELSDKPFAKIEDIISIGENVSAK 532

Query: 456 ILSHDRERGRVSLSTKK 406
           ++  D +  +VSLS K+
Sbjct: 533 VIKLDPDHKKVSLSVKE 549



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSH 445
           IG  V   +++L  YGAF+++  GI GL+H+S +S   +V+  S + + G++++ +ILS 
Sbjct: 391 IGLHVNAEIKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNSVEAVILSV 450

Query: 444 DRERGRVSLSTKKLEPTPGDMI 379
           D+E  +++L  K+L   P + I
Sbjct: 451 DKESKKITLGVKQLSSNPWNEI 472
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>GS13_BACSU (P80870) General stress protein 13 (GSP13)|
          Length = 129

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A+  +GSV  G V  L+ YGAF+ +     GL+H+S+++H  V DI+  L  GD ++V +
Sbjct: 2   AKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKV 61

Query: 453 LSHDRERGRVSLSTKKLEPTPGDMIRNPK 367
           L+ D E+G++SLS +  +  P      P+
Sbjct: 62  LAVDEEKGKISLSIRATQAAPEKKESKPR 90
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>ISPH_CLOTE (Q895G2) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 635

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 639 DSQAQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLK 463
           D + +  +G++VLGTV     +GAF+++  G++GL+H+SQISH RV  +   L  G+ +K
Sbjct: 553 DVEVKYPVGNIVLGTVVRFASFGAFVELEPGVDGLIHISQISHKRVDRVEDELSIGEQVK 612

Query: 462 VMILSHDRERGRVSLSTKKL 403
             I+  D E+ ++ LS K++
Sbjct: 613 AKIVEVDGEKRKIGLSIKEV 632



 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 31/70 (44%), Positives = 46/70 (65%)
 Frame = -1

Query: 600 GTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVS 421
           G V  L  +GAF++I G++GLLHVS+IS  RV   S +L+ GD +KV I   D+++ +++
Sbjct: 481 GEVRRLTDFGAFVNINGVDGLLHVSEISWGRVEKPSDMLKVGDKIKVYIKDIDKDKKKLA 540

Query: 420 LSTKKLEPTP 391
           LS K L   P
Sbjct: 541 LSIKDLTKDP 550
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>RS1_CHLMU (P38016) 30S ribosomal protein S1 (70 kDa antigen)|
          Length = 570

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           Q+ IG    G V+++  +G F+D+ GI+GLLH++ ++  R+   S +++    L+V+ILS
Sbjct: 216 QITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILS 275

Query: 447 HDRERGRVSLSTKKLEPTPGDMI 379
            D+E+GRV+L  K+ E  P + I
Sbjct: 276 VDKEKGRVALGLKQKEHNPWEDI 298



 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G  V G +  L PYGAFI+I  GI GL+HVS++S    + D + V+  GD ++V++LS  
Sbjct: 305 GKRVRGKIVKLLPYGAFIEIEEGIEGLIHVSEMSWVKNIVDPNEVVNKGDEVEVVVLSIQ 364

Query: 441 RERGRVSLSTKKLEPTPGDMI 379
           ++ G++SL  K+ E  P D I
Sbjct: 365 KDEGKISLGLKQTEHNPWDNI 385



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSH 445
           IG  V   +++L  YGAF+++  GI GL+H+S +S   +V+  S + + G+T++ +ILS 
Sbjct: 391 IGLRVTAEIKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNTVEAVILSV 450

Query: 444 DRERGRVSLSTKKLEPTPGDMI 379
           D+E  +++L  K+L P P D I
Sbjct: 451 DKESKKITLGVKQLTPNPWDEI 472



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVM 457
           +A   +GS + G V  +  +GAF+++  GI GL+HVS++S    A I  +L  GD +   
Sbjct: 473 EAMFPVGSDISGIVTKITAFGAFVELQNGIEGLIHVSKLSDKPFAKIEDILSIGDKVSAK 532

Query: 456 ILSHDRERGRVSLSTKK 406
           ++  D +  +VSLS K+
Sbjct: 533 VIKLDPDHKKVSLSIKE 549
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>RS1_CHLTR (O84100) 30S ribosomal protein S1|
          Length = 569

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           Q+ IG    G V+++  +G F+D+ GI+GLLH++ ++  R+   S +++    L+V+ILS
Sbjct: 216 QITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILS 275

Query: 447 HDRERGRVSLSTKKLEPTPGDMI 379
            D+E+GRV+L  K+ E  P + I
Sbjct: 276 VDKEKGRVALGLKQKEHNPWEDI 298



 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSHD 442
           G  V G +  L PYGAFI+I  GI GL+HVS++S    + D + V+  GD ++V++LS  
Sbjct: 305 GKRVRGKIVKLLPYGAFIEIEEGIEGLIHVSEMSWVKNIVDPNEVVNKGDEVEVVVLSIQ 364

Query: 441 RERGRVSLSTKKLEPTPGDMI 379
           ++ G++SL  K+ +  P D I
Sbjct: 365 KDEGKISLGLKQTKHNPWDNI 385



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISH-DRVADISTVLQPGDTLKVMILSH 445
           IG  V   +++L  YGAF+++  GI GL+H+S +S   +V+  S + + G+T++ +ILS 
Sbjct: 391 IGLRVTAEIKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNTVEAVILSV 450

Query: 444 DRERGRVSLSTKKLEPTPGDMI 379
           D+E  +++L  K+L P P D I
Sbjct: 451 DKESKKITLGVKQLTPNPWDEI 472



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
           +GS + G V  +  +GAF+++  GI GL+HVS++S    A I  VL  GD +   ++  D
Sbjct: 478 VGSDISGVVTKITAFGAFVELQNGIEGLIHVSELSEKPFAKIEDVLSIGDKVSAKVIKLD 537

Query: 441 RERGRVSLSTKKLEPTPGD 385
            +  +VSLS K+     GD
Sbjct: 538 PDHKKVSLSIKEFLVHGGD 556
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>YHGF_ECOLI (P46837) Protein yhgF|
          Length = 773

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G ++ G V ++  +GAF+DIG   +GL+H+S +S+  V D  TV++ GD +KV +L  D 
Sbjct: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710

Query: 438 ERGRVSLSTKKLEPTPGD 385
           +R R++L T +L+  PG+
Sbjct: 711 QRKRIAL-TMRLDEQPGE 727
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>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-5 (EC 3.6.1.-) (Sex determination protein
           mog-5) (Masculinization of germ line protein 5)
          Length = 1200

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGGIN----GLLHVSQISHDRVADISTVLQPGDTLKVMIL 451
           IG +  G V S++ +GAFI + G      GL+H+SQI ++RV  ++ VL+ G+ +KV + 
Sbjct: 233 IGKIYDGRVNSIQSFGAFITLEGFRQKQEGLVHISQIRNERVQTVADVLKRGENVKVKV- 291

Query: 450 SHDRERGRVSLSTKKLEPTPGDMIRNPK 367
            +  E G++SLS K+++   G+ + NP+
Sbjct: 292 -NKIENGKISLSMKEVDQNSGEDL-NPR 317
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>YABR_BACSU (P37560) Hypothetical protein yabR|
          Length = 128

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
           +GS + G +  +  +GAF+++ GG  GL+H+S+++ + V DI+  L+ GD ++V +++ +
Sbjct: 5   VGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVE 64

Query: 441 RERGRVSLSTKKLEPTPGDMIRN---PKLVFEK 352
           ++ G++ LS KK +  P    RN   PK  FE+
Sbjct: 65  KD-GKIGLSIKKAKDRPQARPRNDFRPKESFEQ 96
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>YHGF_NEIMB (Q51152) Hypothetical protein NMB0075|
          Length = 757

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           + L +G ++ G V ++  +GAF+DIG   +GL+H+S +S+  V D   V++ GD +KV +
Sbjct: 635 SDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPREVVKAGDVVKVKV 694

Query: 453 LSHDRERGRVSLSTKKLEPTPG 388
           L  D  R R++L T +L+  PG
Sbjct: 695 LEVDAARKRIAL-TMRLDDEPG 715
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>YHGF_NEIMA (P57072) Hypothetical protein NMA0194|
          Length = 757

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           + L +G ++ G V ++  +GAF+DIG   +GL+H+S +S+  V D   V++ GD +KV +
Sbjct: 635 SDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPREVVKAGDVVKVKV 694

Query: 453 LSHDRERGRVSLSTKKLEPTPG 388
           L  D  R R++L T +L+  PG
Sbjct: 695 LEVDAARKRIAL-TMRLDDEPG 715
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>RS1_HELPY (P56008) 30S ribosomal protein S1|
          Length = 556

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = -1

Query: 606 VLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGR 427
           VLG V  + P+G F++  GI GL+H S+ISH    +     + GD + V  +++D E+ R
Sbjct: 207 VLGVVRQITPFGIFVEAKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAIAYDAEKRR 266

Query: 426 VSLSTKKLEPTPGDMIRN 373
           +SLS K     P + I++
Sbjct: 267 LSLSIKATIEDPWEEIQD 284



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           +G V+ G V +L  +GAF+++GG++GLLH      D+        + GD +KV IL  ++
Sbjct: 375 VGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDVIKVKILKINK 434

Query: 438 ERGRVSLSTKKLEPTP 391
           +  ++SLS K L  +P
Sbjct: 435 KDKKISLSAKHLVTSP 450



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDR-VADISTVLQPGDTLKV 460
           Q +L  G  +   V +++ YG F+DIG  I G LHVS+IS D+ V+  +  L  G  + V
Sbjct: 283 QDKLKPGYAIKVVVSNIEHYGVFVDIGNDIEGFLHVSEISWDKNVSHPNNYLSVGQEIDV 342

Query: 459 MILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIA 313
            I+  D +  R+ +S K+L   P D       VFE   ++  +   ++A
Sbjct: 343 KIIDIDPKNRRLRVSLKQLTNRPFD-------VFESKHQVGDVLEGKVA 384
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>ISPH_FUSNN (Q8RI52) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 827

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 32/100 (32%), Positives = 53/100 (53%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMIL 451
           A L +G +V   V  +  +G  +DI  + G +H+S++S  R+  +S   + GD +K +++
Sbjct: 472 AGLAVGQIVDCVVTEVLDFGLAVDINTLKGFIHISEVSWKRLDKLSDNYKVGDKIKAVVV 531

Query: 450 SHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQI 331
           S D  +  V LS KKLE  P   + N    F+  DE+  I
Sbjct: 532 SLDEAKRNVKLSIKKLEEDPWATVANE---FKVDDEIEGI 568



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
 Frame = -1

Query: 618  IGSVVLGTVESLKPYGAFID-IGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD 442
            +G+ V   ++++  +G FI+ I GI+G +     S + + +I      GD +K  ++  +
Sbjct: 732  VGTTVEKKIKTVADFGLFIELIKGIDGFIPTQFASKEFIKNIRDKFSEGDVVKAQVVEVN 791

Query: 441  RERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQAE 304
            +E  ++ LS KK+E           +  EK +E  QI +   + +E
Sbjct: 792  KETQKIKLSIKKIE-----------IEEEKREEREQIEKYSTSSSE 826



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = -1

Query: 600 GTVESLKPYGAFIDI-GGINGLLHVSQIS-HDRVADISTVLQPGDTLKVMILSHDRERGR 427
           G V  + PYGAF++I  G+ GL+H+S  S   +  +++  ++  + +KV I     E  +
Sbjct: 567 GIVTKVLPYGAFVEIKPGVEGLVHISDFSWTKKKVNVADYVKEREKIKVRITDLHPEDRK 626

Query: 426 VSLSTKKLEPTP 391
           + L  K+L   P
Sbjct: 627 LKLGIKQLVANP 638
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>RS1_HELPJ (Q9ZKF6) 30S ribosomal protein S1|
          Length = 552

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = -1

Query: 606 VLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGR 427
           VLG V  + P+G F+   GI+GL+H S+ISH    +     + GD + V  +++D E+ R
Sbjct: 203 VLGVVRQITPFGIFVKFKGIDGLVHYSEISHKGPVNPEKYYKEGDEVYVKAIAYDEEKRR 262

Query: 426 VSLSTKKLEPTPGDMIRN 373
           +SLS K     P + I++
Sbjct: 263 LSLSIKATIEDPWEEIQD 280



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           +G +V G V +L  +GAF+++GG++GLLH      D+        + GD +KV IL  ++
Sbjct: 371 VGDIVEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDVIKVKILKINK 430

Query: 438 ERGRVSLSTKKLEPTP 391
           +  ++SLS K L  +P
Sbjct: 431 KDKKISLSAKHLVTSP 446



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = -1

Query: 633 QAQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDR-VADISTVLQPGDTLKV 460
           Q +L  G  +   V +++ YG F+DIG  I G LHVS+IS D+ V+  S  L  G  + V
Sbjct: 279 QDKLKPGYAIKVVVSNIEHYGVFVDIGNDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDV 338

Query: 459 MILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIA 313
            I+  D +  R+ +S K+L   P D       VFE   ++  I   ++A
Sbjct: 339 KIIDIDPKNRRLRVSLKQLTNRPFD-------VFESKHQVGDIVEGKVA 380
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>PNP_BUCAP (Q8K9H5) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 707

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +G +  G V  +  +GAFI IG G  GL+H+SQIS+ RV  +S  L     + V +
Sbjct: 617 AEIEVGRIYSGKVTRIVDFGAFISIGIGKEGLVHISQISNKRVEKVSDHLTVDQIISVKV 676

Query: 453 LSHDRERGRVSLSTKKLE 400
           L  DR+ GR+ LS K++E
Sbjct: 677 LEIDRQ-GRLRLSIKEVE 693
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>PNP_ECOLI (P05055) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 711

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +G V  G V  +  +GAF+ IGG   GL+H+SQI+  RV  ++  LQ G  + V +
Sbjct: 617 AEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKV 676

Query: 453 LSHDRERGRVSLSTKK 406
           L  DR+ GR+ LS K+
Sbjct: 677 LEVDRQ-GRIRLSIKE 691
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>PNP_PHOLU (P41121) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase) (CAP87K)
          Length = 709

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +G +  G V  +  +GAF+ IGG   GL+H+SQI+  RV  ++  LQ G    V +
Sbjct: 617 AEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVADYLQVGQETSVKV 676

Query: 453 LSHDRERGRVSLSTKKLEPTPGDMI 379
           L  DR+ GRV LS K  E T G  +
Sbjct: 677 LEIDRQ-GRVRLSIK--EATAGTAV 698
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>PNP_HAEIN (P44584) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 709

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++  G +  G V  L  +GAF+ I G   GL+H+SQI+ +RV  +S  LQ G  + V +
Sbjct: 616 AEVEAGVIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEKVSDYLQVGQEVNVKV 675

Query: 453 LSHDRERGRVSLSTKKLEP 397
           +  DR+ GR+ L+ K L P
Sbjct: 676 VEIDRQ-GRIRLTMKDLAP 693
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>PNP_BUCBP (Q89AF8) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 693

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +GSV  G V  +  +GAF+ IG G  GL+H+SQI+H RV  +S  L+    + V +
Sbjct: 617 AEVEVGSVYTGKVTRIVDFGAFVSIGIGKEGLVHISQIAHKRVDKVSDHLRLHQEIFVKV 676

Query: 453 LSHDRERGRVSLSTK 409
           L  DR+ GR+ LS K
Sbjct: 677 LEVDRQ-GRLRLSIK 690
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>IF2A_METJA (Q57581) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 266

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDI---GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G +V+GTV+ +KPYGAF+++    G  G++H+S+++   V +I   ++ G  +   +L  
Sbjct: 12  GDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVVAKVLRV 71

Query: 444 DRERGRVSLSTKKL 403
           D  +G + LS K++
Sbjct: 72  DERKGHIDLSLKRV 85
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>PNP_BUCAI (P57454) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 707

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +G +  G V  +  +GAF+ IG G  GL+H+SQIS  RV  +S  L+    + V +
Sbjct: 617 AEIEVGRIYSGKVTRIVDFGAFVSIGLGKEGLVHISQISDKRVDKVSNHLKIDQIISVKV 676

Query: 453 LSHDRERGRVSLSTKKLE 400
           L  DR+ GR+ LS K+++
Sbjct: 677 LEIDRQ-GRLRLSIKEID 693
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>PNP_YEREN (O34275) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 706

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 630 AQLGIGSVVLGTVESLKPYGAFIDIGG-INGLLHVSQISHDRVADISTVLQPGDTLKVMI 454
           A++ +  +  G V  +  +GAF+ IGG   GL+H+SQI+  RV  ++  LQ G  + V +
Sbjct: 617 AEIEVNRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVDKVTDYLQMGQEVPVKV 676

Query: 453 LSHDRERGRVSLSTKK 406
           +  DR+ GR+ LS K+
Sbjct: 677 IEVDRQ-GRIRLSMKE 691
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>IF2A_AERPE (Q9YF02) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 277

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFI---DIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILS 448
           +G +V+GTV+ +  YGA++   + GG+   L  S+I+   V +I  VL+P   + V ++ 
Sbjct: 21  VGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKVIR 80

Query: 447 HDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
             ++RG+V +S K++     D  +  K++F K    A    + IA+
Sbjct: 81  VYKKRGQVDVSLKRVM----DSEKKRKMMFYKRYLKAATLVELIAE 122
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>Y568_HAEIN (P71353) Hypothetical protein HI0568|
          Length = 762

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G ++ GTV ++  +GAF+DIG   +GL+H+S +S   V D   V++ G+ +KV +L  D 
Sbjct: 651 GMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDV 710

Query: 438 ERGRVSLSTK 409
            R R++L+ +
Sbjct: 711 PRKRIALTMR 720
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>IF2A_PYRKO (Q5JE49) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 275

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG---GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G  V+ TV+++ PYGAF+ +    G  G +H+S+++   V +I   L+ G  +   ++  
Sbjct: 12  GEFVVATVKNIHPYGAFLTLDEYPGKEGFMHISEVAPTWVKNIRDYLKEGQKIVAKVIRV 71

Query: 444 DRERGRVSLSTKKL 403
           D E+G + LS K++
Sbjct: 72  DPEKGHIDLSLKRV 85
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>RRP5_YEAST (Q05022) rRNA biogenesis protein RRP5|
          Length = 1729

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -1

Query: 615  GSVVLGTVESLKPYGAFIDIGG---INGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
            G V  GT++S+  +G F+ +     + GL H+++I+  +  D+S +   GD +K ++L  
Sbjct: 1265 GDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAIVLKT 1324

Query: 444  DRERGRVSLSTK 409
            + E+ ++SLS K
Sbjct: 1325 NPEKKQISLSLK 1336
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>TEX_BORPE (Q45388) Protein tex|
          Length = 791

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G V+ G V ++  +GAF+DIG   +GL+H+S ++   V D   V++ G T+ V +L  D 
Sbjct: 670 GMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTVTVKVLEVDV 729

Query: 438 ERGRVSLSTK 409
            R RV+L+ +
Sbjct: 730 ARKRVALTMR 739
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>IF2A_PYRFU (Q8U1R5) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 275

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG---GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G +V+ TV+ +  YGAF+D+    G  G +H+S+++   V +I   L+ G  +   ++  
Sbjct: 12  GELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKVVAKVIRV 71

Query: 444 DRERGRVSLSTKKL 403
           D ++G + LS +++
Sbjct: 72  DPKKGHIDLSLRRV 85
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>IF2A_ARCFU (O29723) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 267

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG---GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G +V+GTV+ +  +GAF+ +    G  G++H+S+++   + DI   ++ G  +   +L  
Sbjct: 17  GEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQKVICKVLDV 76

Query: 444 DRERGRVSLSTK 409
           + +RG + LS K
Sbjct: 77  NPKRGHIDLSIK 88
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>IF2A_METKA (Q8TY86) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 267

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG---GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G +V+ TVE ++ +GAF+ +    G++G +H+S+++   V +I   ++ G  +   ++  
Sbjct: 12  GEIVMATVERVEDHGAFVTLDEYPGVDGYIHISEVASGWVKNIRDYVKEGQKVVAKVIRV 71

Query: 444 DRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
           + +R   +LS +K+     D  R  KL   K ++ A+   +  A+
Sbjct: 72  NPKRKYANLSLRKVT----DHQRKEKLKEWKREQRAEKLLEMAAE 112
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>RPOE_SULAC (P39466) DNA-directed RNA polymerase subunit E (EC 2.7.7.6)|
          Length = 183

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADIST-----------VLQPGD 472
           I  V+ G V  +  YG ++++G ++GL+H+SQI+ D +   S             +Q GD
Sbjct: 81  IHEVIEGEVSQVDNYGVYVNMGPVDGLVHISQITDDNLKFDSNRGILIGEKSKKSIQKGD 140

Query: 471 TLKVMILSHDRERGRV 424
            ++ MI+S     GR+
Sbjct: 141 RVRAMIISASMSSGRL 156
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>NO40_MOUSE (Q9ESX4) Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC|
           domain-containing protein 7) (Putative S1 RNA-binding
           domain protein) (PS1D protein)
          Length = 241

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
 Frame = -1

Query: 612 SVVLGTVESLKPYGAFIDIGGI--NGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD- 442
           ++  G V  +  YGAFI I G    GL+H + +S  RV   S ++  GD + V ++  + 
Sbjct: 17  TIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREM 76

Query: 441 -RERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
             +R +VSLS K +    G  +    +V E+ +   + F+    Q
Sbjct: 77  KNDRIKVSLSMKVVNQGTGKDLDPNNVVIEQEERRRRSFQDYTGQ 121
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>NO40_HUMAN (Q9NP64) Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC|
           domain-containing protein 7) (Putative S1 RNA binding
           domain protein) (PS1D protein) (Pnn-interacting
           nucleolar protein)
          Length = 241

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
 Frame = -1

Query: 612 SVVLGTVESLKPYGAFIDIGGI--NGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD- 442
           ++  G V  +  YGAFI I G    GL+H + +S  RV   S ++  GD + V ++  + 
Sbjct: 17  TIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREM 76

Query: 441 -RERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
             +R +VSLS K +    G  +    ++ E+ +   + F+    Q
Sbjct: 77  KNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQ 121
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>IF2A_METTH (O27363) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 262

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFI---DIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSH 445
           G +V+GTV  +  YGAF    +  G    +H+S++S   V +I   ++    +   +L  
Sbjct: 15  GELVVGTVHKVLNYGAFATLEEYPGKEAFIHISEVSSGWVKNIRDFVRENQKIVARVLRV 74

Query: 444 DRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQ 310
           +  +G V +S K++        R  K+   K ++ A+ F +  A+
Sbjct: 75  NPRKGHVDVSMKRIREDQ----RTKKIQAWKIEQKAEKFLELAAR 115
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>RPOE1_METJA (Q57840) DNA-directed RNA polymerase subunit E' (EC 2.7.7.6)|
          Length = 187

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 16/84 (19%)
 Frame = -1

Query: 609 VVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVA-----------DISTVLQPGDTLK 463
           ++ G V  +  +G+F+ +G ++GL+HVSQI  D V+           +   VL+ GD ++
Sbjct: 84  LIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYVR 143

Query: 462 VMI----LSHDRERG-RVSLSTKK 406
             I    L  +R+RG +++L+ ++
Sbjct: 144 ARIVAISLKAERKRGSKIALTMRQ 167
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>RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death protein 11)|
          Length = 1871

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -1

Query: 624  LGIGSVVLGTVESLKPYGAFIDI-GGINGLLHVSQISHDRVADIS--TVLQPGDTLKVMI 454
            L IG +V GTV+S+KP    + +  GI G +H S I  D     S  T L+ G T+   +
Sbjct: 1033 LSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKTVTARV 1092

Query: 453  L 451
            +
Sbjct: 1093 I 1093



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -1

Query: 615 GSVVLGTVESLKPYGAFIDIG-GINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDR 439
           G+VV GTV ++K YG  + +G  + GL+    ++   + +       GD +K  +L  D 
Sbjct: 453 GAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVLLCDP 512

Query: 438 ERGRVSLSTKK 406
           E  ++ ++ KK
Sbjct: 513 EAKKLMMTLKK 523
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>RNR_BUCAP (Q8K917) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein|
           homolog)
          Length = 726

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
 Frame = -1

Query: 627 QLGIGSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQP-------- 478
           Q  IG V+ G + ++  +G F+ +    I+GL+H++ +  D     S  L+         
Sbjct: 638 QKKIGDVLTGVISNVTSFGFFVRLNQFFIDGLVHIATLIDDYYYFDSIGLKLIGKSSKNT 697

Query: 477 ---GDTLKVMILSHDRERGRVSLS 415
              GDTLKV ++S +    ++ LS
Sbjct: 698 YCLGDTLKVKVISVNLNERKIELS 721
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>PCCA_CAEBR (Q612F5) Propionyl-CoA carboxylase alpha chain, mitochondrial|
           precursor (EC 6.4.1.3) (PCCase alpha subunit)
           (Propanoyl-CoA:carbon dioxide ligase alpha subunit)
          Length = 738

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 20/82 (24%)
 Frame = -1

Query: 573 GAFIDIGG------------INGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD---- 442
           G  IDI G            +NG    +QI   R  +I TVL  G   KV +L       
Sbjct: 598 GKVIDISGNLSLSLPVNSIEVNGEHITTQIVGKRAGEI-TVLYKGTPFKVQVLPEQAVKY 656

Query: 441 ----RERGRVSLSTKKLEPTPG 388
               +E+ +V LST  L P PG
Sbjct: 657 LQYMKEKAKVDLSTVVLSPMPG 678
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>RNR_BUCAI (P57628) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein|
           homolog)
          Length = 731

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
 Frame = -1

Query: 618 IGSVVLGTVESLKPYGAFIDIGG--INGLLHVSQISHDRVADISTVLQP----------- 478
           IG ++ G + ++  +G F+ +    I+GL+H++ ++ D     S  L+            
Sbjct: 646 IGCILNGVISNVTTFGFFVRLNQFFIDGLVHINSLNDDYYYFDSLGLKLIGKSTKNTYCL 705

Query: 477 GDTLKVMILSHDRERGRVSLSTKK 406
           GD LKV ++S +    ++ LS  K
Sbjct: 706 GDALKVKVISVNLNEKKIELSLYK 729
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>VG05_BPT4 (P16009) Tail-associated lysozyme (EC 3.2.1.17) (Protein Gp5)|
          Length = 575

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 636 SQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLL 535
           S A  GIG  V G VE  + YG F+D    NG++
Sbjct: 63  SAAMSGIGGSVTGPVEGTRVYGHFLDKWKTNGIV 96
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>DCR1C_BRARE (Q5RGE5) Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C|
           protein)
          Length = 639

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = -1

Query: 534 HVSQISHDRVADISTVLQPGDTLKVMILSHDRER-------GRVSLSTKKLEPTPGDMIR 376
           H+S    + ++ + T++   D  K   L H  E         +VS S  +L PTPG  + 
Sbjct: 557 HISDAGTESLSQVDTIMVQEDHSKACNLQHKTEEAAELKSDSQVS-SDFELPPTPGSKVP 615

Query: 375 NPKLVFEKADEMAQIFRQRIAQAEAMAR 292
            P       +++ +++R+  A  + +AR
Sbjct: 616 QP-------EDLKELYRKLAAGEDVVAR 636
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>GLYA1_BURTA (Q2SYS4) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine|
           methylase 1) (SHMT 1)
          Length = 415

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -1

Query: 489 VLQPGDTLKVMILSHD---RERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQR 319
           +L+PGDT+  M L+H         V++S K        +  N  + +E AD++A   + +
Sbjct: 110 MLKPGDTIMGMSLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYEAADKLAHEHKPK 169

Query: 318 IAQAEAMARADMLRFQ 271
           +  A A A A  + F+
Sbjct: 170 LIVAGASAFALKIDFE 185
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>Y830_CORDI (Q6NIE7) Hypothetical transport protein DIP0830|
          Length = 541

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -1

Query: 549 INGLL--HVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSL 418
           ++G+L   V +  HD VA   TVLQ GD ++V + +HDR +   +L
Sbjct: 307 LSGILITRVRRGDHDHVATPETVLQLGDRVRV-VAAHDRMKSVTAL 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,674,586
Number of Sequences: 219361
Number of extensions: 1930169
Number of successful extensions: 5422
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 5182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5392
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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