>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08,
            complete sequence
          Length = 152527

 Score =  135 bits (68), Expect = 7e-29
 Identities = 164/196 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttgattttgaaaaactgatgcaacaatctatgaacttccccatagttttgaccgcaagtg 60
            |||| |||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||  
Sbjct: 7502 ttgagtttgaagaactggtgcaacaatctatgaacctctccataattttgagcacaagca 7561

                                                                        
Query: 61   agtcgtgccttgatccactggggtagcttttcaacagggcaggagaaacccctgcttgat 120
            |||||||  || ||||| |||||||| || |||  |||| | ||| ||| |||| |||||
Sbjct: 7562 agtcgtgtttttatccattggggtagtttgtcagtaggggaagaggaactcctgtttgat 7621

                                                                        
Query: 121  gaggtgtgtgcgtaacgtgagtcaaccaacagcattgcagcatagtcatttacatgcctg 180
            || || || || ||||||||||||||||| |||||||||||||| |||||| |||| |||
Sbjct: 7622 gaagtatgggcataacgtgagtcaaccaatagcattgcagcataatcatttgcatgtctg 7681

                            
Query: 181  attgctctacctgcaa 196
            |||||||| |||||||
Sbjct: 7682 attgctcttcctgcaa 7697

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 7e-29
 Identities = 164/196 (83%)
 Strand = Plus / Plus

                                                                           
Query: 1       ttgattttgaaaaactgatgcaacaatctatgaacttccccatagttttgaccgcaagtg 60
               |||| |||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||  
Sbjct: 7269247 ttgagtttgaagaactggtgcaacaatctatgaacctctccataattttgagcacaagca 7269306

                                                                           
Query: 61      agtcgtgccttgatccactggggtagcttttcaacagggcaggagaaacccctgcttgat 120
               |||||||  || ||||| |||||||| || |||  |||| | ||| ||| |||| |||||
Sbjct: 7269307 agtcgtgtttttatccattggggtagtttgtcagtaggggaagaggaactcctgtttgat 7269366

                                                                           
Query: 121     gaggtgtgtgcgtaacgtgagtcaaccaacagcattgcagcatagtcatttacatgcctg 180
               || || || || ||||||||||||||||| |||||||||||||| |||||| |||| |||
Sbjct: 7269367 gaagtatgggcataacgtgagtcaaccaatagcattgcagcataatcatttgcatgtctg 7269426

                               
Query: 181     attgctctacctgcaa 196
               |||||||| |||||||
Sbjct: 7269427 attgctcttcctgcaa 7269442

>ref|XM_476186.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2538

 Score =  127 bits (64), Expect = 2e-26
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgattttgaaaaactgatgcaacaatctatgaacttccccatagttttgaccgcaagtg 60
            |||| |||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||  
Sbjct: 2522 ttgagtttgaagaactggtgcaacaatctatgaacctctccataattttgagcacaagca 2463

                                                                        
Query: 61   agtcgtgccttgatccactggggtagcttttcaacagggcaggagaaacccctgcttgat 120
            |||||||  || ||||| |||||||| || |||  |||| | ||| ||| |||| |||||
Sbjct: 2462 agtcgtgtttttatccattggggtagtttgtcagtaggggaagaggaactcctgtttgat 2403

                                                                        
Query: 121  gaggtgtgtgcgtaacgtgagtcaaccaacagcattgcagcatagtcatttacatgcctg 180
            || || || || ||||||||||||||||| |||||||||||||| |||||| |||| |||
Sbjct: 2402 gaagtatgggcataacgtgagtcaaccaatagcattgcagcataatcatttgcatgtctg 2343

                    
Query: 181  attgctct 188
            ||||||||
Sbjct: 2342 attgctct 2335

>dbj|AK102822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108P05, full
            insert sequence
          Length = 3161

 Score =  127 bits (64), Expect = 2e-26
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgattttgaaaaactgatgcaacaatctatgaacttccccatagttttgaccgcaagtg 60
            |||| |||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||  
Sbjct: 2687 ttgagtttgaagaactggtgcaacaatctatgaacctctccataattttgagcacaagca 2628

                                                                        
Query: 61   agtcgtgccttgatccactggggtagcttttcaacagggcaggagaaacccctgcttgat 120
            |||||||  || ||||| |||||||| || |||  |||| | ||| ||| |||| |||||
Sbjct: 2627 agtcgtgtttttatccattggggtagtttgtcagtaggggaagaggaactcctgtttgat 2568

                                                                        
Query: 121  gaggtgtgtgcgtaacgtgagtcaaccaacagcattgcagcatagtcatttacatgcctg 180
            || || || || ||||||||||||||||| |||||||||||||| |||||| |||| |||
Sbjct: 2567 gaagtatgggcataacgtgagtcaaccaatagcattgcagcataatcatttgcatgtctg 2508

                    
Query: 181  attgctct 188
            ||||||||
Sbjct: 2507 attgctct 2500

>emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in linkage group 14,
             complete sequence
          Length = 161413

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     ttgattttgaaaaactgatgcaacaa 26
             ||||| ||||||||||||||||||||
Sbjct: 71847 ttgatgttgaaaaactgatgcaacaa 71822

>emb|BX547992.4| Zebrafish DNA sequence from clone DKEY-225I9 in linkage group 3, complete
              sequence
          Length = 181320

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1      ttgattttgaaaaactgatgcaacaa 26
              ||||| ||||||||||||||||||||
Sbjct: 131523 ttgatattgaaaaactgatgcaacaa 131498

>emb|CR848749.13| Zebrafish DNA sequence from clone CH211-147F13 in linkage group 15,
              complete sequence
          Length = 161648

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1      ttgattttgaaaaactgatgcaacaa 26
              ||||| ||||||||||||||||||||
Sbjct: 148514 ttgatgttgaaaaactgatgcaacaa 148489

>ref|XM_463426.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 555

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 ggagaaacccctgcttgatgaggtg 126
           |||||| ||||||||||||||||||
Sbjct: 6   ggagaaccccctgcttgatgaggtg 30

>emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in linkage group 2, complete
              sequence
          Length = 231384

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      ttgattttgaaaaactgatgc 21
              |||||||||||||||||||||
Sbjct: 148488 ttgattttgaaaaactgatgc 148468

>emb|BX571897.12| Zebrafish DNA sequence from clone RP71-87M8 in linkage group 6,
             complete sequence
          Length = 149415

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ttgattttgaaaaactgatgc 21
             |||||||||||||||||||||
Sbjct: 35559 ttgattttgaaaaactgatgc 35539

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 102      ggagaaacccctgcttgatgaggtg 126
                |||||| ||||||||||||||||||
Sbjct: 28871919 ggagaaccccctgcttgatgaggtg 28871895

>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   ggagaaacccctgcttgatgaggtg 126
             |||||| ||||||||||||||||||
Sbjct: 89962 ggagaaccccctgcttgatgaggtg 89938

>emb|BX001045.11| Mouse DNA sequence from clone RP23-474E2 on chromosome X, complete
             sequence
          Length = 133817

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   taaagcaacaatagttttaag 242
             |||||||||||||||||||||
Sbjct: 77554 taaagcaacaatagttttaag 77534

>gb|BC075974.1| Danio rerio cDNA clone IMAGE:7053220, partial cds
          Length = 1755

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    ttgattttgaaaaactgatgcaac 24
            ||||| ||||||||||||||||||
Sbjct: 1131 ttgatgttgaaaaactgatgcaac 1154

>gb|AY176327.1| Staphylococcus phage K, complete genome
          Length = 127395

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   caacaatagttttaagactt 246
             ||||||||||||||||||||
Sbjct: 87078 caacaatagttttaagactt 87059

>emb|BX957362.26| Zebrafish DNA sequence from clone CH211-122F10 in linkage group 7,
             complete sequence
          Length = 191638

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 27272 ttgatgttgaaaaactgatgcaac 27249

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 7       ttgaaaaactgatgcaacaa 26
               ||||||||||||||||||||
Sbjct: 2318854 ttgaaaaactgatgcaacaa 2318835

>emb|CR392012.7| Zebrafish DNA sequence from clone CH211-253D24 in linkage group 2,
             complete sequence
          Length = 97633

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 39362 ttgatgttgaaaaactgatgcaac 39339

>emb|Z81127.1|CET22G5 Caenorhabditis elegans Cosmid T22G5, complete sequence
          Length = 22254

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 107  aacccctgcttgatgaggtgtgtg 130
            |||| |||||||||||||||||||
Sbjct: 3322 aaccgctgcttgatgaggtgtgtg 3299

>emb|CR790367.12| Zebrafish DNA sequence from clone DKEY-262C19 in linkage group 13,
            complete sequence
          Length = 11340

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    ttgattttgaaaaactgatgcaac 24
            ||||| ||||||||||||||||||
Sbjct: 6271 ttgatgttgaaaaactgatgcaac 6294



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    ttgattttgaaaaactgatgcaac 24
            ||||| ||||||||||||||||||
Sbjct: 2555 ttgatgttgaaaaactgatgcaac 2578

>emb|BX545856.10| Zebrafish DNA sequence from clone DKEY-216E24 in linkage group 9,
             complete sequence
          Length = 209295

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 17386 ttgatgttgaaaaactgatgcaac 17363

>emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 in linkage group 13,
             complete sequence
          Length = 171465

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 17417 ttgatgttgaaaaactgatgcaac 17394

>emb|AL591399.3| Zebrafish DNA sequence from clone BUSM1-172D23 in linkage group 2
             Contains 24 TCR-alpha V segments (II-85 to II-108) two of
             which are pseudogenes (II-92 and II-104), 3 C segments, 13
             J segments and a CpG island, complete sequence
          Length = 97774

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 16807 ttgatgttgaaaaactgatgcaac 16784

>emb|BX927222.8| Zebrafish DNA sequence from clone CH211-256M12 in linkage group 16,
             complete sequence
          Length = 154714

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 49064 ttgatgttgaaaaactgatgcaac 49041

>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete
              sequence
          Length = 241708

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      ttgattttgaaaaactgatgcaac 24
              ||||| ||||||||||||||||||
Sbjct: 238644 ttgatgttgaaaaactgatgcaac 238621

>emb|BX323590.8| Zebrafish DNA sequence from clone CH211-42I9 in linkage group 1,
             complete sequence
          Length = 178876

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 97537 ttgatgttgaaaaactgatgcaac 97560

>gb|AY954969.1| Bacteriophage G1, complete genome
          Length = 138715

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   caacaatagttttaagactt 246
             ||||||||||||||||||||
Sbjct: 52256 caacaatagttttaagactt 52237

>emb|AL928946.17| Zebrafish DNA sequence from clone CH211-265D20 in linkage group 20,
             complete sequence
          Length = 157379

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 92814 ttgatgttgaaaaactgatgcaac 92791

>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14,
             complete sequence
          Length = 238499

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 91999 ttgatgttgaaaaactgatgcaac 92022

>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence
          Length = 158673

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ttgattttgaaaaactgatgcaac 24
             ||||| ||||||||||||||||||
Sbjct: 95556 ttgatgttgaaaaactgatgcaac 95533

>emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 in linkage group 10,
              complete sequence
          Length = 176986

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      ttgattttgaaaaactgatgcaac 24
              ||||| ||||||||||||||||||
Sbjct: 112312 ttgatgttgaaaaactgatgcaac 112335

>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
              complete sequence
          Length = 180576

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      ttgattttgaaaaactgatgcaac 24
              ||||| ||||||||||||||||||
Sbjct: 111114 ttgatgttgaaaaactgatgcaac 111091


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,230,841
Number of Sequences: 3902068
Number of extensions: 2230841
Number of successful extensions: 40816
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40743
Number of HSP's gapped (non-prelim): 73
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)