ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10m21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1114 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 781 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 96 2e-16
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 96 2e-16
7ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 64 6e-07
8emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 64 6e-07
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
10emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 60 9e-06
11dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
12ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
13emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 50 0.008
14dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
15dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
16gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.008
17gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.008
18gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.13
19emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 44 0.52
20gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.1
21ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.1
22dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.1
23gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.1
24dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.1
25gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.1
26gb|AC005200.1| Homo sapiens chromosome 5, P1 clone 793c5 (LBNL H... 40 8.2
27ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
28ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
29ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
30ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
31gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.2
32gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.2
33gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosom... 40 8.2
34emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, comp... 40 8.2
35emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 i... 40 8.2
36emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.2
37gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome... 40 8.2
38gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 8.2
39gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 8.2
40dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
41dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
42dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
43dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.2
44gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, com... 40 8.2
45gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, com... 40 8.2
46gb|AC090365.7| Homo sapiens chromosome 18, clone RP11-885L22, co... 40 8.2
47gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, compl... 40 8.2
48gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, comp... 40 8.2
49gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, com... 40 8.2
50gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, comple... 40 8.2
51gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 40 8.2
52dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-m... 40 8.2
53gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G... 40 8.2
54gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 8.2
55emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.2
56emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 8.2
57emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-6... 40 8.2
58emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1... 40 8.2
59gb|AE015927.1| Clostridium tetani E88, complete genome 40 8.2
60gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 8.2
61dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 8.2
62gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 8.2
63emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 8.2
64gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosom... 40 8.2
65emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chr... 40 8.2 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1114 bits (562), Expect = 0.0
 Identities = 589/600 (98%), Gaps = 1/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttatgatagaaataataaaatgaaaatn-taaatgagcacgtgagctagcagctctta 59
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 954 ttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctctta 895

                                                                       
Query: 60  ttcgggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggtac 119
           |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 894 ttcgggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggtac 835

                                                                       
Query: 120 gtggatgctacttggtgaactcaagagcgtnaaagttgaagaatatgtaggttttcttga 179
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 834 gtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttga 775

                                                                       
Query: 180 tgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgct 715

                                                                       
Query: 240 ttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtga 655

                                                                       
Query: 300 gagacnagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttg 359
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttg 595

                                                                       
Query: 360 ggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcg 535

                                                                       
Query: 420 tgatccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagcca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgatccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagcca 475

                                                                       
Query: 480 catgttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 catgttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttga 415

                                                                       
Query: 540 tgccggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccac 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgccggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccac 355
to top
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  781 bits (394), Expect = 0.0
 Identities = 421/432 (97%), Gaps = 1/432 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttttatgatagaaataataaaatgaaaatn-taaatgagcacgtgagctagcagctctta 59
            |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 4857 ttttatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctctta 4798

                                                                        
Query: 60   ttcgggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggtac 119
            |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 4797 ttcgggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggtac 4738

                                                                        
Query: 120  gtggatgctacttggtgaactcaagagcgtnaaagttgaagaatatgtaggttttcttga 179
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4737 gtggatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttga 4678

                                                                        
Query: 180  tgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgct 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4677 tgccaccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgct 4618

                                                                        
Query: 240  ttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtga 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4617 ttgctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtga 4558

                                                                        
Query: 300  gagacnagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttg 359
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4557 gagacgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttg 4498

                                                                        
Query: 360  ggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4497 ggagagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcg 4438

                        
Query: 420  tgatccactgca 431
            ||||||||||||
Sbjct: 4437 tgatccactgca 4426



 Score =  216 bits (109), Expect = 6e-53
 Identities = 109/109 (100%)
 Strand = Plus / Minus

                                                                        
Query: 491  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                                                             
Query: 551  tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccac 599
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccac 3542



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 427  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 487  gactcctg 494
            ||||||||
Sbjct: 3850 gactcctg 3843
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 184     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 243
               ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 5374675 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374616

                                                               
Query: 244     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 291
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374615 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 514     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273

                           
Query: 574     ccctagggtgga 585
               ||| ||||||||
Sbjct: 5364272 ccccagggtgga 5364261



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 126     gctacttggtgaactcaagagcgtnaaagttgaagaatatgtaggttttcttgatgccac 185
               |||||||  |||||||||| ||||  ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 186     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 245
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 246     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 294
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 427     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 486
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 514     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101

                           
Query: 574     ccctagggtgga 585
               ||| ||||||||
Sbjct: 5172100 ccccagggtgga 5172089
to top
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 184   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 243
             ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 46742 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 46683

                                                             
Query: 244   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 291
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46682 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 46635



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                         
Query: 514   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
             ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340

                         
Query: 574   ccctagggtgga 585
             ||| ||||||||
Sbjct: 36339 ccccagggtgga 36328
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 184     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 243
               ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 5374664 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374605

                                                               
Query: 244     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 291
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 514     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262

                           
Query: 574     ccctagggtgga 585
               ||| ||||||||
Sbjct: 5364261 ccccagggtgga 5364250



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 126     gctacttggtgaactcaagagcgtnaaagttgaagaatatgtaggttttcttgatgccac 185
               |||||||  |||||||||| ||||  ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 186     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 245
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 246     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 294
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 427     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 486
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 514     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083

                           
Query: 574     ccctagggtgga 585
               ||| ||||||||
Sbjct: 5172082 ccccagggtgga 5172071
to top
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                         
Query: 184   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 243
             ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 91133 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 91192

                                                             
Query: 244   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 291
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91193 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 91240



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 514    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
              ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535

                          
Query: 574    ccctagggtgga 585
              ||| ||||||||
Sbjct: 101536 ccccagggtgga 101547
to top
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 515 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 574
           |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618

                               
Query: 575 cctagggtggagccggtgcc 594
            | ||||||| |||||||||
Sbjct: 617 tccagggtggcgccggtgcc 598
to top
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 515    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 574
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547

                                  
Query: 575    cctagggtggagccggtgcc 594
               | ||||||| |||||||||
Sbjct: 103546 tccagggtggcgccggtgcc 103527
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 515    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 574
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727

                                  
Query: 575    cctagggtggagccggtgcc 594
               | ||||||| |||||||||
Sbjct: 307726 tccagggtggcgccggtgcc 307707



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 514     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
               ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525

                                    
Query: 574     ccctagggtggagccggtgcc 594
               | | ||||||| |||||||||
Sbjct: 5127524 ctccagggtggcgccggtgcc 5127504
to top
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 126   gctacttggtgaactcaagagcgtnaaagttgaagaatatgtaggttttcttgatgccac 185
             |||||||  |||||||||| ||||  ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 186   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 245
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 246   ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 294
             |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 514   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
             |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498

                         
Query: 574   ccctagggtgga 585
             ||| ||||||||
Sbjct: 91499 ccccagggtgga 91510



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 427   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 486
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
to top
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full
           insert sequence
          Length = 1233

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 518 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 577
           ||||||||||||||  |||| | |||||| |||| ||||||| | || ||||||||| | 
Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625

                            
Query: 578 agggtggagccggtgcc 594
           ||||||| |||||||||
Sbjct: 624 agggtggcgccggtgcc 608
to top
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 514 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688

                                
Query: 574 ccctagggtggagccggtgcc 594
           | | ||||||| |||||||||
Sbjct: 687 ctccagggtggcgccggtgcc 667
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                          
Query: 514    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
              ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798

                                   
Query: 574    ccctagggtggagccggtgcc 594
              | | ||||||| |||||||||
Sbjct: 103797 ctccagggtggcgccggtgcc 103777
to top
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full
           insert sequence
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 514 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714

                                
Query: 574 ccctagggtggagccggtgcc 594
           | | ||||||| |||||||||
Sbjct: 713 ctccagggtggcgccggtgcc 693
to top
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full
           insert sequence
          Length = 1365

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 514 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 573
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701

                                
Query: 574 ccctagggtggagccggtgcc 594
           | | ||||||| |||||||||
Sbjct: 700 ctccagggtggcgccggtgcc 680
to top
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 515  atgacatgaggcaggtcatagttgatgcc 543
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
to top
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 515 atgacatgaggcaggtcatagttgatgcc 543
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
to top
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 513 cgatgacatgaggcaggtcatagttgatgcc 543
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
to top
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     ttttatgatagaaataataaaa 22
             ||||||||||||||||||||||
Sbjct: 96149 ttttatgatagaaataataaaa 96170
to top
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 461    tcatacatatctccagccacatgtt 485
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784
to top
>ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical protein (PB108243.00.0)
           partial mRNA
          Length = 634

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 1   ttttatgatagaaataataaaatgaaaat 29
           |||||||| ||| ||||||||||||||||
Sbjct: 111 ttttatgaaagatataataaaatgaaaat 83
to top
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 461  tcatacatatctccagccacatgtt 485
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048
to top
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 461   tcatacatatctccagccacatgtt 485
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975
to top
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 2    tttatgatagaaataataaaa 22
            |||||||||||||||||||||
Sbjct: 9619 tttatgatagaaataataaaa 9639
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 153    agttgaagaatatgtaggttttctt 177
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
to top
>gb|AC005200.1| Homo sapiens chromosome 5, P1 clone 793c5 (LBNL H57), complete sequence
          Length = 79305

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ttttatgatagaaataataa 20
             ||||||||||||||||||||
Sbjct: 13493 ttttatgatagaaataataa 13512
to top
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 ctggaagagggaggccttgg 511
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 gagggaggccttgggcgatg 517
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 ctggaagagggaggccttgg 511
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 gagggaggccttgggcgatg 517
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete
              sequence
          Length = 208661

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     agaaataataaaatgaaaat 29
              ||||||||||||||||||||
Sbjct: 130171 agaaataataaaatgaaaat 130152
to top
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ttgaagagcacaaacatgat 267
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
to top
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete
             sequence
          Length = 150375

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tagaaataataaaatgaaaa 28
             ||||||||||||||||||||
Sbjct: 54063 tagaaataataaaatgaaaa 54044
to top
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence
          Length = 25359

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gaactcgtcgtcgttaagca 413
             ||||||||||||||||||||
Sbjct: 23437 gaactcgtcgtcgttaagca 23418
to top
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21,
            complete sequence
          Length = 110730

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    atagaaataataaaatgaaa 27
            ||||||||||||||||||||
Sbjct: 6531 atagaaataataaaatgaaa 6550
to top
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    tggcaaactccttctccgtc 232
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence
          Length = 226483

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tagaaataataaaatgaaaa 28
             ||||||||||||||||||||
Sbjct: 23725 tagaaataataaaatgaaaa 23706
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    aaacatgatgatatccaagg 278
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
to top
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    acaaacatgatgatatccaa 276
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
to top
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ttttgggagagcgttgtggc 374
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ttttgggagagcgttgtggc 374
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ttttgggagagcgttgtggc 374
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ttttgggagagcgttgtggc 374
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence
          Length = 170284

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      gatagaaataataaaatgaa 26
              ||||||||||||||||||||
Sbjct: 152801 gatagaaataataaaatgaa 152820
to top
>gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, complete sequence
          Length = 146286

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    aataataaaatgaaaatntaaat 35
             ||||||||||||||||| |||||
Sbjct: 16579 aataataaaatgaaaatttaaat 16601
to top
>gb|AC090365.7| Homo sapiens chromosome 18, clone RP11-885L22, complete sequence
          Length = 125792

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 13    aataataaaatgaaaatntaaat 35
             ||||||||||||||||| |||||
Sbjct: 35428 aataataaaatgaaaatttaaat 35406
to top
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence
          Length = 160672

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ttttatgatagaaataataa 20
             ||||||||||||||||||||
Sbjct: 23672 ttttatgatagaaataataa 23691
to top
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence
          Length = 161619

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gatagaaataataaaatgaa 26
             ||||||||||||||||||||
Sbjct: 41177 gatagaaataataaaatgaa 41196
to top
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence
          Length = 204567

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     agaaataataaaatgaaaat 29
              ||||||||||||||||||||
Sbjct: 124180 agaaataataaaatgaaaat 124199
to top
>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    agaaataataaaatgaaaat 29
             ||||||||||||||||||||
Sbjct: 79570 agaaataataaaatgaaaat 79589
to top
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     agaaataataaaatgaaaat 29
              ||||||||||||||||||||
Sbjct: 208362 agaaataataaaatgaaaat 208381
to top
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase,
           complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 440 gcatctccagtgggtatactctcatacatatctcca 475
           ||||||||| |||| | ||||||| |||||||||||
Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
to top
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence
          Length = 173844

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 6    tgatagaaataataaaatgaaaat 29
            ||||| ||||||||||||||||||
Sbjct: 3084 tgataaaaataataaaatgaaaat 3061
to top
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 498  gagggaggccttgggcgatg 517
            ||||||||||||||||||||
Sbjct: 5744 gagggaggccttgggcgatg 5763
to top
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   gagggaggccttgggcgatg 517
             ||||||||||||||||||||
Sbjct: 39948 gagggaggccttgggcgatg 39967
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    cggtaaatccagcttgtttg 205
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
to top
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209111

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    tagaaataataaaatgaaaa 28
            ||||||||||||||||||||
Sbjct: 1709 tagaaataataaaatgaaaa 1728
to top
>emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1082A3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171505

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      tagaaataataaaatgaaaa 28
              ||||||||||||||||||||
Sbjct: 153269 tagaaataataaaatgaaaa 153288
to top
>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      atgatagaaataataaaatg 24
              ||||||||||||||||||||
Sbjct: 940104 atgatagaaataataaaatg 940123
to top
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ggctagcctggcaaactcct 224
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
to top
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tcccttgaagagcacaaaca 263
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
to top
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ttgaagagcacaaacatgat 267
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
to top
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    cggtaaatccagcttgtttg 205
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225
to top
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence
          Length = 193547

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tagaaataataaaatgaaaa 28
              ||||||||||||||||||||
Sbjct: 143301 tagaaataataaaatgaaaa 143282
to top
>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete
              sequence
          Length = 171320

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      atagaaataataaaatgaaa 27
              ||||||||||||||||||||
Sbjct: 159096 atagaaataataaaatgaaa 159077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,575,948
Number of Sequences: 3902068
Number of extensions: 4575948
Number of successful extensions: 98038
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97764
Number of HSP's gapped (non-prelim): 270
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top