ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
2gb|AY109778.1| Zea mays CL3683_1 mRNA sequence 377 e-101
3ref|NM_196961.1| Oryza sativa (japonica cultivar-group) putative... 317 2e-83
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 137 5e-29
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 137 5e-29
7ref|NM_113252.2| Arabidopsis thaliana CYN (CYANASE); cyanate hyd... 84 6e-13
8gb|AY093708.1| Arabidopsis thaliana AT3g23490/MEE5_3 mRNA, compl... 84 6e-13
9gb|AF410298.1|AF410298 Arabidopsis thaliana AT3g23490/MEE5_3 mRN... 84 6e-13
10emb|BX825526.1|CNS0A6B4 Arabidopsis thaliana Full-length cDNA Co... 84 6e-13
11gb|AY086040.1| Arabidopsis thaliana clone 20782 mRNA, complete s... 84 6e-13
12dbj|AB004568.1| Arabidopsis thaliana mRNA for cyanase, complete cds 84 6e-13
13gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 72 2e-09
14dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 60 9e-06
15dbj|AB015748.1| Arabidopsis thaliana gene for cyanase, complete cds 60 9e-06
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
17dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
18ref|NM_189417.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
19gb|AC164925.3| Colobus guereza clone CH272-271L4, complete sequence 44 0.54
20emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 i... 44 0.54
21emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chro... 42 2.1
22gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Ca... 42 2.1
23gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, co... 42 2.1
24dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.1
25emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 i... 42 2.1
26gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, com... 40 8.4
27gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, comp... 40 8.4
28emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.4
29emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 8.4
30gb|AC144777.3| Mus musculus BAC clone RP23-370N15 from chromosom... 40 8.4
31emb|BX897657.8| Zebrafish DNA sequence from clone DKEYP-84C2, co... 40 8.4
32gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome... 40 8.4
33dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
34gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosyn... 40 8.4
35dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
36gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.4
37emb|AL135961.4|CNS01DVM Human chromosome 14 DNA sequence BAC R-9... 40 8.4
38emb|AL109766.5|CNS018OZ Human chromosome 14 DNA sequence BAC R-3... 40 8.4
39dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.4
40dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.4
41emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on ch... 40 8.4
42emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chro... 40 8.4 
>dbj|AK105134.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-A03, full
           insert sequence
          Length = 818

 Score =  440 bits (222), Expect = e-120
 Identities = 351/394 (89%)
 Strand = Plus / Minus

                                                                       
Query: 226 caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
           |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 628 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 569

                                                                       
Query: 286 tcggtgtaaggcagatacttcccatcaaatgtgaccaccacacgttcttttccatcagcc 345
           ||  ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 568 tcactgtaaggaagatatttcccatcaaatgtgaccaccacgcgatcttttccatcagca 509

                                                                       
Query: 346 ccttgaatcttgtcaaccgaacagtagaagtctatagccgacatgattccgtcgccaaaa 405
           ||||| | |||||||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 508 ccttgtaccttgtcaaccgaacagtagaagtctatagctgacatgattccatcaccaaac 449

                                                                       
Query: 406 tcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcattcaatctg 465
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcctcattgataatttccttgatgctctctccaaaatgcataacagcttcattcaatctg 389

                                                                       
Query: 466 tatatggcgggctcgtgcacgatgtccgggtggtaggaccggaaaggcggccgcatcatg 525
           || |||||||||||||| |||||||||||||||||||| ||||| ||||||  |||||||
Sbjct: 388 tagatggcgggctcgtggacgatgtccgggtggtaggagcggaacggcggctccatcatg 329

                                                                       
Query: 526 agctccaggagctcgtcggtgagcgccgggacggccgcccggagcttgggcgccatgtcg 585
           ||| | | ||| |||||||||||| |||| ||||||||||| |||   |||||| | || 
Sbjct: 328 agcgcgacgaggtcgtcggtgagccccggcacggccgcccgcagcgccggcgccgtctcc 269

                                             
Query: 586 ggcttaagctgcgcctggcggcgcaacagctgcg 619
           ||||| ||||||||||| || |||| ||||||||
Sbjct: 268 ggcttcagctgcgcctgccgccgcagcagctgcg 235
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>gb|AY109778.1| Zea mays CL3683_1 mRNA sequence
          Length = 600

 Score =  377 bits (190), Expect = e-101
 Identities = 316/358 (88%)
 Strand = Plus / Minus

                                                                       
Query: 262 gacatcatatgttcagatctctgctcggtgtaaggcagatacttcccatcaaatgtgacc 321
           |||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||
Sbjct: 548 gacatcatatgttcagatttctgttcagtgtaaggtagatacttcccatcaaatgtgacc 489

                                                                       
Query: 322 accacacgttcttttccatcagccccttgaatcttgtcaaccgaacagtagaagtctata 381
           |||||||| |||||||| || ||||||| || ||||||||| ||||| ||||||||||| 
Sbjct: 488 accacacgatcttttccgtcggccccttcaaccttgtcaactgaacaatagaagtctatg 429

                                                                       
Query: 382 gccgacatgattccgtcgccaaaatcctcattgatgatttccttgatgctctctccaaaa 441
           || ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctgacatgattccatcaccaaactcctcattgatgatttccttgatgctctctccaaaa 369

                                                                       
Query: 442 tgcataacagcttcattcaatctgtatatggcgggctcgtgcacgatgtccgggtggtag 501
           |||||||||||||||||||||||||| |||||||||||||| |||||||   ||||||||
Sbjct: 368 tgcataacagcttcattcaatctgtaaatggcgggctcgtggacgatgttgaggtggtag 309

                                                                       
Query: 502 gaccggaaaggcggccgcatcatgagctccaggagctcgtcggtgagcgccgggacggcc 561
           |||||||| |||||| |||||||||| || | ||| ||||| |||||||  || | ||||
Sbjct: 308 gaccggaagggcggctgcatcatgagttcgatgaggtcgtccgtgagcgtgggcagggcc 249

                                                                     
Query: 562 gcccggagcttgggcgccatgtcgggcttaagctgcgcctggcggcgcaacagctgcg 619
           ||||  |||  |||| || |||||| ||| |||||||||||||| |||| ||||||||
Sbjct: 248 gccctcagcgcgggcaccgtgtcggccttgagctgcgcctggcgccgcagcagctgcg 191
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>ref|NM_196961.1| Oryza sativa (japonica cultivar-group) putative cyanase
           (OSJNBa0079L16.19), mRNA
          Length = 1124

 Score =  317 bits (160), Expect = 2e-83
 Identities = 220/240 (91%)
 Strand = Plus / Minus

                                                                       
Query: 226 caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
           |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 992 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 933

                                                                       
Query: 286 tcggtgtaaggcagatacttcccatcaaatgtgaccaccacacgttcttttccatcagcc 345
           ||  ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 932 tcactgtaaggaagatatttcccatcaaatgtgaccaccacgcgatcttttccatcagca 873

                                                                       
Query: 346 ccttgaatcttgtcaaccgaacagtagaagtctatagccgacatgattccgtcgccaaaa 405
           ||||| | |||||||||||||||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 872 ccttgtaccttgtcaaccgaacagtagaagtctatagctgacatgattccatcaccaaac 813

                                                                       
Query: 406 tcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcattcaatctg 465
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tcctcattgataatttccttgatgctctctccaaaatgcataacagcttcattcaatctg 753



 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                       
Query: 463 ctgtatatggcgggctcgtgcacgatgtccgggtggtaggaccggaaaggcggccgcatc 522
           ||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||  ||||
Sbjct: 452 ctgtagatggcgggctcgtggacgatgtccgggtggtaggagcggaacggcggctccatc 393

                                                                       
Query: 523 atgagctccaggagctcgtcggtgagcgccgggacggccgcccggagcttgggcgccatg 582
           |||||| | | ||| |||||||||||| |||| ||||||||||| |||   |||||| | 
Sbjct: 392 atgagcgcgacgaggtcgtcggtgagccccggcacggccgcccgcagcgccggcgccgtc 333

                                                
Query: 583 tcgggcttaagctgcgcctggcggcgcaacagctgcg 619
           || ||||| ||||||||||| || |||| ||||||||
Sbjct: 332 tccggcttcagctgcgcctgccgccgcagcagctgcg 296
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  137 bits (69), Expect = 5e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                            
Query: 290      tgtaaggcagatacttcccatcaaatgtgaccaccacacgttcttttccatcagcccctt 349
                ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 16959246 tgtaaggaagatatttcccatcaaatgtgaccaccacgcgatcttttccatcagcacctt 16959187

                                                         
Query: 350      gaatcttgtcaaccgaacagtagaagtctatagccgacatg 390
                | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 16959186 gtaccttgtcaaccgaacagtagaagtctatagctgacatg 16959146



 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                            
Query: 463      ctgtatatggcgggctcgtgcacgatgtccgggtggtaggaccggaaaggcggccgcatc 522
                ||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||  ||||
Sbjct: 16957056 ctgtagatggcgggctcgtggacgatgtccgggtggtaggagcggaacggcggctccatc 16956997

                                                                            
Query: 523      atgagctccaggagctcgtcggtgagcgccgggacggccgcccggagcttgggcgccatg 582
                |||||| | | ||| |||||||||||| |||| ||||||||||| |||   |||||| | 
Sbjct: 16956996 atgagcgcgacgaggtcgtcggtgagccccggcacggccgcccgcagcgccggcgccgtc 16956937

                                                     
Query: 583      tcgggcttaagctgcgcctggcggcgcaacagctgcg 619
                || ||||| ||||||||||| || |||| ||||||||
Sbjct: 16956936 tccggcttcagctgcgcctgccgccgcagcagctgcg 16956900



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                            
Query: 391      attccgtcgccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataaca 450
                ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16958738 attccatcaccaaactcctcattgataatttccttgatgctctctccaaaatgcataaca 16958679

                               
Query: 451      gcttcattcaatctg 465
                |||||||||||||||
Sbjct: 16958678 gcttcattcaatctg 16958664



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 226      caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
                |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 16959643 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 16959584
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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
              sequence
          Length = 147452

 Score =  137 bits (69), Expect = 5e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                          
Query: 290    tgtaaggcagatacttcccatcaaatgtgaccaccacacgttcttttccatcagcccctt 349
              ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 143698 tgtaaggaagatatttcccatcaaatgtgaccaccacgcgatcttttccatcagcacctt 143639

                                                       
Query: 350    gaatcttgtcaaccgaacagtagaagtctatagccgacatg 390
              | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 143638 gtaccttgtcaaccgaacagtagaagtctatagctgacatg 143598



 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                          
Query: 463    ctgtatatggcgggctcgtgcacgatgtccgggtggtaggaccggaaaggcggccgcatc 522
              ||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||  ||||
Sbjct: 141508 ctgtagatggcgggctcgtggacgatgtccgggtggtaggagcggaacggcggctccatc 141449

                                                                          
Query: 523    atgagctccaggagctcgtcggtgagcgccgggacggccgcccggagcttgggcgccatg 582
              |||||| | | ||| |||||||||||| |||| ||||||||||| |||   |||||| | 
Sbjct: 141448 atgagcgcgacgaggtcgtcggtgagccccggcacggccgcccgcagcgccggcgccgtc 141389

                                                   
Query: 583    tcgggcttaagctgcgcctggcggcgcaacagctgcg 619
              || ||||| ||||||||||| || |||| ||||||||
Sbjct: 141388 tccggcttcagctgcgcctgccgccgcagcagctgcg 141352



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                          
Query: 391    attccgtcgccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataaca 450
              ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 143190 attccatcaccaaactcctcattgataatttccttgatgctctctccaaaatgcataaca 143131

                             
Query: 451    gcttcattcaatctg 465
              |||||||||||||||
Sbjct: 143130 gcttcattcaatctg 143116



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 226    caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
              |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 144095 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 144036
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  137 bits (69), Expect = 5e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                            
Query: 290      tgtaaggcagatacttcccatcaaatgtgaccaccacacgttcttttccatcagcccctt 349
                ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 16968286 tgtaaggaagatatttcccatcaaatgtgaccaccacgcgatcttttccatcagcacctt 16968227

                                                         
Query: 350      gaatcttgtcaaccgaacagtagaagtctatagccgacatg 390
                | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 16968226 gtaccttgtcaaccgaacagtagaagtctatagctgacatg 16968186



 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                            
Query: 463      ctgtatatggcgggctcgtgcacgatgtccgggtggtaggaccggaaaggcggccgcatc 522
                ||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||  ||||
Sbjct: 16966096 ctgtagatggcgggctcgtggacgatgtccgggtggtaggagcggaacggcggctccatc 16966037

                                                                            
Query: 523      atgagctccaggagctcgtcggtgagcgccgggacggccgcccggagcttgggcgccatg 582
                |||||| | | ||| |||||||||||| |||| ||||||||||| |||   |||||| | 
Sbjct: 16966036 atgagcgcgacgaggtcgtcggtgagccccggcacggccgcccgcagcgccggcgccgtc 16965977

                                                     
Query: 583      tcgggcttaagctgcgcctggcggcgcaacagctgcg 619
                || ||||| ||||||||||| || |||| ||||||||
Sbjct: 16965976 tccggcttcagctgcgcctgccgccgcagcagctgcg 16965940



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Minus

                                                                            
Query: 391      attccgtcgccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataaca 450
                ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16967778 attccatcaccaaactcctcattgataatttccttgatgctctctccaaaatgcataaca 16967719

                               
Query: 451      gcttcattcaatctg 465
                |||||||||||||||
Sbjct: 16967718 gcttcattcaatctg 16967704



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 226      caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
                |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 16968683 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 16968624
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>ref|NM_113252.2| Arabidopsis thaliana CYN (CYANASE); cyanate hydratase AT3G23490
           (CYN) mRNA, complete cds
          Length = 947

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 602 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 543

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 542 ctctcaccaaaatgcatcactgcttcattcaacctgta 505
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>gb|AY093708.1| Arabidopsis thaliana AT3g23490/MEE5_3 mRNA, complete cds
          Length = 507

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 365 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 306

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 305 ctctcaccaaaatgcatcactgcttcattcaacctgta 268
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>gb|AF410298.1|AF410298 Arabidopsis thaliana AT3g23490/MEE5_3 mRNA, complete cds
          Length = 670

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 380 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 321

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 320 ctctcaccaaaatgcatcactgcttcattcaacctgta 283
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>emb|BX825526.1|CNS0A6B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 656

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 359 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 300

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 299 ctctcaccaaaatgcatcactgcttcattcaacctgta 262
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>gb|AY086040.1| Arabidopsis thaliana clone 20782 mRNA, complete sequence
          Length = 662

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 398 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 339

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 338 ctctcaccaaaatgcatcactgcttcattcaacctgta 301
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>dbj|AB004568.1| Arabidopsis thaliana mRNA for cyanase, complete cds
          Length = 954

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtctatagccgacatgattccgtcgccaaaatcctcattgatgatttccttgatg 429
           ||||| ||||| ||||||||||| || || |||||||| |||||||| || ||||| || 
Sbjct: 605 tagaaatctatcgccgacatgatgccatctccaaaatcttcattgataatctcctttata 546

                                                 
Query: 430 ctctctccaaaatgcataacagcttcattcaatctgta 467
           ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 545 ctctcaccaaaatgcatcactgcttcattcaacctgta 508
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>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence,
           complete sequence
          Length = 135216

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 226 caccagccatctcaagatgcattgcgggtcaatcttgacatcatatgttcagatctctgc 285
           |||||||||||||||||||  ||||||||||  || ||||||||||| ||||||||||||
Sbjct: 135 caccagccatctcaagatgtcttgcgggtcagcctagacatcatatgatcagatctctgc 76
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>dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEE5
          Length = 20724

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 400  ccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcattc 459
            |||||||| |||||||| || ||||| || ||||| ||||||||||| || |||||||||
Sbjct: 9109 ccaaaatcttcattgataatctcctttatactctcaccaaaatgcatcactgcttcattc 9168

              
Query: 460  aa 461
            ||
Sbjct: 9169 aa 9170
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>dbj|AB015748.1| Arabidopsis thaliana gene for cyanase, complete cds
          Length = 1871

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 400 ccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcattc 459
           |||||||| |||||||| || ||||| || ||||| ||||||||||| || |||||||||
Sbjct: 892 ccaaaatcttcattgataatctcctttatactctcaccaaaatgcatcactgcttcattc 833

             
Query: 460 aa 461
           ||
Sbjct: 832 aa 831
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 357      gtcaaccgaacagtagaagtctatagccgacatg 390
                ||||||||||||||||||||| ||||| ||||||
Sbjct: 42656336 gtcaaccgaacagtagaagtcgatagctgacatg 42656369



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 42/47 (89%), Gaps = 3/47 (6%)
 Strand = Plus / Plus

                                                               
Query: 298      agatacttcccatcaaatgtgaccaccacacgttcttttccatcagc 344
                ||||| |||||||||||||||   |||||||| ||||||||||||||
Sbjct: 42656257 agatatttcccatcaaatgtg---accacacgatcttttccatcagc 42656300



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 399      gccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcatt 458
                |||||| | ||||| ||| ||||| |||||||||||  ||||||| | ||||| || |||
Sbjct: 42656735 gccaaacttctcatcgataatttctttgatgctctccacaaaatgtacaacagatttatt 42656794

                        
Query: 459      caatctgt 466
                ||| ||||
Sbjct: 42656795 caacctgt 42656802



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 199      ccacatgaacatacatcctc 218
                ||||||||||||||||||||
Sbjct: 25044581 ccacatgaacatacatcctc 25044600
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>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 357    gtcaaccgaacagtagaagtctatagccgacatg 390
              ||||||||||||||||||||| ||||| ||||||
Sbjct: 177219 gtcaaccgaacagtagaagtcgatagctgacatg 177252



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 42/47 (89%), Gaps = 3/47 (6%)
 Strand = Plus / Plus

                                                             
Query: 298    agatacttcccatcaaatgtgaccaccacacgttcttttccatcagc 344
              ||||| |||||||||||||||   |||||||| ||||||||||||||
Sbjct: 177140 agatatttcccatcaaatgtg---accacacgatcttttccatcagc 177183



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                          
Query: 399    gccaaaatcctcattgatgatttccttgatgctctctccaaaatgcataacagcttcatt 458
              |||||| | ||||| ||| ||||| |||||||||||  ||||||| | ||||| || |||
Sbjct: 177618 gccaaacttctcatcgataatttctttgatgctctccacaaaatgtacaacagatttatt 177677

                      
Query: 459    caatctgt 466
              ||| ||||
Sbjct: 177678 caacctgt 177685
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>ref|NM_189417.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 435

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 42/47 (89%), Gaps = 3/47 (6%)
 Strand = Plus / Minus

                                                          
Query: 298 agatacttcccatcaaatgtgaccaccacacgttcttttccatcagc 344
           ||||| |||||||||||||||   |||||||| ||||||||||||||
Sbjct: 307 agatatttcccatcaaatgtg---accacacgatcttttccatcagc 264
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>gb|AC164925.3| Colobus guereza clone CH272-271L4, complete sequence
          Length = 199954

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 192   tatgttaccacatgaacataca 213
             ||||||||||||||||||||||
Sbjct: 28192 tatgttaccacatgaacataca 28213
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>emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 in linkage group 19,
             complete sequence
          Length = 105707

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     caggctaaacaattcatgaaaa 27
             ||||||||||||||||||||||
Sbjct: 87517 caggctaaacaattcatgaaaa 87538
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>emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chromosome 14, complete
            sequence
          Length = 227368

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 329  gttcttttccatcagcccctt 349
            |||||||||||||||||||||
Sbjct: 7244 gttcttttccatcagcccctt 7224
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>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166083

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     gctaaacaattcatgaaaaat 29
             |||||||||||||||||||||
Sbjct: 84448 gctaaacaattcatgaaaaat 84428
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>gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, complete sequence
          Length = 167878

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      gctaaacaattcatgaaaaat 29
              |||||||||||||||||||||
Sbjct: 126625 gctaaacaattcatgaaaaat 126645
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 529     tccaggagctcgtcggtgagcgccg 553
               |||||| ||||||||||||||||||
Sbjct: 3299261 tccaggtgctcgtcggtgagcgccg 3299285
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>emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 in linkage group 9,
              complete sequence
          Length = 177986

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tcatgccagaaaagccattat 147
              |||||||||||||||||||||
Sbjct: 128579 tcatgccagaaaagccattat 128599



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tcatgccagaaaagccattat 147
              |||||||||||||||||||||
Sbjct: 128232 tcatgccagaaaagccattat 128252



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tcatgccagaaaagccattat 147
              |||||||||||||||||||||
Sbjct: 127538 tcatgccagaaaagccattat 127558
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>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence
          Length = 196427

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    atatgttaccacatgaacatacat 214
              ||||||||||||||| ||||||||
Sbjct: 130812 atatgttaccacatgtacatacat 130835
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>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence
          Length = 200074

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 121    ggtcattcatgccagaaaagccat 144
              |||||||||||||||| |||||||
Sbjct: 123666 ggtcattcatgccagagaagccat 123643
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 593    gctgcgcctggcggcgcaac 612
              ||||||||||||||||||||
Sbjct: 260241 gctgcgcctggcggcgcaac 260260
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 593    gctgcgcctggcggcgcaac 612
              ||||||||||||||||||||
Sbjct: 179248 gctgcgcctggcggcgcaac 179267
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>gb|AC144777.3| Mus musculus BAC clone RP23-370N15 from chromosome unknown, complete
              sequence
          Length = 201349

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     taacaaatttattctgcata 95
              ||||||||||||||||||||
Sbjct: 168561 taacaaatttattctgcata 168542
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>emb|BX897657.8| Zebrafish DNA sequence from clone DKEYP-84C2, complete sequence
          Length = 194258

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    taggtgttttgtttatctgt 119
              ||||||||||||||||||||
Sbjct: 181584 taggtgttttgtttatctgt 181603
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>gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome 7, complete sequence
          Length = 154177

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 191    atatgttaccacatgaacatacat 214
              ||||||||||||||| ||||||||
Sbjct: 115657 atatgttaccacatgtacatacat 115634
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>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0006C01
          Length = 153865

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    ccacatgaacatacatcctc 218
              ||||||||||||||||||||
Sbjct: 117104 ccacatgaacatacatcctc 117123
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>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete
             cds
          Length = 77457

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   aggagctcgtcggtgagcgc 551
             ||||||||||||||||||||
Sbjct: 39731 aggagctcgtcggtgagcgc 39712
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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0688A04
          Length = 143969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   ccacatgaacatacatcctc 218
             ||||||||||||||||||||
Sbjct: 44189 ccacatgaacatacatcctc 44208
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 537     ctcgtcggtgagcgccggga 556
               ||||||||||||||||||||
Sbjct: 1718680 ctcgtcggtgagcgccggga 1718699
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>emb|AL135961.4|CNS01DVM Human chromosome 14 DNA sequence BAC R-910K8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202843

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    taaacaattcatgaaaaata 30
             ||||||||||||||||||||
Sbjct: 12594 taaacaattcatgaaaaata 12613
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>emb|AL109766.5|CNS018OZ Human chromosome 14 DNA sequence BAC R-305B6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184448

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     taaacaattcatgaaaaata 30
              ||||||||||||||||||||
Sbjct: 156551 taaacaattcatgaaaaata 156570
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>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
              sequence
          Length = 118828

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 419    tttccttgatgctctctccaaaatgcat 446
              ||||||| |||||| |||||||||||||
Sbjct: 104157 tttccttcatgctccctccaaaatgcat 104184
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>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
              sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 419    tttccttgatgctctctccaaaatgcat 446
              ||||||| |||||| |||||||||||||
Sbjct: 104157 tttccttcatgctccctccaaaatgcat 104184
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>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete
             sequence
          Length = 189118

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    taacaaatttattctgcata 95
             ||||||||||||||||||||
Sbjct: 52938 taacaaatttattctgcata 52919
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>emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chromosome X, complete
             sequence
          Length = 227581

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   ccatcaaatgtgaccaccac 326
             ||||||||||||||||||||
Sbjct: 45125 ccatcaaatgtgaccaccac 45106


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,055,627
Number of Sequences: 3902068
Number of extensions: 5055627
Number of successful extensions: 94981
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94676
Number of HSP's gapped (non-prelim): 302
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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