Clone Information

BLAST Search Result

Clone Name	rbags10m01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL9_ORYSA (P49210) 60S ribosomal protein L9	214	1e-59
2	RL9_PEA (P30707) 60S ribosomal protein L9 (Gibberellin-regulated...	202	5e-55
3	RL9_ARATH (P49209) 60S ribosomal protein L9	198	2e-53
4	RL9_SPOFR (Q963B7) 60S ribosomal protein L9	149	2e-37
5	RL9_ICTPU (Q90YW0) 60S ribosomal protein L9	150	8e-37
6	RL9_MACFA (Q5IFJ7) 60S ribosomal protein L9	149	1e-36
7	RL9_RAT (P17077) 60S ribosomal protein L9	149	1e-36
8	RL9_MOUSE (P51410) 60S ribosomal protein L9	149	1e-36
9	RL9_HUMAN (P32969) 60S ribosomal protein L9	149	1e-36
10	RL9_BOVIN (Q3SYR7) 60S ribosomal protein L9	149	1e-36
11	RL9_DROME (P50882) 60S ribosomal protein L9	145	1e-36
12	RL9A_YEAST (P05738) 60S ribosomal protein L9-A (L8) (YL11) (RP25)	146	4e-35
13	RL9B_YEAST (P51401) 60S ribosomal protein L9-B (L8) (YL11) (RP25)	145	5e-35
14	RL9A_SCHPO (Q10232) 60S ribosomal protein L9-A	143	2e-34
15	RL9_CAEEL (Q95Y90) 60S ribosomal protein L9	140	3e-34
16	RL9B_SCHPO (O74905) 60S ribosomal protein L9-B	142	4e-34
17	RL6_AERPE (Q9YF91) 50S ribosomal protein L6P	90	4e-18
18	RL6_PYRAB (Q9V1V1) 50S ribosomal protein L6P	89	6e-18
19	RL6_METJA (P54042) 50S ribosomal protein L6P	89	7e-18
20	RL6_METVA (P14030) 50S ribosomal protein L6P	88	1e-17
21	RL6_PYRHO (O59433) 50S ribosomal protein L6P	88	2e-17
22	RL6_SULSO (Q9UX91) 50S ribosomal protein L6P	87	2e-17
23	RL9_HAECO (O02376) 60S ribosomal protein L9 (Fragment)	80	4e-16
24	RL6_METTH (O26127) 50S ribosomal protein L6P	82	1e-15
25	RL6_SULAC (O05637) 50S ribosomal protein L6P	79	8e-15
26	RL6_HALMA (P14135) 50S ribosomal protein L6P (Hmal6) (Hl10)	78	1e-14
27	RL6_ARCFU (O28370) 50S ribosomal protein L6P	78	1e-14
28	RL6_HALSA (Q9HPB8) 50S ribosomal protein L6P (HL10)	77	2e-14
29	LOLC_BUCAP (Q8K9N8) Lipoprotein-releasing system transmembrane p...	32	0.81
30	CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ...	32	0.81
31	YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'regio...	31	1.8
32	RL6_RHOPA (Q6N4U8) 50S ribosomal protein L6 (RRP-L6)	31	1.8
33	RL6_MYCCT (P04448) 50S ribosomal protein L6	31	1.8
34	CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precur...	30	3.1
35	VE1_HPV58 (P26543) Replication protein E1 (EC 3.6.1.-) (ATP-depe...	30	4.0
36	MTERF_HUMAN (Q99551) Transcription termination factor, mitochond...	30	5.3
37	MTERF_PONPY (Q5R9U8) Transcription termination factor, mitochond...	30	5.3
38	R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [...	29	6.9
39	IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 ...	29	6.9
40	CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precur...	29	6.9
41	VE1_HPV52 (P36730) Replication protein E1 (EC 3.6.1.-) (ATP-depe...	29	9.0
42	PDR10_YEAST (P51533) ATP-dependent permease PDR10	29	9.0
43	RL6_MYCPN (Q50303) 50S ribosomal protein L6	29	9.0

>RL9_ORYSA (P49210) 60S ribosomal protein L9|
          Length = 190

 Score =  214 bits (546), Expect(2) = 1e-59
 Identities = 107/117 (91%), Positives = 112/117 (95%)
 Frame = -1

Query: 465 ISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVT 286
           ISHVQNLITGVTKG+RYKMRFVYAHFPINASIT +N  IEIRNFLGEKKVRKVDML+GVT
Sbjct: 73  ISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVT 132

Query: 285 ILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKEE 115
           ILRSEKVKDE+VLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKG I E+
Sbjct: 133 ILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189



 Score = 35.0 bits (79), Expect(2) = 1e-59
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VDAWFGTRRTMAAI
Sbjct: 54  LQVDAWFGTRRTMAAI 69

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>RL9_PEA (P30707) 60S ribosomal protein L9 (Gibberellin-regulated protein|
           GA)
          Length = 193

 Score =  202 bits (515), Expect(2) = 5e-55
 Identities = 100/117 (85%), Positives = 109/117 (93%)
 Frame = -1

Query: 465 ISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVT 286
           +SHV+NLITGVTKGFRYKMRFVYA FPINASIT  N+ IEIRNFLGEKKVRKVD+LDGV+
Sbjct: 76  LSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVS 135

Query: 285 ILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKEE 115
           I+RSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVS+KGA+  E
Sbjct: 136 IIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVE 192



 Score = 31.2 bits (69), Expect(2) = 5e-55
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           LK+DAWFG+R+T AAI
Sbjct: 57  LKIDAWFGSRKTSAAI 72

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>RL9_ARATH (P49209) 60S ribosomal protein L9|
          Length = 194

 Score =  198 bits (504), Expect(2) = 2e-53
 Identities = 99/117 (84%), Positives = 106/117 (90%)
 Frame = -1

Query: 465 ISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVT 286
           +SHV NLI+GVT+GFRYKMRFVYAHFPINASI    + IEIRNFLGEKKVRKV+MLDGVT
Sbjct: 77  LSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVT 136

Query: 285 ILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKEE 115
           I+RSEKVKDEIVLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVS+K  I EE
Sbjct: 137 IVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEE 193



 Score = 30.4 bits (67), Expect(2) = 2e-53
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           LK+D+WFGTR+T A+I
Sbjct: 58  LKIDSWFGTRKTSASI 73

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>RL9_SPOFR (Q963B7) 60S ribosomal protein L9|
          Length = 190

 Score =  149 bits (377), Expect(2) = 2e-37
 Identities = 73/114 (64%), Positives = 89/114 (78%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHV+N+I GVTKGF+YKMR VYAHFPIN   T  N  IEIRNFLGEK +R+V M  GVT+
Sbjct: 73  SHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTV 132

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIK 121
           + S K KDE++++GN +E VS SAALI Q   VKNKDIRKFLDG+YVS+K  ++
Sbjct: 133 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVE 186



 Score = 25.4 bits (54), Expect(2) = 2e-37
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           LKV+ WFG+++ +AA+
Sbjct: 53  LKVEKWFGSKKELAAV 68

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>RL9_ICTPU (Q90YW0) 60S ribosomal protein L9|
          Length = 192

 Score =  150 bits (378), Expect(2) = 8e-37
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S   KDE+VL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG + E
Sbjct: 135 ALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVE 189



 Score = 23.1 bits (48), Expect(2) = 8e-37
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A +
Sbjct: 55  LRVDKWWGNRKELATV 70

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>RL9_MACFA (Q5IFJ7) 60S ribosomal protein L9|
          Length = 192

 Score =  149 bits (376), Expect(2) = 1e-36
 Identities = 76/115 (66%), Positives = 88/115 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVAC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S+  KDE++L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG +++
Sbjct: 135 SVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQ 189



 Score = 23.5 bits (49), Expect(2) = 1e-36
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A I
Sbjct: 55  LRVDKWWGNRKELATI 70

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>RL9_RAT (P17077) 60S ribosomal protein L9|
          Length = 192

 Score =  149 bits (376), Expect(2) = 1e-36
 Identities = 76/115 (66%), Positives = 88/115 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVAC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S+  KDE++L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG +++
Sbjct: 135 SVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQ 189



 Score = 23.1 bits (48), Expect(2) = 1e-36
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A +
Sbjct: 55  LRVDKWWGNRKELATV 70

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>RL9_MOUSE (P51410) 60S ribosomal protein L9|
          Length = 192

 Score =  149 bits (376), Expect(2) = 1e-36
 Identities = 76/115 (66%), Positives = 88/115 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVAC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S+  KDE++L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG +++
Sbjct: 135 SVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQ 189



 Score = 23.1 bits (48), Expect(2) = 1e-36
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A +
Sbjct: 55  LRVDKWWGNRKELATV 70

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>RL9_HUMAN (P32969) 60S ribosomal protein L9|
          Length = 192

 Score =  149 bits (376), Expect(2) = 1e-36
 Identities = 76/115 (66%), Positives = 88/115 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVAC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S+  KDE++L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG +++
Sbjct: 135 SVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQ 189



 Score = 23.1 bits (48), Expect(2) = 1e-36
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A +
Sbjct: 55  LRVDKWWGNRKELATV 70

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>RL9_BOVIN (Q3SYR7) 60S ribosomal protein L9|
          Length = 192

 Score =  149 bits (376), Expect(2) = 1e-36
 Identities = 76/115 (66%), Positives = 88/115 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHVQN+I GVT GFRYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV  
Sbjct: 75  SHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVAC 134

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S+  KDE++L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVS+KG +++
Sbjct: 135 SVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQ 189



 Score = 23.1 bits (48), Expect(2) = 1e-36
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+VD W+G R+ +A +
Sbjct: 55  LRVDKWWGNRKELATV 70

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>RL9_DROME (P50882) 60S ribosomal protein L9|
          Length = 190

 Score =  145 bits (366), Expect(2) = 1e-36
 Identities = 71/113 (62%), Positives = 88/113 (77%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SH++N+I GVT GF+YKMR VYAHFPIN   +  N  IEIRNFLGEK +R+V+M  GVT+
Sbjct: 73  SHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTV 132

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAI 124
           + S   KDE++++GNDIE VS SAALI Q   VKNKDIRKFLDG+YVS+K  +
Sbjct: 133 VNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 185



 Score = 26.9 bits (58), Expect(2) = 1e-36
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           LKV+ WFGT++ +AA+
Sbjct: 53  LKVEKWFGTKKELAAV 68

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>RL9A_YEAST (P05738) 60S ribosomal protein L9-A (L8) (YL11) (RP25)|
          Length = 191

 Score =  146 bits (368), Expect = 4e-35
 Identities = 75/118 (63%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAAN--RGIEIRNFLGEKKVRKVDMLDGV 289
           S V N+ITGVTKG++YKMR+VYAHFPIN +I   +  + IE+RNFLG+KK+R V + DGV
Sbjct: 73  SLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGV 132

Query: 288 TILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKEE 115
           TI  S  VKDEIVL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS KG I E+
Sbjct: 133 TIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190

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>RL9B_YEAST (P51401) 60S ribosomal protein L9-B (L8) (YL11) (RP25)|
          Length = 191

 Score =  145 bits (367), Expect = 5e-35
 Identities = 75/118 (63%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAAN--RGIEIRNFLGEKKVRKVDMLDGV 289
           S V N+ITGVTKG++YKMR+VYAHFPIN +I   +  + IE+RNFLG+KK+R V + DGV
Sbjct: 73  SLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGV 132

Query: 288 TILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKEE 115
           TI  S  VKDEIVL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS KG I E+
Sbjct: 133 TIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIVED 190

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>RL9A_SCHPO (Q10232) 60S ribosomal protein L9-A|
          Length = 190

 Score =  143 bits (361), Expect = 2e-34
 Identities = 71/115 (61%), Positives = 89/115 (77%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           S + N+I GVT+GFRYKMR VYAHFPIN ++T     +EIRNFLGE+  R +  L GVT+
Sbjct: 73  SIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTV 132

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S  VKDEI+L+GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVS++G I+E
Sbjct: 133 SISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEE 187

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>RL9_CAEEL (Q95Y90) 60S ribosomal protein L9|
          Length = 189

 Score =  140 bits (353), Expect(2) = 3e-34
 Identities = 70/113 (61%), Positives = 86/113 (76%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SH++N+I GVT GFRYKMR VYAHFPIN ++   NR +EIRNFLGEK VR+V + +GV  
Sbjct: 73  SHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIA 132

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAI 124
             S   KDEIV++GND++ VS++AA I Q   VK KDIRKFLDGIYVS+K  I
Sbjct: 133 TISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTI 185



 Score = 23.9 bits (50), Expect(2) = 3e-34
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+V  WFG R+ +AAI
Sbjct: 53  LRVRKWFGVRKELAAI 68

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>RL9B_SCHPO (O74905) 60S ribosomal protein L9-B|
          Length = 189

 Score =  142 bits (359), Expect = 4e-34
 Identities = 70/115 (60%), Positives = 89/115 (77%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           S + N+I GVT+GFRYKMR VYAHFPIN ++T     +EIRNFLGE+  R +  L GVT+
Sbjct: 73  SIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTV 132

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIKE 118
             S  VKDEI+++GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVS++G I+E
Sbjct: 133 SISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEE 187

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>RL6_AERPE (Q9YF91) 50S ribosomal protein L6P|
          Length = 182

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 47/113 (41%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
 Frame = -1

Query: 459 HVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTIL 280
           H++N+I GV  GFRYK++ +Y+HFPIN  +        I NFLGEK +R   ++ GV + 
Sbjct: 75  HIRNMIKGVQGGFRYKLKIMYSHFPINVKVEGDK--FIISNFLGEKGLRIARIMPGVKV- 131

Query: 279 RSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAI 124
              +VK  +++++G D+E V+++AA I     VK+KD RKF+DGIY+ ++  I
Sbjct: 132 ---QVKGSDVIVEGIDVEKVAQTAANIELATKVKDKDRRKFMDGIYIYEREVI 181

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>RL6_PYRAB (Q9V1V1) 50S ribosomal protein L6P|
          Length = 184

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           +H+ N+I GVT+GF YK++ VY+HFPI   +      + I NFLGEK  R+  +L GVT+
Sbjct: 73  AHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDE--VIIENFLGEKAPRRAKILPGVTV 130

Query: 282 LRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
               KVK  EI+++G D E V ++AA I Q   +   D R F DGIY+ +K
Sbjct: 131 ----KVKGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177

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>RL6_METJA (P54042) 50S ribosomal protein L6P|
          Length = 182

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 45/110 (40%), Positives = 70/110 (63%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           +H+ N+I GVT+GF YK++  YAHFP+  S+      + I NFLGEK  R+  +++GVT+
Sbjct: 73  AHINNMIKGVTEGFTYKLKIRYAHFPMKVSV--KGNEVIIENFLGEKHPRRARIMEGVTV 130

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
             S    +++++ G D E V ++AA I Q   +K +D R F DGIY+ +K
Sbjct: 131 KIS---GEDVIVTGIDKEKVGQTAANIEQATRIKGRDPRVFQDGIYIVEK 177

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>RL6_METVA (P14030) 50S ribosomal protein L6P|
          Length = 182

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SH+QN+I GV++GF YK+   YAHFP+   +T     + I NFLGEK  R   +++GVT+
Sbjct: 73  SHIQNMIKGVSEGFEYKLVIRYAHFPM--KVTFKGNTVIIDNFLGEKYPRTAKVMEGVTV 130

Query: 282 LRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
               KV  +E+++ G + E V ++AA I Q   VK +D R F DGIY+ +K
Sbjct: 131 ----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177

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>RL6_PYRHO (O59433) 50S ribosomal protein L6P|
          Length = 184

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           +H+ N+I GVT+GF YK++ VY+HFPI   +      + I NFLGEK  R+  +L GVT+
Sbjct: 73  AHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDE--VIIENFLGEKAPRRAKILPGVTV 130

Query: 282 LRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
               KVK  EI+++G D E   ++AA I Q   +   D R F DGIY+ +K
Sbjct: 131 ----KVKGQEIIVEGIDKEATGQTAANIEQATRITKWDRRVFQDGIYIVEK 177

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>RL6_SULSO (Q9UX91) 50S ribosomal protein L6P|
          Length = 181

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
 Frame = -1

Query: 465 ISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVT 286
           +SH++N+ITGVTKG+RY ++ +Y HFP   S+      ++I N +GEK  R+  +L+GV 
Sbjct: 72  VSHIKNMITGVTKGYRYYLKIIYTHFP--TSVKVVGNEVQITNLIGEKNTRRAQILEGVK 129

Query: 285 ILRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAIK 121
           +     VK ++IV++G ++E V+++AA I     +   D R F DGI++  K  I+
Sbjct: 130 V----TVKGEDIVVEGPNLEAVAQTAANIESASKISGFDRRIFSDGIFIYKKEVIE 181

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>RL9_HAECO (O02376) 60S ribosomal protein L9 (Fragment)|
          Length = 141

 Score = 80.1 bits (196), Expect(2) = 4e-16
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDM 301
           SH+QN+I GVTKGFRYKMR VYAHFPIN ++    R +EIRNFLGEK VR V +
Sbjct: 73  SHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126



 Score = 23.5 bits (49), Expect(2) = 4e-16
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 523 LKVDAWFGTRRTMAAI 476
           L+V  WFG R+ +AAI
Sbjct: 53  LRVRKWFGVRKEIAAI 68

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>RL6_METTH (O26127) 50S ribosomal protein L6P|
          Length = 177

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           +H+ N+ITGVT+GFRY+M+ VYAHFP+  S+  A   + I NFLGE+  R    +    +
Sbjct: 72  AHISNMITGVTEGFRYRMKIVYAHFPM--SVKVAGDKVVIENFLGERHPRTARFVGDTKV 129

Query: 282 LRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
               +VK DE+ + G + E V ++ A I Q   +K +D R F DGIY+  K
Sbjct: 130 ----QVKGDEVEITGINKEHVGQTMANIEQATKIKGRDPRVFQDGIYLVSK 176

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>RL6_SULAC (O05637) 50S ribosomal protein L6P|
          Length = 189

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
 Frame = -1

Query: 465 ISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVT 286
           I+H++N+ITG   G+RY ++ +  HFPI  S+  +   +++ N +GEK +R+  +L GV 
Sbjct: 75  IAHIKNMITGTINGYRYYLKVISTHFPI--SVKVSGDEVQVSNLIGEKNIRRAKILPGVK 132

Query: 285 ILRSEKVK-DEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAI 124
           +     VK ++IV++G+DI  V+++AA I     +   D R F DGIY+  K  I
Sbjct: 133 V----TVKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVI 183

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>RL6_HALMA (P14135) 50S ribosomal protein L6P (Hmal6) (Hl10)|
          Length = 177

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 40/110 (36%), Positives = 64/110 (58%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SH++N+  GVT+G+ Y M   Y+HFP+  ++      + I NFLGEK  R+  +     +
Sbjct: 67  SHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDE--VVIENFLGEKAPRRTTIHGDTDV 124

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
              E   +E+ + G DIE V ++AA I Q   + +KD+R F DG+Y++ K
Sbjct: 125 ---EIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 171

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>RL6_ARCFU (O28370) 50S ribosomal protein L6P|
          Length = 196

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 43/109 (39%), Positives = 62/109 (56%)
 Frame = -1

Query: 459 HVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTIL 280
           H++NLITGV +GF Y ++ VYAHFPI   +      + I NF+GEK  R+  ++    + 
Sbjct: 92  HIENLITGVKEGFEYHLKVVYAHFPI--KVRVEGNEVIIENFIGEKHPRRAKIVGRAQV- 148

Query: 279 RSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDK 133
             E    +I + G DIE   ++AA + Q   +K KD R F DGIY+  K
Sbjct: 149 --EISGQDIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195

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>RL6_HALSA (Q9HPB8) 50S ribosomal protein L6P (HL10)|
          Length = 177

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 41/112 (36%), Positives = 64/112 (57%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           SHV N+  GV++G+ YK+   Y+HFP+   +      + I+NFLGEK  R+  +     +
Sbjct: 67  SHVANMFHGVSEGWEYKLEVHYSHFPMQVDVEGEE--VVIQNFLGEKAARRTQIRGDTDV 124

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGA 127
           +  +   +E+ L G  IE V ++AA I Q   V +KD R F DG+Y+ +K A
Sbjct: 125 VVDD---EEVTLSGPSIEDVGQTAADIEQLTRVTDKDTRVFQDGVYIVEKPA 173

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>LOLC_BUCAP (Q8K9N8) Lipoprotein-releasing system transmembrane protein lolC|
          Length = 399

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 28/104 (26%), Positives = 50/104 (48%)
 Frame = -1

Query: 435 VTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTILRSEKVKDE 256
           +  GF+ K +     F  +  IT  NR I   NF   K+  K+  ++ +T   S+KV   
Sbjct: 47  IMNGFQNKFKNDILSFIPHIIITNKNRNINKLNF--PKETLKLKNVEEITDFISKKV--- 101

Query: 255 IVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGAI 124
           I+ + N+I +       I  + +++N +I+KFL  ++     AI
Sbjct: 102 IIENKNEINIGEIIGINIKNEKNLENYNIKKFLHTLHSRKYNAI 145

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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
 Frame = -3

Query: 397  RPLPHQRIHHRSQPRHRDQELPRRKKGKES*HA*RCDNPAVREGQGRDRPGWQ*H*ACLP 218
            R LP  R+    +PR R +  PRR++G       R   P  RE   +D PG         
Sbjct: 2272 RLLPELRLRRARRPRPRQRRRPRRRRGGGGRALRRAPGP--REPLAQDSPGRGPSVCLAR 2329

Query: 217  LCCPDQPE--MPREEQGHQEVPGRHLCQRQGRHQGR----VVLSPPILP 89
               P  P+  +P    G  + P   L Q+  R   R    +VLSPP  P
Sbjct: 2330 AARPAGPQRLLPGPRTG--QAPRARLPQKPARSVQRERRGLVLSPPPPP 2376

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>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
 Frame = -3

Query: 403 RLRPLPHQRIHHRSQPRHRDQELPRRKKGKES*HA*RCDNPAVR---EGQGRDRPGWQ*H 233
           RLR  P     H  +PR R      R +G    H  +   PAVR   E Q R+  G +  
Sbjct: 158 RLREQPR----HAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRGPDEDQAREFRGPRHR 213

Query: 232 *ACLPLCCPDQPEMPREEQGHQEVPGRHLCQRQG--RHQGR 116
               P   P   ++ R E GH +  G HL  R+G  R QGR
Sbjct: 214 RERHP---PTARDVLRGEPGHGD--GHHLEGRRGRPRPQGR 249

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>RL6_RHOPA (Q6N4U8) 50S ribosomal protein L6 (RRP-L6)|
          Length = 176

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 25/87 (28%), Positives = 41/87 (47%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           + + NL+ GVTKGF  K+              AA +G +++  LG       D+ +G+TI
Sbjct: 69  AQIANLVEGVTKGFEKKLEIT------GVGYRAAMQGKKLQLALGYSHDVLYDIPEGITI 122

Query: 282 LRSEKVKDEIVLDGNDIELVSRSAALI 202
              +  +  +V  G D + V + AA I
Sbjct: 123 TVPKPTEINVV--GIDPQKVGQVAAEI 147

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>RL6_MYCCT (P04448) 50S ribosomal protein L6|
          Length = 180

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -1

Query: 462 SHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTI 283
           S +Q ++TGV++GF+ +++             AA  G ++   LG     + ++ DGV I
Sbjct: 71  SLLQGMLTGVSEGFKKELQIT------GVGYKAAVNGSKLNLSLGYSHPVEFEIPDGVVI 124

Query: 282 LRSEKVK-DEIVLDGNDIELVSRSAALI 202
              + VK  E+ + G D +LV + AA I
Sbjct: 125 ---QAVKPTELAITGIDKQLVGQVAANI 149

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>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
           (Fragment)
          Length = 1028

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 25/96 (26%), Positives = 33/96 (34%), Gaps = 15/96 (15%)
 Frame = -3

Query: 292 CDNPAVREGQGRDRPGWQ*H*ACLPLCCPD----QPEMPREEQGHQEVPGRHL------- 146
           C NP +R GQ            C P C  D    +PE+      H   PG          
Sbjct: 639 CGNPTIRSGQ------------CCPSCTDDFVVQKPELSTPSICH--APGGEYFVEGETW 684

Query: 145 ----CQRQGRHQGRVVLSPPILPQLLCSR*QKLSES 50
               C +   H GRV+    + P LLC    +  +S
Sbjct: 685 NIDSCTQCTCHSGRVLCETEVCPPLLCQNPSRTQDS 720

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>VE1_HPV58 (P26543) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 644

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 312 KVDMLDGVTILRSEKVKDEI--VLDGNDIELVSRSAALINQKC 190
           K+ M+D VT +    + D +   LDGNDI +  +  AL+  KC
Sbjct: 510 KLGMIDDVTAISWTYIDDYMRNALDGNDISIDVKHRALVQLKC 552

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>MTERF_HUMAN (Q99551) Transcription termination factor, mitochondrial precursor|
           (mTERF) (Mitochondrial transcription termination factor
           1)
          Length = 399

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 336 FLGEKKVR-KVDMLDGVTILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDI 169
           FL EKK   K+D L    I  S+ +++  VLD +   L SR   L+N  C++   +I
Sbjct: 322 FLAEKKFNDKIDCLMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNI 378

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>MTERF_PONPY (Q5R9U8) Transcription termination factor, mitochondrial precursor|
           (mTERF) (Mitochondrial transcription termination factor
           1)
          Length = 398

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 336 FLGEKKVR-KVDMLDGVTILRSEKVKDEIVLDGNDIELVSRSAALINQKCHVKNKDI 169
           FL EKK   K+D L    I  S+ +++  VLD +   L SR   L+N  C++   +I
Sbjct: 321 FLAEKKFNDKIDCLMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNI 377

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>R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7071

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 175  LVLHVAFLVDQGSRAGDKLNVIAIQDDLVLDLLGPQDCHTVKHVNFPYLF 324
            +V+ V  L   G    + +   AIQD +  D++   DC   KH  F   F
Sbjct: 2764 IVMPVHILSVHGGYTNEIIGYKAIQDGVTRDIVSTDDCFANKHAGFDSWF 2813

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>IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 subunit)|
           (Importin 95)
          Length = 863

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -3

Query: 187 REEQGHQEVPGRHLCQRQGRHQGRVVLSPPILPQLLCSR*QKLSESSWSLSKQRSETVFL 8
           +E Q   EVP R   Q  G  +       P+L +LLC++ +   E  W++S   +  + L
Sbjct: 298 QEAQDLNEVPAR---QNHGFARAAAADILPVLLKLLCNQDEDADEDDWNISMAAATCLQL 354

Query: 7   F 5
           F
Sbjct: 355 F 355

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>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
          Length = 1027

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 23/86 (26%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
 Frame = -3

Query: 292 CDNPAVREGQGRDRPGWQ*H*ACLPLCCPDQPEMPREEQGHQEV---PGRHL-------- 146
           CDNP +R G             C P C P++    + E     V   PG           
Sbjct: 643 CDNPTIRPGH------------CCPTC-PEESSSHKPELSEASVCLAPGGEYFVEGETWN 689

Query: 145 ---CQRQGRHQGRVVLSPPILPQLLC 77
              C +   H GRV+    + P LLC
Sbjct: 690 IDSCTQCTCHSGRVLCETEVCPPLLC 715

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>VE1_HPV52 (P36730) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 647

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 312 KVDMLDGVTILRSEKVKDEI--VLDGNDIELVSRSAALINQKC 190
           KV M+D VT +    + D +   LDGNDI +  +  AL+  KC
Sbjct: 513 KVGMIDDVTPICWTYIDDYMRNALDGNDISVDVKHRALVQIKC 555

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>PDR10_YEAST (P51533) ATP-dependent permease PDR10|
          Length = 1564

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 215 ERETSSMSLPSRTISSLTFSDRRIVTPSSMSTFLTFFSPRKFLISMPR 358
           + +T S+  PS    + TFSD     P+ ++T +TF  P  FLI++ R
Sbjct: 607 KHKTYSLYRPSADAFASTFSD----VPTKLATAVTFNIPYYFLINLKR 650

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>RL6_MYCPN (Q50303) 50S ribosomal protein L6|
          Length = 184

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 26/87 (29%), Positives = 39/87 (44%)
 Frame = -1

Query: 456 VQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLGEKKVRKVDMLDGVTILR 277
           + N I GVT+GF  K+R V   +  N        G  +   LG     K  +  G+T+ +
Sbjct: 75  ITNAIIGVTQGFEKKLRLVGVGYRANV------EGETLNLQLGYSHPIKEKIPKGLTV-K 127

Query: 276 SEKVKDEIVLDGNDIELVSRSAALINQ 196
            EK   EI + G   ELV + A  + +
Sbjct: 128 VEK-NTEITISGISKELVGQFATEVRK 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,222,727
Number of Sequences: 219361
Number of extensions: 1260679
Number of successful extensions: 4608
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4587
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result