ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
2dbj|AK062000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 3e-92
3ref|NM_187508.1| Oryza sativa (japonica cultivar-group), predic... 276 8e-71
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 268 2e-68
5gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
7gb|BT024136.1| Zea mays clone EL01N0445G05 mRNA sequence 188 1e-44
8gb|AY111022.1| Zea mays CL10149_2 mRNA sequence 155 2e-34
9gb|AY112579.1| Zea mays CL10149_-1 mRNA sequence 149 1e-32
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
12emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial se... 121 3e-24
13gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome... 107 4e-20
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
15dbj|AK070010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 107 4e-20
17emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 107 4e-20
18emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in l... 58 4e-05
19gb|AC084024.17| Homo sapiens chromosome 8, clone RP11-90P5, comp... 46 0.14
20emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 ... 46 0.14
21emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-8... 44 0.53
22ref|NM_116977.2| Arabidopsis thaliana unknown protein AT4G09080 ... 42 2.1
23gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, compl... 42 2.1
24emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on ch... 42 2.1
25emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chr... 42 2.1
26gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, comp... 42 2.1
27gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, com... 42 2.1
28gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome... 42 2.1
29emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, ... 42 2.1
30gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, co... 42 2.1
31gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosom... 42 2.1
32gb|AC091525.17| Homo sapiens 12 BAC RP11-490N22 (Roswell Park Ca... 42 2.1
33gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosom... 42 2.1
34gb|AY585655.1| Arabidopsis thaliana chloroplast outer membrane p... 42 2.1
35emb|BX827624.1|CNS0A4MU Arabidopsis thaliana Full-length cDNA Co... 42 2.1
36gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Canc... 42 2.1
37gb|AC025157.18| Homo sapiens 12 BAC RP11-401I10 (Roswell Park Ca... 42 2.1
38emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-5... 42 2.1
39emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-4... 42 2.1
40gb|AC005359.1|AC005359 REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ CHE... 42 2.1
41gb|AF072897.1|AF072897 Arabidopsis thaliana BAC T8A17 chromosome... 42 2.1
42gb|AC134843.4| Mus musculus BAC clone RP24-388C21 from 3, comple... 42 2.1
43gb|AC152109.1| Pichia stipitis clone JGIAHYZ-13H12, complete seq... 40 8.3
44ref|XM_528159.1| PREDICTED: Pan troglodytes similar to mKIAA1077... 40 8.3
45ref|XM_477671.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
46ref|XM_363152.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.3
47emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 40 8.3
48gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome ... 40 8.3
49gb|AC006026.2| Homo sapiens BAC clone GS1-96J14 from 7, complete... 40 8.3
50emb|AL450426.7| Human DNA sequence from clone RP11-317C20 on chr... 40 8.3
51gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.3
52emb|AL136086.8| Human DNA sequence from clone GS1-56G5 on chromo... 40 8.3
53gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cance... 40 8.3
54emb|AL096819.17|HSDJ53A19 Human DNA sequence from clone RP1-53A1... 40 8.3
55gb|AF545571.1| Homo sapiens sulfatase SULF1 precursor, mRNA, com... 40 8.3
56gb|BC068565.1| Homo sapiens sulfatase 1, mRNA (cDNA clone MGC:87... 40 8.3
57emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 40 8.3
58emb|BX927069.11| Zebrafish DNA sequence from clone DKEY-24C22 in... 40 8.3
59emb|BX571746.1|HSM806622 Homo sapiens mRNA; cDNA DKFZp686F13142 ... 40 8.3
60ref|NM_015170.1| Homo sapiens sulfatase 1 (SULF1), mRNA 40 8.3
61dbj|AB029000.1| Homo sapiens mRNA for KIAA1077 protein, partial cds 40 8.3
62dbj|AK074873.1| Homo sapiens cDNA FLJ90392 fis, clone NT2RP20055... 40 8.3
63dbj|AK055607.1| Homo sapiens cDNA FLJ31045 fis, clone HSYRA20002... 40 8.3
64gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, comp... 40 8.3
65emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in... 40 8.3
66gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chrom... 40 8.3
67gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome... 40 8.3
68gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, c... 40 8.3
69gb|AC148670.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.3
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
71dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 8.3
72gb|AC015550.19| Homo sapiens 12 BAC RP11-254B13 (Roswell Park Ca... 40 8.3
73gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, comple... 40 8.3
74gb|AY101175.1| Homo sapiens extracellular sulfatase SULF-1 mRNA,... 40 8.3
75dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.3
76dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
77gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete s... 40 8.3
78dbj|AK106540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
79dbj|AK103479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
80emb|BX005137.9| Zebrafish DNA sequence from clone CH211-167L17 i... 40 8.3
81emb|AL732539.6| Mouse DNA sequence from clone RP23-255E6 on chro... 40 8.3
82gb|AC154292.1| Mus musculus BAC clone RP24-488N1 from 16, comple... 40 8.3
83gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, comple... 40 8.3
84emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chro... 40 8.3 
>dbj|AK120241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F20, full
            insert sequence
          Length = 3072

 Score =  355 bits (179), Expect = 1e-94
 Identities = 269/299 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 373
            |||| ||||||||||||||||||||||| || |||||||  ||||  ||||||||||| |
Sbjct: 2565 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 2506

                                                                        
Query: 374  tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 433
            |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 2505 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 2446

                                                                        
Query: 434  cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 493
            |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 2445 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 2386

                                                                        
Query: 494  catgttcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaa 553
            |||||||| |||| ||||| |||||||||||| ||||||| | ||||| |||||  ||||
Sbjct: 2385 catgttcaacaaatccatacacatatgtgttcctcacaggaatacgcaactcactcgcaa 2326

                                                                       
Query: 554  cctccagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
            |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 cctcaagaacattcctggaagcacccagttcacccataccatagcccctaactgagtaa 2267
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>dbj|AK062000.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D04, full
            insert sequence
          Length = 1561

 Score =  347 bits (175), Expect = 3e-92
 Identities = 268/299 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 373
            |||| |||| |||||||||||||||||| || |||||||  ||||  ||||||||||| |
Sbjct: 1131 ttcaaaatccctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 1072

                                                                        
Query: 374  tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 433
            |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 1071 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 1012

                                                                        
Query: 434  cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 493
            |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 1011 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 952

                                                                        
Query: 494  catgttcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaa 553
            |||||||| |||| ||||| |||||||||||| ||||||| | ||||| |||||  ||||
Sbjct: 951  catgttcaacaaatccatacacatatgtgttcctcacaggaatacgcaactcactcgcaa 892

                                                                       
Query: 554  cctccagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
            |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 891  cctcaagaacattcctggaagcacccagttcacccataccatagcccctaactgagtaa 833
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>ref|NM_187508.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3822

 Score =  276 bits (139), Expect = 8e-71
 Identities = 202/223 (90%)
 Strand = Plus / Minus

                                                                        
Query: 390  caagccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactc 449
            |||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||
Sbjct: 2379 caagccaagcttgacgccaagaccatatgatgacccatgaccaacccgtcggaagaactc 2320

                                                                        
Query: 450  agtagggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaacc 509
             || |||||||||||||| ||||||||||| |||||||| |||||||||||| |||| ||
Sbjct: 2319 tgtggggttccctttcacatccttggaactgccaaggtcagtgccatgttcaacaaatcc 2260

                                                                        
Query: 510  ataaacatatgtgttcttcacaggtacacgcacctcaccagcaacctccagaacattcct 569
            ||| |||||||||||| ||||||| | ||||| |||||  |||||||| |||||||||||
Sbjct: 2259 atacacatatgtgttcctcacaggaatacgcaactcactcgcaacctcaagaacattcct 2200

                                                       
Query: 570  agatgcacccagttcacccataccatagcccctaactgagtaa 612
             || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2199 ggaagcacccagttcacccataccatagcccctaactgagtaa 2157
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  268 bits (135), Expect = 2e-68
 Identities = 216/243 (88%)
 Strand = Plus / Minus

                                                                           
Query: 314     ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 373
               |||| ||||||||||||||||||||||| || |||||||  ||||  ||||||||||| |
Sbjct: 9045718 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 9045659

                                                                           
Query: 374     tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 433
               |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 9045658 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 9045599

                                                                           
Query: 434     cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 493
               |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 9045598 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 9045539

                                                                           
Query: 494     catgttcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaa 553
               |||||||| |||| ||||| |||||||||||| ||||||| | ||||| |||||  ||||
Sbjct: 9045538 catgttcaacaaatccatacacatatgtgttcctcacaggaatacgcaactcactcgcaa 9045479

                  
Query: 554     cct 556
               |||
Sbjct: 9045478 cct 9045476



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 553     acctccagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
               ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 9044948 acctcaagaacattcctggaagcacccagttcacccataccatagcccctaactgagtaa 9044889
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score =  268 bits (135), Expect = 2e-68
 Identities = 216/243 (88%)
 Strand = Plus / Minus

                                                                         
Query: 314   ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 373
             |||| ||||||||||||||||||||||| || |||||||  ||||  ||||||||||| |
Sbjct: 52754 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 52695

                                                                         
Query: 374   tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 433
             |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 52694 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 52635

                                                                         
Query: 434   cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 493
             |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 52634 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 52575

                                                                         
Query: 494   catgttcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaa 553
             |||||||| |||| ||||| |||||||||||| ||||||| | ||||| |||||  ||||
Sbjct: 52574 catgttcaacaaatccatacacatatgtgttcctcacaggaatacgcaactcactcgcaa 52515

                
Query: 554   cct 556
             |||
Sbjct: 52514 cct 52512



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                         
Query: 553   acctccagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
             ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 51984 acctcaagaacattcctggaagcacccagttcacccataccatagcccctaactgagtaa 51925
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  268 bits (135), Expect = 2e-68
 Identities = 216/243 (88%)
 Strand = Plus / Minus

                                                                           
Query: 314     ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 373
               |||| ||||||||||||||||||||||| || |||||||  ||||  ||||||||||| |
Sbjct: 9043551 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 9043492

                                                                           
Query: 374     tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 433
               |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 9043491 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 9043432

                                                                           
Query: 434     cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 493
               |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 9043431 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 9043372

                                                                           
Query: 494     catgttcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaa 553
               |||||||| |||| ||||| |||||||||||| ||||||| | ||||| |||||  ||||
Sbjct: 9043371 catgttcaacaaatccatacacatatgtgttcctcacaggaatacgcaactcactcgcaa 9043312

                  
Query: 554     cct 556
               |||
Sbjct: 9043311 cct 9043309



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 553     acctccagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
               ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 9042781 acctcaagaacattcctggaagcacccagttcacccataccatagcccctaactgagtaa 9042722
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>gb|BT024136.1| Zea mays clone EL01N0445G05 mRNA sequence
          Length = 1753

 Score =  188 bits (95), Expect = 1e-44
 Identities = 246/295 (83%), Gaps = 1/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 319  aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 378
            |||||||| ||||||||||| || ||||| ||||  ||||  ||||||||||| ||||||
Sbjct: 1493 aatctctcaccaaatctgaaaaaaacggtcccagtaccagcattgtgatctacgatgtac 1434

                                                                        
Query: 379  tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 438
            ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || || || 
Sbjct: 1433 tctccccttaccaacccaagcttgacgccaacgccatatgaagatccatgacctacgcgc 1374

                                                                        
Query: 439  cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 498
            | ||| ||||| |||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct: 1373 ctgaaaaactccgtagggtttcctttcacgtccttggaacttccaaggtcagtcccatgt 1314

                                                                        
Query: 499  tcagcaaaaccataaac-atatgtgttcttcacaggtacacgcacctcaccagcaacctc 557
            ||||||||  |||| ||  |  |||||  | | ||| ||||||| ||||  ||||| |||
Sbjct: 1313 tcagcaaatgcatacacggtgggtgtttcttatagggacacgcaactcagtagcaagctc 1254

                                                                   
Query: 558  cagaacattcctagatgcacccagttcacccataccatagcccctaactgagtaa 612
             |||| ||||||||| || |||||||||||  ||| | |||||||||| ||||||
Sbjct: 1253 aagaatattcctagaagcgcccagttcaccattactaaagcccctaacagagtaa 1199
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>gb|AY111022.1| Zea mays CL10149_2 mRNA sequence
          Length = 557

 Score =  155 bits (78), Expect = 2e-34
 Identities = 220/269 (81%)
 Strand = Plus / Plus

                                                                       
Query: 319 aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 378
           |||||||| |||||||||||||| |  |||||||  ||||  ||||||||||| ||||||
Sbjct: 280 aatctctcaccaaatctgaagaaaatagttccagtaccagcattgtgatctacgatgtac 339

                                                                       
Query: 379 tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 438
           ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || || || 
Sbjct: 340 tctccccttaccaacccaagcttgacgccaacgccatatgaagatccatgacctacgcgc 399

                                                                       
Query: 439 cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 498
           | |     ||| |||||||| ||||| |||||||||||||| |||||| | || ||||||
Sbjct: 400 ctgnnnnnctccgtagggtttcctttgacgtccttggaacttccaagggcagtcccatgt 459

                                                                       
Query: 499 tcagcaaaaccataaacatatgtgttcttcacaggtacacgcacctcaccagcaacctcc 558
           ||||||||  |||| || |  |||||  | | ||| ||||||| ||||  ||||| ||| 
Sbjct: 460 tcagcaaatgcatacacgtgggtgtttcttatagggacacgcaactcagtagcaagctca 519

                                        
Query: 559 agaacattcctagatgcacccagttcacc 587
           |||| ||||||||| || |||||||||||
Sbjct: 520 agaatattcctagaagcgcccagttcacc 548
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>gb|AY112579.1| Zea mays CL10149_-1 mRNA sequence
          Length = 549

 Score =  149 bits (75), Expect = 1e-32
 Identities = 154/182 (84%)
 Strand = Plus / Plus

                                                                       
Query: 319 aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 378
           |||||||| |||||||||||||| |  |||||||  ||||  ||||||||||||||| ||
Sbjct: 205 aatctctcaccaaatctgaagaaaatagttccagtaccagcattgtgatctacaatggac 264

                                                                       
Query: 379 tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 438
           ||||| |||||||| ||||||||||| |||||||||||||| |||||||| ||||| || 
Sbjct: 265 tctccccttaccaacccaagcttgacaccaacaccatatgaagatccatgaccaacacgc 324

                                                                       
Query: 439 cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 498
           | |     ||| |||||||||||||| || |||||||||||||||||| | || ||||||
Sbjct: 325 ctgnnnnnctctgtagggttccctttgacatccttggaactcccaagggcagtcccatgt 384

             
Query: 499 tc 500
           ||
Sbjct: 385 tc 386
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Plus

                                                                          
Query: 394    ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 453
              ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| |||||||||
Sbjct: 779126 ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 779185

                                                                   
Query: 454    gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 506
              |||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 779186 gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 779238



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 553    acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
              ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 779457 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 779512
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Plus

                                                                          
Query: 394    ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 453
              ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| |||||||||
Sbjct: 779126 ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 779185

                                                                   
Query: 454    gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 506
              |||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 779186 gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 779238



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 553    acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
              ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 779457 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 779512
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>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23
            of library OSJNBb from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 12281

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Plus

                                                                        
Query: 394  ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 453
            ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| |||||||||
Sbjct: 898  ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 957

                                                                 
Query: 454  gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 506
            |||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 958  gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 1010



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 553  acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
            ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 1229 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 1284
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>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0004B05, complete sequence
          Length = 121223

 Score =  107 bits (54), Expect = 4e-20
 Identities = 156/190 (82%)
 Strand = Plus / Plus

                                                                         
Query: 317   agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 376
             |||||||||| |||||||| ||||||| ||  || |  ||||  |||||||| |||   |
Sbjct: 16599 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 16658

                                                                         
Query: 377   actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 436
             ||||| | ||||||   ||||||||||| || || ||||| || || ||||||||||| |
Sbjct: 16659 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 16718

                                                                         
Query: 437   gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 496
             ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || |||||||
Sbjct: 16719 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 16778

                       
Query: 497   gttcagcaaa 506
             | ||||||||
Sbjct: 16779 gctcagcaaa 16788



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 553   acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
             ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 17013 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 17068
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  107 bits (54), Expect = 4e-20
 Identities = 156/190 (82%)
 Strand = Plus / Plus

                                                                          
Query: 317    agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 376
              |||||||||| |||||||| ||||||| ||  || |  ||||  |||||||| |||   |
Sbjct: 738307 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 738366

                                                                          
Query: 377    actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 436
              ||||| | ||||||   ||||||||||| || || ||||| || || ||||||||||| |
Sbjct: 738367 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 738426

                                                                          
Query: 437    gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 496
              ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || |||||||
Sbjct: 738427 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 738486

                        
Query: 497    gttcagcaaa 506
              | ||||||||
Sbjct: 738487 gctcagcaaa 738496



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 553    acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
              ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 738721 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 738776
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>dbj|AK070010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G17, full
            insert sequence
          Length = 2064

 Score =  107 bits (54), Expect = 4e-20
 Identities = 156/190 (82%)
 Strand = Plus / Minus

                                                                        
Query: 317  agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 376
            |||||||||| |||||||| ||||||| ||  || |  ||||  |||||||| |||   |
Sbjct: 2054 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 1995

                                                                        
Query: 377  actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 436
            ||||| | ||||||   ||||||||||| || || ||||| || || ||||||||||| |
Sbjct: 1994 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 1935

                                                                        
Query: 437  gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 496
            ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || |||||||
Sbjct: 1934 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 1875

                      
Query: 497  gttcagcaaa 506
            | ||||||||
Sbjct: 1874 gctcagcaaa 1865



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 550  gcaacctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
            |||||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 1809 gcaacctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 1751
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  107 bits (54), Expect = 4e-20
 Identities = 156/190 (82%)
 Strand = Plus / Plus

                                                                          
Query: 317    agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 376
              |||||||||| |||||||| ||||||| ||  || |  ||||  |||||||| |||   |
Sbjct: 738308 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 738367

                                                                          
Query: 377    actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 436
              ||||| | ||||||   ||||||||||| || || ||||| || || ||||||||||| |
Sbjct: 738368 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 738427

                                                                          
Query: 437    gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 496
              ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || |||||||
Sbjct: 738428 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 738487

                        
Query: 497    gttcagcaaa 506
              | ||||||||
Sbjct: 738488 gctcagcaaa 738497



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 553    acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
              ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 738722 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 738777
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 181322

 Score =  107 bits (54), Expect = 4e-20
 Identities = 156/190 (82%)
 Strand = Plus / Minus

                                                                        
Query: 317  agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 376
            |||||||||| |||||||| ||||||| ||  || |  ||||  |||||||| |||   |
Sbjct: 4665 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 4606

                                                                        
Query: 377  actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 436
            ||||| | ||||||   ||||||||||| || || ||||| || || ||||||||||| |
Sbjct: 4605 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 4546

                                                                        
Query: 437  gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 496
            ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || |||||||
Sbjct: 4545 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 4486

                      
Query: 497  gttcagcaaa 506
            | ||||||||
Sbjct: 4485 gctcagcaaa 4476



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 553  acctccagaacattcctagatgcacccagttcacccataccatagcccctaactga 608
            ||||| |||| ||| || || ||||||| |||||||||||| |||||||| |||||
Sbjct: 4251 acctcaagaagatttctggaagcacccaattcacccataccgtagccccttactga 4196
to top
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete
              sequence
          Length = 183230

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                               
Query: 167    ttcctcagaaaaagaacaaaacttcattattca 199
              ||||| |||||||||||||||||||||||||||
Sbjct: 111884 ttcctgagaaaaagaacaaaacttcattattca 111916
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>gb|AC084024.17| Homo sapiens chromosome 8, clone RP11-90P5, complete sequence
          Length = 135404

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 167    ttcctcagaaaaagaacaaaact 189
              |||||||||||||||||||||||
Sbjct: 120617 ttcctcagaaaaagaacaaaact 120639
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>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22,
              complete sequence
          Length = 166346

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 167    ttcctcagaaaaagaacaaaacttcattatt 197
              ||||| |||||||||||||||||| ||||||
Sbjct: 142730 ttcctgagaaaaagaacaaaactttattatt 142700
to top
>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201794

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   tcttcctcagaaaaagaacaaa 186
             ||||||||||||||||||||||
Sbjct: 13604 tcttcctcagaaaaagaacaaa 13625
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>ref|NM_116977.2| Arabidopsis thaliana unknown protein AT4G09080 mRNA, complete cds
          Length = 1584

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 457  ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
            ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 1180 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 1121

                             
Query: 517  tatgtgttcttcacagg 533
            | ||||||||| |||||
Sbjct: 1120 tgtgtgttcttgacagg 1104
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>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence
          Length = 234874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 145    ccctgacactaacttatctct 165
              |||||||||||||||||||||
Sbjct: 200630 ccctgacactaacttatctct 200610
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>emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on chromosome 1 Contains the
             3' end of the ADAM15 gene for a disintegrin and
             metalloproteinase domain 15 (metargidin), the EFNA4 gene
             for ephrin-A4, the EFNA3 gene for ephrin-A3, the EFNA1
             gene for ephrin-A1, the gene for a novel protein
             (LOC55974), the DPM3 gene for dolichyl-phosphate
             mannosyltransferase polypeptide 3 and four CpG islands,
             complete sequence
          Length = 92095

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   cagaaaaagaacaaaacttca 192
             |||||||||||||||||||||
Sbjct: 19998 cagaaaaagaacaaaacttca 19978
to top
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part
             of a variant of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 171852

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   caattgtgcattagacatccc 282
             |||||||||||||||||||||
Sbjct: 92999 caattgtgcattagacatccc 93019
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>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence
          Length = 158066

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 20   ttgaccatgacagaaagcctt 40
            |||||||||||||||||||||
Sbjct: 8508 ttgaccatgacagaaagcctt 8528
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>gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, complete sequence
          Length = 165127

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 90     ccagcttgaagctctgcaagataaa 114
              |||| ||||||||||||||||||||
Sbjct: 118136 ccagattgaagctctgcaagataaa 118112
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>gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome 14, complete sequence
          Length = 215474

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    tatctctcttcctcagaaaaa 179
              |||||||||||||||||||||
Sbjct: 171661 tatctctcttcctcagaaaaa 171641
to top
>emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 26
          Length = 199754

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 457   ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
             ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 18319 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 18260

                              
Query: 517   tatgtgttcttcacagg 533
             | ||||||||| |||||
Sbjct: 18259 tgtgtgttcttgacagg 18243
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>gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, complete sequence
          Length = 213246

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    ttgaccatgacagaaagcctt 40
             |||||||||||||||||||||
Sbjct: 55531 ttgaccatgacagaaagcctt 55511
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>gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosome 14, complete sequence
          Length = 191733

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    tatctctcttcctcagaaaaa 179
              |||||||||||||||||||||
Sbjct: 155231 tatctctcttcctcagaaaaa 155251
to top
>gb|AC091525.17| Homo sapiens 12 BAC RP11-490N22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 129740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   tcctcagaaaaagaacaaaacttca 192
             |||| ||||||||||||||||||||
Sbjct: 55398 tcctaagaaaaagaacaaaacttca 55422
to top
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence
          Length = 193884

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   cctgacactaacttatctctc 166
             |||||||||||||||||||||
Sbjct: 86271 cctgacactaacttatctctc 86251
to top
>gb|AY585655.1| Arabidopsis thaliana chloroplast outer membrane protein (TOC75) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1466

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 457  ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
            ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 1180 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 1121

                             
Query: 517  tatgtgttcttcacagg 533
            | ||||||||| |||||
Sbjct: 1120 tgtgtgttcttgacagg 1104
to top
>emb|BX827624.1|CNS0A4MU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS86ZG12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 758

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                       
Query: 457 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
           ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 355 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 296

                            
Query: 517 tatgtgttcttcacagg 533
           | ||||||||| |||||
Sbjct: 295 tgtgtgttcttgacagg 279
to top
>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167875

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   gaagaagacggttccagcccc 356
             |||||||||||||||||||||
Sbjct: 65950 gaagaagacggttccagcccc 65970
to top
>gb|AC025157.18| Homo sapiens 12 BAC RP11-401I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 143417

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   tcctcagaaaaagaacaaaacttca 192
             |||| ||||||||||||||||||||
Sbjct: 69068 tcctaagaaaaagaacaaaacttca 69092
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>emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-545M17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 265   ttgtgcattagacatcccagtcttg 289
             ||||| |||||||||||||||||||
Sbjct: 21623 ttgtggattagacatcccagtcttg 21647
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>emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-407N17 of library RPCI-11
           from chromosome 14 of Homo sapiens (Human), complete
           sequence
          Length = 196319

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 265 ttgtgcattagacatcccagtcttg 289
           ||||| |||||||||||||||||||
Sbjct: 476 ttgtggattagacatcccagtcttg 452
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>gb|AC005359.1|AC005359 REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ  CHECK: 2754  FROM: 1  TO: 93489,
             complete sequence
          Length = 93489

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 457   ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
             ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 58293 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 58234

                              
Query: 517   tatgtgttcttcacagg 533
             | ||||||||| |||||
Sbjct: 58233 tgtgtgttcttgacagg 58217
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>gb|AF072897.1|AF072897 Arabidopsis thaliana BAC T8A17 chromosome IV, complete sequence
          Length = 83078

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 457   ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 516
             ||||||||||| ||||| ||||| || |  ||| | ||||| ||||||||  |||| |||
Sbjct: 72068 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 72127

                              
Query: 517   tatgtgttcttcacagg 533
             | ||||||||| |||||
Sbjct: 72128 tgtgtgttcttgacagg 72144
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>gb|AC134843.4| Mus musculus BAC clone RP24-388C21 from 3, complete sequence
          Length = 205200

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 145    ccctgacactaacttatctct 165
              |||||||||||||||||||||
Sbjct: 178177 ccctgacactaacttatctct 178197
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>gb|AC152109.1| Pichia stipitis clone JGIAHYZ-13H12, complete sequence
          Length = 40187

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aacaaattgaccatgacaga 33
             ||||||||||||||||||||
Sbjct: 11049 aacaaattgaccatgacaga 11030
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>ref|XM_528159.1| PREDICTED: Pan troglodytes similar to mKIAA1077 protein (LOC472787),
            mRNA
          Length = 3414

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2201 ttgaagctctgcaagataaa 2220
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>ref|XM_477671.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3292

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   gcttgaagctctgcaagata 112
            ||||||||||||||||||||
Sbjct: 2274 gcttgaagctctgcaagata 2293
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>ref|XM_363152.1| Magnaporthe grisea 70-15 hypothetical protein (MG08736.4) partial
           cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 395 caagcttgacgccaacacca 414
           ||||||||||||||||||||
Sbjct: 438 caagcttgacgccaacacca 457
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>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
              complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    aacaaaacttcattattcag 200
              ||||||||||||||||||||
Sbjct: 160795 aacaaaacttcattattcag 160776
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>gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome 8, complete sequence
          Length = 257765

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   caacctccagaacattccta 570
             ||||||||||||||||||||
Sbjct: 39904 caacctccagaacattccta 39885
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>gb|AC006026.2| Homo sapiens BAC clone GS1-96J14 from 7, complete sequence
          Length = 149869

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   aaaaagaacaaaacttcatt 194
             ||||||||||||||||||||
Sbjct: 44672 aaaaagaacaaaacttcatt 44691
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>emb|AL450426.7| Human DNA sequence from clone RP11-317C20 on chromosome 9 Contains five
              novel olfactory (seven transmembrane helix) receptor genes,
              a pseudogene similar to part of novel olfactory (seven
              transmembrane helix) receptor and a CpG island, complete
              sequence
          Length = 136002

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 493    ccatgttcagcaaaaccata 512
              ||||||||||||||||||||
Sbjct: 105533 ccatgttcagcaaaaccata 105552
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 387     taccaagccaagcttgacgc 406
               ||||||||||||||||||||
Sbjct: 4325873 taccaagccaagcttgacgc 4325892
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>emb|AL136086.8| Human DNA sequence from clone GS1-56G5 on chromosome 1, complete
            sequence
          Length = 103347

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ttatctctcttcctcagaaa 177
            ||||||||||||||||||||
Sbjct: 3909 ttatctctcttcctcagaaa 3928
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>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC
             Library) complete sequence
          Length = 146175

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   aacaaaacttcattattcag 200
             ||||||||||||||||||||
Sbjct: 34009 aacaaaacttcattattcag 33990
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>emb|AL096819.17|HSDJ53A19 Human DNA sequence from clone RP1-53A19 on chromosome 1q25.1-31.1
             Contains the C1orf22 gene for chromosome 1 open reading
             frame 22, the 3' end of the C1orf24 gene for chromosome 1
             open reading frame 24 and a CpG island, complete sequence
          Length = 136188

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   ttatctctcttcctcagaaa 177
             ||||||||||||||||||||
Sbjct: 81385 ttatctctcttcctcagaaa 81404
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>gb|AF545571.1| Homo sapiens sulfatase SULF1 precursor, mRNA, complete cds
          Length = 5699

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2655 ttgaagctctgcaagataaa 2674
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>gb|BC068565.1| Homo sapiens sulfatase 1, mRNA (cDNA clone MGC:87514 IMAGE:4831138),
            complete cds
          Length = 3019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 1289 ttgaagctctgcaagataaa 1308
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    caaggtcggtgccatgttca 501
              ||||||||||||||||||||
Sbjct: 101246 caaggtcggtgccatgttca 101265
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>emb|BX927069.11| Zebrafish DNA sequence from clone DKEY-24C22 in linkage group 23,
            complete sequence
          Length = 162588

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 30   cagaaagccttgtcaaaacattcc 53
            |||||||| |||||||||||||||
Sbjct: 7173 cagaaagcattgtcaaaacattcc 7196
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>emb|BX571746.1|HSM806622 Homo sapiens mRNA; cDNA DKFZp686F13142 (from clone DKFZp686F13142)
          Length = 4817

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2617 ttgaagctctgcaagataaa 2636
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>ref|NM_015170.1| Homo sapiens sulfatase 1 (SULF1), mRNA
          Length = 5699

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2655 ttgaagctctgcaagataaa 2674
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>dbj|AB029000.1| Homo sapiens mRNA for KIAA1077 protein, partial cds
          Length = 4834

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 1790 ttgaagctctgcaagataaa 1809
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>dbj|AK074873.1| Homo sapiens cDNA FLJ90392 fis, clone NT2RP2005541, weakly similar to
            N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14)
          Length = 3209

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 1026 ttgaagctctgcaagataaa 1045
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>dbj|AK055607.1| Homo sapiens cDNA FLJ31045 fis, clone HSYRA2000255, weakly similar to
            N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14)
          Length = 2554

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2454 ttgaagctctgcaagataaa 2473
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>gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, complete sequence
          Length = 205004

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 165   tcttcctcagaaaaagaacaaaacttca 192
             |||||||||||||| | |||||||||||
Sbjct: 50723 tcttcctcagaaaatgcacaaaacttca 50750
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>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2,
             complete sequence
          Length = 154954

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ccttgtcaaaacattccttg 56
             ||||||||||||||||||||
Sbjct: 51268 ccttgtcaaaacattccttg 51287
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>gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chromosome 7, complete
             sequence
          Length = 187553

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 165   tcttcctcagaaaaagaacaaaacttca 192
             |||||||||||||| | |||||||||||
Sbjct: 99109 tcttcctcagaaaatgcacaaaacttca 99082
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>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence
          Length = 169374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   aagaacaaaacttcattatt 197
             ||||||||||||||||||||
Sbjct: 16867 aagaacaaaacttcattatt 16886
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>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence
          Length = 96875

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   aaagaacaaaacttcattattcag 200
             ||||||||||||||||||| ||||
Sbjct: 23922 aaagaacaaaacttcattaatcag 23899
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>gb|AC148670.1| Macaca mulatta Major Histocompatibility Complex BAC MMU063G23, complete
             sequence
          Length = 189655

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   atgttcagcaaaaccataaa 514
             ||||||||||||||||||||
Sbjct: 38434 atgttcagcaaaaccataaa 38453
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 93       gcttgaagctctgcaagata 112
                ||||||||||||||||||||
Sbjct: 12981573 gcttgaagctctgcaagata 12981592
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 495     atgttcagcaaaaccataaa 514
               ||||||||||||||||||||
Sbjct: 2593950 atgttcagcaaaaccataaa 2593931
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>gb|AC015550.19| Homo sapiens 12 BAC RP11-254B13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 140300

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tgctgaatgaaatgcattca 317
              ||||||||||||||||||||
Sbjct: 130371 tgctgaatgaaatgcattca 130352
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>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence
          Length = 153792

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   ttcagcagaacaaaagccac 215
             ||||||||||||||||||||
Sbjct: 57282 ttcagcagaacaaaagccac 57263
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>gb|AY101175.1| Homo sapiens extracellular sulfatase SULF-1 mRNA, complete cds
          Length = 4669

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttgaagctctgcaagataaa 114
            ||||||||||||||||||||
Sbjct: 2457 ttgaagctctgcaagataaa 2476
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 548     cagcaacctccagaacattc 567
               ||||||||||||||||||||
Sbjct: 1087503 cagcaacctccagaacattc 1087522
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gcttgaagctctgcaagata 112
             ||||||||||||||||||||
Sbjct: 55870 gcttgaagctctgcaagata 55889
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>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence
          Length = 157625

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   aacaaaacttcattattcag 200
             ||||||||||||||||||||
Sbjct: 32188 aacaaaacttcattattcag 32207
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>dbj|AK106540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D11, full
           insert sequence
          Length = 1964

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  gcttgaagctctgcaagata 112
           ||||||||||||||||||||
Sbjct: 909 gcttgaagctctgcaagata 928
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>dbj|AK103479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130E20, full
            insert sequence
          Length = 3292

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   gcttgaagctctgcaagata 112
            ||||||||||||||||||||
Sbjct: 2274 gcttgaagctctgcaagata 2293
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>emb|BX005137.9| Zebrafish DNA sequence from clone CH211-167L17 in linkage group 21,
             complete sequence
          Length = 156370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccttgtcaaaacattccttg 56
             ||||||||||||||||||||
Sbjct: 56391 ccttgtcaaaacattccttg 56372
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>emb|AL732539.6| Mouse DNA sequence from clone RP23-255E6 on chromosome 11 Contains the
             3' end of the Msi2h gene for Musashi homolog 2
             (Drosophila), an eukaryotic translation elongation factor
             2 (Eef2) pseudogene and a ribosomal protein L35a (Rpl35a)
             pseudogene, complete sequence
          Length = 216688

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ttgtcaaaacattccttgct 58
             ||||||||||||||||||||
Sbjct: 88503 ttgtcaaaacattccttgct 88484
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>gb|AC154292.1| Mus musculus BAC clone RP24-488N1 from 16, complete sequence
          Length = 192613

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    aagaacaaaacttcattatt 197
              ||||||||||||||||||||
Sbjct: 184990 aagaacaaaacttcattatt 185009
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>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence
          Length = 200157

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    tgttcagcaaaaccataaac 515
              ||||||||||||||||||||
Sbjct: 116056 tgttcagcaaaaccataaac 116037
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>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete
             sequence
          Length = 157624

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   cctgacactaacttatctctcttc 169
             |||| |||||||||||||||||||
Sbjct: 17296 cctggcactaacttatctctcttc 17319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,949,169
Number of Sequences: 3902068
Number of extensions: 5949169
Number of successful extensions: 123707
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123258
Number of HSP's gapped (non-prelim): 447
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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