| Clone Name | rbags11a17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CRBN_PONPY (Q5R6Y2) Protein cereblon | 110 | 3e-24 | 2 | CRBN_HUMAN (Q96SW2) Protein cereblon | 110 | 3e-24 | 3 | CRBN_RAT (Q56AP7) Protein cereblon | 107 | 2e-23 | 4 | CRBN_MOUSE (Q8C7D2) Protein cereblon (Protein PiL) | 107 | 2e-23 | 5 | CRBN_XENTR (Q640S2) Protein cereblon | 101 | 2e-21 | 6 | CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor | 32 | 1.6 | 7 | DSBD1_PSEAE (Q9HUW5) Thiol:disulfide interchange protein dsbD 1 ... | 32 | 2.0 | 8 | TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin) | 31 | 3.5 | 9 | FZD10_MOUSE (Q8BKG4) Frizzled 10 precursor (Frizzled-10) (Fz-10) | 31 | 3.5 |
|---|
>CRBN_PONPY (Q5R6Y2) Protein cereblon| Length = 429 Score = 110 bits (275), Expect = 3e-24 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%) Frame = -2 Query: 629 SDVVVMSSDGPLGTYVNNHGYVHATITVNNATGLDIEGDPTEEHSWFPGYAWTIASCSSC 450 +++ +S GP+ YVN HGYVH T+TV A L++ G P+ EHSWFPGYAWT+A C C Sbjct: 322 NEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKIC 381 Query: 449 DSNIGWLFTATKRYLHPKFFWGI-RSCQIADIVD 351 S+IGW FTATK+ + P+ FWG+ RS + I D Sbjct: 382 ASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPD 415
>CRBN_HUMAN (Q96SW2) Protein cereblon| Length = 442 Score = 110 bits (275), Expect = 3e-24 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%) Frame = -2 Query: 629 SDVVVMSSDGPLGTYVNNHGYVHATITVNNATGLDIEGDPTEEHSWFPGYAWTIASCSSC 450 +++ +S GP+ YVN HGYVH T+TV A L++ G P+ EHSWFPGYAWT+A C C Sbjct: 335 NEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKIC 394 Query: 449 DSNIGWLFTATKRYLHPKFFWGI-RSCQIADIVD 351 S+IGW FTATK+ + P+ FWG+ RS + I D Sbjct: 395 ASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPD 428
>CRBN_RAT (Q56AP7) Protein cereblon| Length = 445 Score = 107 bits (268), Expect = 2e-23 Identities = 45/83 (54%), Positives = 60/83 (72%) Frame = -2 Query: 629 SDVVVMSSDGPLGTYVNNHGYVHATITVNNATGLDIEGDPTEEHSWFPGYAWTIASCSSC 450 +++ +S GP+ YVN HGYVH T+TV A+ L++ G P+ HSWFPGYAWTIA C C Sbjct: 338 NEIFSLSLCGPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKIC 397 Query: 449 DSNIGWLFTATKRYLHPKFFWGI 381 S+IGW FTATK+ + P+ FWG+ Sbjct: 398 ASHIGWKFTATKKDMSPQKFWGL 420
>CRBN_MOUSE (Q8C7D2) Protein cereblon (Protein PiL)| Length = 445 Score = 107 bits (268), Expect = 2e-23 Identities = 45/83 (54%), Positives = 60/83 (72%) Frame = -2 Query: 629 SDVVVMSSDGPLGTYVNNHGYVHATITVNNATGLDIEGDPTEEHSWFPGYAWTIASCSSC 450 +++ +S GP+ YVN HGYVH T+TV A+ L++ G P+ HSWFPGYAWTIA C C Sbjct: 338 NEIFSLSLCGPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKIC 397 Query: 449 DSNIGWLFTATKRYLHPKFFWGI 381 S+IGW FTATK+ + P+ FWG+ Sbjct: 398 ASHIGWKFTATKKDMSPQKFWGL 420
>CRBN_XENTR (Q640S2) Protein cereblon| Length = 447 Score = 101 bits (252), Expect = 2e-21 Identities = 42/83 (50%), Positives = 58/83 (69%) Frame = -2 Query: 629 SDVVVMSSDGPLGTYVNNHGYVHATITVNNATGLDIEGDPTEEHSWFPGYAWTIASCSSC 450 +++ +S GP+ YVN HGYVH T+TV A L + G P+ E+SWFPG+AWTIA C C Sbjct: 338 NEIFSLSLCGPMAAYVNPHGYVHETLTVYKAFNLSLVGRPSTENSWFPGFAWTIAQCRVC 397 Query: 449 DSNIGWLFTATKRYLHPKFFWGI 381 S++GW FTA ++ L P+ FWG+ Sbjct: 398 GSHMGWKFTAVRKDLSPQKFWGL 420
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 520 RGIP-QRNTAGFQDTPGLSHRALPATPT*AGCSLPPRGICIR 398 +G P +R + G PGL + LP P AG S PP GI +R Sbjct: 97 KGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGLR 138
>DSBD1_PSEAE (Q9HUW5) Thiol:disulfide interchange protein dsbD 1 precursor (EC| 1.8.1.8) (Protein-disulfide reductase 1) (Disulfide reductase 1) Length = 591 Score = 31.6 bits (70), Expect = 2.0 Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 14/110 (12%) Frame = +3 Query: 249 LSLGSKSAETGKRHNSE--------------RVCCTWRAASFFLLLSCIYNIGDLAAADP 386 +SLG GK+H+ E + A + L+ D P Sbjct: 83 VSLGQVQLPAGKQHHDEYFGDTEVYYNIVDLEIPLNNPARQPYTLVVTYQGCADKGLCYP 142 Query: 387 PEEFRMQIPLGGSEQPAYVGVAGRARCDSPGVSWKPAVFLCGIPLNIKPC 536 PE R I GG+ PA AG+ + G FL G+ L PC Sbjct: 143 PETRRFDID-GGAATPAASDAAGKGPLEHKGKRSLLFFFLAGLTLTFTPC 191
>TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin)| Length = 1353 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +3 Query: 354 YNIGDLAAADPPEEFRMQIPLGGSEQPAYVGVAGRARCDSPGVSWKPAVF--LCGIPLNI 527 +N+ L A P E R+++ +E+PA G A C SP V +P VF + I + + Sbjct: 17 FNLLLLGAVLKPFECRLEVTTEPAERPAVDEEGGLANC-SPPVKEQPMVFHHIYNINVPV 75 Query: 528 KPCC 539 CC Sbjct: 76 DSCC 79
>FZD10_MOUSE (Q8BKG4) Frizzled 10 precursor (Frizzled-10) (Fz-10)| Length = 582 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +3 Query: 387 PEEFRMQIPLGGSEQPAYVGVAGRARCDSPG 479 P FR Q P E P G GRA CD+PG Sbjct: 167 PPLFRPQRPHSAQEHPLKDGGPGRAGCDNPG 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,198,817 Number of Sequences: 219361 Number of extensions: 2182708 Number of successful extensions: 5338 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5338 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)