Clone Information

BLAST Search Result

Clone Name	rbags11a16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK058738.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	438	e-119
2	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	180	4e-42
3	dbj\|AP004753.3\| Oryza sativa (japonica cultivar-group) genomic D...	180	4e-42
4	dbj\|AP005609.3\| Oryza sativa (japonica cultivar-group) genomic D...	180	4e-42
5	gb\|CP000097.1\| Synechococcus sp. CC9902, complete genome	48	0.040
6	gb\|AE004368.1\| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	48	0.040
7	dbj\|BA000019.2\| Nostoc sp. PCC 7120 DNA, complete genome	48	0.040
8	gb\|AE000511.1\| Helicobacter pylori 26695, complete genome	48	0.040
9	ref\|XM_638954.1\| Dictyostelium discoideum threonine-tRNA ligase ...	46	0.16
10	gb\|AC117070.2\| Dictyostelium discoideum chromosome 2 map 2097701...	46	0.16
11	gb\|AE001439.1\| Helicobacter pylori J99, complete genome	46	0.16
12	gb\|AC119670.3\| Oryza sativa (japonica cultivar-group) chromosome...	44	0.62
13	gb\|AC119073.1\| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0...	44	0.62
14	gb\|AC119071.1\| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0...	44	0.62
15	gb\|AC016598.5\|AC016598 Homo sapiens chromosome 5 clone CTD-2050E...	44	0.62
16	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.62
17	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	44	0.62
18	ref\|XM_864216.1\| PREDICTED: Bos taurus similar to threonyl-tRNA ...	42	2.4
19	ref\|XM_872438.1\| PREDICTED: Bos taurus similar to threonyl-tRNA ...	42	2.4
20	ref\|XM_603703.2\| PREDICTED: Bos taurus similar to threonyl-tRNA ...	42	2.4
21	ref\|XM_711446.1\| Candida albicans SC5314 hypothetical protein (C...	42	2.4
22	ref\|XM_711391.1\| Candida albicans SC5314 hypothetical protein (C...	42	2.4
23	gb\|AC007030.3\| Homo sapiens PAC clone RP5-1112I4 from 7, complet...	42	2.4
24	emb\|CR759843.7\| Zebrafish DNA sequence from clone DKEYP-82B4 in ...	42	2.4
25	emb\|AL445201.14\| Human DNA sequence from clone RP11-358L16 on ch...	42	2.4
26	emb\|CR749167.8\| Zebrafish DNA sequence from clone DKEY-23A17 in ...	42	2.4
27	emb\|AL646052.1\| Ralstonia solanacearum GMI1000 chromosome comple...	42	2.4
28	gb\|CP000057.1\| Haemophilus influenzae strain 86-028NP, complete ...	40	9.7
29	gb\|CP000070.1\| Trypanosoma brucei chromosome 7, complete sequence	40	9.7
30	gb\|AC105378.10\| Trypanosoma brucei chromosome 7 clone RPCI93-27E...	40	9.7
31	ref\|XM_416398.1\| PREDICTED: Gallus gallus similar to Ubl carboxy...	40	9.7
32	gb\|AE006095.1\| Pasteurella multocida subsp. multocida str. Pm70 ...	40	9.7
33	ref\|XM_715011.1\| Candida albicans SC5314 RNA polymerase III init...	40	9.7
34	ref\|XM_714879.1\| Candida albicans SC5314 RNA polymerase III init...	40	9.7
35	gb\|AE017244.1\| Mycoplasma hyopneumoniae 7448, complete genome	40	9.7
36	gb\|AE017243.1\| Mycoplasma hyopneumoniae J, complete genome	40	9.7
37	ref\|XM_820582.1\| Trypanosoma brucei TREU927 clone RPCI93-27E10 h...	40	9.7
38	gb\|AC116651.6\| Homo sapiens BAC clone RP11-799M12 from 4, comple...	40	9.7
39	gb\|AE014075.1\| Escherichia coli CFT073, complete genome	40	9.7
40	gb\|CP000243.1\| Escherichia coli UTI89, complete genome	40	9.7
41	gb\|AY242077.1\| Cucurbit yellow stunting disorder virus isolate A...	40	9.7
42	gb\|U00096.2\| Escherichia coli K-12 MG1655, complete genome	40	9.7
43	gb\|AE017342.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	9.7
44	gb\|AC091959.3\| Homo sapiens chromosome 5 clone RP11-449H3, compl...	40	9.7
45	dbj\|AP009048.1\| Escherichia coli W3110 DNA, complete genome	40	9.7
46	ref\|NM_012161.2\| Homo sapiens F-box and leucine-rich repeat prot...	40	9.7
47	ref\|NM_033535.2\| Homo sapiens F-box and leucine-rich repeat prot...	40	9.7
48	gb\|AC103870.3\| Homo sapiens chromosome 11, clone RP11-702L21, co...	40	9.7
49	gb\|AC103873.2\| Homo sapiens chromosome 11, clone RP11-768H8, com...	40	9.7
50	emb\|CR389337.1\| Gallus gallus finished cDNA, clone ChEST724l4	40	9.7
51	dbj\|AK031322.1\| Mus musculus 13 days embryo male testis cDNA, RI...	40	9.7
52	emb\|CR354286.1\| Gallus gallus finished cDNA, clone ChEST302b16	40	9.7
53	gb\|AF157323.1\|AF157323 Homo sapiens p45SKP2-like protein mRNA, c...	40	9.7
54	emb\|AJ537493.1\|CME537493 Cucurbit yellow stunting disorder virus...	40	9.7
55	emb\|AL663098.8\| Mouse DNA sequence from clone RP23-24L23 on chro...	40	9.7
56	gb\|AF140575.1\|AF140575 Mycoplasma hyopneumoniae enzyme I (PTSI) ...	40	9.7
57	gb\|AY103693.1\| Zea mays PCO073595 mRNA sequence	40	9.7
58	gb\|U73857.1\|ECU73857 Escherichia coli chromosome minutes 6-8	40	9.7
59	gb\|AC131029.6\| Mus musculus chromosome 14, clone RP23-304N24, co...	40	9.7
60	gb\|AE017332.1\| Mycoplasma hyopneumoniae 232, complete genome	40	9.7
61	gb\|L42023.1\| Haemophilus influenzae Rd KW20, complete genome	40	9.7
62	gb\|AE005174.2\| Escherichia coli O157:H7 EDL933, complete genome	40	9.7
63	dbj\|BA000007.2\| Escherichia coli O157:H7 DNA, complete genome	40	9.7
64	gb\|CP000038.1\| Shigella sonnei Ss046, complete genome	40	9.7

>dbj|AK058738.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G05, full
            insert sequence
          Length = 2269

 Score =  438 bits (221), Expect = e-119
 Identities = 426/497 (85%)
 Strand = Plus / Minus

                                                                        
Query: 210  atctccccgttatgcctggacctgatggtgagcgtcctggcctcgacttccttggggcca 269
            ||||||||  |||||||||||||||| ||||| ||||||||||  ||||| || || |||
Sbjct: 2022 atctccccactatgcctggacctgatagtgagggtcctggcctgaacttctttaggccca 1963

                                                                        
Query: 270  acgacagccatcagcggcaccttttgtgtttcggcgtttctgattaacttcggcagacgc 329
            ||||| ||||| |||||||| || |  |||||||| || |  |||| ||| || ||||||
Sbjct: 1962 acgaccgccatgagcggcactttcttcgtttcggcattccgtattagctttggtagacgc 1903

                                                                        
Query: 330  tcgccgtggcatacctcggcgcggatacctcttgatttcagctccgaagccacctcgtta 389
            ||||| || |||||||| || || || ||| |||||||||| || |||||||||||||||
Sbjct: 1902 tcgccatgacatacctcagctcgaatgccttttgatttcagttctgaagccacctcgtta 1843

                                                                        
Query: 390  cagtactgcaactcattgtttgtgacaggtagaatacgggcttgggttggagcaagccaa 449
            ||||| |||| |||||||| ||| |||||||||||||| |||||| |||| |||||||||
Sbjct: 1842 cagtattgcagctcattgtctgtcacaggtagaatacgagcttggattggtgcaagccaa 1783

                                                                        
Query: 450  agtggaaaatcaccagcatagttttcaatgaggatgccnnnnnnncgctccaaagaccca 509
            |||||||||||||||||||||| |||||||||||  ||       || ||||||||||||
Sbjct: 1782 agtggaaaatcaccagcatagtgttcaatgaggacaccaaaaaatcgttccaaagaccca 1723

                                                                        
Query: 510  aggatggctctatgaatcatgataggtcgtttcttctcagtatgcgagtcaacataagtg 569
            ||||| |||||||||||||||||||| |||||||||||  |||  || |  |||||||| 
Sbjct: 1722 aggatagctctatgaatcatgataggccgtttcttctcgctatttgaattgacataagta 1663

                                                                        
Query: 570  atgtcaaaccgttcaggcaaattgaagtcaacctgcacagtggaacattgccattttctt 629
            ||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1662 atgtcaaaccgctcaggtaaattgaaatcgacctgcacagtggaacattgccattttctt 1603

                                                                        
Query: 630  ccaagagcatcctcaattttcaaatcaattttcggaccatagaaagcacctnccccttca 689
            |||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||||||
Sbjct: 1602 ccaagagcatcctcaattttcaaatcaatttttgggccatagaaagcgcctccaccttca 1543

                             
Query: 690  tcaatcgtgtaccccca 706
            |||| | ||||| ||||
Sbjct: 1542 tcaaccttgtactccca 1526

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  180 bits (91), Expect = 4e-42
 Identities = 174/204 (85%)
 Strand = Plus / Plus

                                                                            
Query: 401      ctcattgtttgtgacaggtagaatacgggcttgggttggagcaagccaaagtggaaaatc 460
                |||||||| ||| |||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 19944534 ctcattgtctgtcacaggtagaatacgagcttggattggtgcaagccaaagtggaaaatc 19944593

                                                                            
Query: 461      accagcatagttttcaatgaggatgccnnnnnnncgctccaaagacccaaggatggctct 520
                ||||||||||| |||||||||||  ||       || ||||||||||||||||| |||||
Sbjct: 19944594 accagcatagtgttcaatgaggacaccaaaaaatcgttccaaagacccaaggatagctct 19944653

                                                                            
Query: 521      atgaatcatgataggtcgtttcttctcagtatgcgagtcaacataagtgatgtcaaaccg 580
                ||||||||||||||| |||||||||||  |||  || |  |||||||| |||||||||||
Sbjct: 19944654 atgaatcatgataggccgtttcttctcgctatttgaattgacataagtaatgtcaaaccg 19944713

                                        
Query: 581      ttcaggcaaattgaagtcaacctg 604
                 ||||| |||||||| || |||||
Sbjct: 19944714 ctcaggtaaattgaaatcgacctg 19944737



 Score =  151 bits (76), Expect = 4e-33
 Identities = 99/107 (92%)
 Strand = Plus / Plus

                                                                            
Query: 600      acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 659
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19944800 acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 19944859

                                                               
Query: 660      ttcggaccatagaaagcacctnccccttcatcaatcgtgtaccccca 706
                || || ||||||||||| ||| | |||||||||| | ||||| ||||
Sbjct: 19944860 tttgggccatagaaagcgcctccaccttcatcaaccttgtactccca 19944906



 Score =  115 bits (58), Expect = 2e-22
 Identities = 157/190 (82%)
 Strand = Plus / Plus

                                                                            
Query: 210      atctccccgttatgcctggacctgatggtgagcgtcctggcctcgacttccttggggcca 269
                ||||||||  |||||||||||||||| ||||| |||||||| |  ||||| || || |||
Sbjct: 19944061 atctccccactatgcctggacctgatagtgagggtcctggcttgaacttctttaggccca 19944120

                                                                            
Query: 270      acgacagccatcagcggcaccttttgtgtttcggcgtttctgattaacttcggcagacgc 329
                ||||| ||||| |||||||| || |  |||||||| || |  |||| ||| || ||||||
Sbjct: 19944121 acgaccgccatgagcggcactttcttcgtttcggcattccgtattagctttggtagacgc 19944180

                                                                            
Query: 330      tcgccgtggcatacctcggcgcggatacctcttgatttcagctccgaagccacctcgtta 389
                ||||| || |||||||| || || || ||| |||||||||| || |||||||||||||||
Sbjct: 19944181 tcgccatgacatacctcagctcgaatgccttttgatttcagttctgaagccacctcgtta 19944240

                          
Query: 390      cagtactgca 399
                ||||| ||||
Sbjct: 19944241 cagtattgca 19944250

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>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0508B05
          Length = 166165

 Score =  180 bits (91), Expect = 4e-42
 Identities = 174/204 (85%)
 Strand = Plus / Plus

                                                                          
Query: 401    ctcattgtttgtgacaggtagaatacgggcttgggttggagcaagccaaagtggaaaatc 460
              |||||||| ||| |||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 122135 ctcattgtctgtcacaggtagaatacgagcttggattggtgcaagccaaagtggaaaatc 122194

                                                                          
Query: 461    accagcatagttttcaatgaggatgccnnnnnnncgctccaaagacccaaggatggctct 520
              ||||||||||| |||||||||||  ||       || ||||||||||||||||| |||||
Sbjct: 122195 accagcatagtgttcaatgaggacaccaaaaaatcgttccaaagacccaaggatagctct 122254

                                                                          
Query: 521    atgaatcatgataggtcgtttcttctcagtatgcgagtcaacataagtgatgtcaaaccg 580
              ||||||||||||||| |||||||||||  |||  || |  |||||||| |||||||||||
Sbjct: 122255 atgaatcatgataggccgtttcttctcgctatttgaattgacataagtaatgtcaaaccg 122314

                                      
Query: 581    ttcaggcaaattgaagtcaacctg 604
               ||||| |||||||| || |||||
Sbjct: 122315 ctcaggtaaattgaaatcgacctg 122338



 Score =  151 bits (76), Expect = 4e-33
 Identities = 99/107 (92%)
 Strand = Plus / Plus

                                                                          
Query: 600    acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 659
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122401 acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 122460

                                                             
Query: 660    ttcggaccatagaaagcacctnccccttcatcaatcgtgtaccccca 706
              || || ||||||||||| ||| | |||||||||| | ||||| ||||
Sbjct: 122461 tttgggccatagaaagcgcctccaccttcatcaaccttgtactccca 122507



 Score =  115 bits (58), Expect = 2e-22
 Identities = 157/190 (82%)
 Strand = Plus / Plus

                                                                          
Query: 210    atctccccgttatgcctggacctgatggtgagcgtcctggcctcgacttccttggggcca 269
              ||||||||  |||||||||||||||| ||||| |||||||| |  ||||| || || |||
Sbjct: 121662 atctccccactatgcctggacctgatagtgagggtcctggcttgaacttctttaggccca 121721

                                                                          
Query: 270    acgacagccatcagcggcaccttttgtgtttcggcgtttctgattaacttcggcagacgc 329
              ||||| ||||| |||||||| || |  |||||||| || |  |||| ||| || ||||||
Sbjct: 121722 acgaccgccatgagcggcactttcttcgtttcggcattccgtattagctttggtagacgc 121781

                                                                          
Query: 330    tcgccgtggcatacctcggcgcggatacctcttgatttcagctccgaagccacctcgtta 389
              ||||| || |||||||| || || || ||| |||||||||| || |||||||||||||||
Sbjct: 121782 tcgccatgacatacctcagctcgaatgccttttgatttcagttctgaagccacctcgtta 121841

                        
Query: 390    cagtactgca 399
              ||||| ||||
Sbjct: 121842 cagtattgca 121851

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>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014M17
          Length = 156778

 Score =  180 bits (91), Expect = 4e-42
 Identities = 174/204 (85%)
 Strand = Plus / Plus

                                                                         
Query: 401   ctcattgtttgtgacaggtagaatacgggcttgggttggagcaagccaaagtggaaaatc 460
             |||||||| ||| |||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 48655 ctcattgtctgtcacaggtagaatacgagcttggattggtgcaagccaaagtggaaaatc 48714

                                                                         
Query: 461   accagcatagttttcaatgaggatgccnnnnnnncgctccaaagacccaaggatggctct 520
             ||||||||||| |||||||||||  ||       || ||||||||||||||||| |||||
Sbjct: 48715 accagcatagtgttcaatgaggacaccaaaaaatcgttccaaagacccaaggatagctct 48774

                                                                         
Query: 521   atgaatcatgataggtcgtttcttctcagtatgcgagtcaacataagtgatgtcaaaccg 580
             ||||||||||||||| |||||||||||  |||  || |  |||||||| |||||||||||
Sbjct: 48775 atgaatcatgataggccgtttcttctcgctatttgaattgacataagtaatgtcaaaccg 48834

                                     
Query: 581   ttcaggcaaattgaagtcaacctg 604
              ||||| |||||||| || |||||
Sbjct: 48835 ctcaggtaaattgaaatcgacctg 48858



 Score =  151 bits (76), Expect = 4e-33
 Identities = 99/107 (92%)
 Strand = Plus / Plus

                                                                         
Query: 600   acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 659
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48921 acctgcacagtggaacattgccattttcttccaagagcatcctcaattttcaaatcaatt 48980

                                                            
Query: 660   ttcggaccatagaaagcacctnccccttcatcaatcgtgtaccccca 706
             || || ||||||||||| ||| | |||||||||| | ||||| ||||
Sbjct: 48981 tttgggccatagaaagcgcctccaccttcatcaaccttgtactccca 49027



 Score =  115 bits (58), Expect = 2e-22
 Identities = 157/190 (82%)
 Strand = Plus / Plus

                                                                         
Query: 210   atctccccgttatgcctggacctgatggtgagcgtcctggcctcgacttccttggggcca 269
             ||||||||  |||||||||||||||| ||||| |||||||| |  ||||| || || |||
Sbjct: 48182 atctccccactatgcctggacctgatagtgagggtcctggcttgaacttctttaggccca 48241

                                                                         
Query: 270   acgacagccatcagcggcaccttttgtgtttcggcgtttctgattaacttcggcagacgc 329
             ||||| ||||| |||||||| || |  |||||||| || |  |||| ||| || ||||||
Sbjct: 48242 acgaccgccatgagcggcactttcttcgtttcggcattccgtattagctttggtagacgc 48301

                                                                         
Query: 330   tcgccgtggcatacctcggcgcggatacctcttgatttcagctccgaagccacctcgtta 389
             ||||| || |||||||| || || || ||| |||||||||| || |||||||||||||||
Sbjct: 48302 tcgccatgacatacctcagctcgaatgccttttgatttcagttctgaagccacctcgtta 48361

                       
Query: 390   cagtactgca 399
             ||||| ||||
Sbjct: 48362 cagtattgca 48371

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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 636    gcatcctcaattttcaaatcaattttcggaccatagaaagcacctnccccttcatcaat 694
              |||||||| ||||| |||||||| || || ||||| ||||||||  | |||||||||||
Sbjct: 926566 gcatcctcgatttttaaatcaatcttggggccataaaaagcaccgccaccttcatcaat 926624

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>gb|AE004368.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 25
            of 93 of the complete chromosome
          Length = 10341

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 654  tcaattttcggaccatagaaagcacctnccccttc 688
            |||||||||||||||||||| |||||| | |||||
Sbjct: 9179 tcaattttcggaccatagaacgcaccttcgccttc 9145

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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                           
Query: 579     cgttcaggcaaattgaagtcaacctgcacagtggaacattgccattttcttccaagagca 638
               |||||||| ||||| || || ||||| | |||||||||||||||    |  |||| ||||
Sbjct: 5629696 cgttcaggtaaattaaaatctacctgaatagtggaacattgccagagacgaccaatagca 5629755

                                                                      
Query: 639     tcctcaattttcaaatcaattttcggaccatagaaagcacctnccccttcatcaa 693
               || | |||||| | ||||||||| || ||||| ||||||||  | ||||||||||
Sbjct: 5629756 tcttgaattttgatatcaattttagggccataaaaagcaccaccaccttcatcaa 5629810

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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 666    ccatagaaagcacctnccccttcatcaatcgtgta 700
              ||||||||||| ||| |||||||||||||| ||||
Sbjct: 136454 ccatagaaagcccctcccccttcatcaatcttgta 136420

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>ref|XM_638954.1| Dictyostelium discoideum threonine-tRNA ligase (DDB0231249), partial
            mRNA
          Length = 2097

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 653  atcaattttcggaccatagaaagcacc 679
            ||||||||| |||||||||||||||||
Sbjct: 1518 atcaatttttggaccatagaaagcacc 1492

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>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4,
             complete sequence
          Length = 136240

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 653   atcaattttcggaccatagaaagcacc 679
             ||||||||| |||||||||||||||||
Sbjct: 40437 atcaatttttggaccatagaaagcacc 40411

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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 666    ccatagaaagcacctnccccttcatcaatc 695
              ||||||||||| ||| ||||||||||||||
Sbjct: 129359 ccatagaaagcccctcccccttcatcaatc 129330

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>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 352   ggatacctcttgatttcagctccgaa 377
             |||||||||||||||||| |||||||
Sbjct: 94668 ggatacctcttgatttcatctccgaa 94643

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>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
             sequence, complete sequence
          Length = 138826

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 352   ggatacctcttgatttcagctccgaa 377
             |||||||||||||||||| |||||||
Sbjct: 75100 ggatacctcttgatttcatctccgaa 75125

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>gb|AC119071.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0044D15 BAC genomic
              sequence, complete sequence
          Length = 144544

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 352    ggatacctcttgatttcagctccgaa 377
              |||||||||||||||||| |||||||
Sbjct: 123031 ggatacctcttgatttcatctccgaa 123056

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>gb|AC016598.5|AC016598 Homo sapiens chromosome 5 clone CTD-2050E21, complete sequence
          Length = 159866

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 628    ttccaagagcatcctcaattttcaaa 653
              |||||||||| |||||||||||||||
Sbjct: 134317 ttccaagagcttcctcaattttcaaa 134342

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 352     ggatacctcttgatttcagctccgaa 377
               |||||||||||||||||| |||||||
Sbjct: 6792183 ggatacctcttgatttcatctccgaa 6792208



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 352     ggatacctcttgatttcagctccgaa 377
               |||||||||||||||||| |||||||
Sbjct: 6615890 ggatacctcttgatttcatctccgaa 6615915

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 352     ggatacctcttgatttcagctccgaa 377
               |||||||||||||||||| |||||||
Sbjct: 6858650 ggatacctcttgatttcatctccgaa 6858675



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 352     ggatacctcttgatttcagctccgaa 377
               |||||||||||||||||| |||||||
Sbjct: 6682357 ggatacctcttgatttcatctccgaa 6682382

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>ref|XM_864216.1| PREDICTED: Bos taurus similar to threonyl-tRNA synthetase-like 2,
            transcript variant 2 (LOC525350), mRNA
          Length = 2717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 630  ccaagagcatcctcaattttcaaatcaattttcggaccata 670
            |||||||||||||  ||||  ||||||||||| ||||||||
Sbjct: 1856 ccaagagcatccttgatttctaaatcaattttaggaccata 1816

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>ref|XM_872438.1| PREDICTED: Bos taurus similar to threonyl-tRNA synthetase-like 2,
            transcript variant 3 (LOC525350), mRNA
          Length = 2465

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 630  ccaagagcatcctcaattttcaaatcaattttcggaccata 670
            |||||||||||||  ||||  ||||||||||| ||||||||
Sbjct: 1604 ccaagagcatccttgatttctaaatcaattttaggaccata 1564

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>ref|XM_603703.2| PREDICTED: Bos taurus similar to threonyl-tRNA synthetase-like 2,
            transcript variant 1 (LOC525350), mRNA
          Length = 2750

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 630  ccaagagcatcctcaattttcaaatcaattttcggaccata 670
            |||||||||||||  ||||  ||||||||||| ||||||||
Sbjct: 1889 ccaagagcatccttgatttctaaatcaattttaggaccata 1849

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>ref|XM_711446.1| Candida albicans SC5314 hypothetical protein (CaO19_1231), mRNA
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 637 catcctcaattttcaaatcaa 657
           |||||||||||||||||||||
Sbjct: 52  catcctcaattttcaaatcaa 72

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>ref|XM_711391.1| Candida albicans SC5314 hypothetical protein (CaO19_8816), mRNA
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 637 catcctcaattttcaaatcaa 657
           |||||||||||||||||||||
Sbjct: 52  catcctcaattttcaaatcaa 72

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>gb|AC007030.3| Homo sapiens PAC clone RP5-1112I4 from 7, complete sequence
          Length = 117853

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    cggcggtgtatgtgcagcaga 90
             |||||||||||||||||||||
Sbjct: 47796 cggcggtgtatgtgcagcaga 47776

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>emb|CR759843.7| Zebrafish DNA sequence from clone DKEYP-82B4 in linkage group 22,
            complete sequence
          Length = 190165

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 642  tcaattttcaaatcaattttc 662
            |||||||||||||||||||||
Sbjct: 6961 tcaattttcaaatcaattttc 6981

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>emb|AL445201.14| Human DNA sequence from clone RP11-358L16 on chromosome 10 Contains a
             AFR GTPase-activating protein (MRIP2) pseudogene, a novel
             gene, gene LOC93550, the 3' end of a KIAA0592 pseudogene
             and three CpG islands, complete sequence
          Length = 179193

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 594   aagtcaacctgcacagtggaa 614
             |||||||||||||||||||||
Sbjct: 21686 aagtcaacctgcacagtggaa 21666

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>emb|CR749167.8| Zebrafish DNA sequence from clone DKEY-23A17 in linkage group 5,
             complete sequence
          Length = 155288

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 642   tcaattttcaaatcaattttc 662
             |||||||||||||||||||||
Sbjct: 31439 tcaattttcaaatcaattttc 31459

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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     tgcctggacctgatggtgagc 242
               |||||||||||||||||||||
Sbjct: 2300695 tgcctggacctgatggtgagc 2300675

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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 654     tcaattttcggaccatagaa 673
               ||||||||||||||||||||
Sbjct: 1642160 tcaattttcggaccatagaa 1642179

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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 554     cgagtcaacataagtgatgtcaaa 577
               |||||||||||| |||||||||||
Sbjct: 1391329 cgagtcaacatatgtgatgtcaaa 1391306

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>gb|AC105378.10| Trypanosoma brucei chromosome 7 clone RPCI93-27E10, complete sequence
          Length = 138995

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 554   cgagtcaacataagtgatgtcaaa 577
             |||||||||||| |||||||||||
Sbjct: 93514 cgagtcaacatatgtgatgtcaaa 93491

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>ref|XM_416398.1| PREDICTED: Gallus gallus similar to Ubl carboxyl-terminal hydrolase
            18 (Ubl thiolesterase 18) (ISG15-specific processing
            protease) (43 kDa ISG15-specific protease) (hUBP43)
            (LOC418167), mRNA
          Length = 2738

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 641  ctcaattttcaaatcaattt 660
            ||||||||||||||||||||
Sbjct: 2560 ctcaattttcaaatcaattt 2579

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>gb|AE006095.1| Pasteurella multocida subsp. multocida str. Pm70 section 62 of 204 of
            the complete genome
          Length = 11249

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 654  tcaattttcggaccatagaa 673
            ||||||||||||||||||||
Sbjct: 6264 tcaattttcggaccatagaa 6245

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>ref|XM_715011.1| Candida albicans SC5314 RNA polymerase III initiation factor TFIIIC
            (CaO19_7906), mRNA
          Length = 3180

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 173  gattntgctgatgaaattgtcga 195
            |||| ||||||||||||||||||
Sbjct: 2314 gattatgctgatgaaattgtcga 2336

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>ref|XM_714879.1| Candida albicans SC5314 RNA polymerase III initiation factor TFIIIC
            (CaO19_274), mRNA
          Length = 3174

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 173  gattntgctgatgaaattgtcga 195
            |||| ||||||||||||||||||
Sbjct: 2308 gattatgctgatgaaattgtcga 2330

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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    aagttttaacagaccggggt 137
              ||||||||||||||||||||
Sbjct: 619197 aagttttaacagaccggggt 619178

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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    aagttttaacagaccggggt 137
              ||||||||||||||||||||
Sbjct: 595900 aagttttaacagaccggggt 595881

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>ref|XM_820582.1| Trypanosoma brucei TREU927 clone RPCI93-27E10 hypothetical protein
            (Tb927.7.5250) partial mRNA
          Length = 2193

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 554  cgagtcaacataagtgatgtcaaa 577
            |||||||||||| |||||||||||
Sbjct: 1790 cgagtcaacatatgtgatgtcaaa 1767

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>gb|AC116651.6| Homo sapiens BAC clone RP11-799M12 from 4, complete sequence
          Length = 61067

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   ggaacattgccattttcttc 630
             ||||||||||||||||||||
Sbjct: 42544 ggaacattgccattttcttc 42563

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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 435105 cctgcaaagtggaacattgccatt 435128

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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 375414 cctgcaaagtggaacattgccatt 375437

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>gb|AY242077.1| Cucurbit yellow stunting disorder virus isolate AlLM segment RNA1,
            complete sequence
          Length = 9123

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 642  tcaattttcaaatcaatttt 661
            ||||||||||||||||||||
Sbjct: 1089 tcaattttcaaatcaatttt 1070

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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 344681 cctgcaaagtggaacattgccatt 344704

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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 605    cacagtggaacattgccattttct 628
              |||||||||||||| |||||||||
Sbjct: 711099 cacagtggaacattaccattttct 711076

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>gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, complete sequence
          Length = 155839

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 613   aacattgccattttcttcca 632
             ||||||||||||||||||||
Sbjct: 67822 aacattgccattttcttcca 67803

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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 344681 cctgcaaagtggaacattgccatt 344704

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>ref|NM_012161.2| Homo sapiens F-box and leucine-rich repeat protein 5 (FBXL5),
            transcript variant 1, mRNA
          Length = 3371

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  ggaacattgccattttcttc 630
            ||||||||||||||||||||
Sbjct: 3209 ggaacattgccattttcttc 3190

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>ref|NM_033535.2| Homo sapiens F-box and leucine-rich repeat protein 5 (FBXL5),
            transcript variant 2, mRNA
          Length = 3475

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  ggaacattgccattttcttc 630
            ||||||||||||||||||||
Sbjct: 3313 ggaacattgccattttcttc 3294

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>gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, complete sequence
          Length = 182598

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 aagtggaaaatcaccagcat 468
           ||||||||||||||||||||
Sbjct: 942 aagtggaaaatcaccagcat 923

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>gb|AC103873.2| Homo sapiens chromosome 11, clone RP11-768H8, complete sequence
          Length = 184860

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   aagtggaaaatcaccagcat 468
             ||||||||||||||||||||
Sbjct: 38696 aagtggaaaatcaccagcat 38715

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>emb|CR389337.1| Gallus gallus finished cDNA, clone ChEST724l4
          Length = 1683

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 641  ctcaattttcaaatcaattt 660
            ||||||||||||||||||||
Sbjct: 1505 ctcaattttcaaatcaattt 1524

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>dbj|AK031322.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030407E07
            product:transducin-like enhancer of split 3, homolog of
            Drosophila E(spl), full insert sequence
          Length = 3898

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 230  cctgatggtgagcgtcctggcctc 253
            ||||||||||||||| ||||||||
Sbjct: 1556 cctgatggtgagcgtgctggcctc 1533

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>emb|CR354286.1| Gallus gallus finished cDNA, clone ChEST302b16
          Length = 2581

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 641  ctcaattttcaaatcaattt 660
            ||||||||||||||||||||
Sbjct: 2403 ctcaattttcaaatcaattt 2422

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>gb|AF157323.1|AF157323 Homo sapiens p45SKP2-like protein mRNA, complete cds
          Length = 3254

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  ggaacattgccattttcttc 630
            ||||||||||||||||||||
Sbjct: 3092 ggaacattgccattttcttc 3073

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>emb|AJ537493.1|CME537493 Cucurbit yellow stunting disorder virus p227 gene, p5 gene, p59 gene,
            ORF25 and ORF22, genomic RNA 1
          Length = 9126

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 642  tcaattttcaaatcaatttt 661
            ||||||||||||||||||||
Sbjct: 1092 tcaattttcaaatcaatttt 1073

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>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete
             sequence
          Length = 227133

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 643   caattttcaaatcaattttc 662
             ||||||||||||||||||||
Sbjct: 65260 caattttcaaatcaattttc 65279

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>gb|AF140575.1|AF140575 Mycoplasma hyopneumoniae enzyme I (PTSI) and NH(3)-dependent NAD+
            synthetase genes, complete cds; and unknown gene
          Length = 4673

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  aagttttaacagaccggggt 137
            ||||||||||||||||||||
Sbjct: 2139 aagttttaacagaccggggt 2120

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>gb|AY103693.1| Zea mays PCO073595 mRNA sequence
          Length = 2491

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 37/43 (86%)
 Strand = Plus / Minus

                                                       
Query: 653  atcaattttcggaccatagaaagcacctnccccttcatcaatc 695
            ||||||||| || || |||||||||||  ||||||||| ||||
Sbjct: 1774 atcaatttttgggccgtagaaagcaccatccccttcattaatc 1732

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>gb|U73857.1|ECU73857 Escherichia coli chromosome minutes 6-8
          Length = 128824

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 601   cctgcacagtggaacattgccatt 624
             |||||| |||||||||||||||||
Sbjct: 53254 cctgcaaagtggaacattgccatt 53277

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>gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, complete sequence
          Length = 239588

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   caagccaaagtggaaaatca 461
             ||||||||||||||||||||
Sbjct: 94487 caagccaaagtggaaaatca 94468

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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    aagttttaacagaccggggt 137
              ||||||||||||||||||||
Sbjct: 584140 aagttttaacagaccggggt 584121

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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                  
Query: 654     tcaattttcggaccatagaaagcacctnccccttc 688
               |||||||| ||||||||||| |||||| | |||||
Sbjct: 1455888 tcaatttttggaccatagaatgcaccttcaccttc 1455854

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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 402158 cctgcaaagtggaacattgccatt 402181

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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 402156 cctgcaaagtggaacattgccatt 402179

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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 601    cctgcacagtggaacattgccatt 624
              |||||| |||||||||||||||||
Sbjct: 333070 cctgcaaagtggaacattgccatt 333047


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,292,785
Number of Sequences: 3902068
Number of extensions: 5292785
Number of successful extensions: 84229
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83735
Number of HSP's gapped (non-prelim): 490
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

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