ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
2gb|BT017908.1| Zea mays clone EL01N0517B09.c mRNA sequence 385 e-103
3gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
4emb|CR932958.2| Medicago truncatula chromosome 5 clone mth2-174i... 82 3e-12
5emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o1... 82 3e-12
6ref|NM_126484.3| Arabidopsis thaliana CPZ AT2G04530 (CPZ) mRNA, ... 66 2e-07
7gb|AY099564.1| Arabidopsis thaliana unknown protein (At2g04530) ... 66 2e-07
8emb|BX818969.1|CNS0A8W7 Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
9gb|BT001247.1| Arabidopsis thaliana unknown protein (At2g04530) ... 66 2e-07
10gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map ... 58 4e-05
11emb|BX819385.1|CNS0A8WT Arabidopsis thaliana Full-length cDNA Co... 50 0.010
12emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-8... 46 0.16
13emb|AL355837.6|CNS05TCR Human chromosome 14 DNA sequence BAC C-2... 46 0.16
14emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chro... 42 2.5
15gb|AC090825.5| Homo sapiens chromosome 15, clone CTD-2054N24, co... 42 2.5
16emb|BX005084.16| Mouse DNA sequence from clone RP24-468M3 on chr... 42 2.5
17emb|AL591427.2| Zebrafish DNA sequence from clone BUSM1-219H16 i... 42 2.5
18gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Can... 42 2.5
19ref|NM_127994.2| Arabidopsis thaliana catalytic AT2G24320 mRNA, ... 40 9.9
20gb|AC125170.3| Mus musculus BAC clone RP24-475C24 from chromosom... 40 9.9
21ref|XM_721008.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.9
22ref|XM_673353.1| Plasmodium berghei strain ANKA hypothetical pro... 40 9.9
23gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome... 40 9.9
24gb|DQ446562.1| Arabidopsis thaliana clone pENTR221-At2g24320 hyp... 40 9.9
25emb|Z68166.1|SPAC11D3 S.pombe chromosome I cosmid c11D3 40 9.9
26gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome... 40 9.9
27gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, comp... 40 9.9
28gb|AC108682.2| Homo sapiens Xp BAC RP11-325L9 (Roswell Park Canc... 40 9.9
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.9
30gb|AC006403.4| Arabidopsis thaliana chromosome 2 clone T28I24 ma... 40 9.9
31gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, compl... 40 9.9
32gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosom... 40 9.9
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
34dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
35emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-9... 40 9.9
36emb|AL672226.30| Mouse DNA sequence from clone RP23-413H14 on ch... 40 9.9
37emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on ch... 40 9.9
38gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, comple... 40 9.9
39emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chr... 40 9.9 
>dbj|AK070747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066C10, full
            insert sequence
          Length = 1352

 Score =  549 bits (277), Expect = e-153
 Identities = 473/537 (88%), Gaps = 1/537 (0%)
 Strand = Plus / Minus

                                                                        
Query: 186  ctacttctgtacacttagctatattcagatttgaagccttctgtcagagcaacaaccttc 245
            |||||||| |||||| | ||||| ||||||||||||||||| ||||| ||||||||||| 
Sbjct: 1171 ctacttctatacact-atctatagtcagatttgaagccttccgtcagtgcaacaaccttt 1113

                                                                        
Query: 246  gaaagtaacttcggctgtagcctggaaacagctttccggatatcctcaagactatatcga 305
            |||  |||||| | ||||||  ||||||||||||  |  |||||||||||||||||||||
Sbjct: 1112 gaagataactttgactgtagtttggaaacagcttgtctaatatcctcaagactatatcga 1053

                                                                        
Query: 306  ttcgagaaatgggtgagtataattgcctcatttctaaaccattgggaatgctccattatc 365
            || |||||||| || |||| ||| || |  ||||||||||||||||| ||||||||||||
Sbjct: 1052 tttgagaaatgtgtcagtacaatggctttgtttctaaaccattgggagtgctccattatc 993

                                                                        
Query: 366  tcagatagatgcatgtggccatgctctcgagcatgatcaacatcgacttggtcatctagg 425
            ||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 992  tcagagagatgcatgtggccatgctcccgagcatgatcaacatcaatttggtcatctagg 933

                                                                        
Query: 426  aaggttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaaga 485
            ||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 932  aaggttgcctcagttataaggacttttgctctcagggcatctgcatttcgtgggtcaaga 873

                                                                        
Query: 486  ataaaatcagatgttgtatctccggtgaaggcaacttctgggtacagtatggtatctgta 545
            |||||||||||  |||| || || || |||||||||||||| || ||||| |||||||||
Sbjct: 872  ataaaatcagactttgtgtcacctgtaaaggcaacttctggatatagtatagtatctgta 813

                                                                        
Query: 546  atctcagagcctgattgctttaattttactatttgacttcccttcaagtgagcatattgt 605
            ||||||| |||||||||||| | ||| | ||||||| | ||||||||||||||||| |||
Sbjct: 812  atctcagcgcctgattgcttcattttcattatttgattacccttcaagtgagcatactgt 753

                                                                        
Query: 606  tttttcaactttcttcgaacagagtatatgacgtagccctggctgggcacagtatggtga 665
            |||||||||||||| ||||||||||| ||||| || ||||||||||| | || |||||||
Sbjct: 752  tttttcaactttctccgaacagagtagatgacataaccctggctgggtatagcatggtga 693

                                                                     
Query: 666  gtctgaaatggtctggcaacaaggtcattgcgtatttcatatgtttctcccaaatca 722
            |||| |||||||||||||||||||||||| ||||||||| |||| || |||||||||
Sbjct: 692  gtctcaaatggtctggcaacaaggtcattacgtatttcaaatgtctcccccaaatca 636
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>gb|BT017908.1| Zea mays clone EL01N0517B09.c mRNA sequence
          Length = 1620

 Score =  385 bits (194), Expect = e-103
 Identities = 326/370 (88%)
 Strand = Plus / Minus

                                                                        
Query: 182  tgttctacttctgtacacttagctatattcagatttgaagccttctgtcagagcaacaac 241
            |||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 1501 tgttctacttatatacacttatctataatcagatttgaagccttctgttagagcaacaac 1442

                                                                        
Query: 242  cttcgaaagtaacttcggctgtagcctggaaacagctttccggatatcctcaagactata 301
            ||| |||  || ||| || ||||||||||||||||| |  || |||||||||||||||||
Sbjct: 1441 ctttgaatttagcttaggttgtagcctggaaacagcctggcgaatatcctcaagactata 1382

                                                                        
Query: 302  tcgattcgagaaatgggtgagtataattgcctcatttctaaaccattgggaatgctccat 361
            |||||| |||||||| |||||||  ||||  || || || ||||| ||| ||||||||||
Sbjct: 1381 tcgatttgagaaatgagtgagtacgattgtttcgttcctgaaccactggaaatgctccat 1322

                                                                        
Query: 362  tatctcagatagatgcatgtggccatgctctcgagcatgatcaacatcgacttggtcatc 421
            ||||||||| ||||||||||||||||| || | |||||| |||||||| || ||||||||
Sbjct: 1321 tatctcagaaagatgcatgtggccatgttccctagcatgctcaacatcaacatggtcatc 1262

                                                                        
Query: 422  taggaaggttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtc 481
            |||||| |||||||| ||||| |||||||||||||||| |||||| ||||| | ||||||
Sbjct: 1261 taggaacgttgcctcagttatgagaacctttgctctcaaggcatctgcatttcttgggtc 1202

                                                                        
Query: 482  aagaataaaatcagatgttgtatctccggtgaaggcaacttctgggtacagtatggtatc 541
            |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1201 aagaataaaatcagactttgtatctcctgtgaaggcaacttctgggtacagtatggtatc 1142

                      
Query: 542  tgtaatctca 551
             |||||||||
Sbjct: 1141 cgtaatctca 1132



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 555  cctgattgctttaattttactatttgacttcccttcaagtgagcatattgttttttcaac 614
            ||||||||||| | ||| | ||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 1116 cctgattgcttcagtttcattatttgactacccttcaaatgagcatactgttttttcaac 1057

                                   
Query: 615  tttcttcgaacagagtatatgac 637
            |||||||||| |||||| |||||
Sbjct: 1056 tttcttcgaatagagtagatgac 1034



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 643 cctggctgggcacagtatggtgagtctgaaatggtctggcaacaaggtcattgcgtattt 702
           |||||||||| | ||| ||||  || |||||||| ||||||||||| ||||| |||||||
Sbjct: 935 cctggctgggtatagtgtggtacgtttgaaatggcctggcaacaagatcattacgtattt 876

                              
Query: 703 catatgtttctcccaaatc 721
           ||||||| |||||||||||
Sbjct: 875 catatgtctctcccaaatc 857
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score =  121 bits (61), Expect = 3e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                         
Query: 433   cctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaataaaat 492
             |||| |||||||| || ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 40699 cctcagttataaggacttttgctctcagggcatctgcatttcgtgggtcaagaataaaat 40758

                                                                      
Query: 493   cagatgttgtatctccggtgaaggcaacttctgggtacagtatggtatctgtaatct 549
             ||||  |||| || || || |||||||||||||| || ||||| |||||||||||||
Sbjct: 40759 cagactttgtgtcacctgtaaaggcaacttctggatatagtatagtatctgtaatct 40815



 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                         
Query: 365   ctcagatagatgcatgtggccatgctctcgagcatgatcaacatcgacttggtcatctag 424
             |||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 39993 ctcagagagatgcatgtggccatgctcccgagcatgatcaacatcaatttggtcatctag 40052

                        
Query: 425   gaaggttgcct 435
             |||||||||||
Sbjct: 40053 gaaggttgcct 40063



 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                         
Query: 548   ctcagagcctgattgctttaattttactatttgacttcccttcaagtgagcatattgttt 607
             ||||| |||||||||||| | ||| | ||||||| | ||||||||||||||||| |||||
Sbjct: 40884 ctcagcgcctgattgcttcattttcattatttgattacccttcaagtgagcatactgttt 40943

                                                    
Query: 608   tttcaactttcttcgaacagagtatatgacgtagccctg 646
             |||||||||||| ||||||||||| ||||| || |||||
Sbjct: 40944 tttcaactttctccgaacagagtagatgacataaccctg 40982



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                         
Query: 643   cctggctgggcacagtatggtgagtctgaaatggtctggcaacaaggtcattgcgtattt 702
             |||||||||| | || ||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 41102 cctggctgggtatagcatggtgagtctcaaatggtctggcaacaaggtcattacgtattt 41161

                    
Query: 703   catatgt 709
             || ||||
Sbjct: 41162 caaatgt 41168



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 289   cctcaagactatatcgattcgagaaatgggtgagtataattgcctcatttctaaaccatt 348
             ||||||||||||||||||| |||||||| || |||| ||| || |  |||||||||||||
Sbjct: 39781 cctcaagactatatcgatttgagaaatgtgtcagtacaatggctttgtttctaaaccatt 39840

                               
Query: 349   gggaatgctccattatct 366
             |||| |||||||||||||
Sbjct: 39841 gggagtgctccattatct 39858



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 81/94 (86%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                         
Query: 186   ctacttctgtacacttagctatattcagatttgaagccttctgtcagagcaacaaccttc 245
             |||||||| |||||| | ||||| ||||||||||||||||| ||||| ||||||||||| 
Sbjct: 39579 ctacttctatacact-atctatagtcagatttgaagccttccgtcagtgcaacaaccttt 39637

                                               
Query: 246   gaaagtaacttcggctgtagcctggaaacagctt 279
             |||  |||||| | ||||||  ||||||||||||
Sbjct: 39638 gaagataactttgactgtagtttggaaacagctt 39671
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>emb|CR932958.2| Medicago truncatula chromosome 5 clone mth2-174i23, COMPLETE SEQUENCE
          Length = 122746

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 433    cctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaataaaat 492
              |||| ||||||||||| ||||||||||  ||||| |||||  |||||||||| |||||||
Sbjct: 120469 cctcggttataagaacttttgctctcaatgcatcggcattaagtgggtcaagcataaaat 120410

                                       
Query: 493    cagatgttgtatctccggtgaaggc 517
              | ||||||||||| || ||||||||
Sbjct: 120409 ctgatgttgtatccccagtgaaggc 120385



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 682    caacaaggtcattgcgtatttcatatgt 709
              ||||||||||||| ||||||||||||||
Sbjct: 119730 caacaaggtcattccgtatttcatatgt 119703
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>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                        
Query: 433  cctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaataaaat 492
            |||| ||||||||||| ||||||||||  ||||| |||||  |||||||||| |||||||
Sbjct: 1036 cctcggttataagaacttttgctctcaatgcatcggcattaagtgggtcaagcataaaat 977

                                     
Query: 493  cagatgttgtatctccggtgaaggc 517
            | ||||||||||| || ||||||||
Sbjct: 976  ctgatgttgtatccccagtgaaggc 952



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 682 caacaaggtcattgcgtatttcatatgt 709
           ||||||||||||| ||||||||||||||
Sbjct: 297 caacaaggtcattccgtatttcatatgt 270
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>ref|NM_126484.3| Arabidopsis thaliana CPZ AT2G04530 (CPZ) mRNA, complete cds
          Length = 1232

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 429 gttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaata 488
           |||||||| ||||||||||| ||||| ||||  ||||| ||||| || |||||||| |||
Sbjct: 873 gttgcctcagttataagaacttttgccctcaacgcatcagcattacgagggtcaagcata 814

                                        
Query: 489 aaatcagatgttgtatctccggtgaaggc 517
            | || || ||||||||||| ||||||||
Sbjct: 813 tactctgaagttgtatctccagtgaaggc 785
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>gb|AY099564.1| Arabidopsis thaliana unknown protein (At2g04530) mRNA, complete cds
          Length = 1195

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 429 gttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaata 488
           |||||||| ||||||||||| ||||| ||||  ||||| ||||| || |||||||| |||
Sbjct: 854 gttgcctcagttataagaacttttgccctcaacgcatcagcattacgagggtcaagcata 795

                                        
Query: 489 aaatcagatgttgtatctccggtgaaggc 517
            | || || ||||||||||| ||||||||
Sbjct: 794 tactctgaagttgtatctccagtgaaggc 766
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>emb|BX818969.1|CNS0A8W7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB32ZD01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1237

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 429 gttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaata 488
           |||||||| ||||||||||| ||||| ||||  ||||| ||||| || |||||||| |||
Sbjct: 924 gttgcctcagttataagaacttttgccctcaacgcatcagcattacgagggtcaagcata 865

                                        
Query: 489 aaatcagatgttgtatctccggtgaaggc 517
            | || || ||||||||||| ||||||||
Sbjct: 864 tactctgaagttgtatctccagtgaaggc 836



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 659 atggtgagtctgaaatggtctggcaacaaggtcattgcgtatttcatatgtttc 712
           ||||||||||  |||||||||  |||||| ||||||||| |  |||||||||||
Sbjct: 694 atggtgagtcgcaaatggtctaacaacaatgtcattgcgcaactcatatgtttc 641
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>gb|BT001247.1| Arabidopsis thaliana unknown protein (At2g04530) mRNA, complete cds
          Length = 1102

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 429 gttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaata 488
           |||||||| ||||||||||| ||||| ||||  ||||| ||||| || |||||||| |||
Sbjct: 836 gttgcctcagttataagaacttttgccctcaacgcatcagcattacgagggtcaagcata 777

                                        
Query: 489 aaatcagatgttgtatctccggtgaaggc 517
            | || || ||||||||||| ||||||||
Sbjct: 776 tactctgaagttgtatctccagtgaaggc 748
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>gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map RNS1, complete
             sequence
          Length = 99804

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 433   cctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaataaaat 492
             |||| ||||||||||| ||||| ||||  ||||| ||||| || |||||||| ||| | |
Sbjct: 24122 cctcagttataagaacttttgccctcaacgcatcagcattacgagggtcaagcatatact 24181

                                      
Query: 493   cagatgttgtatctccggtgaaggc 517
             | || ||||||||||| ||||||||
Sbjct: 24182 ctgaagttgtatctccagtgaaggc 24206
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>emb|BX819385.1|CNS0A8WT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB73ZF07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1485

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                       
Query: 429 gttgcctctgttataagaacctttgctctcagggcatccgcattccgtgggtcaagaata 488
           |||||||| ||||| ||||| ||||| ||||  ||||| ||||| || |||| ||| |||
Sbjct: 917 gttgcctcagttatgagaacttttgccctcaacgcatcagcattacgagggttaagcata 858

                                        
Query: 489 aaatcagatgttgtatctccggtgaaggc 517
            | || || ||||||||||| ||||||||
Sbjct: 857 tactctgaagttgtatctccagtgaaggc 829
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>emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-880O3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 225603

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 567   aattttactatttgacttccctt 589
             |||||||||||||||||||||||
Sbjct: 42793 aattttactatttgacttccctt 42771
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>emb|AL355837.6|CNS05TCR Human chromosome 14 DNA sequence BAC C-2216L1 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 120724

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 567   aattttactatttgacttccctt 589
             |||||||||||||||||||||||
Sbjct: 19835 aattttactatttgacttccctt 19857
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>emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chromosome 17, complete
             sequence
          Length = 205598

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 170   gaaaacaccaggtgttctact 190
             |||||||||||||||||||||
Sbjct: 39392 gaaaacaccaggtgttctact 39372
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>gb|AC090825.5| Homo sapiens chromosome 15, clone CTD-2054N24, complete sequence
          Length = 170507

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 27    gtacaaggtttattttctaagacta 51
             |||||||||||||||| ||||||||
Sbjct: 50706 gtacaaggtttattttttaagacta 50682
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>emb|BX005084.16| Mouse DNA sequence from clone RP24-468M3 on chromosome 4, complete
             sequence
          Length = 90370

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 220   agccttctgtcagagcaacaa 240
             |||||||||||||||||||||
Sbjct: 63668 agccttctgtcagagcaacaa 63648
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>emb|AL591427.2| Zebrafish DNA sequence from clone BUSM1-219H16 in linkage group 7,
             complete sequence
          Length = 126202

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 556   ctgattgctttaattttacta 576
             |||||||||||||||||||||
Sbjct: 17592 ctgattgctttaattttacta 17612
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>gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 209414

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 345    cattgggaatgctccattatctcag 369
              |||||||||| ||||||||||||||
Sbjct: 121141 cattgggaatactccattatctcag 121165
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>ref|NM_127994.2| Arabidopsis thaliana catalytic AT2G24320 mRNA, complete cds
          Length = 861

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 677 tctggcaacaaggtcattgc 696
           ||||||||||||||||||||
Sbjct: 133 tctggcaacaaggtcattgc 152
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>gb|AC125170.3| Mus musculus BAC clone RP24-475C24 from chromosome 7, complete sequence
          Length = 182678

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    ttgctttaattttactattt 579
              ||||||||||||||||||||
Sbjct: 123702 ttgctttaattttactattt 123683
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>ref|XM_721008.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00654)
            partial mRNA
          Length = 1881

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 482  aagaataaaatcagatgttg 501
            ||||||||||||||||||||
Sbjct: 1422 aagaataaaatcagatgttg 1441
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>ref|XM_673353.1| Plasmodium berghei strain ANKA hypothetical protein (PB001114.00.0)
            partial mRNA
          Length = 2238

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 482  aagaataaaatcagatgttg 501
            ||||||||||||||||||||
Sbjct: 1374 aagaataaaatcagatgttg 1393
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>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence
          Length = 190772

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   cagatagatgcatgtggcca 386
             ||||||||||||||||||||
Sbjct: 46794 cagatagatgcatgtggcca 46813
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>gb|DQ446562.1| Arabidopsis thaliana clone pENTR221-At2g24320 hypothetical protein
           (At2g24320) mRNA, complete cds
          Length = 861

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 677 tctggcaacaaggtcattgc 696
           ||||||||||||||||||||
Sbjct: 133 tctggcaacaaggtcattgc 152
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>emb|Z68166.1|SPAC11D3 S.pombe chromosome I cosmid c11D3
          Length = 39292

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ctaagactaggaacaaaaga 62
             ||||||||||||||||||||
Sbjct: 13267 ctaagactaggaacaaaaga 13286
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>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence
          Length = 209118

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    cagatagatgcatgtggcca 386
              ||||||||||||||||||||
Sbjct: 183024 cagatagatgcatgtggcca 183043
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>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 598    catattgttttttcaacttt 617
              ||||||||||||||||||||
Sbjct: 104732 catattgttttttcaacttt 104713
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>gb|AC108682.2| Homo sapiens Xp BAC RP11-325L9 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 74143

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 538 tatctgtaatctcagagcct 557
           ||||||||||||||||||||
Sbjct: 960 tatctgtaatctcagagcct 979
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     gggcatccgcattccgtggg 479
               ||||||||||||||||||||
Sbjct: 3353374 gggcatccgcattccgtggg 3353393
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>gb|AC006403.4| Arabidopsis thaliana chromosome 2 clone T28I24 map mi238, complete
             sequence
          Length = 79555

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 677   tctggcaacaaggtcattgc 696
             ||||||||||||||||||||
Sbjct: 10671 tctggcaacaaggtcattgc 10652
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>gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, complete sequence
          Length = 109306

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   cctctgttataagaacctttgctc 456
             ||||||||||||||| ||||||||
Sbjct: 76558 cctctgttataagaatctttgctc 76535
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>gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosome 13, complete sequence
          Length = 197815

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    tgaagccttctgtcagagcaacaa 240
              ||||||||||||||||| ||||||
Sbjct: 101166 tgaagccttctgtcagaacaacaa 101189
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 198     acttagctatattcagattt 217
               ||||||||||||||||||||
Sbjct: 3528105 acttagctatattcagattt 3528124
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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0675A05
          Length = 131972

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   acttagctatattcagattt 217
             ||||||||||||||||||||
Sbjct: 19942 acttagctatattcagattt 19961
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>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167642

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ctgattgctttaattttact 575
             ||||||||||||||||||||
Sbjct: 62460 ctgattgctttaattttact 62441
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>emb|AL672226.30| Mouse DNA sequence from clone RP23-413H14 on chromosome X, complete
             sequence
          Length = 114117

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gctatattcagatttgaagc 222
             ||||||||||||||||||||
Sbjct: 71000 gctatattcagatttgaagc 71019
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>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete
             sequence
          Length = 163240

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 559   attgctttaattttactatttgac 582
             |||||||||||||| |||||||||
Sbjct: 16589 attgctttaattttcctatttgac 16566
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>gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, complete sequence
          Length = 224972

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     taaaacagtcatatctataa 107
              ||||||||||||||||||||
Sbjct: 141703 taaaacagtcatatctataa 141722
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>emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chromosome 4, complete
             sequence
          Length = 236166

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ttgctttaattttactattt 579
             ||||||||||||||||||||
Sbjct: 83304 ttgctttaattttactattt 83323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,051,412
Number of Sequences: 3902068
Number of extensions: 7051412
Number of successful extensions: 163678
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163522
Number of HSP's gapped (non-prelim): 156
length of query: 722
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 699
effective length of database: 17,143,297,704
effective search space: 11983165095096
effective search space used: 11983165095096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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