| Clone Name | rbags10k08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dep... | 30 | 8.2 |
|---|
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 29.6 bits (65), Expect = 8.2 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +1 Query: 439 TEYSMLWLAPQIV*CVQAHKEHTQCCLSNKSMHSCNML*ESPLDMCCN 582 T + ++ P I C+Q + H +C L +H N+L P ++ C+ Sbjct: 770 THCAHVFCKPCICQCIQNEQPHAKCPLCRNDIHGDNLLECPPEELACD 817 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,431,238 Number of Sequences: 219361 Number of extensions: 2413784 Number of successful extensions: 6099 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 5587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6050 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)