| Clone Name | rbags10j22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM039895.1| Hordeum vulgare mRNA for putative AdoMet synthase 3 (sam3 gene) Length = 1447 Score = 285 bits (144), Expect = 2e-74 Identities = 148/150 (98%) Strand = Plus / Minus Query: 1 gaatgctgntcttacttcccaggagcaaaagaaccccgccttgccgaacttgagaggcat 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 gaatgctgttcttacttcccaggagcaaaagaaccccgccttgccgaacttgagaggcat 1304 Query: 61 ntgaccaagaaaaccccgagtgtgatgtcttgttcttaggcagatgccttgtcgaacttg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 ctgaccaagaaaaccccgagtgtgatgtcttgttcttaggcagatgccttgtcgaacttg 1244 Query: 121 aggggcttcaccacctcccaggtgaagtca 150 |||||||||||||||||||||||||||||| Sbjct: 1243 aggggcttcaccacctcccaggtgaagtca 1214
>emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 Score = 196 bits (99), Expect = 1e-47 Identities = 132/142 (92%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 10 tcttacttcccaggagcaaaagaaccccgccttgccgaacttgagaggcatntgaccaag 69 |||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 1353 tcttacttccgaggagcaaaaggatcccgccttgccgaacttgagaggcatcagaccaag 1294 Query: 70 aa-aaccccgagtgtgatgtcttgttcttaggcagatgccttgtcgaacttgaggggctt 128 || ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1293 aagaaccctcaatgtgatgtcttgttcttaagcagatgccttgtcgaacttgaggggctt 1234 Query: 129 caccacctcccaggtgaagtca 150 |||||||||||||||||||||| Sbjct: 1233 caccacctcccaggtgaagtca 1212
>dbj|D63835.1|BLYSAS Barley mRNA for S-adenosylmethionine synthetase, complete cds Length = 1353 Score = 188 bits (95), Expect = 3e-45 Identities = 131/142 (92%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 10 tcttacttcccaggagcaaaagaaccccgccttgccgaacttgagaggcatntgaccaag 69 |||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 1326 tcttacttccgaggagcaaaaggatcccgccttgccgaacttgagaggcatcagaccaag 1267 Query: 70 aa-aaccccgagtgtgatgtcttgttcttaggcagatgccttgtcgaacttgaggggctt 128 || ||||| | ||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1266 aagaaccctcaatgtgatgtcttcttcttaagcagatgccttgtcgaacttgaggggctt 1207 Query: 129 caccacctcccaggtgaagtca 150 |||||||||||||||||||||| Sbjct: 1206 caccacctcccaggtgaagtca 1185
>emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Minus Query: 81 tgtgatgtcttgttcttaggcagatgccttgtcgaacttgaggggcttcaccacctccca 140 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1277 tgtgatgtcttcttcttaggcagatgccttgtcgaacttgaggggcttcaccacctccca 1218 Query: 141 ggtgaagtc 149 ||||||||| Sbjct: 1217 ggtgaagtc 1209
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 124127 acttgaggggcttcaccacctcccaggtgaagtc 124094
>emb|Z26867.1|OSSAMS1 O.sativa (pRSAM-1) gene for S-adenosyl methionine synthetase Length = 2183 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 1958 acttgaggggcttcaccacctcccaggtgaagtc 1925
>emb|AJ296743.1|OSA296743 Oryza sativa mRNA for S-adenosylmethionine synthetase (SAMS gene) Length = 1594 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 1278 acttgaggggcttcaccacctcccaggtgaagtc 1245
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 2031250 acttgaggggcttcaccacctcccaggtgaagtc 2031217
>dbj|AK104875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D12, full insert sequence Length = 1487 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 1186 acttgaggggcttcaccacctcccaggtgaagtc 1153
>dbj|AK103157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A17, full insert sequence Length = 1586 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacctcccaggtgaagtc 1256
>dbj|AK072051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H09, full insert sequence Length = 1555 Score = 67.9 bits (34), Expect = 8e-09 Identities = 34/34 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacctcccaggtgaagtc 1256
>gb|BT016479.1| Zea mays clone Contig312 mRNA sequence Length = 1352 Score = 65.9 bits (33), Expect = 3e-08 Identities = 33/33 (100%) Strand = Plus / Minus Query: 117 cttgaggggcttcaccacctcccaggtgaagtc 149 ||||||||||||||||||||||||||||||||| Sbjct: 1001 cttgaggggcttcaccacctcccaggtgaagtc 969
>gb|AY039010.1| Elaeis oleifera S-adenosyl methionine synthetase (SAMS1) mRNA, partial cds Length = 545 Score = 65.9 bits (33), Expect = 3e-08 Identities = 33/33 (100%) Strand = Plus / Minus Query: 117 cttgaggggcttcaccacctcccaggtgaagtc 149 ||||||||||||||||||||||||||||||||| Sbjct: 224 cttgaggggcttcaccacctcccaggtgaagtc 192
>ref|NM_183624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 61.9 bits (31), Expect = 5e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 |||||||||| |||||||||||||||||||||||| Sbjct: 1171 acttgaggggtttcaccacctcccaggtgaagtca 1137
>gb|BT018468.1| Zea mays clone EL01N0419H05.d mRNA sequence Length = 1498 Score = 61.9 bits (31), Expect = 5e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||||||||||||||||||||||||| Sbjct: 1236 acttgagtggcttcaccacctcccaggtgaagtca 1202
>gb|AF420238.1|AF420238 Dendrobium crumenatum S-adenosyl-L-methionine synthetase (Sams) mRNA, complete cds Length = 1566 Score = 61.9 bits (31), Expect = 5e-07 Identities = 31/31 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||||||||||||||||||||||||||| Sbjct: 1241 acttgaggggcttcaccacctcccaggtgaa 1211
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 5e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 |||||||||| |||||||||||||||||||||||| Sbjct: 10655887 acttgaggggtttcaccacctcccaggtgaagtca 10655921
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 61.9 bits (31), Expect = 5e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 |||||||||| |||||||||||||||||||||||| Sbjct: 150510 acttgaggggtttcaccacctcccaggtgaagtca 150544
>gb|M73430.1|POPSAMPDPT Populus x generosa tissue-type leaf S-adenosyl methionine synthetase mRNA, complete cds Length = 1437 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 ||||||||||||||||||||||||| |||||||| Sbjct: 1224 acttgaggggcttcaccacctcccatgtgaagtc 1191
>gb|AY583461.1| Daucus carota S-adenosyl-L-methionine synthetase 1 (SAMS1) mRNA, complete cds Length = 1497 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 ||||||||||||||||||||||||| |||||||| Sbjct: 1322 acttgaggggcttcaccacctcccaagtgaagtc 1289
>emb|AM039896.1| Hordeum vulgare mRNA for putative AdoMet synthase 4 (sam4 gene) Length = 1546 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||| ||||||||||||||||| Sbjct: 1245 acttgaggggcttcacaacctcccaggtgaagtc 1212
>gb|U79767.1|MCU79767 Mesembryanthemum crystallinum methionine adenosyltransferase mRNA, complete cds Length = 1628 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 118 ttgaggggcttcaccacctcccaggtgaagtc 149 ||||||||||||||||||||||| |||||||| Sbjct: 1225 ttgaggggcttcaccacctcccatgtgaagtc 1194
>ref|NM_116415.2| Arabidopsis thaliana ATP binding / methionine adenosyltransferase AT4G01850 mRNA, complete cds Length = 1479 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1258 acttgagtggcttcacgacctcccaggtgaagtca 1224
>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete sequence Length = 120185 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 39834 acttgagtggcttcacgacctcccaggtgaagtca 39868
>gb|BT000575.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850/T7B11_11) mRNA, complete cds Length = 1182 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1162 acttgagtggcttcacgacctcccaggtgaagtca 1128
>emb|X80362.1|BJMSAMS B.juncea msams mRNA Length = 1474 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1261 acttgagtggcttcacgacctcccaggtgaagtca 1227
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 25187 acttgagtggcttcacgacctcccaggtgaagtca 25221
>gb|AY094454.1| Arabidopsis thaliana AT4g01850/T7B11_11 mRNA, complete cds Length = 1387 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1253 acttgagtggcttcacgacctcccaggtgaagtca 1219
>gb|AY072327.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850; T7B11.11) mRNA, complete cds Length = 1438 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1253 acttgagtggcttcacgacctcccaggtgaagtca 1219
>gb|AF379015.1|AF379015 Brassica juncea clone MSAMS5 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1429 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1258 acttgagtggcttcacgacctcccaggtgaagtca 1224
>gb|AY089126.1| Arabidopsis thaliana clone 36518 mRNA, complete sequence Length = 1395 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1256 acttgagtggcttcacgacctcccaggtgaagtca 1222
>gb|AF271220.1| Brassica juncea S-adenosylmethionine synthetase gene, complete cds Length = 4459 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 3436 acttgagtggcttcacaacctcccaggtgaagtca 3402
>gb|AF379013.1| Brassica juncea clone MSAMS3 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1459 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1270 acttgagtggcttcacgacctcccaggtgaagtca 1236
>gb|AY567973.1| Brassica rapa subsp. pekinensis cultivar Seoul S-adenosyl-L-methionine synthetase (SAMS) mRNA, complete cds Length = 1182 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1162 acttgagtggcttcacgacctcccaggtgaagtca 1128
>gb|M33217.1|ATHSAM2 A.thaliana S-adenosylmethionine synthetase 2 (sam-2) gene, complete cds Length = 2401 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| |||||||||||||||||| Sbjct: 1908 acttgagtggcttcacgacctcccaggtgaagtca 1874
>dbj|AB221009.1| Beta vulgaris BvSAMS1 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1720 Score = 52.0 bits (26), Expect = 5e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||| |||||||| |||||||| Sbjct: 1299 acttgaggggcttcacaacctcccatgtgaagtc 1266
>gb|U17241.1|ACU17241 Actinidia chinensis S-adenosylmethionine synthetase mRNA, partial cds Length = 1272 Score = 52.0 bits (26), Expect = 5e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 121 aggggcttcaccacctcccaggtgaagtca 150 |||||||||||||||||||| ||||||||| Sbjct: 1059 aggggcttcaccacctcccatgtgaagtca 1030
>gb|AY109333.1| Zea mays CL2757_5 mRNA sequence Length = 1912 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 121 aggggcttcaccacctcccaggtgaagtc 149 |||||||| |||||||||||||||||||| Sbjct: 455 aggggcttgaccacctcccaggtgaagtc 483
>gb|AY259227.1| Litchi chinensis S-adenosylmethionine synthetase (SAMS) mRNA, complete cds Length = 1515 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Minus Query: 107 ccttgtcgaacttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||||| ||||| ||||||||||| ||||||||| Sbjct: 1240 ccttgtcccacttgagtggcttgaccacctcccatgtgaagtca 1197
>gb|DQ455588.1| Phaseolus vulgaris S-adenosyl-L-methionine synthetase mRNA, partial cds Length = 480 Score = 46.1 bits (23), Expect = 0.030 Identities = 32/35 (91%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||||||||| ||||| ||||||||| Sbjct: 463 acttgagtggcttcaccacttcccatgtgaagtca 429
>gb|AY325308.1| Brassica oleracea var. capitata putative S-adenosylmethionine synthetase mRNA, partial cds Length = 1311 Score = 46.1 bits (23), Expect = 0.030 Identities = 32/35 (91%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| |||||||| ||||||||||||||||| Sbjct: 1081 acttgagtggcttcacgccctcccaggtgaagtca 1047
>gb|AY583462.1| Daucus carota S-adenosyl-L-methionine synthetase 2 (SAMS2) mRNA, complete cds Length = 1207 Score = 46.1 bits (23), Expect = 0.030 Identities = 29/31 (93%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||||||||| || |||||||||||||| Sbjct: 1167 acttgaggggcttgactacctcccaggtgaa 1137
>gb|AF004317.1|AF004317 Musa acuminata S-adenosyl-L-methionine synthetase homolog mRNA, complete cds Length = 1547 Score = 46.1 bits (23), Expect = 0.030 Identities = 32/35 (91%) Strand = Plus / Minus Query: 115 aacttgaggggcttcaccacctcccaggtgaagtc 149 |||| ||||||||| || ||||||||||||||||| Sbjct: 1268 aactcgaggggcttgactacctcccaggtgaagtc 1234
>gb|AF346305.1|AF346305 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS1) mRNA, complete cds Length = 1572 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||||| | |||||| |||||||| Sbjct: 1244 acttgaggggcttcacaatctcccatgtgaagtc 1211
>dbj|AB221010.1| Beta vulgaris BvSAMS2 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1570 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 |||| |||||||| || ||||||||||||||||| Sbjct: 1224 acttcaggggcttgacgacctcccaggtgaagtc 1191
>dbj|AP004964.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20J05, TM0143a, complete sequence Length = 7894 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtc 149 ||||||| |||||||| || |||||||||||||| Sbjct: 1447 acttgagtggcttcacaacttcccaggtgaagtc 1414
>gb|AY236337.1| Salvia miltiorrhiza S-adenosylmethionine synthetase mRNA, partial cds Length = 567 Score = 42.1 bits (21), Expect = 0.47 Identities = 30/33 (90%) Strand = Plus / Minus Query: 118 ttgaggggcttcaccacctcccaggtgaagtca 150 ||||||||||| || |||||||| ||||||||| Sbjct: 545 ttgaggggcttgacaacctcccaagtgaagtca 513
>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence Length = 164098 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccaggagcaaaagaac 34 |||||||||||||||||||| Sbjct: 151460 cttcccaggagcaaaagaac 151441
>gb|U71201.2|MMU71201 Mus musculus JAK3 (Jak3) gene, 5' UTR and complete cds Length = 15829 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccaggagcaaaagaac 34 |||||||||||||||||||| Sbjct: 4168 cttcccaggagcaaaagaac 4187
>emb|AJ277206.1|CSI277206 Camellia sinensis gene for s-adenosylmethinonine synthetase Length = 1776 Score = 40.1 bits (20), Expect = 1.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac-ctcccaggtgaagtca 150 ||||||||||||||||||| ||||| ||||||||| Sbjct: 1275 acttgaggggcttcaccactttcccatgtgaagtca 1240
>gb|AF346306.1|AF346306 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS2) mRNA, complete cds Length = 1627 Score = 40.1 bits (20), Expect = 1.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 118 ttgaggggcttcaccacctcccaggtgaagtc 149 |||||||||||||| | |||||| |||||||| Sbjct: 1269 ttgaggggcttcacaatctcccatgtgaagtc 1238
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccaggagcaaaagaac 34 |||||||||||||||||||| Sbjct: 132499 cttcccaggagcaaaagaac 132518
>dbj|AB041534.1| Camellia sinensis SAM mRNA for s-adenosylmethionine synthetase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 1.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac-ctcccaggtgaagtca 150 ||||||||||||||||||| ||||| ||||||||| Sbjct: 1170 acttgaggggcttcaccactttcccatgtgaagtca 1135
>ref|NM_112617.2| Arabidopsis thaliana unknown protein AT3G17380 mRNA, complete cds Length = 2539 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1350 acttgagtggcttgactacctcccaggtgaa 1380
>ref|NM_179246.1| Arabidopsis thaliana SAM1; methionine adenosyltransferase AT1G02500 (SAM1) transcript variant AT1G02500.2 mRNA, complete cds Length = 1530 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1291 acttgagtggcttgacgacttcccaggtgaagtca 1257
>ref|NM_100131.2| Arabidopsis thaliana SAM1; methionine adenosyltransferase AT1G02500 (SAM1) transcript variant AT1G02500.1 mRNA, complete cds Length = 1530 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1291 acttgagtggcttgacgacttcccaggtgaagtca 1257
>ref|NM_112618.2| Arabidopsis thaliana MTO3; methionine adenosyltransferase AT3G17390 (MTO3) mRNA, complete cds Length = 1688 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1371 acttgagtggcttgactacctcccaggtgaa 1341
>gb|AY548884.1| Antonospora locustae chromosome segregation protein gene, partial cds; and hypothetical protein, DNA repair helicase RAD25, beta transducin repeat containing protein-like protein, and phospholipase D genes, complete cds Length = 12326 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 atgtcttgttcttaggcag 103 ||||||||||||||||||| Sbjct: 3237 atgtcttgttcttaggcag 3219
>gb|AY560003.1| Medicago sativa S-adenosylmethionine synthase mRNA, complete cds Length = 1173 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 124 ggcttcaccacctcccaggtgaagtca 150 ||||||||||| ||||| ||||||||| Sbjct: 1154 ggcttcaccacttcccatgtgaagtca 1128
>ref|NM_001033839.1| Ciona intestinalis complement factor B-2 (bf-2), mRNA Length = 2997 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 599 acttgaggggcttcaccac 581
>ref|NM_001032801.1| Ciona intestinalis complement factor B-1 (Bf-1), mRNA Length = 3614 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 602 acttgaggggcttcaccac 584
>ref|NM_001032802.1| Ciona intestinalis complement factor B-3 (Bf-3), mRNA Length = 3041 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 581 acttgaggggcttcaccac 563
>emb|X53323.1|ATSAMIGEN A.thaliana DNA for S-adenosylmethionine synthetase gene sam-1 Length = 2559 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1910 acttgagtggcttgacgacttcccaggtgaagtca 1876
>gb|AC009296.2| Homo sapiens PAC clone RP5-1157F16 from 7, complete sequence Length = 33223 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 ccttgtcgaacttgaggggcttc 129 ||||||||| ||||||||||||| Sbjct: 11759 ccttgtcgagcttgaggggcttc 11737
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 ccttgtcgaacttgaggggcttc 129 ||||||||| ||||||||||||| Sbjct: 74867 ccttgtcgagcttgaggggcttc 74845
>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete sequence Length = 44495 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 gatgtcttgttcttaggca 102 ||||||||||||||||||| Sbjct: 27407 gatgtcttgttcttaggca 27425
>gb|BT000712.1| Arabidopsis thaliana clone RAFL09-90-M19 (R19828) putative s-adenosylmethionine synthetase (At3g17390) mRNA, complete cds Length = 1465 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1246 acttgagtggcttgactacctcccaggtgaa 1216
>emb|X82076.1|PSSAMS1 P.sativum mRNA for SAMS-1 Length = 1446 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 124 ggcttcaccacctcccaggtgaagtca 150 ||||||||||| ||||| ||||||||| Sbjct: 1079 ggcttcaccacttcccatgtgaagtca 1053
>gb|AF531479.1| Carica papaya S-adenosylmethionine synthase (SAMS) mRNA, complete cds Length = 1886 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 123 gggcttcaccacctcccaggtgaagtc 149 ||||||||| || |||||||||||||| Sbjct: 1588 gggcttcacgacttcccaggtgaagtc 1562
>gb|AY120708.1| Arabidopsis thaliana putative S-adenosylmethionine synthetase (At3g17390) mRNA, complete cds Length = 1473 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1246 acttgagtggcttgactacctcccaggtgaa 1216
>gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequence Length = 121626 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 124 ggcttcaccacctcccaggtgaagtca 150 ||||||||||| ||||| ||||||||| Sbjct: 107985 ggcttcaccacttcccatgtgaagtca 108011
>gb|AC103727.2| Homo sapiens chromosome 18, clone RP11-189C5, complete sequence Length = 149383 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tacttcccaggagcaaaag 31 ||||||||||||||||||| Sbjct: 81204 tacttcccaggagcaaaag 81186
>gb|AY092955.1| Arabidopsis thaliana S-adenosylmethionine synthetase (At1g02500) mRNA, complete cds Length = 1486 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1288 acttgagtggcttgacgacttcccaggtgaagtca 1254
>gb|AY061895.1| Arabidopsis thaliana At1g02500/T14P4_22 mRNA, complete cds Length = 1107 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1087 acttgagtggcttgacgacttcccaggtgaagtca 1053
>gb|AF428440.1|AF428440 Arabidopsis thaliana At1g02500/T14P4_22 mRNA, complete cds Length = 1440 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1288 acttgagtggcttgacgacttcccaggtgaagtca 1254
>gb|AY052311.1| Arabidopsis thaliana At1g02500/T14P4_22 mRNA, complete cds Length = 1459 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1289 acttgagtggcttgacgacttcccaggtgaagtca 1255
>gb|AC025918.7| Homo sapiens chromosome 15 clone RP11-313H3 map 15q21.3, complete sequence Length = 187734 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 64 accaagaaaaccccgagtgtgatgtct 90 ||||||||||||| |||||||||||| Sbjct: 161215 accaagaaaaccctaagtgtgatgtct 161241
>gb|AY037214.1| Arabidopsis thaliana AT3g17390/MGD8_20 mRNA, complete cds Length = 1510 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1248 acttgagtggcttgactacctcccaggtgaa 1218
>gb|AF325061.2|AF325061 Arabidopsis thaliana At1g02500 (At1g02500/T14P4_22) mRNA, complete cds Length = 1508 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1283 acttgagtggcttgacgacttcccaggtgaagtca 1249
>emb|BX823645.1|CNS0A7V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1231 acttgagtggcttgactacctcccaggtgaa 1201
>gb|AY826834.1| Isochrysis galbana clone ISAP1 ascorbate peroxidase mRNA, partial cds Length = 1123 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 ttgtcgaacttgaggggct 127 ||||||||||||||||||| Sbjct: 566 ttgtcgaacttgaggggct 548
>dbj|AB180046.1| Ciona intestinalis CiBf-3 mRNA for complement factor B-3, complete cds Length = 3041 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 581 acttgaggggcttcaccac 563
>dbj|AB180045.1| Ciona intestinalis CiBf-2 mRNA for complement factor B-2, complete cds Length = 2997 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 599 acttgaggggcttcaccac 581
>dbj|AB180044.1| Ciona intestinalis CiBf-1 mRNA for complement factor B-1, complete cds Length = 3614 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 602 acttgaggggcttcaccac 584
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete sequence Length = 121668 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 97640 acttgagtggcttgacgacttcccaggtgaagtca 97674
>gb|AY087703.1| Arabidopsis thaliana clone 37800 mRNA, complete sequence Length = 1529 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1291 acttgagtggcttgacgacttcccaggtgaagtca 1257
>gb|AY087184.1| Arabidopsis thaliana clone 326 mRNA, complete sequence Length = 1508 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1251 acttgagtggcttgactacctcccaggtgaa 1221
>gb|BT002665.1| Arabidopsis thaliana At3g17390/MGD8_20 gene, complete cds Length = 1182 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 1162 acttgagtggcttgactacctcccaggtgaa 1132
>emb|AL929126.25| Mouse DNA sequence from clone RP23-424N5 on chromosome 2, complete sequence Length = 151556 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 ggcttcaccacctcccagg 142 ||||||||||||||||||| Sbjct: 90850 ggcttcaccacctcccagg 90868
>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8 Length = 80167 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Plus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||| ||||| || |||||||||||||| Sbjct: 73453 acttgagtggcttgactacctcccaggtgaa 73483
>dbj|AK112764.1| Ciona intestinalis cDNA, clone:cieg055i24, full insert sequence Length = 3210 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccac 134 ||||||||||||||||||| Sbjct: 228 acttgaggggcttcaccac 210
>gb|L36680.1|PEADENSYNA Pisum sativum S-adenosylmethionine synthase mRNA, 3' end Length = 1327 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 124 ggcttcaccacctcccaggtgaagtca 150 ||||||||||| ||||| ||||||||| Sbjct: 1061 ggcttcaccacttcccatgtgaagtca 1035
>gb|M55077.1|ATHSAM A.thaliana S-adenosylmethionine synthetase gene, complete cds Length = 2559 Score = 38.2 bits (19), Expect = 7.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaagtca 150 ||||||| ||||| || || ||||||||||||||| Sbjct: 1910 acttgagtggcttgacgacttcccaggtgaagtca 1876
>dbj|AB062358.1| Phaseolus lunatus SAMS mRNA for S-adenosylmethionine synthetase, complete cds Length = 1659 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 116 acttgaggggcttcaccacctcccaggtgaa 146 ||||||||||||| ||||| ||||| ||||| Sbjct: 1411 acttgaggggcttgaccacttcccatgtgaa 1381 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,111,283 Number of Sequences: 3902068 Number of extensions: 1111283 Number of successful extensions: 120755 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120599 Number of HSP's gapped (non-prelim): 154 length of query: 153 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 132 effective length of database: 17,151,101,840 effective search space: 2263945442880 effective search space used: 2263945442880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)