ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags10j19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF320325.1|AF320325 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II mRNA, complete cds Length = 2451 Score = 1300 bits (656), Expect = 0.0 Identities = 656/656 (100%) Strand = Plus / Minus Query: 1 cggcctgatatggactttatttagtactgctgtatgtatgagtatctcctctttcttaca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2423 cggcctgatatggactttatttagtactgctgtatgtatgagtatctcctctttcttaca 2364 Query: 61 ctgtacagtgagtgctttatcaagatataagcataattactgacaagctcctccatttcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2363 ctgtacagtgagtgctttatcaagatataagcataattactgacaagctcctccatttcc 2304 Query: 121 atatcacgcctcgtgtattaatcctgtttccacgtgtcactaacgccgtgtcgctgcttc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2303 atatcacgcctcgtgtattaatcctgtttccacgtgtcactaacgccgtgtcgctgcttc 2244 Query: 181 acatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2243 acatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtggg 2184 Query: 241 cagcgagcgtgacctgcatctgttccgcggcgttatgcaactgacttgtcacgggcacga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 cagcgagcgtgacctgcatctgttccgcggcgttatgcaactgacttgtcacgggcacga 2124 Query: 301 ccttggttgggttactgaaagaattttcatcctttacattgctggacgtgagaacagtag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2123 ccttggttgggttactgaaagaattttcatcctttacattgctggacgtgagaacagtag 2064 Query: 361 cgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2063 cgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctca 2004 Query: 421 cggtgtccgacccgaagttcacaatctttactctcaggaagttattcccggaatcctgcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 cggtgtccgacccgaagttcacaatctttactctcaggaagttattcccggaatcctgcc 1944 Query: 481 aggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1943 aggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaa 1884 Query: 541 tcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtatt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1883 tcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtatt 1824 Query: 601 gttgccaggagttgaagacgatagcatctggattccacgtttgatcgttgtcgttt 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1823 gttgccaggagttgaagacgatagcatctggattccacgtttgatcgttgtcgttt 1768
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full insert sequence Length = 2272 Score = 244 bits (123), Expect = 3e-61 Identities = 288/343 (83%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1991 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1932 Query: 369 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 428 ||||| ||||| | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 1931 cccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 1872 Query: 429 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 488 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 1871 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 1812 Query: 489 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 548 ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||| Sbjct: 1811 gcagatgctgccagagaaccagagtagctggaagtgattgtaattggatgaaacatagca 1752 Query: 549 ccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgccag 608 || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1751 ccgctagattcacggaaaagagtctgcatccagtaactaggagttccgtattgttgccag 1692 Query: 609 gagttgaagacgatagcatctggattccacgtttgatcgttgt 651 ||||| || || || || ||||| |||||||||||||| |||| Sbjct: 1691 gagttaaatacaatggcgtctgggttccacgtttgatcattgt 1649 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 174 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 233 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 2126 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 2067 Query: 234 gagtgggcagcgagcgtgacctgcatctg 262 ||||| | ||| |||||||| |||||||| Sbjct: 2066 gagtgaggagcaagcgtgacttgcatctg 2038
>gb|AY106254.1| Zea mays PCO073074 mRNA sequence Length = 2589 Score = 224 bits (113), Expect = 3e-55 Identities = 383/473 (80%) Strand = Plus / Minus Query: 183 atctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtgggca 242 ||||| || ||||||| || || ||| ||||| || ||||| | || ||||||||| | | Sbjct: 2363 atctccgccacaagcttgggctcagccagcgccagatcgaaggcggtgaaggagtgagga 2304 Query: 243 gcgagcgtgacctgcatctgttccgcggcgttatgcaactgacttgtcacgggcacgacc 302 || ||||||||||||||||| ||||||||||| || ||| ||| |||| ||| | ||| Sbjct: 2303 gccagcgtgacctgcatctgctccgcggcgttgctcagctggcttttcaccggcgcaacc 2244 Query: 303 ttggttgggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcg 362 ||| | ||||||||||| || || || ||| | || |||| |||||||| || || ||| Sbjct: 2243 ttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtggcg 2184 Query: 363 tttgaccccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacg 422 |||| ||||||||||||| ||| ||| ||| ||| | |||| |||||| | ||| Sbjct: 2183 gttgatcccagcgcgttgacgctggccccgagtccgctcgtggagaccgtgaggttaacg 2124 Query: 423 gtgtccgacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccag 482 |||||||||||||||||||| | ||| |||||||||||| ||||| | | ||||||||| Sbjct: 2123 gtgtccgacccgaagttcacgaccttcactctcaggaagctattctctgcatcctgccac 2064 Query: 483 gtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatc 542 ||||| ||||| || || || |||| ||||| | ||||||||| ||| ||||||||| Sbjct: 2063 gtgatcgcagacgcggccagcgaactcgagtaccgggaactgatattaaccggatgaatc 2004 Query: 543 atggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgt 602 ||||| || || || |||||||||| | ||||||||||||| ||||||||||| || ||| Sbjct: 2003 atggcgccgcttgactcgcggaaaatcgtctgcatccagtagctaggagttccatagtgt 1944 Query: 603 tgccaggagttgaagacgatagcatctggattccacgtttgatcgttgtcgtt 655 ||||||||||||||||| ||||| || || ||||||||||| || |||||||| Sbjct: 1943 tgccaggagttgaagacaatagcgtccgggttccacgtttggtcattgtcgtt 1891
>gb|AY105192.1| Zea mays PCO073073 mRNA sequence Length = 1200 Score = 214 bits (108), Expect = 3e-52 Identities = 302/364 (82%), Gaps = 2/364 (0%) Strand = Plus / Minus Query: 294 ggcacgaccttggttgggttactgaaagaattttcatcctttacat-tgctggacgtgag 352 ||||| |||||||||||||| ||||| || ||||||||| | |||| ||||| | ||||| Sbjct: 884 ggcacaaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgag 826 Query: 353 aacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgt 412 |||||| ||| |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 825 aacagtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgt 766 Query: 413 gaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattcccgga 472 ||| |||| | || ||||||||||| | | ||||||||| |||||| | ||| |||| Sbjct: 765 cagggtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcgga 706 Query: 473 atcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaat 532 ||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| | Sbjct: 705 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 646 Query: 533 tggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagt 592 |||||| | ||| ||||||||||| |||||||||| | |||||||||||||||| ||||| Sbjct: 645 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 586 Query: 593 tccgtattgttgccaggagttgaagacgatagcatctggattccacgtttgatcgttgtc 652 ||||| || |||||||||||||||||||| || ||||| |||||||| || || ||||| Sbjct: 585 gccgtaatgctgccaggagttgaagacgattgcgtctgggttccacgtctggtcattgtc 526 Query: 653 gttt 656 |||| Sbjct: 525 gttt 522 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 179 tcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtg 238 ||||||||| || ||||||| ||||||||| || || || ||||||||| ||||||| | Sbjct: 999 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 940 Query: 239 ggcagcgagcgtgacctgcatctg 262 | ||| ||||||||||||||||| Sbjct: 939 aggagccagcgtgacctgcatctg 916
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full insert sequence Length = 2285 Score = 212 bits (107), Expect = 1e-51 Identities = 284/343 (82%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| || |||| Sbjct: 1997 gggttactaaaagagttctcatccatcacattactggatgtgagaacagtggcagttgat 1938 Query: 369 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 428 ||||| || || | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 1937 cccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 1878 Query: 429 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 488 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 1877 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 1818 Query: 489 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 548 ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| ||| ||| Sbjct: 1817 gcagatgctgccagagaaccagagtagctggaagtgattgtaactggatgaaacatagca 1758 Query: 549 ccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgccag 608 || |||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 1757 ccgctagattcaccgaaaagagtctgcatccagtaactaggagttccatattgttgccag 1698 Query: 609 gagttgaagacgatagcatctggattccacgtttgatcgttgt 651 ||||| || || || || ||||| |||||||||||||| |||| Sbjct: 1697 gagttaaatacaatggcgtctgggttccacgtttgatcattgt 1655 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 168 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 227 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 2138 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 2079 Query: 228 gagaaggagtgggcagcgagcgtgacctgcatctg 262 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 2078 gagaaagagtgaggagcaagcgtgacttgcatctg 2044
>dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B06, full insert sequence Length = 926 Score = 212 bits (107), Expect = 1e-51 Identities = 284/343 (82%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| || |||| Sbjct: 483 gggttactaaaagagttctcatccatcacattactggatgtgagaacagtggcagttgat 424 Query: 369 cccagcgcgttgatgctagcctggagcccggacacagagattgtgaggctcacggtgtcc 428 ||||| || || | | ||||| ||||| | ||||||| ||||||||||| | || Sbjct: 423 cccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatca 364 Query: 429 gacccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgata 488 ||||| ||||| | |||||||||||| | |||| |||| | ||||||||||| || || Sbjct: 363 gacccaaagtttataatctttactcttaagaagctattttcagaatcctgccaagtaatt 304 Query: 489 gcagatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggca 548 ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| ||| ||| Sbjct: 303 gcagatgctgccagagaaccagagtagctggaagtgattgtaactggatgaaacatagca 244 Query: 549 ccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgccag 608 || |||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 243 ccgctagattcaccgaaaagagtctgcatccagtaactaggagttccatattgttgccag 184 Query: 609 gagttgaagacgatagcatctggattccacgtttgatcgttgt 651 ||||| || || || || ||||| |||||||||||||| |||| Sbjct: 183 gagttaaatacaatggcgtctgggttccacgtttgatcattgt 141 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 168 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 227 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 624 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 565 Query: 228 gagaaggagtgggcagcgagcgtgacctgcatctg 262 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 564 gagaaagagtgaggagcaagcgtgacttgcatctg 530
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 192 bits (97), Expect = 1e-45 Identities = 169/193 (87%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1364752 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1364693 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 1364692 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 1364633 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||||||||||||||||||||| || || || || Sbjct: 1364632 aagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggc 1364573 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 1364572 gtctgggttccac 1364560 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 508 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaaa 567 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 1373223 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaat 1373164 Query: 568 acttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagcat 627 | |||||||||| |||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 1373163 atgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcat 1373104 Query: 628 ctggattcca 637 |||| ||||| Sbjct: 1373103 ctgggttcca 1373094 Score = 87.7 bits (44), Expect = 4e-14 Identities = 155/192 (80%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 1402777 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 1402718 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 1402717 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 1402658 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 | | |||||| ||| ||||||||||| || || || |||||||| ||||| || || || Sbjct: 1402657 atatgtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgc 1402598 Query: 626 atctggattcca 637 |||||| ||||| Sbjct: 1402597 atctgggttcca 1402586 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 174 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 233 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 1365219 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 1365160 Query: 234 gagtgggcagcgagcgtgacctgcatctg 262 ||||| | ||| |||||||| |||||||| Sbjct: 1365159 gagtgaggagcaagcgtgacttgcatctg 1365131 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1364972 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1364913 Query: 369 cccagcgcgtt 379 ||||| ||||| Sbjct: 1364912 cccagtgcgtt 1364902
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 192 bits (97), Expect = 1e-45 Identities = 169/193 (87%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1364752 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1364693 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 1364692 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 1364633 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||||||||||||||||||||| || || || || Sbjct: 1364632 aagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggc 1364573 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 1364572 gtctgggttccac 1364560 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 508 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaaa 567 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 1373223 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaat 1373164 Query: 568 acttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagcat 627 | |||||||||| |||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 1373163 atgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcat 1373104 Query: 628 ctggattcca 637 |||| ||||| Sbjct: 1373103 ctgggttcca 1373094 Score = 87.7 bits (44), Expect = 4e-14 Identities = 155/192 (80%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 1402777 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 1402718 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 1402717 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 1402658 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 | | |||||| ||| ||||||||||| || || || |||||||| ||||| || || || Sbjct: 1402657 atatgtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgc 1402598 Query: 626 atctggattcca 637 |||||| ||||| Sbjct: 1402597 atctgggttcca 1402586 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 174 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 233 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 1365219 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 1365160 Query: 234 gagtgggcagcgagcgtgacctgcatctg 262 ||||| | ||| |||||||| |||||||| Sbjct: 1365159 gagtgaggagcaagcgtgacttgcatctg 1365131 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 1364972 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 1364913 Query: 369 cccagcgcgtt 379 ||||| ||||| Sbjct: 1364912 cccagtgcgtt 1364902
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 192 bits (97), Expect = 1e-45 Identities = 169/193 (87%) Strand = Plus / Plus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 64417 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 64476 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| |||||||||||||||||| ||| ||||| |||||||| ||||| Sbjct: 64477 accagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaa 64536 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||||||||||||||||||||| || || || || Sbjct: 64537 aagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggc 64596 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 64597 gtctgggttccac 64609 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 508 cagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaaaa 567 ||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||| Sbjct: 55946 cagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaat 56005 Query: 568 acttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagcat 627 | |||||||||| |||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 56006 atgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcat 56065 Query: 628 ctggattcca 637 |||| ||||| Sbjct: 56066 ctgggttcca 56075 Score = 87.7 bits (44), Expect = 4e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 |||||||||||| ||| ||| | | || || ||||||||||| ||||| || || | || Sbjct: 26392 ctttactctcagaaagatatcctcagagtcttgccaggtgattgcagaagcagccaatga 26451 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 | |||| || ||||||||||| ||||| |||||||||| | |||||| ||||| ||||| Sbjct: 26452 atcagaatatctggaactgatcgtaatcggatgaatcacagaaccacttgattcacggaa 26511 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 | | |||||| ||| ||||||||||| || || || |||||||| ||||| || || || Sbjct: 26512 atatgtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgc 26571 Query: 626 atctggattcca 637 |||||| ||||| Sbjct: 26572 atctgggttcca 26583 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 174 ctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaag 233 ||||||||||||||||| || || | |||||| ||||||||||| ||||| |||||||| Sbjct: 63950 ctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaa 64009 Query: 234 gagtgggcagcgagcgtgacctgcatctg 262 ||||| | ||| |||||||| |||||||| Sbjct: 64010 gagtgaggagcaagcgtgacttgcatctg 64038 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagtagcgtttgac 368 |||||||| ||||| || |||||| | ||||||||||| |||| |||||| || |||| Sbjct: 64197 gggttactaaaagagttctcatccatcacattgctggatgtgataacagtggcagttgat 64256 Query: 369 cccagcgcgtt 379 ||||| ||||| Sbjct: 64257 cccagtgcgtt 64267
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 79247 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 79188 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| | ||| Sbjct: 79187 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaa 79128 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 79127 aagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggc 79068 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 79067 gtctgggttccac 79055 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Minus Query: 474 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 533 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 86601 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 86542 Query: 534 ggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagtt 593 |||||||||| | |||||| ||||| |||||| | | |||||||| |||||||||||| Sbjct: 86541 ggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtt 86482 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || |||||||||||||||||||| || |||||||| ||||| Sbjct: 86481 ccatactgttgccaggagttgaagacaattgcatctgggttcca 86438 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 110798 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 110739 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 110738 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 110679 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 110678 ctgttgccaggaattgaatacaattgcatctgggttcca 110640 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 168 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 227 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 79719 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 79660 Query: 228 gagaaggagtgggcagcgagcgtgacctgcatctg 262 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 79659 gagaaagagtgaggagcaagcgtgacttgcatctg 79625 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 358 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 79466 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 79417
>gb|AF320324.1|AF320324 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I mRNA, complete cds Length = 2068 Score = 168 bits (85), Expect = 1e-38 Identities = 286/353 (81%) Strand = Plus / Minus Query: 288 gtcacgggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggac 347 ||||| ||||| |||||| |||||||| |||||| || || ||| ||||| || || Sbjct: 1898 gtcaccggcacaaccttgtttgggttagcgaaagagttctcgtccattacaccgccagat 1839 Query: 348 gtgagaacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagag 407 |||||||| || ||| | || || | ||| |||||||| |||||||||| | | | ||| Sbjct: 1838 gtgagaacggtcgcggtggatccgaacgcattgatgctgccctggagcccagtcgccgag 1779 Query: 408 attgtgaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattc 467 || ||||||| ||||| || | |||||| ||||||||||| |||||||||||| | ||| Sbjct: 1778 atggtgaggcccacggcatctggcccgaaattcacaatcttcactctcaggaagctgttc 1719 Query: 468 ccggaatcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgatt 527 || ||| ||||| ||||| ||||||||||| || |||||||| |||| ||||||| Sbjct: 1718 tcgtcatcatgccacgtgatcgcagatgctgccagcaaaccagagcagcttgaactgaga 1659 Query: 528 gtaattggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaacta 587 | || ||||| | | | ||||| || ||||| ||||||| | |||||||||||||||| Sbjct: 1658 ctgatgggatggaccgtagcaccgcttgattctcggaaaagcgtctgcatccagtaactg 1599 Query: 588 ggagttccgtattgttgccaggagttgaagacgatagcatctggattccacgt 640 |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 1598 ggagttccgtattgctgccaggagttgaagacgatagcgtctgggttccacgt 1546
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1460452 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1460393 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| | ||| Sbjct: 1460392 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaa 1460333 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 1460332 aagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggc 1460273 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 1460272 gtctgggttccac 1460260 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Minus Query: 474 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 533 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1467806 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1467747 Query: 534 ggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagtt 593 |||||||||| | |||||| ||||| |||||| | | |||||||| |||||||||||| Sbjct: 1467746 ggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtt 1467687 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || |||||||||||||||||||| || |||||||| ||||| Sbjct: 1467686 ccatactgttgccaggagttgaagacaattgcatctgggttcca 1467643 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1492003 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1491944 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 1491943 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1491884 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 1491883 ctgttgccaggaattgaatacaattgcatctgggttcca 1491845 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 168 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 227 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 1460924 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 1460865 Query: 228 gagaaggagtgggcagcgagcgtgacctgcatctg 262 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 1460864 gagaaagagtgaggagcaagcgtgacttgcatctg 1460830 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 358 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 1460671 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 1460622
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 446 ctttactctcaggaagttattcccggaatcctgccaggtgatagcagatgctgctagaga 505 ||||||||| | |||| |||| | ||||||||||| || || ||||||||||| ||||| Sbjct: 1458173 ctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagaga 1458114 Query: 506 accagagtagctggaactgattgtaattggatgaatcatggcaccactagattcgcggaa 565 |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| | ||| Sbjct: 1458113 accagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaa 1458054 Query: 566 aaacttctgcatccagtaactaggagttccgtattgttgccaggagttgaagacgatagc 625 || ||||||||||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 1458053 aagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggc 1457994 Query: 626 atctggattccac 638 ||||| |||||| Sbjct: 1457993 gtctgggttccac 1457981 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Minus Query: 474 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 533 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1465527 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1465468 Query: 534 ggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagtt 593 |||||||||| | |||||| ||||| |||||| | | |||||||| |||||||||||| Sbjct: 1465467 ggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtt 1465408 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || |||||||||||||||||||| || |||||||| ||||| Sbjct: 1465407 ccatactgttgccaggagttgaagacaattgcatctgggttcca 1465364 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1489724 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1489665 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 1489664 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1489605 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 1489604 ctgttgccaggaattgaatacaattgcatctgggttcca 1489566 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 168 gtgtcgctgcttcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgag 227 |||| |||||||||||||||||| || || | |||||| ||||||||||| ||||| ||| Sbjct: 1458645 gtgttgctgcttcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgag 1458586 Query: 228 gagaaggagtgggcagcgagcgtgacctgcatctg 262 ||||| ||||| | ||| |||||||| |||||||| Sbjct: 1458585 gagaaagagtgaggagcaagcgtgacttgcatctg 1458551 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 309 gggttactgaaagaattttcatcctttacattgctggacgtgagaacagt 358 |||||||| ||||| || |||||| | ||||| ||||| ||||||||||| Sbjct: 1458392 gggttactaaaagagttctcatccatcacattactggatgtgagaacagt 1458343
>gb|BT017207.1| Zea mays clone EL01N0371H11.c mRNA sequence Length = 614 Score = 159 bits (80), Expect = 1e-35 Identities = 247/300 (82%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 294 ggcacgaccttggttgggttactgaaagaattttcatcctttacat-tgctggacgtgag 352 ||||| |||||||||||||| ||||| || ||||||||| | |||| ||||| | ||||| Sbjct: 310 ggcacaaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgag 252 Query: 353 aacagtagcgtttgaccccagcgcgttgatgctagcctggagcccggacacagagattgt 412 |||||| ||| |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 251 aacagtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgt 192 Query: 413 gaggctcacggtgtccgacccgaagttcacaatctttactctcaggaagttattcccgga 472 ||| |||| | || ||||||||||| | | ||||||||| |||||| | ||| |||| Sbjct: 191 cagggtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcgga 132 Query: 473 atcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaat 532 ||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| | Sbjct: 131 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 72 Query: 533 tggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagt 592 |||||| | ||| ||||||||||| |||||||||| | |||||||||||||||| ||||| Sbjct: 71 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 12 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 179 tcacatctctgcgacaagctcggactgagcaagcgcaaggtcgaacgaggagaaggagtg 238 ||||||||| || ||||||| ||||||||| || || || ||||||||| ||||||| | Sbjct: 425 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 366 Query: 239 ggcagcgagcgtgacctgcatctg 262 | ||| ||||||||||||||||| Sbjct: 365 aggagccagcgtgacctgcatctg 342
>dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E09, full insert sequence Length = 3254 Score = 149 bits (75), Expect = 1e-32 Identities = 174/207 (84%) Strand = Plus / Minus Query: 431 cccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgatagc 490 ||||||||| || ||||| |||||||| ||| ||||| | | || ||||||||||| || Sbjct: 1856 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1797 Query: 491 agatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggcacc 550 ||| || || | || ||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1796 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1737 Query: 551 actagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgccagga 610 || ||||| |||||| | |||||||||| |||||||||||||| || ||||||||||| Sbjct: 1736 gcttgattcacggaaatatgtctgcatccaataactaggagttccatactgttgccagga 1677 Query: 611 gttgaagacgatagcatctggattcca 637 ||||||||| || |||||||| ||||| Sbjct: 1676 gttgaagacaatcgcatctgggttcca 1650 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 ggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggacgtgaga 353 |||||||||||| |||| | ||| || |||||||||||| | |||||||| |||||| Sbjct: 1993 ggcacgaccttgtttggttcactaaatgaattttcatccagcaagttgctggatgtgaga 1934 Query: 354 acagt 358 ||||| Sbjct: 1933 acagt 1929
>dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B08, full insert sequence Length = 2783 Score = 149 bits (75), Expect = 1e-32 Identities = 174/207 (84%) Strand = Plus / Minus Query: 431 cccgaagttcacaatctttactctcaggaagttattcccggaatcctgccaggtgatagc 490 ||||||||| || ||||| |||||||| ||| ||||| | | || ||||||||||| || Sbjct: 2047 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1988 Query: 491 agatgctgctagagaaccagagtagctggaactgattgtaattggatgaatcatggcacc 550 ||| || || | || ||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1987 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1928 Query: 551 actagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgccagga 610 || ||||| |||||| | |||||||||| |||||||||||||| || ||||||||||| Sbjct: 1927 gcttgattcacggaaatatgtctgcatccaataactaggagttccatactgttgccagga 1868 Query: 611 gttgaagacgatagcatctggattcca 637 ||||||||| || |||||||| ||||| Sbjct: 1867 gttgaagacaatcgcatctgggttcca 1841 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 ggcacgaccttggttgggttactgaaagaattttcatcctttacattgctggacgtgaga 353 |||||||||||| |||| | ||| || |||||||||||| | |||||||| |||||| Sbjct: 2184 ggcacgaccttgtttggttcactaaatgaattttcatccagcaagttgctggatgtgaga 2125 Query: 354 acagt 358 ||||| Sbjct: 2124 acagt 2120
>dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067L10, full insert sequence Length = 2367 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Minus Query: 474 tcctgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaatt 533 |||||||||||||| ||||||||||| || || || |||||||||| ||||| || | | Sbjct: 1897 tcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgact 1838 Query: 534 ggatgaatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagtt 593 |||||||||| | |||||| ||||| |||||| | | |||||||| |||||||||||| Sbjct: 1837 ggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtt 1778 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || |||||||||||||||||||| || |||||||| ||||| Sbjct: 1777 ccatactgttgccaggagttgaagacaattgcatctgggttcca 1734
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 6539 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 6480 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 6479 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 6420 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 6419 ctgttgccaggaattgaatacaattgcatctgggttcca 6381
>dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096C04, full insert sequence Length = 2409 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 1886 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1827 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 1826 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1767 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 1766 ctgttgccaggaattgaatacaattgcatctgggttcca 1728
>dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G03, full insert sequence Length = 1396 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattggatg 538 ||||||||| |||||||| || || ||| | ||||||||||||| ||| ||||||||||| Sbjct: 873 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 814 Query: 539 aatcatggcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgta 598 ||||| | |||||| ||||| |||||| | | |||||||| ||||||||||| || || Sbjct: 813 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 754 Query: 599 ttgttgccaggagttgaagacgatagcatctggattcca 637 ||||||||||| ||||| || || |||||||| ||||| Sbjct: 753 ctgttgccaggaattgaatacaattgcatctgggttcca 715
>ref|XM_471515.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1965 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 546 gcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgc 605 |||||||| ||||||||||||| |||||||||||||||||||| |||| || |||| | Sbjct: 1604 gcaccactcgattcgcggaaaattgtctgcatccagtaactaggacttccatactgtttc 1545 Query: 606 caggagttgaagacgatagcatctggattccacg 639 || ||||||||||||| |||| |||| ||||||| Sbjct: 1544 catgagttgaagacgacagcagctgggttccacg 1511
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 546 gcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgc 605 |||||||| ||||||||||||| |||||||||||||||||||| |||| || |||| | Sbjct: 11555907 gcaccactcgattcgcggaaaattgtctgcatccagtaactaggacttccatactgtttc 11555966 Query: 606 caggagttgaagacgatagcatctggattccac 638 || ||||||||||||| |||| |||| |||||| Sbjct: 11555967 catgagttgaagacgacagcagctgggttccac 11555999
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 546 gcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgc 605 |||||||| ||||||||||||| |||||||||||||||||||| |||| || |||| | Sbjct: 38917 gcaccactcgattcgcggaaaattgtctgcatccagtaactaggacttccatactgtttc 38976 Query: 606 caggagttgaagacgatagcatctggattccac 638 || ||||||||||||| |||| |||| |||||| Sbjct: 38977 catgagttgaagacgacagcagctgggttccac 39009
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 546 gcaccactagattcgcggaaaaacttctgcatccagtaactaggagttccgtattgttgc 605 ||||| || ||||| |||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 114205 gcaccgcttgattcacggaaaaatgtctgcatccagtaactcggagttccgtactgttgc 114264 Query: 606 caggagttgaagac 619 || ||||||||||| Sbjct: 114265 cacgagttgaagac 114278
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 7e-13 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 477 tgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattgga 536 ||||||||||| |||||||| || | | | ||||||||| |||||||| |||| ||| Sbjct: 15689042 tgccaggtgattgcagatgcagccaacgcatcagagtagccagaactgatcataatcgga 15688983 Query: 537 tgaatcatggcaccactagattcgcggaaaaact---tctgcatccagtaactaggagtt 593 ||||||| | |||||| ||||| |||||| | | |||||||||| |||||| ||||| Sbjct: 15688982 tgaatcacagaaccacttgattcacggaaatattatgtctgcatccaataactatgagtt 15688923 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || ||||||||||| ||||| || || |||||||||||||| Sbjct: 15688922 ccatactgttgccaggaattgaacacaattgcatctggattcca 15688879 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ttggttgggttactgaaaga 322 |||||||||||||||||||| Sbjct: 3063442 ttggttgggttactgaaaga 3063461
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 83.8 bits (42), Expect = 7e-13 Identities = 134/164 (81%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 477 tgccaggtgatagcagatgctgctagagaaccagagtagctggaactgattgtaattgga 536 ||||||||||| |||||||| || | | | ||||||||| |||||||| |||| ||| Sbjct: 97729 tgccaggtgattgcagatgcagccaacgcatcagagtagccagaactgatcataatcgga 97670 Query: 537 tgaatcatggcaccactagattcgcggaaaaact---tctgcatccagtaactaggagtt 593 ||||||| | |||||| ||||| |||||| | | |||||||||| |||||| ||||| Sbjct: 97669 tgaatcacagaaccacttgattcacggaaatattatgtctgcatccaataactatgagtt 97610 Query: 594 ccgtattgttgccaggagttgaagacgatagcatctggattcca 637 || || ||||||||||| ||||| || || |||||||||||||| Sbjct: 97609 ccatactgttgccaggaattgaacacaattgcatctggattcca 97566
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence Length = 96930 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 607 aggagttgaagacgatagcatctggattccac 638 ||||||||||||| || ||||||||||||||| Sbjct: 66877 aggagttgaagacaattgcatctggattccac 66908
>gb|AC097655.2| Homo sapiens BAC clone RP11-284H12 from 4, complete sequence Length = 77111 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 472 aatcctgccaggtgatagcaga 493 |||||||||||||||||||||| Sbjct: 13170 aatcctgccaggtgatagcaga 13149
>dbj|D29742.1| Daucus carota mRNA for arabinofuranosidase, complete cds Length = 2502 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 gaaaaacttctgcatccagtaactaggagt 592 |||||||| |||||||||||||||||||| Sbjct: 1813 gaaaaactgttgcatccagtaactaggagt 1784
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gagtgctttatcaagatataa 90 ||||||||||||||||||||| Sbjct: 148206 gagtgctttatcaagatataa 148186
>gb|AC157365.5| Mus musculus chromosome 8, clone RP23-113A2, complete sequence Length = 193347 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 481 aggtgatagcagatgctgctagaga 505 |||||| |||||||||||||||||| Sbjct: 898 aggtgacagcagatgctgctagaga 874
>gb|AC139357.27| Mus musculus chromosome 8, clone RP24-335I20, complete sequence Length = 183851 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 481 aggtgatagcagatgctgctagaga 505 |||||| |||||||||||||||||| Sbjct: 59923 aggtgacagcagatgctgctagaga 59899
>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence Length = 182073 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 acactgtacagtgagtgctttatc 81 |||||| ||||||||||||||||| Sbjct: 80588 acactgcacagtgagtgctttatc 80565
>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence Length = 216368 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 61123 ccaggtgatagcagatgctg 61142
>gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, complete sequence Length = 197206 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 101214 ccaggtgatagcagatgctg 101195
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 78783 ccaggtgatagcagatgctg 78764
>gb|AC161236.6| Mus musculus chromosome 3, clone RP23-403O4, complete sequence Length = 206652 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 62481 ccaggtgatagcagatgctg 62500
>gb|AC115300.4| Mus musculus BAC clone RP24-74P1 from chromosome 10, complete sequence Length = 199750 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 175749 ccaggtgatagcagatgctg 175730
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 250073 ccaggtgatagcagatgctg 250092
>gb|AF110089.2| Sepioteuthis lessoniana strain C 16S ribosomal RNA gene, partial sequence Length = 422 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 275 acaatctttactctaaggaagtta 252
>gb|AY131035.1| Sepioteuthis lessoniana isolate ha29 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131034.1| Sepioteuthis lessoniana isolate ha28 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131033.1| Sepioteuthis lessoniana isolate ha27 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131032.1| Sepioteuthis lessoniana isolate ha26 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131031.1| Sepioteuthis lessoniana isolate ha25 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131030.1| Sepioteuthis lessoniana isolate ha24 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131029.1| Sepioteuthis lessoniana isolate ha23 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131028.1| Sepioteuthis lessoniana isolate ha22 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131027.1| Sepioteuthis lessoniana isolate ha21 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131026.1| Sepioteuthis lessoniana isolate ha20 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131025.1| Sepioteuthis lessoniana isolate ha19 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131024.1| Sepioteuthis lessoniana isolate ha18 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131023.1| Sepioteuthis lessoniana isolate ha17 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131022.1| Sepioteuthis lessoniana isolate ha16 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 476 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 289 acaatctttactctaaggaagtta 266
>gb|AY131021.1| Sepioteuthis lessoniana isolate ha15 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131020.1| Sepioteuthis lessoniana isolate ha14 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131019.1| Sepioteuthis lessoniana isolate ha13 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 477 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 290 acaatctttactctaaggaagtta 267
>gb|AY131018.1| Sepioteuthis lessoniana isolate ha12 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131017.1| Sepioteuthis lessoniana isolate ha11 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131016.1| Sepioteuthis lessoniana isolate ha10 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131015.1| Sepioteuthis lessoniana isolate ha9 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131014.1| Sepioteuthis lessoniana isolate ha8 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131013.1| Sepioteuthis lessoniana isolate ha7 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131012.1| Sepioteuthis lessoniana isolate ha6 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131011.1| Sepioteuthis lessoniana isolate ha5 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131010.1| Sepioteuthis lessoniana isolate ha4 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131009.1| Sepioteuthis lessoniana isolate ha3 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131008.1| Sepioteuthis lessoniana isolate ha2 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AY131007.1| Sepioteuthis lessoniana isolate ha1 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 478 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 291 acaatctttactctaaggaagtta 268
>gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome 1, complete sequence Length = 200598 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 caggtgatagcagatgctgc 499 |||||||||||||||||||| Sbjct: 123844 caggtgatagcagatgctgc 123825
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 52366 ccaggtgatagcagatgctg 52385
>emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in linkage group 8, complete sequence Length = 193025 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ctcctccatttccatatcac 127 |||||||||||||||||||| Sbjct: 141619 ctcctccatttccatatcac 141638
>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence Length = 198227 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 caggtgatagcagatgctgc 499 |||||||||||||||||||| Sbjct: 134013 caggtgatagcagatgctgc 134032
>dbj|AB240154.1| Sepioteuthis lessoniana mitochondrial DNA, complete genome Length = 16631 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 12794 acaatctttactctaaggaagtta 12817
>gb|AF448761.1| Chamaeleo rudis NADH dehydrogenase subunit 1 (ND1) gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial genes for mitochondrial products Length = 1716 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tatttagtactgctgtatgt 37 |||||||||||||||||||| Sbjct: 893 tatttagtactgctgtatgt 874
>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence Length = 205466 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 24753 ccaggtgatagcagatgctg 24772
>gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complete sequence Length = 159797 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 aatcctgccaggtgatagca 491 |||||||||||||||||||| Sbjct: 104260 aatcctgccaggtgatagca 104279
>gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosome 7, complete sequence Length = 186014 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 caggtgatagcagatgctgc 499 |||||||||||||||||||| Sbjct: 66327 caggtgatagcagatgctgc 66346
>dbj|AP005896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0032C09 Length = 127263 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ttggttgggttactgaaaga 322 |||||||||||||||||||| Sbjct: 109553 ttggttgggttactgaaaga 109572
>dbj|BS000127.1| Pan troglodytes chromosome 22 clone:PTB-099K02, map 22, complete sequences Length = 191424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 164688 tttcttacactgtacagtga 164707
>dbj|AP001731.1| Homo sapiens genomic DNA, chromosome 21q, section 75/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 150153 tttcttacactgtacagtga 150172
>dbj|AP003083.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-179B7, complete sequence Length = 161488 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 tttcatcctttacattgctg 344 |||||||||||||||||||| Sbjct: 142221 tttcatcctttacattgctg 142202
>emb|AJ001649.1|SLAJ1649 Sepioteuthis lessoniana 16S rRNA gene Length = 505 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 330 acaatctttactctaaggaagtta 307
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 acgtgtcactaacgccgtgt 171 |||||||||||||||||||| Sbjct: 3140757 acgtgtcactaacgccgtgt 3140738
>gb|AC151997.2| Mus musculus BAC clone RP23-138O21 from 8, complete sequence Length = 201556 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 82668 ccaggtgatagcagatgctg 82687
>gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complete sequence Length = 200104 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 caggtgatagcagatgctgc 499 |||||||||||||||||||| Sbjct: 78849 caggtgatagcagatgctgc 78830
>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence Length = 191505 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccaggtgatagcagatgctg 498 |||||||||||||||||||| Sbjct: 119610 ccaggtgatagcagatgctg 119629
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 acgtgtcactaacgccgtgt 171 |||||||||||||||||||| Sbjct: 3069488 acgtgtcactaacgccgtgt 3069469
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 acgtgtcactaacgccgtgt 171 |||||||||||||||||||| Sbjct: 2227282 acgtgtcactaacgccgtgt 2227263
>gb|L02053.1|OMMGSHTR1 Ommastrephes sloani glutathione transferase gene, exon 1 Length = 3800 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agctggaactgattgtaatt 533 |||||||||||||||||||| Sbjct: 1839 agctggaactgattgtaatt 1858
>emb|X79571.1|MISLLRR S.lessoniana mitochondria lrRNA gene Length = 474 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 acaatctttactctcaggaagtta 464 |||||||||||||| ||||||||| Sbjct: 298 acaatctttactctaaggaagtta 275
>emb|AL845283.4| Mouse DNA sequence from clone RP23-151F21 on chromosome 2, complete sequence Length = 178403 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 caggtgatagcagatgctgc 499 |||||||||||||||||||| Sbjct: 74487 caggtgatagcagatgctgc 74506
>dbj|AP000162.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 14/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 36570 tttcttacactgtacagtga 36589
>dbj|AP000020.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 11/13 Length = 100000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 70966 tttcttacactgtacagtga 70985
>dbj|AP001438.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T695, LB7T-ERG region, complete sequence Length = 17829 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 4110 tttcttacactgtacagtga 4129
>dbj|AP001434.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T2079, LB7T-ERG region, complete sequence Length = 74817 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttcttacactgtacagtga 71 |||||||||||||||||||| Sbjct: 71621 tttcttacactgtacagtga 71640 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,185,810 Number of Sequences: 3902068 Number of extensions: 5185810 Number of successful extensions: 151578 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151085 Number of HSP's gapped (non-prelim): 485 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
