| Clone Name | rbags10j18 |
|---|---|
| Clone Library Name | barley_pub |
>IL17_BOVIN (Q687Y7) Interleukin-17A precursor (IL-17A) (IL-17)| Length = 153 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -1 Query: 374 SANTREPLPLHINLVSTSSWTVHRPLAPKRS*LVYWSNCFLITLLI*ICEHTGIV 210 S N+R P H STS WT+HR P+R V W C H+G + Sbjct: 55 STNSRRPTDYHKR--STSPWTLHRNEDPERYPSVIWEA---------KCSHSGCI 98
>TERT_MOUSE (O70372) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 1122 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 52 YDLDNCIDTEHCLYSESSKQKKYNSSFIPQNVKRN 156 + L I+T H LYS Q++ N SF+ N++ N Sbjct: 324 FQLRPFIETRHFLYSRGDGQERLNPSFLLSNLQPN 358
>VRAA_STAAR (Q6GJ94) Putative long chain fatty acid CoA ligase vraA (EC| 6.2.1.-) (Acyl-CoA synthetase) Length = 458 Score = 28.1 bits (61), Expect = 8.3 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +1 Query: 73 DTEHCLYSE-SSKQKKYNSSFIPQNVKRNKLNLTHH*GMISLSYISVTIPVCSQI*INRV 249 + EH + S SS K Y+S F + N +NL G S+IS + + + V Sbjct: 234 NNEHTIQSFFSSGDKLYSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGV 293 Query: 250 IKKQLD-QYTNHDLFGANGLWTVHDEVETRLMWSG 351 + ++ + TNHD NG+ T+ V++ +M+SG Sbjct: 294 LFPNVELKTTNHD---HNGIGTIC--VKSNMMFSG 323
>NCAM2_MOUSE (O35136) Neural cell adhesion molecule 2 precursor (N-CAM 2) (RB-8| neural cell adhesion molecule) (R4B12) Length = 837 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -2 Query: 403 ETICIRNTSPAPIQGNLYHSTSISSLP 323 E +C ++SPAP LYH+ ++++P Sbjct: 133 EVVCRVSSSPAPAVSWLYHNEEVTTIP 159
>UQCR2_EUGGR (P43265) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) Length = 474 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 147 EKEQTKSDSPLGYDQSIIHISHYSG 221 E ++TK DSP Y Q I+H + + G Sbjct: 181 ESKETKRDSPFAYLQDILHKTAFKG 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,963,837 Number of Sequences: 219361 Number of extensions: 1088693 Number of successful extensions: 2523 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2523 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)