ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags10j13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X75778.1|ASTCPP1A A.sativa (Pewi) ASTCP-K36 mRNA for t complex polypeptide 1 Length = 2022 Score = 462 bits (233), Expect = e-127 Identities = 298/320 (93%) Strand = Plus / Minus Query: 177 gaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaag 236 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1730 gaaggcgtgataacatcatcgatcttgaggatcatcttgacgacctgggttgccagcaag 1671 Query: 237 atctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggta 296 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1670 atctgctgctgcttgccaatcagagtttcgaaaacattctgctctttcatgtcattggta 1611 Query: 297 ccaacatcattgcaatcgatgccacagcgggaattgttctccttgacgtgttgagatttt 356 || |||||||||||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 1610 cccacatcattgcaatcaatgccgcaacgagaattgttctccttgacatgttgagatttt 1551 Query: 357 acgacggtgagagtatcaataggtgccaaaccactgttttcagctaaagctagtggaatg 416 || ||||| |||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 1550 accacggtcagagtatcaataggtggcaaaccactgttttcagctaaagccaatggaata 1491 Query: 417 gcatccaaagcatcancaaatgccctgattgcatactgctcaactccaggatgccgatct 476 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1490 gcatccaaagcatcagcaaatgccctgattgcatactgttcaactccaggatgccgatct 1431 Query: 477 gctgcagcgtcaacagcaat 496 || ||||| ||||||||||| Sbjct: 1430 gcagcagcttcaacagcaat 1411
>emb|X75777.1|ASTCPP1 A.sativa (Pewi) ASTCP-K19 mRNA for t complex polypeptide 1 Length = 2039 Score = 458 bits (231), Expect = e-126 Identities = 305/330 (92%) Strand = Plus / Minus Query: 167 tcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgtgt 226 |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 1715 tcaatattcggaaggcgtgataacatcatcgatcttgaggatcatcttgacgacctgggt 1656 Query: 227 tgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcat 286 ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 1655 tgccagcaagatctgctgctgcttgccaatcagagtttcaaaaacattctgctctttcat 1596 Query: 287 gtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacgtg 346 ||| |||||||| ||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 1595 gtcattggtacccacatcgttgcagtcaatgccgcagcgggaattgttctccttgacatg 1536 Query: 347 ttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaagc 406 ||| |||||||| || || |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1535 ttgggattttaccactgtcagagtatcaataggtggcaaaccactgttttcagctaaagc 1476 Query: 407 tagtggaatggcatccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1475 cagtggaatagcatccaaagcatcagcaaatgccctgattgcatactgctcaactccagg 1416 Query: 467 atgccgatctgctgcagcgtcaacagcaat 496 ||||||||| || ||||| ||||||||||| Sbjct: 1415 atgccgatcagcagcagcttcaacagcaat 1386
>dbj|AK105701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D07, full insert sequence Length = 2088 Score = 278 bits (140), Expect = 2e-71 Identities = 283/331 (85%) Strand = Plus / Minus Query: 165 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 224 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1703 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 1644 Query: 225 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 284 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 1643 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 1584 Query: 285 atgtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacg 344 |||| ||| || |||||||| ||||| || ||||||||| | | |||| ||||||| || Sbjct: 1583 atgtggtttgtcccaacatcgttgcagtcaatgccacagtgaggattgctctcctttact 1524 Query: 345 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 404 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 1523 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 1464 Query: 405 gctagtggaatggcatccaaagcatcancaaatgccctgattgcatactgctcaactcca 464 ||||||||||| |||||||| |||||| |||||| ||||||||||||||| |||||||| Sbjct: 1463 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgttcaactcct 1404 Query: 465 ggatgccgatctgctgcagcgtcaacagcaa 495 || | ||||||||| ||||| |||||||||| Sbjct: 1403 gggtaccgatctgcagcagcttcaacagcaa 1373
>dbj|AK067114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095K16, full insert sequence Length = 2100 Score = 278 bits (140), Expect = 2e-71 Identities = 283/331 (85%) Strand = Plus / Minus Query: 165 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 224 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1717 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 1658 Query: 225 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 284 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 1657 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 1598 Query: 285 atgtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacg 344 |||| ||| || |||||||| ||||| || ||||||||| | | |||| ||||||| || Sbjct: 1597 atgtggtttgtcccaacatcgttgcagtcaatgccacagtgaggattgctctcctttact 1538 Query: 345 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 404 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 1537 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 1478 Query: 405 gctagtggaatggcatccaaagcatcancaaatgccctgattgcatactgctcaactcca 464 ||||||||||| |||||||| |||||| |||||| ||||||||||||||| |||||||| Sbjct: 1477 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgttcaactcct 1418 Query: 465 ggatgccgatctgctgcagcgtcaacagcaa 495 || | ||||||||| ||||| |||||||||| Sbjct: 1417 gggtaccgatctgcagcagcttcaacagcaa 1387
>gb|BT017463.1| Zea mays clone EL01N0407F08.c mRNA sequence Length = 710 Score = 216 bits (109), Expect = 5e-53 Identities = 255/304 (83%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| ||||||||||| || ||||| ||||| |||| |||||||||||||||||| Sbjct: 379 tcgatcttcaggatcatcttcaccacctgagttgctagcaggatctgctgctgcttgcca 320 Query: 255 atcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattgcaatcg 314 ||||| ||||| || || ||||||||||||||||||||||| || ||||| ||||| || Sbjct: 319 atcagggtctcaaagacgttctgctctttcatgtcgttggtgcctacatcgttgcagtct 260 Query: 315 atgccacagcgggaattgttctccttgacgtgttgagattttacgacggtgagagtatca 374 ||||| ||| ||| ||| ||||||| || || |||| |||||| | || | |||||| Sbjct: 259 atgccgcagtgggggttgctctccttaacttgctgagcttttaccgccgtcaaggtatca 200 Query: 375 ataggtgccaaaccactgttttcagctaaagctagtggaatggcatccaaagcatcanca 434 || || | |||||||||||||||||| || |||||||||| ||||| || |||||| | Sbjct: 199 attggcgacaaaccactgttttcagccaaggctagtggaacagcatctaatgcatcagcg 140 Query: 435 aatgccctgattgcatactgctcaactccaggatgccgatctgctgcagcgtcaacagca 494 |||| |||||| || ||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 139 aatgacctgatagcgtactgctcaactccagggtgccgatctgcagcagtttcaacagca 80 Query: 495 attg 498 |||| Sbjct: 79 attg 76
>gb|AY103729.1| Zea mays PCO099347 mRNA sequence Length = 2083 Score = 212 bits (107), Expect = 8e-52 Identities = 259/310 (83%) Strand = Plus / Minus Query: 189 acatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgc 248 ||||| |||||||| ||||||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1706 acatcgtcgatcttcaggatcatcttcaccacctgggtggcaagcaagatctgttgctgc 1647 Query: 249 ttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattg 308 ||||| ||||| |||||||| || ||||| |||||||||||| |||| ||||| || ||| Sbjct: 1646 ttgccaatcagggtctcgaagacgttctgttctttcatgtcggtggtgccaacgtcgttg 1587 Query: 309 caatcgatgccacagcgggaattgttctccttgacgtgttgagattttacgacggtgaga 368 || || ||||| ||| ||| ||| |||||||||| ||||||| |||||| | || | Sbjct: 1586 cagtctatgccgcagtgggggttgctctccttgacttgttgagcttttaccgcagttaag 1527 Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtggaatggcatccaaagca 428 |||||||| |||| ||||||||||||||| || || |||||||||| ||||| || ||| Sbjct: 1526 gtatcaattggtgacaaaccactgttttcggccaacgctagtggaacagcatctaatgca 1467 Query: 429 tcancaaatgccctgattgcatactgctcaactccaggatgccgatctgctgcagcgtca 488 ||| | |||| |||||| ||||||||||||||||| || |||| |||||| |||| ||| Sbjct: 1466 tcagcgaatgacctgatagcatactgctcaactcccgggtgcctatctgcagcagtttca 1407 Query: 489 acagcaattg 498 |||||||||| Sbjct: 1406 acagcaattg 1397
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 2e-30 Identities = 137/159 (86%) Strand = Plus / Plus Query: 165 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 224 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 21250809 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 21250868 Query: 225 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 284 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 21250869 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 21250928 Query: 285 atgtcgttggtaccaacatcattgcaatcgatgccacag 323 |||| ||| || |||||||| ||||| || ||||||||| Sbjct: 21250929 atgtggtttgtcccaacatcgttgcagtcaatgccacag 21250967 Score = 111 bits (56), Expect = 2e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 345 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 404 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 21251268 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 21251327 Query: 405 gctagtggaatggcatccaaagcatcancaaatgccctgattgcatactgc 455 ||||||||||| |||||||| |||||| |||||| |||||||||||||||| Sbjct: 21251328 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgc 21251378
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 141 bits (71), Expect = 2e-30 Identities = 137/159 (86%) Strand = Plus / Plus Query: 165 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 224 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 46185 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 46244 Query: 225 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 284 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 46245 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 46304 Query: 285 atgtcgttggtaccaacatcattgcaatcgatgccacag 323 |||| ||| || |||||||| ||||| || ||||||||| Sbjct: 46305 atgtggtttgtcccaacatcgttgcagtcaatgccacag 46343 Score = 111 bits (56), Expect = 2e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 345 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 404 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 46644 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 46703 Query: 405 gctagtggaatggcatccaaagcatcancaaatgccctgattgcatactgc 455 ||||||||||| |||||||| |||||| |||||| |||||||||||||||| Sbjct: 46704 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgc 46754
>gb|AF097668.1|AF097668 Mesembryanthemum crystallinum T-complex protein 1 epsilon subunit (TCP-1-EPSILON) mRNA, partial cds Length = 1458 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 186 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 245 ||||||||||||||||| | |||||||| |||||||| || |||||||| | ||| ||| Sbjct: 1238 ataacatcatcgatcttcaaaatcatcttcacaacctgagtagccagcaaaagctgttgc 1179 Query: 246 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 305 | ||| || |||| |||||||||||||||||||| ||||||||| || |||||||| Sbjct: 1178 ttctttccaatcaatgtctcgaaaacattctgctcacgcatgtcgtttgtgccaacatcg 1119 Query: 306 ttgcaatcgatgccacagcgggaattgttctccttgacgtgttgagattt 355 ||||| || || ||||||| | |||||||||||| || || |||||||| Sbjct: 1118 ttgcagtctataccacagcatggattgttctccttaacttgctgagattt 1069 Score = 58.0 bits (29), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactcc 463 |||||||||||| |||| |||||||| ||||| ||||||||||| Sbjct: 1004 tccaaagcatcagcaaaggccctgatggcatattgctcaactcc 961
>gb|AC141435.28| Medicago truncatula clone mth2-21i11, complete sequence Length = 132497 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 186 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 245 ||||||||||| || || | |||||||||||||| || || || ||||||||||| ||| Sbjct: 107610 ataacatcatcaatttttaatatcatcttgacaacttgagtagcaagcaagatctgttgc 107551 Query: 246 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 305 ||||| ||||||| ||| || || || || ||||| ||||||| ||||| ||||||||| Sbjct: 107550 tgctttccgatcaaagtttcaaagacgttttgctccctcatgtcattggtgccaacatca 107491 Query: 306 ttgcaatcgatgcca 320 |||||||| |||||| Sbjct: 107490 ttgcaatcaatgcca 107476 Score = 42.1 bits (21), Expect = 1.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgc 455 ||||||||||| ||||||| || |||||||||||| Sbjct: 107245 tccaaagcatccccaaatgctctaattgcatactgc 107210
>emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 on chromosome 3, complete sequence Length = 133240 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 186 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 245 ||||||||||| || || | |||||||||||||| || || || ||||||||||| ||| Sbjct: 96253 ataacatcatcaatttttaatatcatcttgacaacttgagtagcaagcaagatctgttgc 96312 Query: 246 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 305 ||||| ||||||| ||| || || || || ||||| ||||||| ||||| ||||||||| Sbjct: 96313 tgctttccgatcaaagtttcaaagacgttttgctccctcatgtcattggtgccaacatca 96372 Query: 306 ttgcaatcgatgcca 320 |||||||| |||||| Sbjct: 96373 ttgcaatcaatgcca 96387 Score = 42.1 bits (21), Expect = 1.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 420 tccaaagcatcancaaatgccctgattgcatactgc 455 ||||||||||| ||||||| || |||||||||||| Sbjct: 96618 tccaaagcatccccaaatgctctaattgcatactgc 96653
>emb|X85013.1|CSRNATCP1 C.sativus mRNA for T-complex polypeptide 1 Length = 2030 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 189 acatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgc 248 |||||||| ||||| || |||||||| || ||||| |||||||| || ||||| || ||| Sbjct: 1630 acatcatcaatcttcagaatcatcttcacgacctgagttgccagtaaaatctgttgttgc 1571 Query: 249 ttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattg 308 || ||||||| |||||| || || || ||||| ||||||| || || |||| ||||||| Sbjct: 1570 ttaccgatcaaagtctcaaatacgttttgctccctcatgtcatttgtgccaatatcattg 1511 Query: 309 caatcgatgccacagcgggaattgttctccttgacgtgttgagattttac 358 || || || ||||| | |||||||||||| | || ||||||||||| Sbjct: 1510 cagtcaattccacaataaggattgttctccttaatttgctgagattttac 1461 Score = 63.9 bits (32), Expect = 5e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||| ||||||| |||||||||| || |||||||||||||||||||| Sbjct: 1399 tccagagcatcagcaaatgccctaatagcatactgctcaactccagg 1353
>emb|CR734406.2|CNS0GTG5 Tetraodon nigroviridis full-length cDNA Length = 275 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 95 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 36 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 35 atcagggtctcga 23
>emb|CR734368.2|CNS0GTF3 Tetraodon nigroviridis full-length cDNA Length = 1888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1708 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1649 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 1648 atcagggtctcga 1636
>emb|CR704636.2|CNS0G6NC Tetraodon nigroviridis full-length cDNA Length = 1816 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1697 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1638 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 1637 atcagggtctcga 1625
>emb|CR702647.2|CNS0G543 Tetraodon nigroviridis full-length cDNA Length = 1848 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1676 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1617 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 1616 atcagggtctcga 1604
>emb|CR693702.2|CNS0FY7M Tetraodon nigroviridis full-length cDNA Length = 1102 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 918 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 859 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 858 atcagggtctcga 846
>emb|CR693121.2|CNS0FXRH Tetraodon nigroviridis full-length cDNA Length = 1851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1691 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1632 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 1631 atcagggtctcga 1619
>emb|CR692993.2|CNS0FXNX Tetraodon nigroviridis full-length cDNA Length = 1013 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 830 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 771 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 770 atcagggtctcga 758
>emb|CR682065.2|CNS0FP8D Tetraodon nigroviridis full-length cDNA Length = 1001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 824 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 765 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 764 atcagggtctcga 752
>emb|CR664385.2|CNS0FBLZ Tetraodon nigroviridis full-length cDNA Length = 1196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1013 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 954 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 953 atcagggtctcga 941
>emb|CR659491.2|CNS0F7U1 Tetraodon nigroviridis full-length cDNA Length = 1879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 254 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1703 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1644 Query: 255 atcagagtctcga 267 ||||| ||||||| Sbjct: 1643 atcagggtctcga 1631
>ref|XM_774923.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin containing TCP1, subunit 5 (epsilon), transcript variant 1 (LOC575808), mRNA Length = 2235 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 236 gatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggt 295 |||||| |||| |||||| ||||||||||| || |||| |||||| |||||||| ||||| Sbjct: 1650 gatctgttgcttcttgccaatcagagtctcaaacacatgctgctccttcatgtcattggt 1591
>ref|XM_796613.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin containing TCP1, subunit 5 (epsilon), transcript variant 2 (LOC575808), mRNA Length = 2250 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 236 gatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggt 295 |||||| |||| |||||| ||||||||||| || |||| |||||| |||||||| ||||| Sbjct: 1665 gatctgttgcttcttgccaatcagagtctcaaacacatgctgctccttcatgtcattggt 1606
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 15677 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 15618 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 412 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 15159 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 15116
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 22011133 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 22011074 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 412 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 22010615 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 22010572
>dbj|AK106739.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B02, full insert sequence Length = 1961 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 388 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 329 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 412 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 196 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 153
>dbj|AK070073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043F15, full insert sequence Length = 3156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 2027 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 1968 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 412 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 1835 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 1792
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 22022796 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 22022737 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 369 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 412 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 22022278 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 22022235
>emb|BX064596.1|CNS09M08 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC46DG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 345 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 399
>emb|BX059609.1|CNS09I5P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4CB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 544 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 490
>emb|BX058534.1|CNS09HBU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1000 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 384 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 438
>emb|BX058090.1|CNS09GZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC38BC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 862 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 416 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 470
>emb|BX047036.1|CNS098GG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21AB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 351 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 405
>emb|BX042897.1|CNS0959H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15AE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 686 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 358 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 412
>emb|BX037203.1|CNS090VB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9CC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 615 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 404 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 458
>emb|BX032800.1|CNS08XH0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48DF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 470 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 341 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 395
>emb|BX022454.1|CNS08PHM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA34BE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 896 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 360 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 414
>emb|BX025429.1|CNS08RS9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA39AA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 889 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 161 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 215
>emb|BX025374.1|CNS08RQQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA38DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 402 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 456
>emb|BX025373.1|CNS08RQP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1012 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 671 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 617
>emb|BX015203.1|CNS08JW7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA22DD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 329 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 383
>emb|BX013195.1|CNS08ICF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 985 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 347 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 401
>emb|BX010233.1|CNS08G25 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 670 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 616
>emb|BX009560.1|CNS08FJG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 325 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 379
>ref|XM_317219.2| Anopheles gambiae str. PEST ENSANGP00000012024 (ENSANGG00000009535), partial mRNA Length = 1779 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 1769 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 1715
>ref|XM_307323.1| Anopheles gambiae str. PEST ENSANGP00000001996 (ENSANGG00000001693), partial mRNA Length = 1515 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 1505 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 1451
>gb|AY398321.1| Danio rerio clone RK074A2D01 chaperonin containing TCP1, subunit 5 (epsilon) (CCT5) mRNA, complete cds Length = 1896 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1709 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1650 Query: 252 ccgatcagagtctcgaaaacattctgctctttcatgtc 289 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1649 ccgataagggtctcgattacatgctgctgcttcatgtc 1612
>gb|AY648807.1| Danio rerio TCP-1 epsilon mRNA, complete cds Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1684 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1625 Query: 252 ccgatcagagtctcgaaaacattctgctctttcatgtc 289 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1624 ccgataagggtctcgattacatgctgctgcttcatgtc 1587
>gb|BC068037.1| Danio rerio chaperonin containing TCP1, subunit 5 (epsilon), mRNA (cDNA clone MGC:77639 IMAGE:6996933), complete cds Length = 1879 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1694 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1635 Query: 252 ccgatcagagtctcgaaaacattctgctctttcatgtc 289 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1634 ccgataagggtctcgattacatgctgctgcttcatgtc 1597
>emb|BX469922.12| Zebrafish DNA sequence from clone DKEY-30N5 in linkage group 24, complete sequence Length = 200409 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 165976 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 166035 Query: 252 ccgatcagagtctcgaaaacattctgctctttcatgtc 289 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 166036 ccgataagggtctcgattacatgctgctgcttcatgtc 166073
>ref|NM_212613.1| Danio rerio chaperonin containing TCP1, subunit 5 (epsilon) (cct5), mRNA Length = 1896 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 251 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1709 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1650 Query: 252 ccgatcagagtctcgaaaacattctgctctttcatgtc 289 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1649 ccgataagggtctcgattacatgctgctgcttcatgtc 1612
>emb|BX010234.1|CNS08G26 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 685 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 194 atcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 407 atcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 459
>ref|XM_762836.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_549_7513_8304) partial mRNA Length = 792 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 234 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 593 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 635
>ref|XM_762838.1| Giardia lamblia ATCC 50803 chaperonin subunit epsilon (GLP_549_9744_8083) partial mRNA Length = 1662 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 234 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 1640 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 1598
>emb|BX024353.1|CNS08QYD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA37AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 608 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 246 |||||||||||||| ||||||||||| | ||| || || |||| | ||||||||| Sbjct: 339 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgttctgctgct 393
>gb|AF226724.1|AF226724 Giardia intestinalis chaperonin subunit epsilon CCTepsilon (Ccte) gene, complete cds Length = 1829 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 192 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 234 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 1730 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 1688
>emb|CR699738.2|CNS0G2VA Tetraodon nigroviridis full-length cDNA Length = 1834 Score = 44.1 bits (22), Expect = 0.43 Identities = 62/74 (83%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 195 tcgatcttgaggatcatct-tgacaacctgtgttgccagcaagatctgctgctgcttgcc 253 |||||||| |||||||||| |||| || || || || |||| ||| ||||||| ||||| Sbjct: 1669 tcgatcttaaggatcatctatgacgacttgggtggcgagcaggatttgctgctttttgcc 1610 Query: 254 gatcagagtctcga 267 |||||| ||||||| Sbjct: 1609 gatcagggtctcga 1596
>emb|AL031429.11|HS333A15 Human DNA sequence from clone RP3-333A15 on chromosome 1p31.1-31.3 Contains the 5' end of the PTGER3 gene for prostaglandin E receptor 3 (subtype EP3), part of a novel gene and a CpG island, complete sequence Length = 133221 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 gattgcatactgctcaactcca 464 |||||||||||||||||||||| Sbjct: 113672 gattgcatactgctcaactcca 113693
>emb|BX033735.1|CNS08Y6Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgac 217 |||||||||||||| ||||||||||| Sbjct: 330 tcatcgatcttgagaatcatcttgac 355
>emb|BX025983.1|CNS08S7N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4AC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 148 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 tcatcgatcttgaggatcatcttgac 217 |||||||||||||| ||||||||||| Sbjct: 79 tcatcgatcttgagaatcatcttgac 104
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccgatctgctgcagcgtcaa 489 ||||||||||||||||||||| Sbjct: 4299699 gccgatctgctgcagcgtcaa 4299679
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ttcatgtcgttggtaccaaca 302 ||||||||||||||||||||| Sbjct: 4018074 ttcatgtcgttggtaccaaca 4018094
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccgatctgctgcagcgtcaa 489 ||||||||||||||||||||| Sbjct: 140644 gccgatctgctgcagcgtcaa 140624
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccgatctgctgcagcgtcaa 489 ||||||||||||||||||||| Sbjct: 176649 gccgatctgctgcagcgtcaa 176629
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctgctgctgcttgccgatcag 259 ||||||||||||||||||||| Sbjct: 31442963 ctgctgctgcttgccgatcag 31442983
>gb|AC092660.2| Homo sapiens BAC clone RP11-502A5 from 2, complete sequence Length = 154704 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tgttgccagcaagatctgctg 244 ||||||||||||||||||||| Sbjct: 104641 tgttgccagcaagatctgctg 104621
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctgctgctgcttgccgatcag 259 ||||||||||||||||||||| Sbjct: 78360 ctgctgctgcttgccgatcag 78380
>gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from clone y409 Length = 41321 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 gccgatctgctgcagcgtcaa 489 ||||||||||||||||||||| Sbjct: 10824 gccgatctgctgcagcgtcaa 10844
>ref|NM_102295.3| Arabidopsis thaliana ATP binding / protein binding AT1G24510 transcript variant AT1G24510.1 mRNA, complete cds Length = 1906 Score = 40.1 bits (20), Expect = 6.7 Identities = 40/47 (85%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| || |||| ||||| |||||||||||||| || ||||| Sbjct: 1459 tccaaagcttctgcaaacgccctaattgcatactgctccacgccagg 1413
>ref|NM_202178.1| Arabidopsis thaliana ATP binding / protein binding AT1G24510 transcript variant AT1G24510.2 mRNA, complete cds Length = 2157 Score = 40.1 bits (20), Expect = 6.7 Identities = 40/47 (85%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| || |||| ||||| |||||||||||||| || ||||| Sbjct: 1710 tccaaagcttctgcaaacgccctaattgcatactgctccacgccagg 1664
>gb|AY377120.1| Liparthrum semidegener isolate sem-Madeira elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377081.1| Liparthrum canum isolate can-LaGomera elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 885 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377073.1| Liparthrum artemisiae isolate art-Tenerife elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377072.1| Liparthrum artemisiae isolate art-LaGomera elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377067.1| Liparthrum bartschti elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 474 gaatggcatccaaagcatca 455
>gb|DQ141315.1| Xyleborus amputatus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 716 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 592 gaatggcatccaaagcatca 573
>emb|AL590138.7| Human DNA sequence from clone RP11-243A2 on chromosome 1 Contains part of the PLXNA2 gene for plexin A2, complete sequence Length = 164057 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ccagcaagatctgctgctgcttgc 252 ||||||| |||||||||||||||| Sbjct: 116407 ccagcaacatctgctgctgcttgc 116430
>gb|AY131133.1| Diocalandra frumenti elongation factor 1-alpha gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 538 gaatggcatccaaagcatca 519
>gb|AF508886.1| Xylosandrus sp. nov (cf. ursa) elongation factor 1-alpha (EF-1a) gene, partial cds Length = 949 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 555 gaatggcatccaaagcatca 536
>gb|AF508882.1| Webbia cf. platypoides elongation factor 1-alpha (EF-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 539 gaatggcatccaaagcatca 520
>gb|AF508869.1| Ambrosiodmus compressus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 863 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 497 gaatggcatccaaagcatca 478
>gb|BT000818.1| Arabidopsis thaliana T-complex chaperonin protein , epsilon subunit (At1g24510/F21J9_150) mRNA, complete cds Length = 1608 Score = 40.1 bits (20), Expect = 6.7 Identities = 40/47 (85%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| || |||| ||||| |||||||||||||| || ||||| Sbjct: 1355 tccaaagcttctgcaaacgccctaattgcatactgctccacgccagg 1309
>emb|AJ851489.1| Gallus gallus mRNA for hypothetical protein, clone 3n20 Length = 1819 Score = 40.1 bits (20), Expect = 6.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactg 454 ||||| ||||| |||||||||| ||||||||||| Sbjct: 1399 tccaaggcatctgcaaatgccctcattgcatactg 1365
>gb|AF444076.1| Coccotrypes advena isolate Dry20 elongation factor 1-alpha (EF-1a) gene, partial cds Length = 937 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 556 gaatggcatccaaagcatca 537
>gb|AF444074.1| Coccotrypes cyperi elongation factor 1-alpha (EF-1a) gene, partial cds Length = 945 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 555 gaatggcatccaaagcatca 536
>gb|AF444071.1| Coccotrypes cf. rhizophorae elongation factor 1-alpha (EF-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 534 gaatggcatccaaagcatca 515
>gb|AF439740.1| Ozopemon uniseriatus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 912 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 535 gaatggcatccaaagcatca 516
>gb|AF308414.1| Liparthrum nigrescens elongation factor 1 alpha (ef-1a) gene, partial cds Length = 955 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 532 gaatggcatccaaagcatca 513
>gb|AF308412.1| Hylesinopsis sp. HLH11 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 910 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 551 gaatggcatccaaagcatca 532
>gb|AF308411.1| Alniphagus aspericollis elongation factor 1 alpha (ef-1a) gene, partial cds Length = 746 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 412 gaatggcatccaaagcatca 393
>gb|AF186693.2| Xylosandrus mancus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 921 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF186675.1| Ips perturbatus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 914 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186673.1| Pityokteines minutus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 913 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186671.1| Araptus sp. SCH05 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 909 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186661.2| Dryocoetes affaber elongation factor 1 alpha (ef-1a) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 535 gaatggcatccaaagcatca 516
>gb|AF186660.2| Dryoxylon onoharaensum elongation factor 1 alpha (ef-1a) gene, partial cds Length = 754 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 514 gaatggcatccaaagcatca 495
>gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 map PR1, complete sequence Length = 96095 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 agatctgctgctgcttgccgatca 258 ||||||||||||||| |||||||| Sbjct: 27576 agatctgctgctgctcgccgatca 27553
>gb|AC006437.5| Arabidopsis thaliana chromosome 2 clone T19K21 map mi421, complete sequence Length = 76713 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 agatctgctgctgcttgccgatca 258 ||||||||||||||| |||||||| Sbjct: 71220 agatctgctgctgctcgccgatca 71197
>gb|AF397647.1| Pityokteines sparsus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397640.1| Ips woodi elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397638.1| Ips tridens elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397636.1| Ips pini elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397635.1| Ips pilifrons elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397634.1| Ips plastographus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397633.1| Ips perturbatus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397632.1| Ips perroti elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397631.1| Ips paraconfusus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397630.1| Ips montanus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397629.1| Ips lecontei elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397627.1| Ips integer elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397626.1| Ips hunteri elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397624.1| Ips grandicollis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397621.1| Ips cribricollis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397620.1| Ips confusus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397619.1| Ips cembrae elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397618.1| Ips calligraphus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397617.1| Ips borealis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397615.1| Ips avulsus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397614.1| Ips apache elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397613.1| Ips amitinus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 420 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 228 gaatggcatccaaagcatca 209
>gb|AF397612.1| Ips acuminatus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AY075611.1| Arabidopsis thaliana At1g24510/F21J9_150 mRNA, complete cds Length = 1885 Score = 40.1 bits (20), Expect = 6.7 Identities = 40/47 (85%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| || |||| ||||| |||||||||||||| || ||||| Sbjct: 1459 tccaaagcttctgcaaacgccctaattgcatactgctccacgccagg 1413
>gb|AF259884.1| Webbia bicornis elongation factor 1 alpha (ef-1a) gene, partial cds Length = 915 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF259882.1| Webbia quattuordecimspinatus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 862 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259877.1| Ambrosiodmus aegir elongation factor 1 alpha (ef-1a) gene, partial cds Length = 931 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259875.1| Coccotrypes medius elongation factor 1 alpha (ef-1a) gene, partial cds Length = 885 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 502 gaatggcatccaaagcatca 483
>gb|AF259873.1| Dryocoetes autographus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 508 gaatggcatccaaagcatca 489
>gb|AF259871.1| Coccotrypes longior elongation factor 1 alpha (ef-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 538 gaatggcatccaaagcatca 519
>gb|AF259870.1| Ozopemon brownei elongation factor 1 alpha (ef-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259868.1| Coccotrypes advena elongation factor 1 alpha (ef-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259867.1| Coccotrypes gedeanus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 925 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF308432.1| Scolytodes parvulus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 962 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF308428.1| Dendroctonus ponderosae elongation factor 1 alpha (ef-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 553 gaatggcatccaaagcatca 534
>gb|AF308427.1| Dendroctonus murrayanae elongation factor 1 alpha (ef-1a) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AF308425.1| Dendroctonus jeffreyi elongation factor 1 alpha (ef-1a) gene, partial cds Length = 944 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 556 gaatggcatccaaagcatca 537
>gb|AF308423.1| Dendroctonus adjunctus isolate hlt12 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 925 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 547 gaatggcatccaaagcatca 528
>gb|AF308401.1| Hylesinopsis sp. HLD02 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 927 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF375274.1| Gnathotrupes sp. SCL07 elongation factor-1 alpha (ef-1a) gene, partial cds Length = 1004 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 579 gaatggcatccaaagcatca 560
>gb|AF375273.1| Gnathotrupes sp. SCL06 elongation factor-1 alpha (ef-1a) gene, partial cds Length = 1029 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 553 gaatggcatccaaagcatca 534
>gb|AF375264.1| Stenancylus sp. COR01 elongation factor 1-alpha (ef1a) gene, partial cds Length = 693 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 568 gaatggcatccaaagcatca 549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 attttacgacggtgagagta 371 |||||||||||||||||||| Sbjct: 610014 attttacgacggtgagagta 610033
>emb|BX815337.1|CNS0AAT9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2067 Score = 40.1 bits (20), Expect = 6.7 Identities = 40/47 (85%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactgctcaactccagg 466 |||||||| || |||| ||||| |||||||||||||| || ||||| Sbjct: 1714 tccaaagcttctgcaaacgccctaattgcatactgctccacgccagg 1668
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 ggatgccgatctgctgcagcgtca 488 ||||||||||||||||| |||||| Sbjct: 3752709 ggatgccgatctgctgccgcgtca 3752686
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 attttacgacggtgagagta 371 |||||||||||||||||||| Sbjct: 84619 attttacgacggtgagagta 84638
>gb|AY500988.1| Coleobothrus luridus voucher Co12lurT elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500987.1| Coleobothrus luridus voucher Co11lurLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500986.1| Coleobothrus luridus voucher Co10lurLG elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500985.1| Coleobothrus luridus voucher Co09lurGC elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500982.1| Cisurgus wollastoni voucher Ci11wolLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500981.1| Cisurgus wollastoni voucher Ci09wolEH elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500980.1| Cisurgus occidentalis voucher Ci07occMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 901 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500977.1| Cisurgus wollastoni voucher Ci01wolT elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500952.1| Aphanarthrum canariense voucher A61carLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 901 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500926.1| Aphanarthrum mairei voucher A29maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500925.1| Aphanarthrum mairei voucher A28maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500922.1| Aphanarthrum mairei voucher A25maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500920.1| Aphanarthrum canariense voucher A23carLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 917 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gaatggcatccaaagcatca 431 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>ref|NM_001012563.1| Gallus gallus chaperonin containing TCP1, subunit 5 (epsilon) (CCT5), mRNA Length = 1819 Score = 40.1 bits (20), Expect = 6.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 420 tccaaagcatcancaaatgccctgattgcatactg 454 ||||| ||||| |||||||||| ||||||||||| Sbjct: 1399 tccaaggcatctgcaaatgccctcattgcatactg 1365
>dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-667I23, complete sequence Length = 189892 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 taacacaataaatgtgcacc 113 |||||||||||||||||||| Sbjct: 100507 taacacaataaatgtgcacc 100488
>dbj|AP002853.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-46K15, complete sequence Length = 177463 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 taacacaataaatgtgcacc 113 |||||||||||||||||||| Sbjct: 18067 taacacaataaatgtgcacc 18048
>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence Length = 201839 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 taacacaataaatgtgcacc 113 |||||||||||||||||||| Sbjct: 111526 taacacaataaatgtgcacc 111545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,162,906 Number of Sequences: 3902068 Number of extensions: 4162906 Number of successful extensions: 67082 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 66717 Number of HSP's gapped (non-prelim): 364 length of query: 498 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 476 effective length of database: 17,147,199,772 effective search space: 8162067091472 effective search space used: 8162067091472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
