ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10j11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 33 0.55
2ACSA_AGRT5 (Q8UBV5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A... 32 1.6
3GIDA_MESFL (Q6F0E6) tRNA uridine 5-carboxymethylaminomethyl modi... 32 1.6
4CYB_STRCA (O03548) Cytochrome b 32 1.6
5BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12 32 2.1
6SAS4_CAEBR (Q60JJ0) Spindle assembly abnormal protein 4 31 3.6
7CYB_PARRB (Q35621) Cytochrome b 30 4.7
8CYB_PARRA (Q37078) Cytochrome b 30 4.7
9CYB_PARMI (Q35516) Cytochrome b 30 4.7
10CYB_HERCA (O21175) Cytochrome b 30 4.7
11PR2_DROME (Q9I7F7) Tyrosine-protein kinase PR2 (EC 2.7.10.2) 30 6.1
12CYB_SELME (Q35877) Cytochrome b 30 8.0
13CYB_PARRU (Q35618) Cytochrome b 30 8.0
14CYB_FALFE (O21163) Cytochrome b 30 8.0
15CYB_EPIAL (P29636) Cytochrome b 30 8.0
16CYB_ASIFL (Q9ZZE4) Cytochrome b 30 8.0

>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I)
          Length = 219

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 567 YCSWFTTYETDEEYLKYFEEISKRIKWIKRYMEFE 463
           + SWF TYET   + K  EE  K + W+KR ME E
Sbjct: 160 FSSWFYTYETYGNF-KMEEECPKLMAWVKRCMERE 193



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>ACSA_AGRT5 (Q8UBV5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 651

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -2

Query: 612 VLKNGDGTRYLDWEKYCSWFTTYETDEEYLKYFEEISKRIKWIKRYMEFEGGS 454
           VLK+      +D E+Y  W+   E+ E+  K++++  +RI W K Y + +  S
Sbjct: 8   VLKSAKARTLIDNERYQKWY--QESVEDPEKFWDKHGRRIDWFKPYTKVKNTS 58



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>GIDA_MESFL (Q6F0E6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 626

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/109 (26%), Positives = 41/109 (37%)
 Frame = -2

Query: 621 HRLVLKNGDGTRYLDWEKYCSWFTTYETDEEYLKYFEEISKRIKWIKRYMEFEGGSPEWI 442
           HRL+L+N +    L  + Y           EYLKY EEI+  IK                
Sbjct: 434 HRLLLRNDNAEHRLKEKGYEIGLIKQAEYNEYLKYTEEINNAIK---------------- 477

Query: 441 SMEAIGFRQAVEIAVDFPHMSYDLVFTAYMDLQATCIPI*DPEGWIVVI 295
            +E I F    E+A+    +    +   Y  ++   IP  D E  I  I
Sbjct: 478 ELEEIRFTPKSELAIKLKELGQADLSHGYSGIEILKIPTVDIEVMIPYI 526



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>CYB_STRCA (O03548) Cytochrome b|
          Length = 379

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL   S +  +TF PL  L ++F V  +L + ++GS+P
Sbjct: 306 PLLHKSKQRSMTFRPLSQLLFWFLVANLLILTWIGSQP 343



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>BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12|
          Length = 1151

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/73 (30%), Positives = 38/73 (52%)
 Frame = -3

Query: 629 VTTTALSLKMEMARGTLIGRSTAHGLLPTKQMKSISSTLKKYQRESSGLNVTWNSKEDLL 450
           ++T++ S +M  A  +   RS   GLL T  ++   +T +K Q +SSG     NS+   L
Sbjct: 766 LSTSSPSRRMNEAADSRDCRSP--GLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFL 823

Query: 449 SG*VWKL*DFGKQ 411
           +  +W + D  +Q
Sbjct: 824 NSALWDVWDGEEQ 836



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>SAS4_CAEBR (Q60JJ0) Spindle assembly abnormal protein 4|
          Length = 761

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 621 HRLVLKNGDGTRYLDWEKYCSWFTTYETDEEYLKYFEEISK 499
           H L+L+  D   +LD+   C W T  + +E Y K  +E+ +
Sbjct: 302 HNLMLQLRDTIAHLDYASECVWSTRKKQEEAYAKRMKELEE 342



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>CYB_PARRB (Q35621) Cytochrome b|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V ++L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTDLLILTWVGSQP 343



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>CYB_PARRA (Q37078) Cytochrome b|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V ++L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTDLLILTWVGSQP 343



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>CYB_PARMI (Q35516) Cytochrome b|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V ++L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTDLLILTWVGSQP 343



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>CYB_HERCA (O21175) Cytochrome b|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           P    S +  +TF PL  L ++F V  +L + +VGS+P
Sbjct: 306 PFLHKSKQRTMTFRPLSQLLFWFLVANLLILTWVGSQP 343



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>PR2_DROME (Q9I7F7) Tyrosine-protein kinase PR2 (EC 2.7.10.2)|
          Length = 1337

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 620 TALSLKMEMARGTLIGRSTAHGLLPTKQMKSISSTLK 510
           T +S K+    G   G    HGLLPT   K  S T+K
Sbjct: 704 TEMSAKLGQKSGDTNGNKHGHGLLPTLSKKKSSGTVK 740



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>CYB_SELME (Q35877) Cytochrome b|
          Length = 380

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V  +L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTNLLILTWVGSQP 343



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>CYB_PARRU (Q35618) Cytochrome b|
          Length = 380

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V  +L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTNLLILTWVGSQP 343



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>CYB_FALFE (O21163) Cytochrome b|
          Length = 380

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL   S +  +TF PL  L ++  V  +L + +VGS+P
Sbjct: 306 PLLHKSKQRTMTFRPLSQLLFWLLVTNLLILTWVGSQP 343



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>CYB_EPIAL (P29636) Cytochrome b|
          Length = 380

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL  +S +  +TF PL  + ++  V  +L + +VGS+P
Sbjct: 306 PLLHTSKQRSMTFRPLSQILFWILVTNLLILTWVGSQP 343



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>CYB_ASIFL (Q9ZZE4) Cytochrome b|
          Length = 380

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 445 PLRRSSFEFHVTFNPLDSL*YFFKVLEILFICFVGSKP 558
           PL   S +  +TF PL  L ++  V  +L + +VGS+P
Sbjct: 306 PLLHKSKQRTMTFRPLSQLIFWILVANLLILTWVGSQP 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,881,945
Number of Sequences: 219361
Number of extensions: 2068657
Number of successful extensions: 5526
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5526
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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