ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags10i07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108128.1| Zea mays PCO082816 mRNA sequence Length = 876 Score = 85.7 bits (43), Expect = 2e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 551 tcagtcgaccacctcctccgtcttcttgggcttcgacaggaggtaccagcccagggcgct 610 |||||| || |||||||||| |||||| ||||| |||| || ||||| |||||| | || Sbjct: 501 tcagtccacaacctcctccgacttcttaggctttgacaatagataccaacccaggccact 442 Query: 611 cagcccggcaatggtgcctgccagcaccgcgtagttcctgttcttgtcggt 661 ||| | ||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 441 cagagcagcaattgtgcctgccaggacagcgtagttcctgttcttgtcggt 391
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 609 ctcagcccggcaatggtgcctgc 631 ||||||||||||||||||||||| Sbjct: 472684 ctcagcccggcaatggtgcctgc 472706
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 609 ctcagcccggcaatggtgcctgc 631 ||||||||||||||||||||||| Sbjct: 472497 ctcagcccggcaatggtgcctgc 472519
>ref|XM_649632.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (46.t00051) partial mRNA Length = 816 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 504 gtcatgtgcagcaaggaagtaaa 526 ||||||||||||||||||||||| Sbjct: 7 gtcatgtgcagcaaggaagtaaa 29
>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3 Contains STSs and GSSs, complete sequence Length = 172747 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 250 aaagaatccacatcaggaaacca 272 ||||||||||||||||||||||| Sbjct: 113387 aaagaatccacatcaggaaacca 113365
>ref|XM_633198.1| Dictyostelium discoideum hypothetical protein (DDB0218699), partial mRNA Length = 5757 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 3746 ttattatcatcatcatcgtcat 3725
>ref|XM_636566.1| Dictyostelium discoideum hypothetical protein (DDB0205799), partial mRNA Length = 1725 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 767 ttattatcatcatcatcgtcat 746
>gb|AE001419.2| Plasmodium falciparum 3D7 chromosome 2 section 56 of 73 of the complete sequence Length = 16882 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 9953 ttattatcatcatcatcgtcat 9974
>emb|BX936437.15| Zebrafish DNA sequence from clone DKEYP-96G2 in linkage group 14, complete sequence Length = 103928 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 9815 ttattatcatcatcatcgtcat 9836
>ref|XM_449405.1| Candida glabrata CBS138 hypothetical protein (CAGL0M01386g) partial mRNA Length = 4284 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 413 ttattatcatcatcatcgtcat 392
>ref|XM_807386.1| Trypanosoma cruzi strain CL Brener ATP-dependent RNA helicase (Tc00.1047053507601.140) partial mRNA Length = 2547 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 1733 ttattatcatcatcatcgtcat 1712
>ref|XM_724431.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01725) partial mRNA Length = 4647 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 3896 ttattatcatcatcatcgtcat 3875
>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21, complete sequence Length = 164899 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 75469 ttattatcatcatcatcgtcat 75490
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 155464 ttattatcatcatcatcgtcat 155443
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ataacaaagaatcacaaacact 211 |||||||||||||||||||||| Sbjct: 23906 ataacaaagaatcacaaacact 23885
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 125074 ttattatcatcatcatcgtcat 125053
>emb|AL645766.5| Mouse DNA sequence from clone RP23-41B10 on chromosome 2 Contains a novel gene C330008G21Rik, complete sequence Length = 73575 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 tctttaaccaccatcacagcat 353 |||||||||||||||||||||| Sbjct: 25476 tctttaaccaccatcacagcat 25455
>emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in linkage group 19, complete sequence Length = 147881 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 23612 ttattatcatcatcatcgtcat 23633
>dbj|AB180090.1| Nestor meridionalis DNA, microsatellite locus Nmed 17 Length = 485 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 232 ttattatcatcatcatcgtcat 211
>ref|XM_625691.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_900), partial mRNA Length = 3129 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 1424 ttattatcatcatcatcgtcat 1403
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ataacaaagaatcacaaacact 211 |||||||||||||||||||||| Sbjct: 21501817 ataacaaagaatcacaaacact 21501796
>gb|M15510.1|SCMMEGC Schistosoma mansoni major egg antigen p40 mRNA, partial cds Length = 296 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 238 ttattatcatcatcatcgtcat 217
>gb|AC102761.12| Mus musculus chromosome 8, clone RP24-227E21, complete sequence Length = 162108 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 158854 ttattatcatcatcatcgtcat 158833
>ref|XM_308264.2| Anopheles gambiae str. PEST ENSANGP00000010835 (ENSANGG00000008346), partial mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtgcagcaa 517 |||||||||||| ||||||||||||| Sbjct: 326 atcatcatcatcatcatgtgcagcaa 351
>emb|BX649568.15| Zebrafish DNA sequence from clone CH211-122A20 in linkage group 18, complete sequence Length = 194885 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 120394 ttattatcatcatcatcgtcat 120373
>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19, complete sequence Length = 255824 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 192478 ttattatcatcatcatcgtcat 192499
>gb|AC103378.21| Mus musculus chromosome 8, clone RP24-231N10, complete sequence Length = 191479 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 16117 ttattatcatcatcatcgtcat 16096
>emb|AL772349.5| Mouse DNA sequence from clone RP23-466A17 on chromosome 4, complete sequence Length = 196489 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtcat 508 |||||||||||||||||||||| Sbjct: 14619 ttattatcatcatcatcgtcat 14598
>ref|XM_631712.1| Dictyostelium discoideum putative countin receptor Cnr13 (DDB0229880), partial mRNA Length = 4920 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 4675 tattatcatcatcatcgtcat 4655
>ref|XM_638369.1| Dictyostelium discoideum hypothetical protein (DDB0167350), partial mRNA Length = 945 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtca 507 ||||||||||||||||||||| Sbjct: 851 ttattatcatcatcatcgtca 831
>ref|XM_629948.1| Dictyostelium discoideum hypothetical protein (DDB0191602), partial mRNA Length = 2850 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 184 tattatcatcatcatcgtcat 164
>gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence Length = 260929 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtca 507 ||||||||||||||||||||| Sbjct: 3542 ttattatcatcatcatcgtca 3522
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence Length = 163517 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ataatccaaaatgccttcttt 330 ||||||||||||||||||||| Sbjct: 87288 ataatccaaaatgccttcttt 87308
>ref|XM_713897.1| Candida albicans SC5314 hypothetical protein (CaO19_6028), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 2152 tattatcatcatcatcgtcat 2132
>ref|XM_713795.1| Candida albicans SC5314 hypothetical protein (CaO19_13449), mRNA Length = 2358 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 2152 tattatcatcatcatcgtcat 2132
>gb|AC068760.12| Homo sapiens 3 BAC RP11-420J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193208 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 agtctcagattctcagaaagc 445 ||||||||||||||||||||| Sbjct: 138307 agtctcagattctcagaaagc 138287
>emb|CR450824.9| Zebrafish DNA sequence from clone CH211-147F12 in linkage group 23, complete sequence Length = 170611 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 50523 tattatcatcatcatcgtcat 50503
>ref|XM_721779.1| Plasmodium yoelii yoelii str. 17XNL reticulocyte binding protein (PY00074) partial mRNA Length = 6624 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtca 507 ||||||||||||||||||||| Sbjct: 5942 ttattatcatcatcatcgtca 5922
>emb|AL512652.18| Human DNA sequence from clone RP11-261P13 on chromosome 13 Contains the 3' end of the IL17D gene for interleukin 17, a vovel gene, a RAN, member RAS oncogene family (RAN) pseudogene, the 3' end of the gene for likely ortholog of mouse exportin 4 (XPO4) and 2 CpG islands, complete sequence Length = 135110 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 97128 tattatcatcatcatcgtcat 97108
>emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chromosome 10 Contains a histone deacetylase 1 (HD1, RPD3, RPD3L1) (HDAC1) pseudogene, part of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516) and a novel gene, complete sequence Length = 101767 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 54071 tattatcatcatcatcgtcat 54091
>emb|AL390121.6| Human DNA sequence from clone RP11-147C23 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 150396 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 66680 tattatcatcatcatcgtcat 66700
>emb|BX664750.15| Zebrafish DNA sequence from clone DKEY-236A14 in linkage group 2, complete sequence Length = 111698 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 75152 tattatcatcatcatcgtcat 75172
>emb|AL645843.14| Mouse DNA sequence from clone RP23-338K15 on chromosome 11 Contains a eukaryotic translation elongation factor 2 (Eef2) pseudogene, complete sequence Length = 141245 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 aacatagtgttatatatcaca 143 ||||||||||||||||||||| Sbjct: 6660 aacatagtgttatatatcaca 6680
>emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in linkage group 25, complete sequence Length = 182806 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 76342 tattatcatcatcatcgtcat 76362
>emb|BX323077.15| Zebrafish DNA sequence from clone DKEYP-110E4 in linkage group 14, complete sequence Length = 195732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 162036 tattatcatcatcatcgtcat 162056
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gttgcatcatgcaaggtcatcagca 101 ||||||||| ||||||||||||||| Sbjct: 343752 gttgcatcaggcaaggtcatcagca 343728
>gb|AF291424.1|AF291424 Vibrio vulnificus phospholipase Vpl (vpl) gene, complete cds Length = 1440 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gttgcatcatgcaaggtcatcagca 101 ||||||||| ||||||||||||||| Sbjct: 968 gttgcatcaggcaaggtcatcagca 944
>emb|BX255960.14| Zebrafish DNA sequence from clone DKEY-265E17 in linkage group 23, complete sequence Length = 172219 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 150328 tattatcatcatcatcgtcat 150348
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone BACR03B07, complete sequence Length = 170089 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ataatccaaaatgccttcttt 330 ||||||||||||||||||||| Sbjct: 9339 ataatccaaaatgccttcttt 9359
>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence Length = 182870 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtca 507 ||||||||||||||||||||| Sbjct: 145977 ttattatcatcatcatcgtca 145957
>emb|AL935305.13| Zebrafish DNA sequence from clone CH211-226I4 in linkage group 23, complete sequence Length = 190222 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 156853 tattatcatcatcatcgtcat 156833
>emb|AL954822.8| Zebrafish DNA sequence from clone CH211-222M15 in linkage group 15, complete sequence Length = 219495 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tattatcatcatcatcgtcat 508 ||||||||||||||||||||| Sbjct: 65851 tattatcatcatcatcgtcat 65871
>emb|BX936364.6| Zebrafish DNA sequence from clone CH211-247G11 in linkage group 18, complete sequence Length = 146733 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtca 507 ||||||||||||||||||||| Sbjct: 117772 ttattatcatcatcatcgtca 117752
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ataatccaaaatgccttcttt 330 ||||||||||||||||||||| Sbjct: 282390 ataatccaaaatgccttcttt 282410
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gttgcatcatgcaaggtcatcagca 101 ||||||||| ||||||||||||||| Sbjct: 1619751 gttgcatcaggcaaggtcatcagca 1619727
>ref|NM_106744.3| Arabidopsis thaliana unknown protein AT1G80960 transcript variant AT1G80960.1 mRNA, complete cds Length = 1610 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 96 atcatcatcatcgtcatgtg 115
>ref|NM_202466.1| Arabidopsis thaliana unknown protein AT1G80960 transcript variant AT1G80960.3 mRNA, complete cds Length = 1598 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 156 atcatcatcatcgtcatgtg 175
>ref|NM_202465.1| Arabidopsis thaliana unknown protein AT1G80960 transcript variant AT1G80960.2 mRNA, complete cds Length = 1702 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 156 atcatcatcatcgtcatgtg 175
>ref|XM_633442.1| Dictyostelium discoideum hypothetical protein (DDB0218611), partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 455 ttattatcatcatcatcgtc 436
>ref|XM_641488.1| Dictyostelium discoideum hypothetical protein (DDB0190842), partial mRNA Length = 2670 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1416 attatcatcatcatcgtcat 1435
>ref|XM_641207.1| Dictyostelium discoideum hypothetical protein (DDB0190573), partial mRNA Length = 2115 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1890 attatcatcatcatcgtcat 1871
>ref|XM_641118.1| Dictyostelium discoideum hypothetical protein (DDB0216685), partial mRNA Length = 3339 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 875 ttattatcatcatcatcgtc 856
>ref|XM_638295.1| Dictyostelium discoideum hypothetical protein (DDB0217753), partial mRNA Length = 4479 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1896 attatcatcatcatcgtcat 1915
>ref|XM_635828.1| Dictyostelium discoideum hypothetical protein (DDB0204119), partial mRNA Length = 1704 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 420 attatcatcatcatcgtcat 439
>ref|XM_630306.1| Dictyostelium discoideum hypothetical protein (DDB0219645), partial mRNA Length = 3294 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 837 attatcatcatcatcgtcat 818
>ref|XM_630606.1| Dictyostelium discoideum putative protein tyrosine kinase (DDB0220436), partial mRNA Length = 2904 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 726 attatcatcatcatcgtcat 745
>ref|XM_629354.1| Dictyostelium discoideum hypothetical protein (DDB0219831), partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 201 attatcatcatcatcgtcat 182
>ref|XM_469577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 tcgaccacctcctccgtcttcttg 578 |||||| ||||||||||||||||| Sbjct: 1059 tcgacctcctcctccgtcttcttg 1036
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 68879 attatcatcatcatcgtcat 68860
>gb|AY431797.1| Aedes aegypti ASAP ID: 35807 unknown mRNA sequence Length = 523 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 152 attatcatcatcatcgtcat 133
>gb|AE001391.2| Plasmodium falciparum 3D7 chromosome 2 section 28 of 73 of the complete sequence Length = 14973 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 11967 attatcatcatcatcgtcat 11948
>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete sequence Length = 107190 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgccatcatagcaaaaacaa 397 |||||||||||||||||||| Sbjct: 82624 tgccatcatagcaaaaacaa 82643
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 36057 tcatcatcatcgtcatctgcagca 36034
>ref|XM_420272.1| PREDICTED: Gallus gallus similar to pregnancy-specific glycoprotein 21; pregnancy-specific glrcoprotein 21 (LOC422293), mRNA Length = 1511 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 tgcagcaaggaagtaaagcc 529 |||||||||||||||||||| Sbjct: 1040 tgcagcaaggaagtaaagcc 1021
>gb|BC012623.1| Homo sapiens breast carcinoma amplified sequence 2, mRNA (cDNA clone MGC:13667 IMAGE:4073772), complete cds Length = 1291 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1147 attatcatcatcatcgtcat 1166
>gb|BC039238.1| Homo sapiens breast carcinoma amplified sequence 2, mRNA (cDNA clone IMAGE:4688387), partial cds Length = 1303 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1145 attatcatcatcatcgtcat 1164
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 129407 attatcatcatcatcgtcat 129388
>gb|AY815931.1| Schistosoma japonicum SJCHGC02809 protein mRNA, complete cds Length = 1587 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1000 attatcatcatcatcgtcat 981
>gb|AY809954.1| Schistosoma japonicum SJCHGC05045 protein mRNA, partial cds Length = 1102 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 332 attatcatcatcatcgtcat 313
>gb|AC117082.2| Dictyostelium discoideum chromosome 2 map complement(6807709-6776860) strain AX4, complete sequence Length = 30849 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 10895 attatcatcatcatcgtcat 10876
>gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromosome ul, complete sequence Length = 252782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 atgtgcagcaaggaagtaaa 526 |||||||||||||||||||| Sbjct: 2668 atgtgcagcaaggaagtaaa 2687
>emb|BX001001.16| Zebrafish DNA sequence from clone CH211-262P15 in linkage group 18, complete sequence Length = 138944 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 76429 ttattatcatcatcatcgtc 76410
>gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete sequence Length = 274210 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 125006 attatcatcatcatcgtcat 124987
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence Length = 202340 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ccaaaatgccttctttctct 334 |||||||||||||||||||| Sbjct: 21624 ccaaaatgccttctttctct 21643
>gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome 7, complete sequence Length = 190840 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 98557 attatcatcatcatcgtcat 98538
>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 Length = 340000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 204377 atcatcatcatcgtcatgtg 204358
>ref|NM_005872.2| Homo sapiens breast carcinoma amplified sequence 2 (BCAS2), mRNA Length = 1310 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1174 attatcatcatcatcgtcat 1193
>emb|AL390241.19| Human DNA sequence from clone RP11-343L14 on chromosome 1 Contains the 3' end of a ribosomal protein L26 (RPL26) pseudogene, a eukaryotic translation initiation factor 2 subunit 2 beta 38kDa (EIF2S2) pseudogene, the 5' end of the TRIM33 gene for tripartite motif-containing 33, a pyruvate kinase muscle (PKM2) pseudogene, the BCAS2 gene for breast carcinoma amplified sequence 2, the 3' end of the gene for a novel protein (FLJ37099) and a CpG island, complete sequence Length = 123501 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 107506 attatcatcatcatcgtcat 107487
>gb|BT010303.1| Drosophila melanogaster LD04013 full insert cDNA Length = 3412 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 2250 tcatcatcatcgtcatctgcagca 2273
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 88274 attatcatcatcatcgtcat 88255
>emb|AL356098.10| Human DNA sequence from clone RP11-457L23 on chromosome 13 Contains an Alport syndrome mental retardation midface hypoplasia and elliptocytosis chromosomal region gene 1 (AMMECR1) pseudogene, complete sequence Length = 186305 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 157136 attatcatcatcatcgtcat 157155
>emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on chromosome 13 Contains the SPRY2 gene for sprouty homolog 2 (Drosophila) and a CpG island, complete sequence Length = 191652 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 15044 atcatcatcatcgtcatgtg 15063
>emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chromosome 6 Contains an actin beta (ACTB) pseudogene and part of a novel gene, complete sequence Length = 107745 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 41767 attatcatcatcatcgtcat 41786
>gb|AC117633.6| Mus musculus, clone RP23-200C8, complete sequence Length = 224221 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 118697 attatcatcatcatcgtcat 118716
>emb|AL022308.1|HS177G12 Human DNA sequence from clone RP6-177G12 on chromosome Xq21.1, complete sequence Length = 74639 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 aacttattatcatcatcatc 503 |||||||||||||||||||| Sbjct: 28298 aacttattatcatcatcatc 28317
>gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 acgcatttccacagacatcc 291 |||||||||||||||||||| Sbjct: 88122 acgcatttccacagacatcc 88141
>emb|BX649198.6| Zebrafish DNA sequence from clone DKEY-18L1 in linkage group 9, complete sequence Length = 139896 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 acttattatcatcatcatcgtcat 508 ||||||||||||||||||| |||| Sbjct: 137727 acttattatcatcatcatcatcat 137704
>gb|BC005285.1| Homo sapiens breast carcinoma amplified sequence 2, mRNA (cDNA clone MGC:12341 IMAGE:3930559), complete cds Length = 1296 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1143 attatcatcatcatcgtcat 1162
>emb|BX323461.27| Zebrafish DNA sequence from clone DKEYP-44B8 in linkage group 23, complete sequence Length = 169310 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 155192 atcatcatcatcgtcatgtg 155173
>emb|BX950191.7| Zebrafish DNA sequence from clone DKEY-88F24 in linkage group 18, complete sequence Length = 141551 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 62525 ttattatcatcatcatcgtc 62544
>gb|BC022880.1| Homo sapiens breast carcinoma amplified sequence 2, mRNA (cDNA clone MGC:27160 IMAGE:3930637), complete cds Length = 1323 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1156 attatcatcatcatcgtcat 1175
>gb|DQ424891.1| Citrus unshiu group 5 late embryogenesis abundant protein (LEA5) gene, complete cds Length = 3230 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 255 attatcatcatcatcgtcat 236
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence Length = 192282 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgccatcatagcaaaaacaa 397 |||||||||||||||||||| Sbjct: 142991 tgccatcatagcaaaaacaa 143010
>ref|NM_206760.1| Drosophila melanogaster Tob CG9214-RB, transcript variant B (Tob), mRNA Length = 2137 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 1731 tcatcatcatcgtcatctgcagca 1754
>ref|NM_132876.3| Drosophila melanogaster Tob CG9214-RA, transcript variant A (Tob), mRNA Length = 2742 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 2336 tcatcatcatcgtcatctgcagca 2359
>gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21q22.3, complete sequence Length = 170121 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 130969 atcatcatcatcgtcatgtg 130950
>gb|AC006749.1| Caenorhabditis elegans cosmid Y39D8B, complete sequence Length = 20303 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 cataggaaaacttattatcatcat 499 ||||| |||||||||||||||||| Sbjct: 7386 catagcaaaacttattatcatcat 7409
>gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, complete sequence Length = 175350 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 40914 attatcatcatcatcgtcat 40933
>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189286 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tataacaaagaatcacaaac 208 |||||||||||||||||||| Sbjct: 179344 tataacaaagaatcacaaac 179363
>ref|XM_679684.1| PREDICTED: Danio rerio similar to dystrobrevin binding protein 1 isoform a (LOC556784), mRNA Length = 813 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 513 attatcatcatcatcgtcat 494
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23, complete sequence Length = 261934 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtcatgt 510 ||||||||||||||||| |||||| Sbjct: 171860 ttattatcatcatcatcatcatgt 171883
>gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, region 97B2-97B9, BAC clone BACR48G23, complete sequence Length = 166543 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 catcatcatcgtcatgtgca 513 |||||||||||||||||||| Sbjct: 165374 catcatcatcgtcatgtgca 165355
>emb|BX247903.20| Zebrafish DNA sequence from clone CH211-112C12 in linkage group 18, complete sequence Length = 188859 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 161234 ttattatcatcatcatcgtc 161215
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 2104196 attatcatcatcatcgtcat 2104215
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 catgagtcatgacatttcta 76 |||||||||||||||||||| Sbjct: 2088798 catgagtcatgacatttcta 2088817
>emb|BX247887.6| Zebrafish DNA sequence from clone CH211-142L10, complete sequence Length = 143903 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 100448 ttattatcatcatcatcgtc 100467
>emb|BX816046.1|CNS0ABVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1609 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 96 atcatcatcatcgtcatgtg 115
>emb|BX815641.1|CNS0ABDX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS79ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1687 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 145 atcatcatcatcgtcatgtg 164
>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone BACR13P17, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 catcatcatcgtcatgtgca 513 |||||||||||||||||||| Sbjct: 24877 catcatcatcgtcatgtgca 24858
>dbj|AK222637.1| Homo sapiens mRNA for breast carcinoma amplified sequence 2 variant, clone: CBL04884 Length = 1294 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1151 attatcatcatcatcgtcat 1170
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 84747 ttattatcatcatcatcgtc 84766
>gb|AE014844.1| Plasmodium falciparum 3D7 chromosome 12, section 1 of 9 of the complete sequence Length = 251551 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 39338 attatcatcatcatcgtcat 39357
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 catgagtcatgacatttcta 76 |||||||||||||||||||| Sbjct: 109660 catgagtcatgacatttcta 109679
>dbj|AK174690.1| Ciona intestinalis cDNA, clone:cign048j23, full insert sequence Length = 1524 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ttatcatcatcatcgtcatg 509 |||||||||||||||||||| Sbjct: 513 ttatcatcatcatcgtcatg 494
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 29613 attatcatcatcatcgtcat 29632
>emb|BX001038.6| Zebrafish DNA sequence from clone CH211-12M10 in linkage group 17, complete sequence Length = 180659 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ttattatcatcatcatcgtc 506 |||||||||||||||||||| Sbjct: 110256 ttattatcatcatcatcgtc 110237
>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and rep genes Length = 9367 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 ggaggtaccagcccagggcg 608 |||||||||||||||||||| Sbjct: 3693 ggaggtaccagcccagggcg 3674
>dbj|AK108923.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H10, full insert sequence Length = 1671 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 tcgaccacctcctccgtcttcttg 578 |||||| ||||||||||||||||| Sbjct: 530 tcgacctcctcctccgtcttcttg 507
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 100065 atcatcatcatcgtcatgtg 100084
>gb|AF177464.1|AF177464 Drosophila melanogaster Tob homolog (Tob) mRNA, partial cds Length = 1759 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 1347 tcatcatcatcgtcatctgcagca 1370
>emb|BX842609.12| Zebrafish DNA sequence from clone CH211-285P6 in linkage group 19, complete sequence Length = 177481 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 16288 attatcatcatcatcgtcat 16307
>emb|CR388140.8| Zebrafish DNA sequence from clone CH211-190G11, complete sequence Length = 160541 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 145009 attatcatcatcatcgtcat 145028
>emb|AL954227.3|RP43002I19 Pan troglodytes chromosome 22 BAC RP43-002I19, complete sequence Length = 192219 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 127507 atcatcatcatcgtcatgtg 127488
>gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, complete sequence Length = 194546 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 176971 attatcatcatcatcgtcat 176990
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 catcatcatcgtcatgtgca 513 |||||||||||||||||||| Sbjct: 269134 catcatcatcgtcatgtgca 269115
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 tcatcatcatcgtcatgtgcagca 516 |||||||||||||||| ||||||| Sbjct: 71131 tcatcatcatcgtcatctgcagca 71108
>gb|AC110216.10| Mus musculus chromosome 18, clone RP24-502I6, complete sequence Length = 201138 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 27733 attatcatcatcatcgtcat 27752
>gb|U51330.1|TAU51330 Triticum aestivum leaf rust resistance kinase Lr10 (LRK10) gene, complete cds Length = 3878 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 atcatcatcatcgtcatgtg 511 |||||||||||||||||||| Sbjct: 789 atcatcatcatcgtcatgtg 808
>gb|DQ307174.1| Glossina morsitans morsitans clone TC1667 serine protease inhibitor 4 (Spn4) mRNA, complete cds Length = 1446 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 206 attatcatcatcatcgtcat 225
>gb|AC144936.4| Mus musculus BAC clone RP24-238C11 from 6, complete sequence Length = 174789 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 117836 attatcatcatcatcgtcat 117855
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC, Nv-ZicD, Nv-ZicE, complete cds Length = 177971 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 112044 attatcatcatcatcgtcat 112025 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 111990 attatcatcatcatcgtcat 111971
>emb|AL606933.4| Mouse DNA sequence from clone RP23-168M5 on chromosome 4, complete sequence Length = 197552 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 15698 attatcatcatcatcgtcat 15679
>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete sequence Length = 224038 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 65405 attatcatcatcatcgtcat 65386
>dbj|AB020623.1| Homo sapiens DAM1 mRNA, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 attatcatcatcatcgtcat 508 |||||||||||||||||||| Sbjct: 1169 attatcatcatcatcgtcat 1188 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,491,597 Number of Sequences: 3902068 Number of extensions: 7491597 Number of successful extensions: 160434 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159773 Number of HSP's gapped (non-prelim): 659 length of query: 687 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 664 effective length of database: 17,143,297,704 effective search space: 11383149675456 effective search space used: 11383149675456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
