ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10i01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187955.1| Oryza sativa (japonica cultivar-group), Ozsa837... 46 0.16
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
3dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
4dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
5dbj|AK102808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
6dbj|AK062259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
7dbj|AB028187.1| Oryza sativa mRNA for OsNAC8 protein, complete cds 46 0.16
8gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete s... 44 0.63
9gb|AC119418.5| Medicago truncatula clone mth1-23l16, complete se... 44 0.63
10ref|XM_794173.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.63
11gb|U53155.1| Caenorhabditis elegans cosmid ZC513, complete sequence 42 2.5
12emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chro... 42 2.5
13gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 ma... 42 2.5
14dbj|AK084083.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 2.5
15ref|NM_114781.3| Arabidopsis thaliana enzyme inhibitor/ pectines... 40 9.8
16ref|NM_128305.2| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTE... 40 9.8
17ref|NM_179770.1| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTE... 40 9.8
18gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome ... 40 9.8
19gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome ... 40 9.8
20gb|AC142497.3| Homo sapiens chromosome X clone RP11-959H17 map p... 40 9.8
21gb|AC142496.2| Homo sapiens chromosome X clone RP1-8N8 map p11.2... 40 9.8
22gb|AC097087.13| Rattus norvegicus BAC CH230-140P4 (Children's H... 40 9.8
23gb|AC122037.2| Mus musculus BAC clone RP24-426D9 from 3, complet... 40 9.8
24gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, comple... 40 9.8
25emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chro... 40 9.8
26ref|XM_783665.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.8
27gb|AY122963.1| Arabidopsis thaliana putative nitrilase (At2g2745... 40 9.8
28gb|AY072113.1| Arabidopsis thaliana putative nitrilase (At2g2745... 40 9.8
29emb|X55026.1|MTPACG Podospora anserina complete mitochondrial ge... 40 9.8
30emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.8
31gb|BT008355.1| Arabidopsis thaliana At3g49220 gene, complete cds 40 9.8
32emb|AL049279.1|HSM800064 Homo sapiens genomic DNA; cDNA DKFZp564... 40 9.8
33gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell P... 40 9.8
34gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-3... 40 9.8
35gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 ma... 40 9.8
36gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region 40 9.8
37gb|AC099757.2| Homo sapiens chromosome 1 clone RP11-523K4, compl... 40 9.8
38gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence 40 9.8
39gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, com... 40 9.8
40gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, com... 40 9.8
41gb|AC018422.9| Homo sapiens, clone RP11-19G4, complete sequence 40 9.8
42gb|AY059834.1| Arabidopsis thaliana pectinesterase-like protein ... 40 9.8
43gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, compl... 40 9.8
44gb|AC093545.1| Homo sapiens chromosome X clone RP5-1015P16A, com... 40 9.8
45emb|CR391515.1| Gallus gallus finished cDNA, clone ChEST761c7 40 9.8
46gb|AF325050.2|AF325050 Arabidopsis thaliana AT3g49220 (AT3g49220... 40 9.8
47gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Can... 40 9.8
48gb|AC012543.4|AC012543 Homo sapiens, clone RP11-1K11, complete s... 40 9.8
49gb|AC142495.2| Homo sapiens chromosome X clone LL0XNC01-31A6 map... 40 9.8
50emb|BX821518.1|CNS0AAAM Arabidopsis thaliana Full-length cDNA Co... 40 9.8
51emb|BX824538.1|CNS0A5R5 Arabidopsis thaliana Full-length cDNA Co... 40 9.8
52gb|AC154463.2| Mus musculus BAC clone RP24-144A20 from chromosom... 40 9.8
53gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 9.8
54gb|AY086056.1| Arabidopsis thaliana clone 20875 mRNA, complete s... 40 9.8
55gb|AF122955.1|AF122955 Globodera pallida microsatellite CL1 sequ... 40 9.8
56gb|AC157505.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 9.8
57gb|AC007486.1|AC007486 Homo sapiens clone DJ1015P16A, complete s... 40 9.8
58gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 9.8
59gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.8
60gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complet... 40 9.8
61gb|AC091069.2| Homo sapiens chromosome 3 clone RP11-161L3 map 3p... 40 9.8
62gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome... 40 9.8
63emb|AL672309.8| Mouse DNA sequence from clone RP23-466J17 on chr... 40 9.8 
>ref|NM_187955.1| Oryza sativa (japonica cultivar-group), Ozsa8375 predicted mRNA
          Length = 1470

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 681  aacttgatagtctgattgatggattcagagctgctcgta 719
            |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 1205 aacttgatagtctggttgatagattcagaactactcgta 1167
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 681     aacttgatagtctgattgatggattcagagctgctcgta 719
               |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 8792190 aacttgatagtctggttgatagattcagaactactcgta 8792228
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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 681    aacttgatagtctgattgatggattcagagctgctcgta 719
              |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 109647 aacttgatagtctggttgatagattcagaactactcgta 109685
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 681   aacttgatagtctgattgatggattcagagctgctcgta 719
             |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 28218 aacttgatagtctggttgatagattcagaactactcgta 28256
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>dbj|AK102808.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108J08, full
            insert sequence
          Length = 1998

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 681  aacttgatagtctgattgatggattcagagctgctcgta 719
            |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 1457 aacttgatagtctggttgatagattcagaactactcgta 1419
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>dbj|AK062259.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G11, full
           insert sequence
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 681 aacttgatagtctgattgatggattcagagctgctcgta 719
           |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 762 aacttgatagtctggttgatagattcagaactactcgta 724
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>dbj|AB028187.1| Oryza sativa mRNA for OsNAC8 protein, complete cds
          Length = 1942

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 681  aacttgatagtctgattgatggattcagagctgctcgta 719
            |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 1382 aacttgatagtctggttgatagattcagaactactcgta 1344
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>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence
          Length = 130044

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 147  ttttgttcttttctgtttggcactca 172
            |||||||||||||||||| |||||||
Sbjct: 2953 ttttgttcttttctgttttgcactca 2978



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   ttttgttcttttctgtttggcact 170
             |||||||||||||||||| |||||
Sbjct: 20070 ttttgttcttttctgttttgcact 20093
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>gb|AC119418.5| Medicago truncatula clone mth1-23l16, complete sequence
          Length = 112695

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 147   ttttgttcttttctgtttggcactca 172
             |||||||||||||||||| |||||||
Sbjct: 58249 ttttgttcttttctgttttgcactca 58274



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   ttttgttcttttctgtttggcact 170
             |||||||||||||||||| |||||
Sbjct: 75365 ttttgttcttttctgttttgcact 75388
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>ref|XM_794173.1| PREDICTED: Strongylocentrotus purpuratus similar to Aquaporin 4
           (WCH4) (Mercurial-insensitive water channel) (MIWC)
           (LOC594743), mRNA
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 147 ttttgttcttttctgtttggca 168
           ||||||||||||||||||||||
Sbjct: 412 ttttgttcttttctgtttggca 391
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>gb|U53155.1| Caenorhabditis elegans cosmid ZC513, complete sequence
          Length = 37581

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   cctgtgtttttgttcttttct 160
             |||||||||||||||||||||
Sbjct: 30063 cctgtgtttttgttcttttct 30043
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>emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chromosome 2, complete
             sequence
          Length = 163577

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 147   ttttgttcttttctgtttggcactc 171
             ||||||||| |||||||||||||||
Sbjct: 68296 ttttgttctgttctgtttggcactc 68272
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>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete
             sequence
          Length = 96685

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cagaatactgaatacgtataa 277
             |||||||||||||||||||||
Sbjct: 59248 cagaatactgaatacgtataa 59268
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>dbj|AK084083.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130084N16
           product:unclassifiable, full insert sequence
          Length = 1962

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 147 ttttgttcttttctgtttggcactc 171
           ||||||||| |||||||||||||||
Sbjct: 75  ttttgttctgttctgtttggcactc 99
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>ref|NM_114781.3| Arabidopsis thaliana enzyme inhibitor/ pectinesterase AT3G49220 mRNA,
            complete cds
          Length = 2045

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  gtgcgtagatgctacagatttgta 385
            ||||||||||||||||| ||||||
Sbjct: 1410 gtgcgtagatgctacagttttgta 1387
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>ref|NM_128305.2| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTEIN 1); hydrolase,
           acting on carbon-nitrogen (but not peptide) bonds
           AT2G27450 (NLP1) transcript variant AT2G27450.1 mRNA,
           complete cds
          Length = 1245

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 290 tgcttgacagaagtaatatc 271
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>ref|NM_179770.1| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTEIN 1); hydrolase,
           acting on carbon-nitrogen (but not peptide) bonds
           AT2G27450 (NLP1) transcript variant AT2G27450.2 mRNA,
           complete cds
          Length = 1236

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 279 tgcttgacagaagtaatatc 260
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>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence
          Length = 214638

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ataaagatgactccaagctg 73
             ||||||||||||||||||||
Sbjct: 58801 ataaagatgactccaagctg 58782
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>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence
          Length = 252639

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ataaagatgactccaagctg 73
              ||||||||||||||||||||
Sbjct: 106606 ataaagatgactccaagctg 106625
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>gb|AC142497.3| Homo sapiens chromosome X clone RP11-959H17 map p11.23, complete
             sequence
          Length = 147127

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ctagccagactgaccaaaaa 208
             ||||||||||||||||||||
Sbjct: 87073 ctagccagactgaccaaaaa 87054
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>gb|AC142496.2| Homo sapiens chromosome X clone RP1-8N8 map p11.23, complete sequence
          Length = 119525

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  ctagccagactgaccaaaaa 208
            ||||||||||||||||||||
Sbjct: 9789 ctagccagactgaccaaaaa 9770
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>gb|AC097087.13| Rattus norvegicus  BAC CH230-140P4 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 166595

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 326    ccactttaatcacagtgcctactg 349
              ||||||||||||||||| ||||||
Sbjct: 111922 ccactttaatcacagtgtctactg 111945
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>gb|AC122037.2| Mus musculus BAC clone RP24-426D9 from 3, complete sequence
          Length = 185938

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tttttgttcttttctgtttg 165
             ||||||||||||||||||||
Sbjct: 31302 tttttgttcttttctgtttg 31283
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>gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, complete sequence
          Length = 186290

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    tttttgttcttttctgtttg 165
              ||||||||||||||||||||
Sbjct: 161791 tttttgttcttttctgtttg 161772
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>emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chromosome 6, complete
             sequence
          Length = 171882

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    ttacataagtatccttagttaatt 46
             |||||| |||||||||||||||||
Sbjct: 13966 ttacatcagtatccttagttaatt 13943
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>ref|XM_783665.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10011-PA
           (LOC583771), partial mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 652 tgagatcaagatgaccattg 671
           ||||||||||||||||||||
Sbjct: 70  tgagatcaagatgaccattg 51
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>gb|AY122963.1| Arabidopsis thaliana putative nitrilase (At2g27450) mRNA, complete
           cds
          Length = 1012

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 258 tgcttgacagaagtaatatc 239
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>gb|AY072113.1| Arabidopsis thaliana putative nitrilase (At2g27450) mRNA, complete
           cds
          Length = 1253

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 279 tgcttgacagaagtaatatc 260
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>emb|X55026.1|MTPACG Podospora anserina complete mitochondrial genome
          Length = 100314

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    taatttacataagtatcctt 38
             ||||||||||||||||||||
Sbjct: 49239 taatttacataagtatcctt 49220
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>emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F2K15
          Length = 129757

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   gtgcgtagatgctacagatttgta 385
             ||||||||||||||||| ||||||
Sbjct: 55861 gtgcgtagatgctacagttttgta 55838
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>gb|BT008355.1| Arabidopsis thaliana At3g49220 gene, complete cds
          Length = 1797

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  gtgcgtagatgctacagatttgta 385
            ||||||||||||||||| ||||||
Sbjct: 1354 gtgcgtagatgctacagttttgta 1331
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>emb|AL049279.1|HSM800064 Homo sapiens genomic DNA; cDNA DKFZp564I083 (from clone DKFZp564I083)
          Length = 3703

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 146  tttttgttcttttctgtttggcac 169
            |||||||||||||||||| |||||
Sbjct: 3548 tttttgttcttttctgttaggcac 3571
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>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184796

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tgtttttgttcttttctgtt 163
             ||||||||||||||||||||
Sbjct: 52732 tgtttttgttcttttctgtt 52751
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>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete
             sequence
          Length = 185825

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ataaagatgactccaagctg 73
             ||||||||||||||||||||
Sbjct: 49696 ataaagatgactccaagctg 49677
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>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete
             sequence
          Length = 90341

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   tgcttgacagaagtaatatc 616
             ||||||||||||||||||||
Sbjct: 44074 tgcttgacagaagtaatatc 44093
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>gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region
          Length = 176641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tttttgttcttttctgtttg 165
             ||||||||||||||||||||
Sbjct: 93020 tttttgttcttttctgtttg 93039
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>gb|AC099757.2| Homo sapiens chromosome 1 clone RP11-523K4, complete sequence
          Length = 154865

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   cacttgacttccctgcatca 593
             ||||||||||||||||||||
Sbjct: 72513 cacttgacttccctgcatca 72532
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>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence
          Length = 190534

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    aaataaagatgactccaagctgtt 75
             ||||||||||||||||||| ||||
Sbjct: 12878 aaataaagatgactccaaggtgtt 12901
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>gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, complete sequence
          Length = 204340

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   tttttgttcttttctgtttggcac 169
             |||||||||||||||||| |||||
Sbjct: 31680 tttttgttcttttctgttaggcac 31703
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>gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   tttttgttcttttctgtttggcac 169
             |||||||||||||||||| |||||
Sbjct: 31680 tttttgttcttttctgttaggcac 31703
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>gb|AC018422.9| Homo sapiens, clone RP11-19G4, complete sequence
          Length = 157508

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    aaataaagatgactccaagctgtt 75
             ||||||||||||||||||| ||||
Sbjct: 51766 aaataaagatgactccaaggtgtt 51743
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>gb|AY059834.1| Arabidopsis thaliana pectinesterase-like protein (F2K15.80) mRNA,
            complete cds
          Length = 2019

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  gtgcgtagatgctacagatttgta 385
            ||||||||||||||||| ||||||
Sbjct: 1386 gtgcgtagatgctacagttttgta 1363
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>gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, complete sequence
          Length = 201687

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   gctgcagcaactccaaccat 481
             ||||||||||||||||||||
Sbjct: 59475 gctgcagcaactccaaccat 59494
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>gb|AC093545.1| Homo sapiens chromosome X clone RP5-1015P16A, complete sequence
          Length = 174725

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   tggtttccacttgacttccc 586
             ||||||||||||||||||||
Sbjct: 80884 tggtttccacttgacttccc 80865
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>emb|CR391515.1| Gallus gallus finished cDNA, clone ChEST761c7
          Length = 969

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 143 gtgtttttgttcttttctgtttggcact 170
           ||||||||||| |||||||||| |||||
Sbjct: 566 gtgtttttgttattttctgttttgcact 539
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>gb|AF325050.2|AF325050 Arabidopsis thaliana AT3g49220 (AT3g49220/F2K15_80) mRNA, complete
           cds
          Length = 654

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 362 gtgcgtagatgctacagatttgta 385
           ||||||||||||||||| ||||||
Sbjct: 41  gtgcgtagatgctacagttttgta 18
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>gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162273

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   gtttttgttcttttctgttt 164
             ||||||||||||||||||||
Sbjct: 66304 gtttttgttcttttctgttt 66323
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>gb|AC012543.4|AC012543 Homo sapiens, clone RP11-1K11, complete sequence
          Length = 159697

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tcatccactttaatcacagt 341
             ||||||||||||||||||||
Sbjct: 55992 tcatccactttaatcacagt 55973
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>gb|AC142495.2| Homo sapiens chromosome X clone LL0XNC01-31A6 map Xp11.23, complete
             sequence
          Length = 41905

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ctagccagactgaccaaaaa 208
             ||||||||||||||||||||
Sbjct: 19716 ctagccagactgaccaaaaa 19697
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>emb|BX821518.1|CNS0AAAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL48ZA10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1019

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 203 tgcttgacagaagtaatatc 184
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>emb|BX824538.1|CNS0A5R5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH54ZH04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1835

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  gtgcgtagatgctacagatttgta 385
            ||||||||||||||||| ||||||
Sbjct: 1351 gtgcgtagatgctacagttttgta 1328
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>gb|AC154463.2| Mus musculus BAC clone RP24-144A20 from chromosome 9, complete sequence
          Length = 147232

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 50    ataaataaagatgactccaagctgttaa 77
             ||||||||||||| ||| ||||||||||
Sbjct: 64358 ataaataaagatggctcaaagctgttaa 64331
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>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete
              sequence
          Length = 250531

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     taatttacataagtatcctt 38
              ||||||||||||||||||||
Sbjct: 185776 taatttacataagtatcctt 185795
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>gb|AY086056.1| Arabidopsis thaliana clone 20875 mRNA, complete sequence
          Length = 1165

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tgcttgacagaagtaatatc 616
           ||||||||||||||||||||
Sbjct: 290 tgcttgacagaagtaatatc 271
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>gb|AF122955.1|AF122955 Globodera pallida microsatellite CL1 sequence
          Length = 304

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 141 ctgtgtttttgttcttttctgttt 164
           ||||||||||||| ||||||||||
Sbjct: 50  ctgtgtttttgttattttctgttt 27
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>gb|AC157505.2| Medicago truncatula chromosome 2 BAC clone mth2-102e17, complete
             sequence
          Length = 93179

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tttttgttcttttctgtttg 165
             ||||||||||||||||||||
Sbjct: 44086 tttttgttcttttctgtttg 44105
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>gb|AC007486.1|AC007486 Homo sapiens clone DJ1015P16A, complete sequence
          Length = 174725

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   tggtttccacttgacttccc 586
             ||||||||||||||||||||
Sbjct: 80884 tggtttccacttgacttccc 80865
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
              sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tgtttttgttcttttctgtt 163
              ||||||||||||||||||||
Sbjct: 170304 tgtttttgttcttttctgtt 170285
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    tcagtccagttgctgaacag 521
              ||||||||||||||||||||
Sbjct: 511858 tcagtccagttgctgaacag 511839
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>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    gtttttgttcttttctgttt 164
              ||||||||||||||||||||
Sbjct: 145546 gtttttgttcttttctgttt 145527
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>gb|AC091069.2| Homo sapiens chromosome 3 clone RP11-161L3 map 3p, complete sequence
          Length = 164802

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 546   ctgaaaaatccttggttgtt 565
             ||||||||||||||||||||
Sbjct: 27014 ctgaaaaatccttggttgtt 27033
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>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   gtttttgttcttttctgttt 164
             ||||||||||||||||||||
Sbjct: 25203 gtttttgttcttttctgttt 25184
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>emb|AL672309.8| Mouse DNA sequence from clone RP23-466J17 on chromosome X, complete
             sequence
          Length = 81843

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   ttttgttcttttctgtttgg 166
             ||||||||||||||||||||
Sbjct: 61556 ttttgttcttttctgtttgg 61537


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,488,268
Number of Sequences: 3902068
Number of extensions: 6488268
Number of successful extensions: 122962
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122782
Number of HSP's gapped (non-prelim): 180
length of query: 719
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 696
effective length of database: 17,143,297,704
effective search space: 11931735201984
effective search space used: 11931735201984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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