ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags10h17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191752.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2721 Score = 204 bits (103), Expect = 3e-49 Identities = 269/325 (82%) Strand = Plus / Minus Query: 312 cttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgcttg 371 ||||||||| ||||||||| |||||||| || ||||| | ||||||| |||| ||||||| Sbjct: 2710 cttcccagaccttgtaatcctgtccctcggcagcaactacccagtttgtggggccgcttg 2651 Query: 372 gttcaaaatgtccgctgccgatcttcatcattagattctcattaatctgggcggcataca 431 | ||||||||||| ||| |||||||| ||| |||||| ||||| || ||||| | Sbjct: 2650 gctcaaaatgtcctgcgccaatcttcattgttaccctctcatcaatctctgccgcatata 2591 Query: 432 aattctgttctgccttgattatcttgatcttgctgcggcactgaatctttaggcgctgtc 491 |||| ||||| || | ||||||||||||||| ||||| || |||||| |||| | || Sbjct: 2590 aatttccctctgctttcagtatcttgatcttgctacggcaatggatcttttggcgatttc 2531 Query: 492 tgatagaaatcaatttggcaatatcttgntgtaagtgtgagaagatgtgatcatagaaga 551 | |||||||| ||||| ||||| ||| | ||||| || || || || ||||||||||||| Sbjct: 2530 taatagaaattaatttagcaatctctggctgtaaatgcgaaaatatatgatcatagaaga 2471 Query: 552 ctgcaggagtgccaggatgcgtcaagatatagacatagccttgcatctccataccatagg 611 |||||||||||| || || || ||||| |||||||||||||||| |||||||||| ||| Sbjct: 2470 ttgcaggagtgcctgggtgagttaagatgtagacatagccttgcaactccataccaaagg 2411 Query: 612 ggaatctccaatgaccctgantaga 636 |||||||||||||||||||| |||| Sbjct: 2410 ggaatctccaatgaccctgagtaga 2386
>dbj|AK065152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B10, full insert sequence Length = 4179 Score = 204 bits (103), Expect = 3e-49 Identities = 269/325 (82%) Strand = Plus / Minus Query: 312 cttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgcttg 371 ||||||||| ||||||||| |||||||| || ||||| | ||||||| |||| ||||||| Sbjct: 3789 cttcccagaccttgtaatcctgtccctcggcagcaactacccagtttgtggggccgcttg 3730 Query: 372 gttcaaaatgtccgctgccgatcttcatcattagattctcattaatctgggcggcataca 431 | ||||||||||| ||| |||||||| ||| |||||| ||||| || ||||| | Sbjct: 3729 gctcaaaatgtcctgcgccaatcttcattgttaccctctcatcaatctctgccgcatata 3670 Query: 432 aattctgttctgccttgattatcttgatcttgctgcggcactgaatctttaggcgctgtc 491 |||| ||||| || | ||||||||||||||| ||||| || |||||| |||| | || Sbjct: 3669 aatttccctctgctttcagtatcttgatcttgctacggcaatggatcttttggcgatttc 3610 Query: 492 tgatagaaatcaatttggcaatatcttgntgtaagtgtgagaagatgtgatcatagaaga 551 | |||||||| ||||| ||||| ||| | ||||| || || || || ||||||||||||| Sbjct: 3609 taatagaaattaatttagcaatctctggctgtaaatgcgaaaatatatgatcatagaaga 3550 Query: 552 ctgcaggagtgccaggatgcgtcaagatatagacatagccttgcatctccataccatagg 611 |||||||||||| || || || ||||| |||||||||||||||| |||||||||| ||| Sbjct: 3549 ttgcaggagtgcctgggtgagttaagatgtagacatagccttgcaactccataccaaagg 3490 Query: 612 ggaatctccaatgaccctgantaga 636 |||||||||||||||||||| |||| Sbjct: 3489 ggaatctccaatgaccctgagtaga 3465
>gb|AY107009.1| Zea mays PCO139185 mRNA sequence Length = 971 Score = 174 bits (88), Expect = 2e-40 Identities = 266/326 (81%) Strand = Plus / Minus Query: 311 gcttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgctt 370 ||||||||||| |||||||| || ||||| || |||||||||||||| |||||||||| Sbjct: 621 gcttcccagattttgtaatcttgaccctcagcagcaacaatccagttctggggaccgctt 562 Query: 371 ggttcaaaatgtccgctgccgatcttcatcattagattctcattaatctgggcggcatac 430 || ||||||||| | ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct: 561 ggctcaaaatgttctgatccgattttcattgttaccttctcatcaatttcagccgcatat 502 Query: 431 aaattctgttctgccttgattatcttgatcttgctgcggcactgaatctttaggcgctgt 490 ||| || |||||||| | ||||||||||||||||||||| ||||||||| | || ||| Sbjct: 501 aaactcctctctgcctttagtatcttgatcttgctgcggcaatgaatcttttgacggtgt 442 Query: 491 ctgatagaaatcaatttggcaatatcttgntgtaagtgtgagaagatgtgatcatagaag 550 | || ||||| ||||| || || ||| | ||||||||||| || ||||| ||||||||| Sbjct: 441 cgaatggaaataaatttagcgatctctggttgtaagtgtgaaaatatgtggtcatagaag 382 Query: 551 actgcaggagtgccaggatgcgtcaagatatagacatagccttgcatctccataccatag 610 ||||| ||||||||||| || |||| ||| ||| | || ||||||| |||||||||||| Sbjct: 381 actgcgggagtgccagggtgtgtcaggatgtaggcgtatccttgcagttccataccatag 322 Query: 611 gggaatctccaatgaccctgantaga 636 ||||| |||||||| |||||| |||| Sbjct: 321 gggaacctccaatggccctgagtaga 296
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 145/170 (85%) Strand = Plus / Minus Query: 460 cttgctgcggcactgaatctttaggcgctgtctgatagaaatcaatttggcaatatcttg 519 |||||| ||||| || |||||| |||| | ||| |||||||| ||||| ||||| ||| | Sbjct: 29762638 cttgctacggcaatggatcttttggcgatttctaatagaaattaatttagcaatctctgg 29762579 Query: 520 ntgtaagtgtgagaagatgtgatcatagaagactgcaggagtgccaggatgcgtcaagat 579 ||||| || || || || ||||||||||||| |||||||||||| || || || ||||| Sbjct: 29762578 ctgtaaatgcgaaaatatatgatcatagaagattgcaggagtgcctgggtgagttaagat 29762519 Query: 580 atagacatagccttgcatctccataccataggggaatctccaatgaccct 629 |||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 29762518 gtagacatagccttgcaactccataccaaaggggaatctccaatgaccct 29762469 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 312 cttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgcttg 371 ||||||||| ||||||||| |||||||| || ||||| | ||||||| |||| ||||||| Sbjct: 29762888 cttcccagaccttgtaatcctgtccctcggcagcaactacccagtttgtggggccgcttg 29762829 Query: 372 gttcaaaatgtcc 384 | ||||||||||| Sbjct: 29762828 gctcaaaatgtcc 29762816
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 141 bits (71), Expect = 3e-30 Identities = 145/170 (85%) Strand = Plus / Minus Query: 460 cttgctgcggcactgaatctttaggcgctgtctgatagaaatcaatttggcaatatcttg 519 |||||| ||||| || |||||| |||| | ||| |||||||| ||||| ||||| ||| | Sbjct: 6733 cttgctacggcaatggatcttttggcgatttctaatagaaattaatttagcaatctctgg 6674 Query: 520 ntgtaagtgtgagaagatgtgatcatagaagactgcaggagtgccaggatgcgtcaagat 579 ||||| || || || || ||||||||||||| |||||||||||| || || || ||||| Sbjct: 6673 ctgtaaatgcgaaaatatatgatcatagaagattgcaggagtgcctgggtgagttaagat 6614 Query: 580 atagacatagccttgcatctccataccataggggaatctccaatgaccct 629 |||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 6613 gtagacatagccttgcaactccataccaaaggggaatctccaatgaccct 6564 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 312 cttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgcttg 371 ||||||||| ||||||||| |||||||| || ||||| | ||||||| |||| ||||||| Sbjct: 6983 cttcccagaccttgtaatcctgtccctcggcagcaactacccagtttgtggggccgcttg 6924 Query: 372 gttcaaaatgtcc 384 | ||||||||||| Sbjct: 6923 gctcaaaatgtcc 6911
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 141 bits (71), Expect = 3e-30 Identities = 145/170 (85%) Strand = Plus / Minus Query: 460 cttgctgcggcactgaatctttaggcgctgtctgatagaaatcaatttggcaatatcttg 519 |||||| ||||| || |||||| |||| | ||| |||||||| ||||| ||||| ||| | Sbjct: 92369 cttgctacggcaatggatcttttggcgatttctaatagaaattaatttagcaatctctgg 92310 Query: 520 ntgtaagtgtgagaagatgtgatcatagaagactgcaggagtgccaggatgcgtcaagat 579 ||||| || || || || ||||||||||||| |||||||||||| || || || ||||| Sbjct: 92309 ctgtaaatgcgaaaatatatgatcatagaagattgcaggagtgcctgggtgagttaagat 92250 Query: 580 atagacatagccttgcatctccataccataggggaatctccaatgaccct 629 |||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 92249 gtagacatagccttgcaactccataccaaaggggaatctccaatgaccct 92200 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 312 cttcccagatcttgtaatcatgtccctctgctgcaacaatccagtttatgggaccgcttg 371 ||||||||| ||||||||| |||||||| || ||||| | ||||||| |||| ||||||| Sbjct: 92619 cttcccagaccttgtaatcctgtccctcggcagcaactacccagtttgtggggccgcttg 92560 Query: 372 gttcaaaatgtcc 384 | ||||||||||| Sbjct: 92559 gctcaaaatgtcc 92547
>gb|AY939871.1| Actinidia chinensis plastid alpha-amylase (AMY3) mRNA, complete cds; nuclear gene for plastid product Length = 3334 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 538 gtgatcatagaagactgcaggagtgccaggatgcgtcaagatatagacatagccttgcat 597 |||||||||||| ||||| || || || ||||| |||| ||| || |||| |||||||| Sbjct: 2479 gtgatcatagaaaactgctggtgttccgggatgagtcaggatgtatgcatacccttgcat 2420 Query: 598 ctccataccataggggaatctccaatgaccctgantagagcccggngtcatgatt 652 |||| | ||| || |||||||||||||||||| |||| ||| | ||||||||| Sbjct: 2419 ctcctttccacctggaaatctccaatgaccctgagtaga-cccagtgtcatgatt 2366
>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence Length = 154201 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 495 tagaaatcaatttggcaatatct 517 ||||||||||||||||||||||| Sbjct: 71699 tagaaatcaatttggcaatatct 71721
>gb|AC099304.6| Rattus norvegicus 2 BAC CH230-149H21 (Children's Hospital Oakland Research Institute) complete sequence Length = 220543 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 cctctgctgcaacaatccagtt 357 |||||||||||||||||||||| Sbjct: 93142 cctctgctgcaacaatccagtt 93163
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaaatgtccgctgccgatctt 396 ||||||||||||||||||||| Sbjct: 354635 aaaatgtccgctgccgatctt 354655
>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1, TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1, TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1, TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8, TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5, TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3, TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2, TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3 of 3) Length = 232650 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 44971 tgcagggaaaatgcttccacagcca 44995
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aaaatgtccgctgccgatctt 396 ||||||||||||||||||||| Sbjct: 354446 aaaatgtccgctgccgatctt 354466
>gb|AC147068.3| Pan troglodytes BAC clone RP43-165E11 from 7, complete sequence Length = 177119 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 aatcatgtccctctgctgcaacaat 351 |||||||||||||||| |||||||| Sbjct: 88489 aatcatgtccctctgcagcaacaat 88465
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 497294 tgcagggaaaatgcttccacagcca 497318
>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence Length = 178573 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 327 aatcatgtccctctgctgcaacaat 351 |||||||||||||||| |||||||| Sbjct: 163246 aatcatgtccctctgcagcaacaat 163270
>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence Length = 180951 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 44935 tgcagggaaaatgcttccacagcca 44959
>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus and trypsinogen gene families Length = 216293 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 48681 tgcagggaaaatgcttccacagcca 48705
>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the TRBV25OR9-2 gene for T cell receptor beta variable 25/OR9-2, the PTENP1 gene for phosphatase and tensin homolog (mutated in multiple advanced cancers 1) pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor beta chain V region protein pseudogene, two novel genes, the 5' end of the PRSS3 gene for serine protease 3 (mesotrypsin) and two CpG islands, complete sequence Length = 130639 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 36 tgcagggaaaatgcttccacagcca 60
>gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, complete sequence Length = 93543 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 4432 tgcagggaaaatgcttccacagcca 4456
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctgcagggaaaatgcttccac 193 ||||||||||||||||||||| Sbjct: 463807 ctgcagggaaaatgcttccac 463827
>emb|AL139008.10| Human DNA sequence from clone RP11-255A11 on chromosome 9 Contains four novel genes, the gene for a novel protein similar to suppressor of G2 allele of SKP1 homolog, the gene for a novel protein similar to KIAA1074, a melanoma antigen pseudogene, a sorting nexin 18 (SNX18) pseudogene, a trypsin domain pseudogene, two genes for novel immunoglobulin domain containing proteins, the gene for a novel protein similar to annexin A2 (ANXA2), the gene for a novel protein similar to T-cell receptor beta chain V region proteins, a T-cell receptor beta chain V region protein LB2 pseudogene and two CpG islands, complete sequence Length = 159974 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 159910 tgcagggaaaatgcttccacagcca 159934
>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains the 3' end of the SNAP25 gene for 25kDa synaptosomal-associated protein, the RPL23AP6 gene for ribosomal protein L23a pseudogene 6, part of a novel gene and a hypoxia induced gene 1 (HIG1) pseudogene, complete sequence Length = 140306 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccact 194 ||||||||||||||||||||| Sbjct: 137937 tgcagggaaaatgcttccact 137957
>emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in linkage group 13, complete sequence Length = 184555 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gcaccagcagtggctaagtta 238 ||||||||||||||||||||| Sbjct: 71644 gcaccagcagtggctaagtta 71624
>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9 (TRBVOR9@) on chromosome 9 Length = 194564 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccactgcca 198 |||||||||||||||||||| |||| Sbjct: 48636 tgcagggaaaatgcttccacagcca 48660
>gb|AC022833.5| Homo sapiens chromosome , clone RP11-147C21, complete sequence Length = 177019 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctgcagggaaaatgcttccac 193 ||||||||||||||||||||| Sbjct: 157363 ctgcagggaaaatgcttccac 157343
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctgcagggaaaatgcttccac 193 ||||||||||||||||||||| Sbjct: 463807 ctgcagggaaaatgcttccac 463827
>gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C6, complete sequence Length = 160156 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 aatcatgtccctctgctgcaacaat 351 |||||||||||||||| |||||||| Sbjct: 131792 aatcatgtccctctgcagcaacaat 131768
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 545 tagaagactgcaggagtgccagga 568 |||||||||| ||||||||||||| Sbjct: 180546 tagaagactggaggagtgccagga 180523
>gb|AC150687.3| Bos taurus BAC CH240-243M2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 144223 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1391 tgcagggaaaatgcttccac 1372
>gb|AC149774.2| Bos taurus BAC CH240-10G15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186916 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 15944 tgcagggaaaatgcttccac 15963
>gb|AC158704.3| Microcebus murinus clone CH257-434D18, complete sequence Length = 257333 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 28851 tgcagggaaaatgcttccac 28870
>gb|AC146263.2| Pan troglodytes BAC clone RP43-28O1 from 7, complete sequence Length = 141252 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 91865 tgcagggaaaatgcttccac 91884
>gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, complete sequence Length = 277007 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 116249 tgcagggaaaatgcttccac 116230
>gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, complete sequence Length = 207020 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 64490 tgcagggaaaatgcttccac 64509
>gb|AC110563.4| Mus musculus chromosome 3, clone RP23-287O4, complete sequence Length = 237878 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 545 tagaagactgcaggagtgccagga 568 |||||||||| ||||||||||||| Sbjct: 215217 tagaagactggaggagtgccagga 215240
>gb|AC098592.5| Homo sapiens BAC clone RP11-403N12 from 7, complete sequence Length = 190672 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 98358 tgcagggaaaatgcttccac 98377
>gb|AC006148.3| Homo sapiens PAC clone RP5-902E20 from 7, complete sequence Length = 121110 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 107808 tgcagggaaaatgcttccac 107789
>gb|AC146057.2| Pan troglodytes BAC clone RP43-90E18 from 7, complete sequence Length = 210447 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 108581 tgcagggaaaatgcttccac 108562
>emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 on chromosome 6q22 Contains the 3' end of the HSF2 gene for Heat Shock Transcription Factor 2 and the 3' end of a novel gene for KIAA1253 protein (similar to tumor differentially expressed TDE1), complete sequence Length = 160203 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 118130 tgcagggaaaatgcttccac 118111
>emb|AL646087.8| Human DNA sequence from clone RP11-412K4 on chromosome 13 Contians the 3' end of the gene for osteoblast specific factor 2 (fasciclin I-like) (OSF-2), complete sequence Length = 42319 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 3858 tgcagggaaaatgcttccac 3839
>emb|AL592466.9| Human DNA sequence from clone RP11-428G2 on chromosome 10 Contains a novel gene, complete sequence Length = 113271 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 82182 tgcagggaaaatgcttccac 82163
>emb|AL592227.4| Human DNA sequence from clone RP11-32D4 on chromosome 9 Contains a CpG island, complete sequence Length = 55535 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 14928 tgcagggaaaatgcttccac 14909
>emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on chromosome X Contains the 5' end of the ZNF75 gene for zinc finger protein 75 (D8C6), gene FLJ23614, two novel genes, the 5' end of a novel gene, a novel pseudogene and four CpG islands, complete sequence Length = 177877 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 140166 tgcagggaaaatgcttccac 140147
>emb|AL359979.10| Human DNA sequence from clone RP11-239E10 on chromosome 1 Contains the 5' end of the TLR5 gene for toll-like receptor 5, two novel genes, the gene for a novel protein (FLJ10052) and a CpG island, complete sequence Length = 181466 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 70905 tgcagggaaaatgcttccac 70886
>emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chromosome 1 Contains the 3' end of the gene for lung type-I cell membrane-associated glycoprotein (T1A-2), a novel gene, the 5' end of the PRDM2 gene for PR domain containing 2 with ZNF domain and a CpG island, complete sequence Length = 111182 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 38345 tgcagggaaaatgcttccac 38326
>emb|AL355586.27| Human DNA sequence from clone RP11-59I9 on chromosome 6q16.3-21 Contains two novel genes, the 3' end of the C6orf210 gene for chromosome 6 open reading frame 210 and three CpG islands, complete sequence Length = 185311 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 21766 tgcagggaaaatgcttccac 21785
>emb|AL355303.16| Human DNA sequence from clone RP11-445P17 on chromosome 10 Contains the 5' end of the gene for a novel protein similar to aldo-keto reductase, the AKR1C4 gene for aldo-keto reductase family 1 member C4, a novel gene, an aldo-keto reductase pseudogene, a ribosomal protein L26 (RPL26) pseudogene, an ADP-ribosylation factor-like 4 (ARL4) pseudogene,. a novel gene and a CpG island, complete sequence Length = 145692 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 81035 tgcagggaaaatgcttccac 81054
>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete sequence Length = 175757 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 156700 tgcagggaaaatgcttccac 156681
>emb|AL355516.12| Human DNA sequence from clone RP11-442J17 on chromosome 13 Contains a KIAA0254 gene product pseudogene, two novel genes, a PHD finger protein 2 (PHF2) (GRC5) pseudogene and a CpG island, complete sequence Length = 93925 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1558 tgcagggaaaatgcttccac 1577
>emb|AL355607.10| Human DNA sequence from clone RP11-367F23 on chromosome 9 Contains a novel gene, complete sequence Length = 113308 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 11584 tgcagggaaaatgcttccac 11565
>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 Contains the SPRL2A gene for small proline rich-like (epidermal differentiation complex) 2A, the LEP1 gene for late envelope protein 1, a novel gene, the MCSP gene for mitochondrial capsule selenoprotein and the IVL gene for involucrin, complete sequence Length = 116067 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 88382 tgcagggaaaatgcttccac 88363
>gb|AC105275.3| Homo sapiens chromosome 1 clone RP11-359E8, complete sequence Length = 164736 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 94321 tgcagggaaaatgcttccac 94340
>emb|AL158218.11| Human DNA sequence from clone RP5-831K15 on chromosome 1p31.1-31.3 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 103186 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 33182 tgcagggaaaatgcttccac 33163
>emb|AL157828.14| Human DNA sequence from clone RP11-214I20 on chromosome 9p22.3-24 Contains the 5' end of a novel gene and the 3' end of a novel gene (FLJ38505 FLJ90271), complete sequence Length = 100927 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 46281 tgcagggaaaatgcttccac 46262
>gb|AC090571.5| Homo sapiens chromosome 8, clone RP11-313J18, complete sequence Length = 218627 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 154971 tgcagggaaaatgcttccac 154990
>gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, complete sequence Length = 174617 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 171195 tgcagggaaaatgcttccac 171214
>gb|AC068446.22| Homo sapiens chromosome 15, clone RP11-32B5, complete sequence Length = 158465 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 88567 tgcagggaaaatgcttccac 88548
>emb|AL033530.1|HS629A15 Human DNA sequence from clone RP4-629A15 on chromosome 1p31.1-31.3 Contains EST, complete sequence Length = 93643 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 11217 tgcagggaaaatgcttccac 11236
>gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, complete sequence Length = 210557 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 63338 tgcagggaaaatgcttccac 63319
>gb|AC118463.2| Homo sapiens chromosome 5 clone RP11-60F22, complete sequence Length = 98082 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gccactccattctgatgcca 258 |||||||||||||||||||| Sbjct: 23217 gccactccattctgatgcca 23198
>dbj|BS000666.1| Pan troglodytes chromosome Y clone:PTBY-003G06, complete sequences Length = 102559 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 51643 tgcagggaaaatgcttccac 51662
>gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155417 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 58241 tgcagggaaaatgcttccac 58260
>gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188105 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 107906 tgcagggaaaatgcttccac 107925
>gb|DQ397866.1| Cenarchaeum symbiosum clone C03F10, complete sequence Length = 41278 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gcgacaaagtctagggcgtt 310 |||||||||||||||||||| Sbjct: 29425 gcgacaaagtctagggcgtt 29406
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 185268 tgcagggaaaatgcttccac 185249
>dbj|AK128197.1| Homo sapiens cDNA FLJ46325 fis, clone TESTI4043371 Length = 4250 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 2498 tgcagggaaaatgcttccac 2479
>gb|AC142095.9| Medicago truncatula clone mth2-14c17, complete sequence Length = 110037 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tacaaattctgttctgcctt 447 |||||||||||||||||||| Sbjct: 87375 tacaaattctgttctgcctt 87394
>gb|AC099785.2| Homo sapiens chromosome 1 clone RP11-435I3, complete sequence Length = 186160 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 tagaaatcaatttggcaatatctt 518 |||||| ||||||||||||||||| Sbjct: 88263 tagaaagcaatttggcaatatctt 88240
>gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, complete sequence Length = 203171 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 72615 tgcagggaaaatgcttccac 72634
>gb|AC008400.5| Homo sapiens chromosome 5 clone CTC-264D2, complete sequence Length = 117409 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 59071 tgcagggaaaatgcttccac 59052
>gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, complete sequence Length = 181925 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 128002 tgcagggaaaatgcttccac 127983
>gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, complete sequence Length = 174293 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 107145 tgcagggaaaatgcttccac 107164
>gb|AC067854.14| Homo sapiens chromosome 8, clone RP11-513H8, complete sequence Length = 203982 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 53897 tgcagggaaaatgcttccac 53916
>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence Length = 163612 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 115424 tgcagggaaaatgcttccac 115443
>gb|AC074132.5| Homo sapiens chromosome 5 clone CTD-2266L18, complete sequence Length = 118131 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 30980 tgcagggaaaatgcttccac 30961
>gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, complete sequence Length = 149015 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 8398 tgcagggaaaatgcttccac 8379
>gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198068 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 23148 tgcagggaaaatgcttccac 23129
>gb|AC078983.17| Homo sapiens 12q BAC RP11-473M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163613 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 36621 tgcagggaaaatgcttccac 36602
>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence Length = 179744 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 119924 tgcagggaaaatgcttccac 119943
>gb|AC091829.2| Homo sapiens chromosome 5 clone CTD-2021O22, complete sequence Length = 92702 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 81424 tgcagggaaaatgcttccac 81443
>gb|AF238375.3| Homo sapiens chromosome 21 clone BAC 49B5 map 21q21, complete sequence Length = 166124 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 148785 tgcagggaaaatgcttccac 148804
>gb|AC090919.6| Homo sapiens chromosome 8, clone RP11-42C24, complete sequence Length = 184897 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 111893 tgcagggaaaatgcttccac 111874
>gb|AC011092.4| Homo sapiens, clone RP11-1H15, complete sequence Length = 192318 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 128427 tgcagggaaaatgcttccac 128408
>gb|AC008703.6| Homo sapiens chromosome 5 clone CTB-76P12, complete sequence Length = 214187 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 203044 tgcagggaaaatgcttccac 203025
>gb|AC090200.4| Homo sapiens chromosome 8, clone RP11-628E19, complete sequence Length = 149955 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 76926 tgcagggaaaatgcttccac 76945
>ref|XM_939565.1| PREDICTED: Homo sapiens hypothetical protein LOC648469 (LOC648469), mRNA Length = 2415 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 186 tgcagggaaaatgcttccac 167
>ref|XM_937797.1| PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC648711), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 422 tgcagggaaaatgcttccac 441
>ref|XM_928538.1| PREDICTED: Homo sapiens hypothetical protein LOC643608 (LOC643608), mRNA Length = 2415 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 186 tgcagggaaaatgcttccac 167
>ref|XM_928074.1| PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC645012), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 422 tgcagggaaaatgcttccac 441
>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence Length = 184875 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 21142 tgcagggaaaatgcttccac 21161
>gb|AC021914.7| Homo sapiens chromosome 11, clone RP11-68C8, complete sequence Length = 156507 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tacatataatttgacttcag 161 |||||||||||||||||||| Sbjct: 17979 tacatataatttgacttcag 17998
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1254121 tgcagggaaaatgcttccac 1254140
>gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, complete sequence Length = 174293 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 107145 tgcagggaaaatgcttccac 107164
>gb|AC008571.6| Homo sapiens chromosome 5 clone CTC-550M4, complete sequence Length = 214267 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 209242 tgcagggaaaatgcttccac 209223
>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence Length = 203043 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 169482 tgcagggaaaatgcttccac 169501
>gb|AC022740.4|AC022740 Homo sapiens chromosome 15, clone RP11-617D22, complete sequence Length = 162482 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 46642 tgcagggaaaatgcttccac 46623
>gb|AC034215.4|AC034215 Homo sapiens chromosome 5 clone CTD-2001K4, complete sequence Length = 142116 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 3607 tgcagggaaaatgcttccac 3626
>gb|AC126425.2| Lemur catta, clone -162D1, complete sequence Length = 154718 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 114482 tgcagggaaaatgcttccac 114501
>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence Length = 155606 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 3255 tgcagggaaaatgcttccac 3236
>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 58052 tgcagggaaaatgcttccac 58071
>gb|AC137875.13| Mus musculus chromosome 15, clone RP23-62B15, complete sequence Length = 195956 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tttgcagtagatacaaaaat 130 |||||||||||||||||||| Sbjct: 20478 tttgcagtagatacaaaaat 20459
>gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, complete sequence Length = 128148 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 37908 tgcagggaaaatgcttccac 37927
>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence Length = 168591 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 25586 tgcagggaaaatgcttccac 25567
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1323682 tgcagggaaaatgcttccac 1323701
>gb|AC010105.12| Homo sapiens BAC clone RP11-563E24 from 2, complete sequence Length = 193320 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 107584 tgcagggaaaatgcttccac 107603
>gb|AC020941.5| Homo sapiens chromosome 5 clone CTD-2312I9, complete sequence Length = 171317 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 120213 tgcagggaaaatgcttccac 120194
>gb|AC078824.13| Homo sapiens 12 BAC RP11-542B15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173697 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 148751 tgcagggaaaatgcttccac 148732
>gb|AC136352.10| Homo sapiens chromosome 15, clone RP11-116P24, complete sequence Length = 177255 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 138137 tgcagggaaaatgcttccac 138118
>gb|AC012414.12| Homo sapiens chromosome 15, clone RP11-403B2, complete sequence Length = 162400 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 149208 tgcagggaaaatgcttccac 149189
>gb|AC020553.4|AC020553 Homo sapiens BAC clone RP11-462D9 from 8, complete sequence Length = 160811 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 73004 tgcagggaaaatgcttccac 73023
>gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2, complete sequence Length = 206589 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 5353 tgcagggaaaatgcttccac 5372
>gb|AC073062.7| Homo sapiens BAC clone RP11-132H1 from 2, complete sequence Length = 135822 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 37884 tgcagggaaaatgcttccac 37865
>gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169849 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 95358 tgcagggaaaatgcttccac 95377
>gb|AC004819.2| Homo sapiens PAC clone RP1-15I23 from 22, complete sequence Length = 59113 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 34773 tgcagggaaaatgcttccac 34754
>gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, complete sequence Length = 200370 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 159246 tgcagggaaaatgcttccac 159227
>gb|AC123971.3| Lemur catta clone LB2-255J23, complete sequence Length = 222919 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 77678 tgcagggaaaatgcttccac 77697
>gb|AC026355.13| Homo sapiens 3 BAC RP11-114M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 143760 tgcagggaaaatgcttccac 143741
>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence Length = 153610 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 109280 tgcagggaaaatgcttccac 109261
>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence Length = 203755 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 aacaatccagtttatgggac 365 |||||||||||||||||||| Sbjct: 173925 aacaatccagtttatgggac 173906
>gb|AC008408.5|AC008408 Homo sapiens chromosome 5 clone CTC-278H1, complete sequence Length = 78877 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 5798 tgcagggaaaatgcttccac 5817
>gb|AC011422.2|AC011422 Homo sapiens chromosome 5 clone CTD-2335E17, complete sequence Length = 119668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 326 tgcagggaaaatgcttccac 345
>gb|AC008967.3|AC008967 Homo sapiens chromosome 5 clone CTD-2367A17, complete sequence Length = 88958 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 29431 tgcagggaaaatgcttccac 29412
>dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12, map 22, complete sequences Length = 189474 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 172749 tgcagggaaaatgcttccac 172730
>dbj|BS000057.1| Pan troglodytes chromosome 22 clone:RP43-020J03, map 22, complete sequences Length = 185342 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 144268 tgcagggaaaatgcttccac 144287
>dbj|AK130778.1| Homo sapiens cDNA FLJ27268 fis, clone TMS00396 Length = 2199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 191 tgcagggaaaatgcttccac 172
>gb|AC004993.1|AC004993 Homo sapiens PAC clone RP5-1194E14 from 7p21, complete sequence Length = 161453 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 70266 tgcagggaaaatgcttccac 70247
>emb|AL163246.2|HS21C046 Homo sapiens chromosome 21 segment HS21C046 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 26399 tgcagggaaaatgcttccac 26380
>gb|AC007198.6|AC007198 Homo sapiens, clone 18_A_13, complete sequence Length = 166977 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 81535 tgcagggaaaatgcttccac 81554
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209111 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 14070 tgcagggaaaatgcttccac 14051
>emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1082A3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171505 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 165627 tgcagggaaaatgcttccac 165608
>emb|AL357095.4|CNS05TDU Human chromosome 14 DNA sequence BAC R-48D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 96785 tgcagggaaaatgcttccac 96766
>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 336355 tgcagggaaaatgcttccac 336374
>gb|AC003106.1|AC003106 Homo sapiens Xp22 GS-524I1 (Genome Systems Human BAC library), complete sequence Length = 128888 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 36111 tgcagggaaaatgcttccac 36092
>dbj|AP004710.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1429D6, complete sequence Length = 179115 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1381 tgcagggaaaatgcttccac 1362
>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete sequence Length = 168850 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 149608 tgcagggaaaatgcttccac 149589
>gb|AC004677.1|AC004677 Homo Sapiens Chromosome X clone bWXD501, complete sequence Length = 128559 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 123287 tgcagggaaaatgcttccac 123268
>dbj|AP005242.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-805F19, complete sequence Length = 196360 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 97843 tgcagggaaaatgcttccac 97862
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 1342303 tgcagggaaaatgcttccac 1342322
>emb|AJ006995.1|HSF18108 Homo sapiens chromosome 21 PAC LLNLP704F18108Q13, complete sequence Length = 152383 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 23439 tgcagggaaaatgcttccac 23420
>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1, LL56-APP region, complete sequence Length = 204699 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgcagggaaaatgcttccac 193 |||||||||||||||||||| Sbjct: 80775 tgcagggaaaatgcttccac 80794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,121,980 Number of Sequences: 3902068 Number of extensions: 5121980 Number of successful extensions: 93216 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92793 Number of HSP's gapped (non-prelim): 422 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
