| Clone Name | rbags10h03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein Length = 1892 Score = 1318 bits (665), Expect = 0.0 Identities = 697/704 (99%), Gaps = 3/704 (0%) Strand = Plus / Minus Query: 1 tgagttcc-tatagtatttgtagttgatagtagtccgctcgctcacatgggtgtctacca 59 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789 tgagttccatatagtatttgtagttgatagtagtccgctcgctcacatgggtgtctacca 1730 Query: 60 agggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaacaagacg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1729 agggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaacaagacg 1670 Query: 120 tcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatttcatc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1669 tcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatttcatc 1610 Query: 180 tccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1609 tccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggc 1550 Query: 240 aagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactccagcggcctc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1549 aagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactccagcggcctc 1490 Query: 300 gttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgac 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1489 gttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgac 1430 Query: 360 gagaaccacttcgtctcgggactgcaggccagcaagcttcacatcgacccggccttggac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1429 gagaaccacttcgtctcgggactgcaggccagcaagcttcacatcgacccggccttggac 1370 Query: 420 gccgttgcttagaactgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1369 gccgttgcttagaactgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctc 1310 Query: 480 tgatatggccttattatagttggagaagtcgccgccaatggcgtcgcacactatcctccc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 tgatatggccttattatagttggagaagtcgccgccaatggcgtcgcacactatcctccc 1250 Query: 540 ggtgttcttttcatcctcctcctcgtcggcttgcccgcgagtgccgtcatgaaggtcgag 599 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1249 ggtgttcttttcatcctcctcctcgtcggcttgcccgcagttgccgtcatgaaggtcgag 1190 Query: 600 gttgaagacaattggaccgtatgcccgaggtggcc-accgatggcccagtgaggaccatg 658 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1189 gttgaagacaattggaccgtatg-ccgaggtggccaaccgatggcccagtgaggaccatg 1131 Query: 659 ttaccctggctgtcgcagctggtttgctgcgangtgtgttcttc 702 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1130 ttaccctggctgtcgcagctggtttgctgcgaggtgtgttcttc 1087
>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni Length = 328 Score = 218 bits (110), Expect = 2e-53 Identities = 236/276 (85%), Gaps = 14/276 (5%) Strand = Plus / Plus Query: 393 aagcttcacatcgacccggccttggacgccgttgcttagaactgcgtagatcacctccgc 452 ||||||||| |||||||||||||||| ||| |||||||| || ||||||||||||||||| Sbjct: 7 aagcttcacgtcgacccggccttggatgccattgcttaggacggcgtagatcacctccgc 66 Query: 453 ggggccgcagcgtgtgagg-acagtctctgatatggccttattatagttggagaagtcgc 511 |||||| ||| |||| | |||||||| ||||||||| | || ||||| |||||||||| Sbjct: 67 ggggccatagcctgtgccgtacagtctccgatatggccctgttgtagttagagaagtcgc 126 Query: 512 cgccaatggcgtcgcacactatcctcccggtgttcttttcatcctcctcctcgtcggctt 571 ||||||||| |||||| ||||||||| |||||||| || ||||||||||||||||||| Sbjct: 127 cgccaatggtgtcgcagactatcctcgcggtgttc---tcttcctcctcctcgtcggctt 183 Query: 572 gcccgcgagtgccgtcatgaaggtcgaggttgaagacaattggaccgtatgcccgaggtg 631 | | ||||||| ||||||||| ||||||||||||||| ||||| |||||||| Sbjct: 184 gtc---------cgtcatggaggtcgaggctgaagacaattggactgtatg-ccgaggtg 233 Query: 632 gccaccgatggcccagtgaggaccatgttaccctgg 667 ||||||||||||||||||| || |||||||||||| Sbjct: 234 accaccgatggcccagtgagcacgatgttaccctgg 269
>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence Length = 1034 Score = 117 bits (59), Expect = 5e-23 Identities = 136/161 (84%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 201 gtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggg 260 ||||||||||||||| ||||||||||||||||||||||| || || | ||||||||| | Sbjct: 706 gtcaagctcaatcgtcagcggcatgtgcagcggcacggcgagtgcttccctcgccaactg 647 Query: 261 gaccagctccccaggtcgcacgcgcactcca---gcggcctcgttgtagaagagcacaca 317 |||||| |||| ||||||||| ||||||| | |||| |||||||||||||| || Sbjct: 646 aaccagcccccccggtcgcacgttcactccattgtcaccctctttgtagaagagcacgca 587 Query: 318 gccgaaatcgaacagcttgctgcgagcaacgatcctgccga 358 ||| | || |||||||||||||||||||||||||| |||| Sbjct: 586 gccaacgtcaaacagcttgctgcgagcaacgatcctcccga 546 Score = 73.8 bits (37), Expect = 7e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 404 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 463 ||||||||||||||||||||||||| || || || |||||||| || || ||||| ||| Sbjct: 485 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcagggccatagc 426 Query: 464 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 523 || |||||||||| ||||||| | || |||||||||||||| ||||| ||| || Sbjct: 425 ccgtttggacagtctcgactatggccctgttgtagttggagaagtctccgccgatgcagt 366 Query: 524 cgcacactatcctcccg 540 |||| | |||||||||| Sbjct: 365 cgcagattatcctcccg 349 Score = 52.0 bits (26), Expect = 0.003 Identities = 66/79 (83%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 624 ccgaggtggccaccgatggcccagtgaggaccatgttaccctggctgtcgcagctggttt 683 |||||||||||| ||||||||||| || || | ||| |||||||||||||| ||||| Sbjct: 266 ccgaggtggccaatgatggcccagttagcacgaggttgccctggctgtcgca---ggttt 210 Query: 684 gctgcgangtgtgttcttc 702 ||| ||| |||| |||||| Sbjct: 209 gcttcgaggtgtcttcttc 191
>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence Length = 1251 Score = 117 bits (59), Expect = 5e-23 Identities = 241/302 (79%), Gaps = 6/302 (1%) Strand = Plus / Plus Query: 55 taccaagggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaaca 114 ||||||||||||| ||||||| | |||| ||| || |||||||| |||| | |||||| Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228 Query: 115 agacgtcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatt 174 || ||| | || || |||||| | | |||| ||||||||||| | |||| ||||||| Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288 Query: 175 tcatctccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggc 234 ||||| ||||| || || | | ||||||||||||||| |||||||||||||||||| Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345 Query: 235 acggcaagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactcca--- 291 ||||| ||||| | ||||||||| | | ||||| ||||||||| ||||||| Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405 Query: 292 gcggcctcgttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatc 351 | |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 406 tcaccctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacgatc 465 Query: 352 ct 353 || Sbjct: 466 ct 467 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 404 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 463 ||||||||||||||||||||||||| || || || |||||||| || |||||||| ||| Sbjct: 533 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcggggccatagc 592 Query: 464 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 523 || |||||||||| ||||||| | || ||||||||||||||| |||| ||| || Sbjct: 593 ccgtttggacagtctcgactatggccctgttgtagttggagaagtcgtcgccgatgcagt 652 Query: 524 cgcacactatcctcccg 540 |||| | |||||||||| Sbjct: 653 cgcagagtatcctcccg 669 Score = 73.8 bits (37), Expect = 7e-10 Identities = 102/122 (83%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 581 tgccgtcatgaaggtcgaggttgaagacaattggaccgtatgcccgaggtggccaccgat 640 |||| ||||| |||| || | ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 710 tgccatcatggaggtagaaggtgaaggcaattggactgtatgcc-gaggtggccaatgat 768 Query: 641 ggcccagtgaggaccatgttaccctggctgtcgcagctggtttgctgcgangtgtgttct 700 |||||||| || || | |||||||||||||||||| |||||||| ||| |||| |||| Sbjct: 769 ggcccagttagcacgaggttaccctggctgtcgca---ggtttgcttcgaggtgtcttct 825 Query: 701 tc 702 || Sbjct: 826 tc 827
>emb|AJ234730.1|HVU234730 Hordeum vulgare genomic DNA fragment; clone MWG2037.rev Length = 331 Score = 65.9 bits (33), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 663 cctggctgtcgcagctggtttgctgcgangtgtgttcttc 702 |||||||||||||||||||||||||||| | ||||||||| Sbjct: 65 cctggctgtcgcagctggtttgctgcgaggcgtgttcttc 26
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 tgtgcagcggcacggcaagcgc 245 |||||||||||||||||||||| Sbjct: 1043253 tgtgcagcggcacggcaagcgc 1043232
>gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbhS1) gene, partial cds; and hypothetical protein, phosphatidate cytidylytransferase (cds), undecaprenyl pyrophosphate (yaes), hypothetical protein, 3-deoxy-D-manno-2-octulosonate-8-phosphate synthase (kdsA), molybdenum transport system permease (modB), riboflavin synthase beta subunit (ribH), transcription termination factor (nusB), hypothetical protein, NADH dehydrogenase (nuo), cytochrome c peroxidase (ccpR), heat shock protein 70 (dnaK), and hypothetical protein genes, complete cds Length = 12698 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ccgacgagaaccacttcgtct 375 ||||||||||||||||||||| Sbjct: 9770 ccgacgagaaccacttcgtct 9750
>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence Length = 105161 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 ttcttttcatcctcctcctcg 564 ||||||||||||||||||||| Sbjct: 79189 ttcttttcatcctcctcctcg 79209
>emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial Length = 1820 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ccgacgagaaccacttcgtct 375 ||||||||||||||||||||| Sbjct: 1031 ccgacgagaaccacttcgtct 1011
>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein (DDB0229377), partial mRNA Length = 588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tatttgtagttgatagtagt 33 |||||||||||||||||||| Sbjct: 203 tatttgtagttgatagtagt 222
>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the complete genome Length = 290393 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gctcaatcgtgagcggcatg 225 |||||||||||||||||||| Sbjct: 215761 gctcaatcgtgagcggcatg 215780
>ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (MG06318.4) partial mRNA Length = 3699 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tcatcctcctcctcgtcggc 569 |||||||||||||||||||| Sbjct: 983 tcatcctcctcctcgtcggc 964
>ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor Tcf4 (TCF4), mRNA Length = 4491 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ttcttttcatcctcctcctcgtcg 567 |||||||| ||||||||||||||| Sbjct: 3979 ttcttttcctcctcctcctcgtcg 4002
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gaccagctccccaggtcgca 280 |||||||||||||||||||| Sbjct: 153238 gaccagctccccaggtcgca 153219
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttgtagaagagcacacagc 319 |||||||||||||||||||| Sbjct: 159141 gttgtagaagagcacacagc 159160
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcagcggcacggcaagcgcatgcc 250 ||||||||||||||||||| |||| Sbjct: 2556779 gcagcggcacggcaagcgcgtgcc 2556802
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gctcaatcgtgagcggcatg 225 |||||||||||||||||||| Sbjct: 3650813 gctcaatcgtgagcggcatg 3650794
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gaccagctccccaggtcgca 280 |||||||||||||||||||| Sbjct: 51098 gaccagctccccaggtcgca 51079
>ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision repair protein (Tc00.1047053508675.20) partial mRNA Length = 3357 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 2320 tttcatcctcctcctcgtcg 2301
>ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00.1047053506945.270) partial mRNA Length = 636 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 ggtgttcttttcatcctcct 559 |||||||||||||||||||| Sbjct: 609 ggtgttcttttcatcctcct 590
>emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chromosome 10 Contains part of the gene for a novel protein (KIAA1617) and a cytochrome c oxidase subunit VIc (COX6) pseudogene, complete sequence Length = 119265 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 gttcttttcatcctcctcct 562 |||||||||||||||||||| Sbjct: 12175 gttcttttcatcctcctcct 12194
>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin, strain DSM 5908 Length = 66669 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 gcgtagatcacctccgcggggccg 459 ||||||||||| |||||||||||| Sbjct: 44592 gcgtagatcacgtccgcggggccg 44569
>emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and partial dnaJ gene Length = 2934 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccgacgagaaccacttcgtc 374 |||||||||||||||||||| Sbjct: 1236 ccgacgagaaccacttcgtc 1217
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gaaatcgaacagcttgctgc 340 |||||||||||||||||||| Sbjct: 250392 gaaatcgaacagcttgctgc 250373
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gctcaatcgtgagcggcatg 225 |||||||||||||||||||| Sbjct: 3768518 gctcaatcgtgagcggcatg 3768499
>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20 Length = 208050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gctcaatcgtgagcggcatg 225 |||||||||||||||||||| Sbjct: 111744 gctcaatcgtgagcggcatg 111725
>gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA Length = 925 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 699 tttcatcctcctcctcgtcg 680
>ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA Length = 915 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 699 tttcatcctcctcctcgtcg 680
>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds Length = 2266 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 accaacaagacgtcctgtat 127 |||||||||||||||||||| Sbjct: 1270 accaacaagacgtcctgtat 1251
>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone BACR30I21, complete sequence Length = 161682 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 142340 tttcatcctcctcctcgtcg 142321
>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone BACR16P12, complete sequence Length = 171598 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 9483 tttcatcctcctcctcgtcg 9464
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttgtagaagagcacacagc 319 |||||||||||||||||||| Sbjct: 24090652 gttgtagaagagcacacagc 24090671
>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence Length = 203200 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 actgcaggccagcaagcttc 399 |||||||||||||||||||| Sbjct: 104383 actgcaggccagcaagcttc 104364
>gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds Length = 1917 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccgacgagaaccacttcgtc 374 |||||||||||||||||||| Sbjct: 1007 ccgacgagaaccacttcgtc 988
>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete sequence Length = 304772 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttcatcctcctcctcgtcg 567 |||||||||||||||||||| Sbjct: 158855 tttcatcctcctcctcgtcg 158836
>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gaccagctccccaggtcgca 280 |||||||||||||||||||| Sbjct: 35474 gaccagctccccaggtcgca 35455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,714,535 Number of Sequences: 3902068 Number of extensions: 4714535 Number of successful extensions: 86282 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86009 Number of HSP's gapped (non-prelim): 266 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)