ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein 1318 0.0
2emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; c... 218 2e-53
3gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence 117 5e-23
4gb|AY109619.1| Zea mays CL9605_1 mRNA sequence 117 5e-23
5emb|AJ234730.1|HVU234730 Hordeum vulgare genomic DNA fragment; c... 66 2e-07
6gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.62
7gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbh... 42 2.4
8gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete seq... 42 2.4
9emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial 42 2.4
10ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation facto... 40 9.6
11gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 9.6
12ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.6
13ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor T... 40 9.6
14gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosom... 40 9.6
15gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
16gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.6
17gb|AE009952.1| Yersinia pestis KIM, complete genome 40 9.6
18gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosom... 40 9.6
19ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision... 40 9.6
20ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00... 40 9.6
21emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chr... 40 9.6
22emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gen... 40 9.6
23emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and parti... 40 9.6
24emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 9.6
25emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 9.6
26emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; seg... 40 9.6
27gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA 40 9.6
28ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA 40 9.6
29gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds 40 9.6
30gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 9.6
31gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, r... 40 9.6
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
33gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561... 40 9.6
34gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK ge... 40 9.6
35gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 9.6
36gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosom... 40 9.6

>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score = 1318 bits (665), Expect = 0.0
 Identities = 697/704 (99%), Gaps = 3/704 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgagttcc-tatagtatttgtagttgatagtagtccgctcgctcacatgggtgtctacca 59
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1789 tgagttccatatagtatttgtagttgatagtagtccgctcgctcacatgggtgtctacca 1730

                                                                        
Query: 60   agggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaacaagacg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 agggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaacaagacg 1670

                                                                        
Query: 120  tcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatttcatc 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 tcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatttcatc 1610

                                                                        
Query: 180  tccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggc 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 tccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggc 1550

                                                                        
Query: 240  aagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactccagcggcctc 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1549 aagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactccagcggcctc 1490

                                                                        
Query: 300  gttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgac 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 gttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgac 1430

                                                                        
Query: 360  gagaaccacttcgtctcgggactgcaggccagcaagcttcacatcgacccggccttggac 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 gagaaccacttcgtctcgggactgcaggccagcaagcttcacatcgacccggccttggac 1370

                                                                        
Query: 420  gccgttgcttagaactgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctc 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 gccgttgcttagaactgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctc 1310

                                                                        
Query: 480  tgatatggccttattatagttggagaagtcgccgccaatggcgtcgcacactatcctccc 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 tgatatggccttattatagttggagaagtcgccgccaatggcgtcgcacactatcctccc 1250

                                                                        
Query: 540  ggtgttcttttcatcctcctcctcgtcggcttgcccgcgagtgccgtcatgaaggtcgag 599
            ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1249 ggtgttcttttcatcctcctcctcgtcggcttgcccgcagttgccgtcatgaaggtcgag 1190

                                                                        
Query: 600  gttgaagacaattggaccgtatgcccgaggtggcc-accgatggcccagtgaggaccatg 658
            ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1189 gttgaagacaattggaccgtatg-ccgaggtggccaaccgatggcccagtgaggaccatg 1131

                                                        
Query: 659  ttaccctggctgtcgcagctggtttgctgcgangtgtgttcttc 702
            |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1130 ttaccctggctgtcgcagctggtttgctgcgaggtgtgttcttc 1087



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>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score =  218 bits (110), Expect = 2e-53
 Identities = 236/276 (85%), Gaps = 14/276 (5%)
 Strand = Plus / Plus

                                                                       
Query: 393 aagcttcacatcgacccggccttggacgccgttgcttagaactgcgtagatcacctccgc 452
           ||||||||| |||||||||||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 7   aagcttcacgtcgacccggccttggatgccattgcttaggacggcgtagatcacctccgc 66

                                                                       
Query: 453 ggggccgcagcgtgtgagg-acagtctctgatatggccttattatagttggagaagtcgc 511
           ||||||  ||| ||||  | |||||||| ||||||||| | || ||||| ||||||||||
Sbjct: 67  ggggccatagcctgtgccgtacagtctccgatatggccctgttgtagttagagaagtcgc 126

                                                                       
Query: 512 cgccaatggcgtcgcacactatcctcccggtgttcttttcatcctcctcctcgtcggctt 571
           ||||||||| |||||| ||||||||| ||||||||   || |||||||||||||||||||
Sbjct: 127 cgccaatggtgtcgcagactatcctcgcggtgttc---tcttcctcctcctcgtcggctt 183

                                                                       
Query: 572 gcccgcgagtgccgtcatgaaggtcgaggttgaagacaattggaccgtatgcccgaggtg 631
           | |         ||||||| ||||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 184 gtc---------cgtcatggaggtcgaggctgaagacaattggactgtatg-ccgaggtg 233

                                               
Query: 632 gccaccgatggcccagtgaggaccatgttaccctgg 667
            ||||||||||||||||||| || ||||||||||||
Sbjct: 234 accaccgatggcccagtgagcacgatgttaccctgg 269



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>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  117 bits (59), Expect = 5e-23
 Identities = 136/161 (84%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 201 gtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggg 260
           ||||||||||||||| ||||||||||||||||||||||| || || | |||||||||  |
Sbjct: 706 gtcaagctcaatcgtcagcggcatgtgcagcggcacggcgagtgcttccctcgccaactg 647

                                                                       
Query: 261 gaccagctccccaggtcgcacgcgcactcca---gcggcctcgttgtagaagagcacaca 317
            |||||| |||| |||||||||  |||||||    |  |||| |||||||||||||| ||
Sbjct: 646 aaccagcccccccggtcgcacgttcactccattgtcaccctctttgtagaagagcacgca 587

                                                    
Query: 318 gccgaaatcgaacagcttgctgcgagcaacgatcctgccga 358
           ||| |  || |||||||||||||||||||||||||| ||||
Sbjct: 586 gccaacgtcaaacagcttgctgcgagcaacgatcctcccga 546



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 112/137 (81%)
 Strand = Plus / Minus

                                                                       
Query: 404 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 463
           ||||||||||||||||||||||||| || || || |||||||| || || |||||  |||
Sbjct: 485 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcagggccatagc 426

                                                                       
Query: 464 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 523
             ||  ||||||||||   ||||||| | || |||||||||||||| ||||| |||  ||
Sbjct: 425 ccgtttggacagtctcgactatggccctgttgtagttggagaagtctccgccgatgcagt 366

                            
Query: 524 cgcacactatcctcccg 540
           |||| | ||||||||||
Sbjct: 365 cgcagattatcctcccg 349



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 66/79 (83%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                       
Query: 624 ccgaggtggccaccgatggcccagtgaggaccatgttaccctggctgtcgcagctggttt 683
           ||||||||||||  ||||||||||| || || | ||| ||||||||||||||   |||||
Sbjct: 266 ccgaggtggccaatgatggcccagttagcacgaggttgccctggctgtcgca---ggttt 210

                              
Query: 684 gctgcgangtgtgttcttc 702
           ||| ||| |||| ||||||
Sbjct: 209 gcttcgaggtgtcttcttc 191



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>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  117 bits (59), Expect = 5e-23
 Identities = 241/302 (79%), Gaps = 6/302 (1%)
 Strand = Plus / Plus

                                                                       
Query: 55  taccaagggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaaca 114
           ||||||||||||| ||||||| | |||| ||| || ||||||||  ||||  | ||||||
Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228

                                                                       
Query: 115 agacgtcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatt 174
           || ||| | || ||  |||||| | | ||||  |||||||||||  | |||| |||||||
Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288

                                                                       
Query: 175 tcatctccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggc 234
           ||||| |||||   ||   || | | ||||||||||||||| ||||||||||||||||||
Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345

                                                                       
Query: 235 acggcaagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactcca--- 291
           ||||| ||||| | |||||||||  | | |||||     |||||||||  |||||||   
Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405

                                                                       
Query: 292 gcggcctcgttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatc 351
            |  |||| |||||||||||||| |||||||  |||||||||||||||||||||||||||
Sbjct: 406 tcaccctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacgatc 465

             
Query: 352 ct 353
           ||
Sbjct: 466 ct 467



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 404 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 463
           ||||||||||||||||||||||||| || || || |||||||| || ||||||||  |||
Sbjct: 533 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcggggccatagc 592

                                                                       
Query: 464 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 523
             ||  ||||||||||   ||||||| | || ||||||||||||||| |||| |||  ||
Sbjct: 593 ccgtttggacagtctcgactatggccctgttgtagttggagaagtcgtcgccgatgcagt 652

                            
Query: 524 cgcacactatcctcccg 540
           |||| | ||||||||||
Sbjct: 653 cgcagagtatcctcccg 669



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 102/122 (83%), Gaps = 4/122 (3%)
 Strand = Plus / Plus

                                                                       
Query: 581 tgccgtcatgaaggtcgaggttgaagacaattggaccgtatgcccgaggtggccaccgat 640
           |||| ||||| |||| || | ||||| ||||||||| ||||||| ||||||||||  |||
Sbjct: 710 tgccatcatggaggtagaaggtgaaggcaattggactgtatgcc-gaggtggccaatgat 768

                                                                       
Query: 641 ggcccagtgaggaccatgttaccctggctgtcgcagctggtttgctgcgangtgtgttct 700
           |||||||| || || | ||||||||||||||||||   |||||||| ||| |||| ||||
Sbjct: 769 ggcccagttagcacgaggttaccctggctgtcgca---ggtttgcttcgaggtgtcttct 825

             
Query: 701 tc 702
           ||
Sbjct: 826 tc 827



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>emb|AJ234730.1|HVU234730 Hordeum vulgare genomic DNA fragment; clone MWG2037.rev
          Length = 331

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 663 cctggctgtcgcagctggtttgctgcgangtgtgttcttc 702
           |||||||||||||||||||||||||||| | |||||||||
Sbjct: 65  cctggctgtcgcagctggtttgctgcgaggcgtgttcttc 26



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 224     tgtgcagcggcacggcaagcgc 245
               ||||||||||||||||||||||
Sbjct: 1043253 tgtgcagcggcacggcaagcgc 1043232



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>gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbhS1) gene, partial
            cds; and hypothetical protein, phosphatidate
            cytidylytransferase (cds), undecaprenyl pyrophosphate
            (yaes), hypothetical protein,
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            (kdsA), molybdenum transport system permease (modB),
            riboflavin synthase beta subunit (ribH), transcription
            termination factor (nusB), hypothetical protein, NADH
            dehydrogenase (nuo), cytochrome c peroxidase (ccpR), heat
            shock protein 70 (dnaK), and hypothetical protein genes,
            complete cds
          Length = 12698

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 355  ccgacgagaaccacttcgtct 375
            |||||||||||||||||||||
Sbjct: 9770 ccgacgagaaccacttcgtct 9750



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>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence
          Length = 105161

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   ttcttttcatcctcctcctcg 564
             |||||||||||||||||||||
Sbjct: 79189 ttcttttcatcctcctcctcg 79209



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>emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial
          Length = 1820

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 355  ccgacgagaaccacttcgtct 375
            |||||||||||||||||||||
Sbjct: 1031 ccgacgagaaccacttcgtct 1011



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>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein
           (DDB0229377), partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  tatttgtagttgatagtagt 33
           ||||||||||||||||||||
Sbjct: 203 tatttgtagttgatagtagt 222



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>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the
              complete genome
          Length = 290393

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    gctcaatcgtgagcggcatg 225
              ||||||||||||||||||||
Sbjct: 215761 gctcaatcgtgagcggcatg 215780



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>ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (MG06318.4) partial
           mRNA
          Length = 3699

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 550 tcatcctcctcctcgtcggc 569
           ||||||||||||||||||||
Sbjct: 983 tcatcctcctcctcgtcggc 964



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>ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor Tcf4 (TCF4), mRNA
          Length = 4491

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 544  ttcttttcatcctcctcctcgtcg 567
            |||||||| |||||||||||||||
Sbjct: 3979 ttcttttcctcctcctcctcgtcg 4002



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>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence
          Length = 211002

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    gaccagctccccaggtcgca 280
              ||||||||||||||||||||
Sbjct: 153238 gaccagctccccaggtcgca 153219



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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    gttgtagaagagcacacagc 319
              ||||||||||||||||||||
Sbjct: 159141 gttgtagaagagcacacagc 159160



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 227     gcagcggcacggcaagcgcatgcc 250
               ||||||||||||||||||| ||||
Sbjct: 2556779 gcagcggcacggcaagcgcgtgcc 2556802



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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     gctcaatcgtgagcggcatg 225
               ||||||||||||||||||||
Sbjct: 3650813 gctcaatcgtgagcggcatg 3650794



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>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete
             sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gaccagctccccaggtcgca 280
             ||||||||||||||||||||
Sbjct: 51098 gaccagctccccaggtcgca 51079



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>ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision repair protein
            (Tc00.1047053508675.20) partial mRNA
          Length = 3357

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  tttcatcctcctcctcgtcg 567
            ||||||||||||||||||||
Sbjct: 2320 tttcatcctcctcctcgtcg 2301



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>ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00.1047053506945.270)
           partial mRNA
          Length = 636

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 540 ggtgttcttttcatcctcct 559
           ||||||||||||||||||||
Sbjct: 609 ggtgttcttttcatcctcct 590



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>emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chromosome 10 Contains part
             of the gene for a novel protein (KIAA1617) and a
             cytochrome c oxidase subunit VIc (COX6) pseudogene,
             complete sequence
          Length = 119265

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   gttcttttcatcctcctcct 562
             ||||||||||||||||||||
Sbjct: 12175 gttcttttcatcctcctcct 12194



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>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
             strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 436   gcgtagatcacctccgcggggccg 459
             ||||||||||| ||||||||||||
Sbjct: 44592 gcgtagatcacgtccgcggggccg 44569



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>emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and partial dnaJ gene
          Length = 2934

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ccgacgagaaccacttcgtc 374
            ||||||||||||||||||||
Sbjct: 1236 ccgacgagaaccacttcgtc 1217



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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    gaaatcgaacagcttgctgc 340
              ||||||||||||||||||||
Sbjct: 250392 gaaatcgaacagcttgctgc 250373



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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     gctcaatcgtgagcggcatg 225
               ||||||||||||||||||||
Sbjct: 3768518 gctcaatcgtgagcggcatg 3768499



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>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20
          Length = 208050

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    gctcaatcgtgagcggcatg 225
              ||||||||||||||||||||
Sbjct: 111744 gctcaatcgtgagcggcatg 111725



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>gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 tttcatcctcctcctcgtcg 567
           ||||||||||||||||||||
Sbjct: 699 tttcatcctcctcctcgtcg 680



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>ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 548 tttcatcctcctcctcgtcg 567
           ||||||||||||||||||||
Sbjct: 699 tttcatcctcctcctcgtcg 680



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>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds
          Length = 2266

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  accaacaagacgtcctgtat 127
            ||||||||||||||||||||
Sbjct: 1270 accaacaagacgtcctgtat 1251



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>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
              BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 548    tttcatcctcctcctcgtcg 567
              ||||||||||||||||||||
Sbjct: 142340 tttcatcctcctcctcgtcg 142321



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>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone
            BACR16P12, complete sequence
          Length = 171598

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  tttcatcctcctcctcgtcg 567
            ||||||||||||||||||||
Sbjct: 9483 tttcatcctcctcctcgtcg 9464



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 300      gttgtagaagagcacacagc 319
                ||||||||||||||||||||
Sbjct: 24090652 gttgtagaagagcacacagc 24090671



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>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence
          Length = 203200

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    actgcaggccagcaagcttc 399
              ||||||||||||||||||||
Sbjct: 104383 actgcaggccagcaagcttc 104364



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>gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ccgacgagaaccacttcgtc 374
            ||||||||||||||||||||
Sbjct: 1007 ccgacgagaaccacttcgtc 988



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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 548    tttcatcctcctcctcgtcg 567
              ||||||||||||||||||||
Sbjct: 158855 tttcatcctcctcctcgtcg 158836



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>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete
             sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gaccagctccccaggtcgca 280
             ||||||||||||||||||||
Sbjct: 35474 gaccagctccccaggtcgca 35455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,714,535
Number of Sequences: 3902068
Number of extensions: 4714535
Number of successful extensions: 86282
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86009
Number of HSP's gapped (non-prelim): 266
length of query: 702
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 679
effective length of database: 17,143,297,704
effective search space: 11640299141016
effective search space used: 11640299141016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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