ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10g20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor ... 30 2.5

>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 78  ALXSQNCGSQFCRYSFGXGQG 16
           AL S  C + FC+Y++G G G
Sbjct: 157 ALSSPTCSNNFCQYTYGYGDG 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,733,389
Number of Sequences: 219361
Number of extensions: 49083
Number of successful extensions: 90
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 80,573,946
effective HSP length: 8
effective length of database: 78,819,058
effective search space used: 1891657392
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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