| Clone Name | rbags10g19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK112031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A09, full insert sequence Length = 1045 Score = 357 bits (180), Expect = 3e-95 Identities = 273/304 (89%) Strand = Plus / Minus Query: 240 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 299 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 756 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 697 Query: 300 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 359 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 696 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 637 Query: 360 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 419 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 636 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 577 Query: 420 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 479 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 576 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 517 Query: 480 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 539 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 516 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 457 Query: 540 cctg 543 |||| Sbjct: 456 cctg 453 Score = 143 bits (72), Expect = 9e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 456 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 397 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 396 catcataaactagaacacagcaatctgctccacggtagaatgcaacac 349 Score = 48.1 bits (24), Expect = 0.041 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 15 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 69 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 988 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 933
>dbj|AK111896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021E23, full insert sequence Length = 1046 Score = 357 bits (180), Expect = 3e-95 Identities = 273/304 (89%) Strand = Plus / Minus Query: 240 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 299 |||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| ||||| | Sbjct: 757 tcatgttctagcagcagcctgatgatctttgggcccggttgccacccaccacatccacgg 698 Query: 300 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 359 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 697 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 638 Query: 360 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 419 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 637 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 578 Query: 420 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 479 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct: 577 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccaccgt 518 Query: 480 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 539 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 517 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 458 Query: 540 cctg 543 |||| Sbjct: 457 cctg 454 Score = 143 bits (72), Expect = 9e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 457 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 398 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 397 catcataaactagaacacagcaatctgctccacggtagaatgcaacac 350 Score = 48.1 bits (24), Expect = 0.041 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 15 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 69 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 989 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 934
>ref|XM_475712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 343 bits (173), Expect = 5e-91 Identities = 263/293 (89%) Strand = Plus / Minus Query: 251 cagcatcctgacgatccttgaccccggttgccgcccaccacgtccacagtgtccggcata 310 ||||| ||||| |||| ||| |||||||||| |||||||| ||||| |||||||||| | Sbjct: 617 cagcagcctgatgatctttgggcccggttgccacccaccacatccacggtgtccggcaca 558 Query: 311 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 370 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 557 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 498 Query: 371 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 430 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 497 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 438 Query: 431 caccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaact 490 ||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||| Sbjct: 437 caccatgcctttgccttcttctcagagaccacacggctgttgccaccgtctacatcaact 378 Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 ||||| |||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 377 ttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttgcctg 325 Score = 143 bits (72), Expect = 9e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 328 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 269 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 268 catcataaactagaacacagcaatctgctccacggtagaatgcaacac 221
>gb|AY226827.1| Oryza sativa (indica cultivar-group) small GTP binding protein (Rab7) mRNA, complete cds Length = 1018 Score = 341 bits (172), Expect = 2e-90 Identities = 271/304 (89%) Strand = Plus / Minus Query: 240 tcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccacag 299 |||||||||| ||||| ||||| |||| | | |||||||||| |||||||| ||||| | Sbjct: 693 tcatgttctagcagcagcctgatgatcttggggcccggttgccacccaccacatccacgg 634 Query: 300 tgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacact 359 ||||||||| ||||| |||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 633 tgtccggcacatacagttcttcctctggttcattcttcagagcattctttacaatgcact 574 Query: 360 ggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttcc 419 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||| Sbjct: 573 ggaaagcctcctccacgtttgtaccatccttggcagatgtctcaaagtatgggatattcc 514 Query: 420 ctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccaccat 479 |||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||| | Sbjct: 513 ctttagaggcacaccatgcctttgccttcttctcagagaccacacggctgttgccactgt 454 Query: 480 ctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggctag 539 |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 453 ctacatcaactttgttgcccaaaagaacaaaagggaagttatcagggtctgatgggcttg 394 Query: 540 cctg 543 |||| Sbjct: 393 cctg 390 Score = 143 bits (72), Expect = 9e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 393 cctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattga 334 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 333 catcataaactagaacacagcaatctgctccacggtagaatgcaacac 286 Score = 48.1 bits (24), Expect = 0.041 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 15 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 69 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 925 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 870
>gb|AY109438.1| Zea mays CL8348_1 mRNA sequence Length = 1232 Score = 319 bits (161), Expect = 7e-84 Identities = 243/271 (89%) Strand = Plus / Plus Query: 273 cccggttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcat 332 |||||||||| |||||||||||||| || || |||| ||||| ||||||||||||||||| Sbjct: 559 cccggttgccacccaccacgtccacggtatctggcacatacagttcttcctctggctcat 618 Query: 333 tcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatccttgg 392 |||||||||| ||||| || ||||||||||| || || |||||||| |||| ||||| | Sbjct: 619 tcttcagagcattcttcacgatacactggaaggcgtcttccacgttcgttccgtccttag 678 Query: 393 cagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttct 452 |||| ||||||||||| |||||||||||||| || |||||||||||||| |||||| || Sbjct: 679 cagacgtctcaaagtacgggatgttccctttggaagcacaccatgcctttgcctttnnct 738 Query: 453 cagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaag 512 |||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 739 cagacaccacacggctgttcccaccatctacatcaactttgttacccaacagaacaaaag 798 Query: 513 ggaagttatcaggatctgatgggctagcctg 543 |||| |||||||||||||||||||||||||| Sbjct: 799 ggaaattatcaggatctgatgggctagcctg 829 Score = 131 bits (66), Expect = 4e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||||||||| |||||||||||||| || |||||||||||||| || |||| Sbjct: 826 cctgaattagaaactcttctcgccagttgttcaggttgtcaaatgatttcatagaattaa 885 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 |||| || ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 886 catcatagactaggacacaacaatctgctccccggtagaatgcaac 931 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 42 tgtattcacaagatatgacgctactgatga 71 |||||||||||| ||||||||||||||||| Sbjct: 325 tgtattcacaaggtatgacgctactgatga 354
>gb|BT024015.1| Zea mays clone EL01N0311D12 mRNA sequence Length = 1605 Score = 313 bits (158), Expect = 4e-82 Identities = 269/306 (87%) Strand = Plus / Minus Query: 238 cctcatgttctaacagcatcctgacgatccttgaccccggttgccgcccaccacgtccac 297 |||||||| |||||||| || || |||| ||| |||||||||| || ||||| ||||| Sbjct: 1329 cctcatgtcttaacagcagccagatgatctctgagcccggttgccacctaccacatccac 1270 Query: 298 agtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactataca 357 || || |||| ||||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 1269 ggtatctggcacatacaattcttcctccggttcattcttcagagcattctttacaataca 1210 Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| || || |||||||| |||||||||| ||||| ||||||||||| |||||||| Sbjct: 1209 ctggaaggcatcttccacgttcgttccatccttagcagacgtctcaaagtacgggatgtt 1150 Query: 418 ccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacc 477 |||||||||||| ||||||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 1149 ccctttagaggcgcaccatgcctttgcctttttctccgacaccacacggctgttcccacc 1090 Query: 478 atctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggct 537 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| Sbjct: 1089 atctacatcaactttgttacccaacagaacaaaagggaaattgtcaggatctgatgggct 1030 Query: 538 agcctg 543 ||||| Sbjct: 1029 cgcctg 1024 Score = 131 bits (66), Expect = 4e-27 Identities = 96/106 (90%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 |||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||| Sbjct: 1027 cctgaattagaaactcttcacgccagttgtgaagattatcaaacgatttcatagaattaa 968 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 |||| || ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 967 catcatagactaggacacaacaatctgctccccggtagaatgcaac 922 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 40 actgtattcacaagatatgacgctactgatg 70 |||||||||||||| |||||||||||||||| Sbjct: 1544 actgtattcacaaggtatgacgctactgatg 1514
>gb|U40219.1|PCU40219 Pennisetum ciliare possible apospory-associated protein mRNA, complete cds Length = 941 Score = 236 bits (119), Expect = 8e-59 Identities = 230/267 (86%) Strand = Plus / Minus Query: 277 gttgccgcccaccacgtccacagtgtccggcatatacaattcttcctctggctcattctt 336 |||||| |||||||| || |||||||| |||| ||||| |||||| || || ||||| || Sbjct: 684 gttgccacccaccacatcgacagtgtcaggcacatacagttcttcttcaggttcattttt 625 Query: 337 cagagcgttctttactatacactggaaagcctcctccacgttgattccatccttggcaga 396 ||| || |||||||| ||||| || ||||| || ||||| || |||| || |||||||| Sbjct: 624 cagggcattctttacaatacattgaaaagcatcttccacattagttccttctttggcaga 565 Query: 397 agtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcaga 456 ||||||||||| || ||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct: 564 tgtctcaaagtaaggtatgttgcctttcgaggcacaccaagcctttgcctttttctcaga 505 Query: 457 gaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaa 516 |||||| || ||||| |||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 504 gaccacacggctgttaccaccatcaacatcaactttgtttccaagcagaacaaaggggaa 445 Query: 517 gttatcaggatctgatgggctagcctg 543 |||||||||||| |||||||||||||| Sbjct: 444 gttatcaggatcagatgggctagcctg 418 Score = 151 bits (76), Expect = 4e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 421 cctgaataagaaattcttcacgccaattgttcagattatcaaacgatttcatagagttaa 362 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 361 catcataaactagaacacaacaatcagctccacgatagaatgcaacac 314
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 311 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 370 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 62656 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 62597 Query: 371 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 430 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 62596 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 62537 Query: 431 caccatgccttcgcctttttctcagagacc 460 ||||||||||| ||||| |||||||||||| Sbjct: 62536 caccatgcctttgccttcttctcagagacc 62507 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 616 acctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 675 |||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || Sbjct: 62251 acctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattg 62192 Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 62191 acatcataaactagaacacagcaatctgctccacggtagaatgcaacac 62143 Score = 107 bits (54), Expect = 5e-20 Identities = 101/114 (88%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 458 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 517 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 62402 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 62343 Query: 518 ttatcaggatctgatgggctagcctgtcaaagt-aaacacccaaagtgaaacag 570 |||||||| ||||||||||| |||||| ||||| ||||| ||||||||| |||| Sbjct: 62342 ttatcagggtctgatgggcttgcctgt-aaagtcaaacatccaaagtgagacag 62290 Score = 48.1 bits (24), Expect = 0.041 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 15 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 69 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 63272 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 63217
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 311 tacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctcc 370 |||| |||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 25422295 tacagttcttcctctggttcattcttcagagcattctttacaatgcactggaaagcctcc 25422236 Query: 371 tccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggca 430 |||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 25422235 tccacgtttgtaccatccttggcagatgtctcaaagtatgggatattccctttagaggca 25422176 Query: 431 caccatgccttcgcctttttctcagagacc 460 ||||||||||| ||||| |||||||||||| Sbjct: 25422175 caccatgcctttgccttcttctcagagacc 25422146 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 616 acctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 675 |||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || || Sbjct: 25421890 acctgaattagaaattcttcacgccagttgttaagattatcaaatgacttcatagaattg 25421831 Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 25421830 acatcataaactagaacacagcaatctgctccacggtagaatgcaacac 25421782 Score = 107 bits (54), Expect = 5e-20 Identities = 101/114 (88%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 458 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 517 ||||| || ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct: 25422041 accacacggctgttgccaccgtctacatcaactttgttgcccaaaagaacaaaagggaag 25421982 Query: 518 ttatcaggatctgatgggctagcctgtcaaagt-aaacacccaaagtgaaacag 570 |||||||| ||||||||||| |||||| ||||| ||||| ||||||||| |||| Sbjct: 25421981 ttatcagggtctgatgggcttgcctgt-aaagtcaaacatccaaagtgagacag 25421929 Score = 48.1 bits (24), Expect = 0.041 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 15 agtttacacttcacttattccgctgactgtattcacaa-gatatgacgctactgat 69 |||||||||| ||||||| | | || ||||||||||| ||||||||||||||||| Sbjct: 25422911 agtttacactcgacttatttcaccgattgtattcacaaagatatgacgctactgat 25422856
>gb|BT013071.1| Lycopersicon esculentum clone 114328R, mRNA sequence Length = 1042 Score = 121 bits (61), Expect = 3e-24 Identities = 154/185 (83%) Strand = Plus / Minus Query: 359 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 418 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 625 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 566 Query: 419 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 478 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 565 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 506 Query: 479 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 538 || |||||||||||||| ||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 505 tcaacatcaactttgttccccagcacgacaaatgggaagttctctggatcagatgggctt 446 Query: 539 gcctg 543 ||||| Sbjct: 445 gcctg 441 Score = 63.9 bits (32), Expect = 7e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || | Sbjct: 444 cctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattta 385 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| ||||| || ||||||||||| || || ||||| || ||||||| Sbjct: 384 catcataaacaaggacacaacaatcagcaccgcggtaaaaagcaacac 337
>dbj|AB071847.1| Arabidopsis thaliana mRNA for AtRab72, complete cds Length = 621 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 356 cactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatg 415 |||| ||||||| | || || |||| ||| || ||||| |||||||||||||| || ||| Sbjct: 512 cactcgaaagccgcatctacattgaatccttctttggcggaagtctcaaagtaaggaatg 453 Query: 416 ttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttccca 475 || |||||||| |||||||||||||| |||||||||||||| ||||| | || || ||| Sbjct: 452 tttcctttagatgcacaccatgcctttgcctttttctcagaaaccactctgctcttgcca 393 Query: 476 ccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatggg 535 || || |||||| ||||| |||| || |||||| || ||||| |||||||||||||| Sbjct: 392 ccgtcaacatcagtcttgttccccaacacaacaaacggaaagttttcaggatctgatgga 333 Query: 536 ctagcctg 543 |||||||| Sbjct: 332 ctagcctg 325 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 317 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatacaca 258 Query: 688 agaacacaacaatccgctccacggta 713 |||||||||||||||||||| ||||| Sbjct: 257 agaacacaacaatccgctcctcggta 232
>ref|NM_104107.2| Arabidopsis thaliana GTP binding AT1G52280 mRNA, complete cds Length = 939 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 509 aaagggaagttatcaggatctgatgggctagcctg 543 || || ||||| ||||||||||| || |||||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctg 462 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 454 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 395 Query: 688 agaacacaacaatccgctccacggtagaatgcaac 722 |||||||||||||||||||| ||||| || ||||| Sbjct: 394 agaacacaacaatccgctcctcggtaaaacgcaac 360
>gb|AY096407.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 652 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 479 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 420 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 419 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 360 Query: 509 aaagggaagttatcaggatctgatgggctagcctg 543 || || ||||| ||||||||||| || |||||||| Sbjct: 359 aatggaaagttttcaggatctgaaggactagcctg 325 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 317 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 258 Query: 688 agaacacaacaatccgctccacggtagaatgcaac 722 |||||||||||||||||||| ||||| || ||||| Sbjct: 257 agaacacaacaatccgctcctcggtaaaacgcaac 223
>gb|AY074361.1| Arabidopsis thaliana putative GTP-binding protein RAB7D (At1g52280) mRNA, complete cds Length = 894 Score = 117 bits (59), Expect = 5e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 616 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 557 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||||| ||||| | || || |||||||| |||||| ||||| |||| || |||| Sbjct: 556 ttctcagaaaccactctgctctttccaccatcaacatcagtcttgttccccaacacaaca 497 Query: 509 aaagggaagttatcaggatctgatgggctagcctg 543 || || ||||| ||||||||||| || |||||||| Sbjct: 496 aatggaaagttttcaggatctgaaggactagcctg 462 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 454 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 395 Query: 688 agaacacaacaatccgctccacggtagaatgcaac 722 |||||||||||||||||||| ||||| || ||||| Sbjct: 394 agaacacaacaatccgctcctcggtaaaacgcaac 360
>gb|DQ235201.1| Solanum tuberosum clone 171F12 unknown mRNA Length = 916 Score = 113 bits (57), Expect = 8e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 359 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 418 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 567 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 508 Query: 419 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 478 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 507 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 448 Query: 479 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 538 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 447 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 388 Query: 539 gcctg 543 ||||| Sbjct: 387 gcctg 383 Score = 71.9 bits (36), Expect = 3e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || | Sbjct: 386 cctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattta 327 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| ||||| || ||||||||||| || || |||||||| ||||||| Sbjct: 326 catcataaacaaggacacaacaatcagcaccgcggtagaaagcaacac 279
>gb|DQ222491.1| Solanum tuberosum clone 099C08 unknown mRNA Length = 967 Score = 113 bits (57), Expect = 8e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 359 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 418 |||||||||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 576 tggaaagcctcctctacgttggttccttccttagctgaagtttcaaagtagggaatgtta 517 Query: 419 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 478 || || || || ||||| ||| |||||||||||||| ||||| | ||| || |||||| Sbjct: 516 ccctttgaagcgcaccaggcccgagcctttttctcagacaccactctactatttccacca 457 Query: 479 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 538 || |||||||||||||| ||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 456 tcaacatcaactttgttccccagcacgacaaatggaaagttttctggatcagatgggctt 397 Query: 539 gcctg 543 ||||| Sbjct: 396 gcctg 392 Score = 71.9 bits (36), Expect = 3e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||| |||||||| | ||||||||||| || |||||||| ||||| || || | Sbjct: 395 cctgaattaagaactcttctctccagttgttcaagttttcaaatgacttcattgaattta 336 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| ||||| || ||||||||||| || || |||||||| ||||||| Sbjct: 335 catcataaacaaggacacaacaatcagcaccgcggtagaaagcaacac 288
>gb|AF116243.1|AF116243 Gossypium hirsutum RAS-related GTP-binding protein (Rab7) mRNA, complete cds Length = 1049 Score = 107 bits (54), Expect = 5e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 392 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 451 ||||| ||||||||||| || ||||| ||||| || |||||||||||||| || || ||| Sbjct: 555 gcagaggtctcaaagtaaggtatgtttccttttgaagcacaccatgcctttgctttcttc 496 Query: 452 tcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaa 511 ||||| |||||||||||||| ||||| || |||||||| ||||| |||| || |||||| Sbjct: 495 tcagaaaccacgcgactgttaccaccgtcaacatcaaccttgtttcccaacacaacaaat 436 Query: 512 gggaagttatcagg 525 || ||||| ||||| Sbjct: 435 ggaaagttttcagg 422 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatg 669 ||||||| ||||||||||| ||||||||||| ||||||||||| || |||||| Sbjct: 407 cctgaatcagaaactcttctcgccagttgttaagattatcaaaggacttcatg 355
>emb|Z73943.1|LJRAB7D L.japonicus mRNA for small GTP-binding protein, RAB7D Length = 1058 Score = 99.6 bits (50), Expect = 1e-17 Identities = 188/234 (80%) Strand = Plus / Minus Query: 310 atacaattcttcctctggctcattcttcagagcgttctttactatacactggaaagcctc 369 ||||| |||||| ||||| |||||||| || || || ||| ||||||| |||||||| | Sbjct: 636 atacatttcttcttctggttcattcttgagtgcattttttgctatacattggaaagcagc 577 Query: 370 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggc 429 || || |||| ||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 576 ttcaacattgaatccttcttttgcagaggtctcgaagtatggtatgtttccctttgaagc 517 Query: 430 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 489 |||||||||||| || || |||||||| | || || || ||||||||||| ||||| | Sbjct: 516 acaccatgcctttgctttcttctcagaaataactcggctattcccaccatcaacatctat 457 Query: 490 tttgttacccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 |||||| |||| | |||||| |||||||| ||||| || ||||| |||||||| Sbjct: 456 tttgtttcccaagacaacaaatgggaagttttcagggtcagatggactagcctg 403
>gb|L29274.1|TOBNTRAG Nicotiana tabacum SR1 Nt-rab7a mRNA, complete cds Length = 989 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 ||||| |||||||| || || |||||||||||||||| | ||||| |||| ||| || Sbjct: 636 tcatttttcagagcatttttggctatacactggaaagctgcatccacattgaatccctct 577 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || || || |||||||| ||||| ||||| || || || |||||||||||||| | || Sbjct: 576 tttgccgaggtctcaaaatatggtatgtttcccttggaagcacaccatgcctttactttc 517 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatc 486 |||||||||||||| |||||||| |||||||| ||||| Sbjct: 516 ttctcagagaccactcgactgttgccaccatcaacatc 479 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 |||| |||| ||| ||||| | ||||||||| ||||| |||||||| ||||| || | Sbjct: 425 cctggattaaaaattcttccctccagttgttaagattctcaaatgacttcataacattca 366 Query: 677 catcgtaaactagaacacaacaatccgctccacggta 713 ||| || ||||||||||||||||| ||||||||||| Sbjct: 365 cataatatactagaacacaacaatctgctccacggta 329
>dbj|AB024995.1| Cicer arietinum mRNA for rab-type small GTP-binding protein, partial cds Length = 578 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 299 gtgtccggcatatacaattcttcctctggctcattcttcagagcgttctttactatacac 358 ||||| |||| ||||| |||||| || || |||||||| || || || ||| |||||||| Sbjct: 306 gtgtcaggcagatacatttcttcttcaggttcattcttgagtgcattttttgctatacac 247 Query: 359 tggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgttc 418 |||||||| | || || || | ||| || || ||||| |||||||||||||| ||||| Sbjct: 246 tggaaagcagcttcaacattaaatccttcttttgcagatgtctcaaagtatggtatgttt 187 Query: 419 cctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgttcccacca 478 || || || |||||||||||||| || || |||||||| | || | || || |||||| Sbjct: 186 ccctttgaagcacaccatgcctttgctttcttctcagaaataactctgctatttccacca 127 Query: 479 tctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgatgggcta 538 || ||||| | |||||| |||| | ||||||||| ||||| ||||| || ||||| ||| Sbjct: 126 tcaacatcgattttgtttcccaagacaacaaaaggaaagttttcagggtcagatggacta 67 Query: 539 gcctg 543 ||||| Sbjct: 66 gcctg 62
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 64675 ttggcggaagtctcaaagtaaggaatgtttcctttagatgcacaccatgcctttgccttt 64616 Query: 449 ttctcaga 456 |||||||| Sbjct: 64615 ttctcaga 64608 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | |||||| || ||||||||||| |||||||| || ||||| || || Sbjct: 64334 aactcttccctccagttattaagattatcaaaagatttcataacattgacatcatagaca 64275 Query: 688 agaacacaacaatccgctccacggtagaatgcaac 722 |||||||||||||||||||| ||||| || ||||| Sbjct: 64274 agaacacaacaatccgctcctcggtaaaacgcaac 64240 Score = 44.1 bits (22), Expect = 0.64 Identities = 58/70 (82%) Strand = Plus / Minus Query: 473 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 532 |||||||| |||||| ||||| |||| || |||||| || ||||| ||||||||||| Sbjct: 64513 ccaccatcaacatcagtcttgttccccaacacaacaaatggaaagttttcaggatctgaa 64454 Query: 533 gggctagcct 542 || ||||||| Sbjct: 64453 ggactagcct 64444
>dbj|AK070320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D24, full insert sequence Length = 1188 Score = 87.7 bits (44), Expect = 5e-14 Identities = 170/212 (80%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 658 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 599 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 598 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 539 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 538 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 479 Query: 509 aaagggaagttatcaggatctgatgggctagc 540 |||||||| || || ||||||||||||||||| Sbjct: 478 aaagggaaattctctggatctgatgggctagc 447
>dbj|AK059958.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E06, full insert sequence Length = 1178 Score = 87.7 bits (44), Expect = 5e-14 Identities = 170/212 (80%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 646 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 587 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 586 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 527 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 526 ttctcagaaacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 467 Query: 509 aaagggaagttatcaggatctgatgggctagc 540 |||||||| || || ||||||||||||||||| Sbjct: 466 aaagggaaattctctggatctgatgggctagc 435
>gb|U82219.1|PAU82219 Prunus armeniaca Rab7 GTP binding protein mRNA, complete cds Length = 987 Score = 87.7 bits (44), Expect = 5e-14 Identities = 149/184 (80%) Strand = Plus / Minus Query: 351 ctatacactggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatg 410 ||||||||||||| || || ||||| || | || || || ||||| ||||||||||||| Sbjct: 611 ctatacactggaaggcatcatccacattaaagccctcttttgcagaggtctcaaagtatg 552 Query: 411 ggatgttccctttagaggcacaccatgccttcgcctttttctcagagaccacgcgactgt 470 | ||||| || || || |||||||| ||||| || || || ||||| ||||| ||||| | Sbjct: 551 gtatgtttcccttggaagcacaccaggcctttgctttcttttcagaaaccactcgactat 492 Query: 471 tcccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctg 530 | |||||||| ||||||| ||||| |||| || ||||| |||||||| ||||| |||| Sbjct: 491 ttccaccatcaacatcaatcttgttccccaacacgacaaatgggaagttttcagggtctg 432 Query: 531 atgg 534 |||| Sbjct: 431 atgg 428 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||| ||||| ||||| | ||||||||| ||||| ||||||||||||||| || | Sbjct: 422 cctgaatcagaaattcttccctccagttgttaagattttcaaatgatttcatgacattca 363 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaa 716 |||| || || |||||||| ||||| || ||||| ||||| Sbjct: 362 catcatacacaagaacacagcaatctgcaccacgatagaa 323
>dbj|AB026654.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVE11 Length = 75508 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 616 acctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 675 ||||| || ||||| ||||| | ||||||||||||||| ||||||||||||||||| || Sbjct: 69275 acctggatcagaaattcttccctccagttgttcagattttcaaatgatttcatggaattg 69216 Query: 676 acatcgtaaactagaacacaacaatccgctccacggta 713 ||||| || || |||||||| ||||| || |||||||| Sbjct: 69215 acatcatatacaagaacacagcaatcagcaccacggta 69178 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 69610 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 69551 Query: 447 ttttctc 453 ||||||| Sbjct: 69550 ttttctc 69544
>ref|NM_112768.1| Arabidopsis thaliana GTP binding AT3G18820 mRNA, complete cds Length = 1027 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 485 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 426 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| ||||| || |||||||| Sbjct: 425 acaagaacacagcaatcagcaccacggta 397 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 646 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 587 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 586 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 527 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 526 caaatggaaaattctctggatctgatggactcgcctg 490
>gb|AY059072.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 652 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 320 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 261 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| ||||| || |||||||| Sbjct: 260 acaagaacacagcaatcagcaccacggta 232 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctg 325
>gb|AY035137.1| Arabidopsis thaliana putative GTP binding protein (At3g18820) mRNA, complete cds Length = 857 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 407 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 348 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| ||||| || |||||||| Sbjct: 347 acaagaacacagcaatcagcaccacggta 319 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 568 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 509 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 508 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 449 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 448 caaatggaaaattctctggatctgatggactcgcctg 412
>dbj|AB071846.1| Arabidopsis thaliana mRNA for AtRab71, complete cds Length = 621 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 320 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 261 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| ||||| || |||||||| Sbjct: 260 acaagaacacagcaatcagcaccacggta 232 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 481 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 422 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 421 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 362 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 361 caaatggaaaattctctggatctgatggactcgcctg 325
>gb|L29275.1|TOBNTRAH Nicotiana tabacum SR1 Nt-rab7b mRNA, complete cds Length = 1563 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Minus Query: 386 tccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcc 445 |||||||| |||||||||||||| || ||||| || || || || ||||| || ||| Sbjct: 527 tccttggctgaagtctcaaagtagggaatgttaccctttgaagcgcaccaggctcgagcc 468 Query: 446 tttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcaga 505 |||||||| || ||||| | |||||| |||||||| | |||||||||||| ||||||| | Sbjct: 467 tttttctccgacaccactctactgtttccaccatcaatatcaactttgttccccagcaca 408 Query: 506 acaaaagggaagttatcaggatctgatgggctagcctg 543 ||||| || || || || ||||| || ||||| ||||| Sbjct: 407 acaaatggaaaattttctggatccgacgggcttgcctg 370 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 617 cctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaa 676 ||||||||||||||||||| | ||| ||||| | || |||||||| ||||| || || | Sbjct: 373 cctgaattagaaactcttctctccaattgtttaagttttcaaatgacttcattgaattta 314 Query: 677 catcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 |||| || || || || || ||||| || || |||||||||||||||| Sbjct: 313 catcatacacaaggacgcagcaatcagcaccgcggtagaatgcaacac 266
>emb|BX823072.1|CNS0A63E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 807 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 429 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 370 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 369 ttttctctgaaaccactctgctgtttccatcatccacgtcaacgttgtttccgataagaa 310 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 309 caaatggaaaattctctggatctgatggactcgcctg 273 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 268 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 209 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| |||| || |||||||| Sbjct: 208 acaagaacacagcaatgagcaccacggta 180
>gb|AY084266.1| Arabidopsis thaliana clone 101693 mRNA, complete sequence Length = 1022 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 387 ccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcct 446 |||||||||| ||||||||||| || |||||||| || || |||||||| || || |||| Sbjct: 640 ccttggcagaggtctcaaagtaaggaatgttcccctttgaagcacaccaagctttagcct 581 Query: 447 ttttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaa 506 ||||||| || ||||| | ||||| ||| |||| || ||||| ||||| || | |||| Sbjct: 580 ttttctctgaaaccactctgctgtttccatcatccacgtcaaccttgtttccgataagaa 521 Query: 507 caaaagggaagttatcaggatctgatgggctagcctg 543 |||| || || || || ||||||||||| || ||||| Sbjct: 520 caaatggaaaattctctggatctgatggactcgcctg 484 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | || |||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 479 agaaattcttccctcctgttgttaagattttcaaatgatttcatggaattgacatcatat 420 Query: 685 actagaacacaacaatccgctccacggta 713 || |||||||| ||||| || |||||||| Sbjct: 419 acaagaacacagcaatcagcaccacggta 391
>ref|NM_188576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 Score = 71.9 bits (36), Expect = 3e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 539 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 480 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 479 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 420 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaactttgttacccagcagaaca 508 |||||| || || || || |||||||| ||||||| |||||| || || | |||| Sbjct: 419 ttctcactcacagtccggctattaccaccatcaacatcaattttgtttccaagtacaaca 360 Query: 509 aaagggaagttatcaggatctgatgggctagc 540 |||||||| || || ||||||||||||||||| Sbjct: 359 aaagggaaattctctggatctgatgggctagc 328
>emb|Z73942.1|LJRAB7C L.japonicus mRNA for small GTP-binding protein, RAB7C Length = 1022 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 619 tgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaaca 678 ||||| ||||| ||||| | ||||||||| || || |||||||||||||| || |||||| Sbjct: 413 tgaatgagaaattcttccctccagttgttaaggttgtcaaatgatttcattgaattaaca 354 Query: 679 tcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct: 353 tcatatacaagaacacagcaatcagcaccacgatagaaagcaac 310 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 |||||||| |||||||| || ||||| || ||||| || |||||||| || ||||| Sbjct: 566 ttggcagatgtctcaaaataagggatatttccttttgatgcacaccaagcacgagccttc 507 Query: 449 ttctcagagaccacgcgactgttcccaccatc 480 || || || ||||| | ||||||||||||||| Sbjct: 506 ttttctgaaaccactctactgttcccaccatc 475
>gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete sequence Length = 95118 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 639 ccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaaca 698 ||||||||| || || |||||||||||||| || ||||||||||| || |||||||| || Sbjct: 258 ccagttgttaaggttgtcaaatgatttcattgaattaacatcgtatacaagaacacagca 317 Query: 699 atccgctccacggtagaatgcaac 722 ||| || ||||| ||||| ||||| Sbjct: 318 atcagccccacgatagaaagcaac 341
>gb|AY108223.1| Zea mays PCO119199 mRNA sequence Length = 1158 Score = 71.9 bits (36), Expect = 3e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 398 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagag 457 ||||||||||| |||||||| || || || ||||||||||| || ||||| |||||||| Sbjct: 609 gtctcaaagtaggggatgtttccctttgaagcacaccatgctttagccttcttctcagaa 550 Query: 458 accacgcgactgttcccaccatctacatcaactttgttacccagcagaacaaaagggaag 517 || || ||||| |||||||| ||||| | |||||||| |||| |||||| ||||| Sbjct: 549 acagtccggctgttaccaccatcaacatcgatcttgttaccaagcacaacaaatgggaaa 490 Query: 518 ttatcaggatctgatgggct 537 || || || ||||||||||| Sbjct: 489 ttctctgggtctgatgggct 470 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 619 tgaattagaaactcttcacgccagttgttcagattatcaaatga 662 |||||||| || || |||||||||||||| || || |||||||| Sbjct: 465 tgaattaggaattcctcacgccagttgttgagcttttcaaatga 422
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 473 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 532 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 7045409 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 7045350 Query: 533 gggctagcctg 543 ||||||||||| Sbjct: 7045349 gggctagcctg 7045339 Score = 56.0 bits (28), Expect = 2e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 7045639 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 7045580 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 7045579 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 7045520 Query: 449 ttctcaga 456 |||||||| Sbjct: 7045519 ttctcaga 7045512
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 473 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 532 |||||||| ||||||| |||||| || || | |||||||||||| || || ||||||||| Sbjct: 32989 ccaccatcaacatcaattttgtttccaagtacaacaaaagggaaattctctggatctgat 32930 Query: 533 gggctagcctg 543 ||||||||||| Sbjct: 32929 gggctagcctg 32919 Score = 56.0 bits (28), Expect = 2e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 329 tcattcttcagagcgttctttactatacactggaaagcctcctccacgttgattccatcc 388 |||||||| | ||| ||| || ||||||||| ||||| |||||||||||| || || Sbjct: 33219 tcattcttgatagcattccttgctatacactcaaaagcagcctccacgttgaagccttct 33160 Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 || ||||| |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct: 33159 ttagcagatgtctcaaaataagggatgtttcccttagaagcacaccaagctttagctttc 33100 Query: 449 ttctcaga 456 |||||||| Sbjct: 33099 ttctcaga 33092
>emb|BX823067.1|CNS0A5YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 759 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||| ||||| | ||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 267 agaaattcttccctccagttgttcagattttcaaatgatttcatggaattgacatcatat 208 Query: 685 actagaacacaacaatccgctccacggta 713 | || | ||| ||||| ||||||||||| Sbjct: 207 ataagtatacagcaatcagctccacggta 179
>gb|AY365246.1| Cucumis sativus putative GTP-binding protein (Rab7b) mRNA, complete cds Length = 1008 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgccttt 448 ||||||||||| |||||||| ||||| |||||||| || |||||||| || |||||| Sbjct: 515 ttggcagaagtttcaaagtacgggatattcccttttgatgcacaccaagctcgtgccttt 456 Query: 449 ttctcagagaccacgcgactgttcccaccatctacatcaacttt 492 ||||| || || || | |||||| || ||||| ||||||||||| Sbjct: 455 ttctctgaaacaactctactgtttccgccatcaacatcaacttt 412 Score = 54.0 bits (27), Expect = 7e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 631 tcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactaga 690 ||||| ||||||||||| ||||| |||||||||||||| || || ||||| || || ||| Sbjct: 350 tcttcccgccagttgttaagattgtcaaatgatttcattgaattgacatcatacaccaga 291 Query: 691 acacaacaatc 701 || || ||||| Sbjct: 290 acgcagcaatc 280
>emb|BX824542.1|CNS0A5QW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 639 ccagttgttcagattatcaaatgatttcatggagttaacatcgtaaactagaacacaaca 698 ||||||||||| ||| ||||||||| ||||||| || ||||| || || | |||||| || Sbjct: 409 ccagttgttcatattttcaaatgatctcatggaattcacatcatatacaataacacagca 350 Query: 699 atccgctccacggta 713 |||||| |||||||| Sbjct: 349 atccgcaccacggta 335
>gb|U87142.1|MCU87142 Mesembryanthemum crystallinum Nt-rab7a homolog mRNA, complete cds Length = 999 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 430 acaccatgccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaac 489 ||||||||| || ||||||||||| || ||||| | | | | |||||||| ||||| | Sbjct: 525 acaccatgcttttgcctttttctcggaaaccactctgccgctgccaccatcaacatctat 466 Query: 490 tttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| ||||||| |||||||||||||||||| ||||| Sbjct: 465 cttgttccccagcaaaacaaaagggaagttatctggatc 427 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| || || ||||||||||| ||||||| Sbjct: 344 agaacacaacagtctgcaccacggtagaaagcaacac 308
>ref|XM_748345.1| Aspergillus fumigatus Af293 Rab small monomeric GTPase Rab7 (Afu5g12130) partial mRNA Length = 516 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 679 tcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| || ||||||||||||||||| || |||||||||||||||| Sbjct: 254 tcgtataccagaacacaacaatccgcaccccggtagaatgcaacac 209
>ref|NM_112480.2| Arabidopsis thaliana GTP binding AT3G16100 mRNA, complete cds Length = 940 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 415 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 356 Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| |||||||| |||||||| ||||||| Sbjct: 355 agaacacaacagtccgctcctcggtagaaagcaacac 319 Score = 46.1 bits (23), Expect = 0.16 Identities = 131/167 (78%) Strand = Plus / Minus Query: 377 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 436 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 589 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 530 Query: 437 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 496 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 529 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 470 Query: 497 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 |||| | ||| || |||||||| ||||||||||| || |||||||| Sbjct: 469 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctg 423
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 392 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 451 ||||| ||||| ||||| ||||| |||||||| || ||||||| | || || || ||| Sbjct: 610 gcagatgtctcgaagtaggggatattcccttttgaaacacaccagtcatttgctttcttc 551 Query: 452 tcagagaccacgcgactgttcccaccatc 480 ||||||||||| ||||| ||||||||||| Sbjct: 550 tcagagaccactcgactattcccaccatc 522
>gb|BT006376.1| Arabidopsis thaliana At3g16100 gene, complete cds Length = 621 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 317 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 258 Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| |||||||| |||||||| ||||||| Sbjct: 257 agaacacaacagtccgctcctcggtagaaagcaacac 221 Score = 46.1 bits (23), Expect = 0.16 Identities = 131/167 (78%) Strand = Plus / Minus Query: 377 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 436 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 437 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 496 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 497 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 |||| | ||| || |||||||| ||||||||||| || |||||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctg 325
>gb|AY084691.1| Arabidopsis thaliana clone 115178 mRNA, complete sequence Length = 896 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 419 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 360 Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| |||||||| |||||||| ||||||| Sbjct: 359 agaacacaacagtccgctcctcggtagaaagcaacac 323 Score = 46.1 bits (23), Expect = 0.16 Identities = 131/167 (78%) Strand = Plus / Minus Query: 377 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 436 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 593 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 534 Query: 437 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 496 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 533 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 474 Query: 497 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 |||| | ||| || |||||||| ||||||||||| || |||||||| Sbjct: 473 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctg 427
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 52181 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 52122 Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| |||||||| |||||||| ||||||| Sbjct: 52121 agaacacaacagtccgctcctcggtagaaagcaacac 52085
>dbj|AB071848.1| Arabidopsis thaliana mRNA for AtRab73, complete cds Length = 621 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 628 aactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaaact 687 |||||||| | ||||||||| ||||| ||||| |||||||| || ||||| | || Sbjct: 317 aactcttccctccagttgttaagattttcaaaggatttcataacattgacatcattcaca 258 Query: 688 agaacacaacaatccgctccacggtagaatgcaacac 724 ||||||||||| |||||||| |||||||| ||||||| Sbjct: 257 agaacacaacagtccgctcctcggtagaaagcaacac 221 Score = 46.1 bits (23), Expect = 0.16 Identities = 131/167 (78%) Strand = Plus / Minus Query: 377 ttgattccatccttggcagaagtctcaaagtatgggatgttccctttagaggcacaccat 436 |||| |||||| ||||| |||||||| ||||| || ||||| || || || |||||||| Sbjct: 491 ttgactccatctttggccgaagtctcgaagtaaggaatgtttcccttggatgcacaccaa 432 Query: 437 gccttcgcctttttctcagagaccacgcgactgttcccaccatctacatcaactttgtta 496 | || || || ||||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 431 gattttgctttcttctcagtaaccactcgactctttccaccgtcaacatctgtcttgttc 372 Query: 497 cccagcagaacaaaagggaagttatcaggatctgatgggctagcctg 543 |||| | ||| || |||||||| ||||||||||| || |||||||| Sbjct: 371 cccaagacaacgaaggggaagttttcaggatctgaaggactagcctg 325
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 217957 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 218016 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 668 tggagttaacatcgtaaactagaacacaacaatccgctccacggtagaa 716 ||||||| |||||||| || || ||||| || || |||||||||||||| Sbjct: 218251 tggagttgacatcgtatacgaggacacagcagtcggctccacggtagaa 218299
>ref|XM_567629.1| Cryptococcus neoformans var. neoformans JEC21 RAB small monomeric GTPase (CNK00660) partial mRNA Length = 964 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 ||||||||||| ||| |||||||| | |||||||||||||| |||||||| || ||||| Sbjct: 519 ctggaaagcctgctcgacgttgatagcctccttggcagaagtttcaaagtaaggaatgtt 460 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 668 tggagttaacatcgtaaactagaacacaacaatccgctccacggtagaa 716 ||||||| |||||||| || || ||||| || || |||||||||||||| Sbjct: 289 tggagttgacatcgtatacgaggacacagcagtcggctccacggtagaa 241
>emb|X65650.1|PSGTPBP P.sativum mRNA rab for ras-related GTP-binding protein Length = 915 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 619 tgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaaca 678 ||||| ||||||||||| | |||||| || || || |||||||| |||| || |||||| Sbjct: 397 tgaatgagaaactcttccctccagttattaaggttgtcaaatgacttcactgaattaaca 338 Query: 679 tcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct: 337 tcatatacaagaacacagcaatcagcaccacgatagaaagcaac 294 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 392 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 451 ||||| |||||||| |||||||| || ||||| | |||||||||||| ||||| || Sbjct: 547 gcagatgtctcaaaatatgggatatttccttttgctgcacaccatgcccgagccttcttt 488 Query: 452 tcagagaccacgcgactgttcccaccatc 480 ||||| ||||| | |||||| |||||||| Sbjct: 487 tcagaaaccactctactgtttccaccatc 459
>gb|L14930.1|SOYRAB7P Glycine max (Rab7p) mRNA, complete cds Length = 1166 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 401 tcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctcagagacc 460 |||||||| || || |||||||| | ||||||||| |||| || || |||||||| ||| Sbjct: 708 tcaaagtagggaatattcccttttgcggcacaccagtcctttgctttcttctcagaaacc 649 Query: 461 acgcgactgttcccaccatc 480 || ||||| ||||||||||| Sbjct: 648 actcgactattcccaccatc 629
>ref|XM_652601.1| Aspergillus nidulans FGSC A4 Ras-related protein Rab7 (AN0089.2), mRNA Length = 606 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 257 acatcgtaaacaaggacacaacagtcagctccccggtagaatgcaac 211
>emb|Z73940.1|LJRAB7A L.japonicus mRNA for small GTP-binding protein, RAB7A Length = 930 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 |||||||| ||| ||||||||| || |||||||||| |||||| |||||||| || Sbjct: 355 agaaactcctcatgccagttgtcaagggtatcaaatgacttcatgacattaacatcatac 296 Query: 685 actagaacacaacaatccgctcc 707 ||||||||||| ||||| ||||| Sbjct: 295 actagaacacagcaatctgctcc 273 Score = 48.1 bits (24), Expect = 0.041 Identities = 84/104 (80%) Strand = Plus / Minus Query: 392 gcagaagtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttc 451 ||||| ||||||||||| || || |||||||| || |||||||| | || || || ||| Sbjct: 511 gcagatgtctcaaagtagggaatattcccttttgaagcacaccagtcttttgctttcttc 452 Query: 452 tcagagaccacgcgactgttcccaccatctacatcaactttgtt 495 ||||| ||||| | ||| ||||| ||||| | ||||| |||||| Sbjct: 451 tcagaaaccactctactattcccgccatcaatatcaattttgtt 408
>dbj|AB072431.1| Aspergillus nidulans gene for small GTPase AvaA, complete cds Length = 1500 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaac 722 ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 850 acatcgtaaacaaggacacaacagtcagctccccggtagaatgcaac 804
>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence, complete sequence Length = 125021 Score = 50.1 bits (25), Expect = 0.010 Identities = 88/109 (80%) Strand = Plus / Plus Query: 616 acctgaattagaaactcttcacgccagttgttcagattatcaaatgatttcatggagtta 675 ||||| || ||||||||||| | ||||||||| |||| || |||||||| |||||| Sbjct: 107524 acctggatcagaaactcttccctccagttgttgagatcctcgaatgattttgcggagttg 107583 Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| || || |||||||| ||||| || ||||| || || ||||||| Sbjct: 107584 acatcatatacaagaacacagcaatcagcaccacgataaaacgcaacac 107632
>ref|NM_103820.2| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.1 mRNA, complete cds Length = 963 Score = 48.1 bits (24), Expect = 0.041 Identities = 81/100 (81%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 409 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 350 Query: 685 actagaacacaacaatccgctccacggtagaatgcaacac 724 || |||||||| ||||| || ||||| || || ||||||| Sbjct: 349 acaagaacacagcaatcagcaccacgataaaacgcaacac 310
>ref|NM_001036084.1| Arabidopsis thaliana GTP binding AT1G49300 transcript variant AT1G49300.2 mRNA, complete cds Length = 1001 Score = 48.1 bits (24), Expect = 0.041 Identities = 81/100 (81%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 413 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 354 Query: 685 actagaacacaacaatccgctccacggtagaatgcaacac 724 || |||||||| ||||| || ||||| || || ||||||| Sbjct: 353 acaagaacacagcaatcagcaccacgataaaacgcaacac 314
>emb|BX816308.1|CNS0AAI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 656 Score = 48.1 bits (24), Expect = 0.041 Identities = 81/100 (81%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 223 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 164 Query: 685 actagaacacaacaatccgctccacggtagaatgcaacac 724 || |||||||| ||||| || ||||| || || ||||||| Sbjct: 163 acaagaacacagcaatcagcaccacgataaaacgcaacac 124
>gb|BT004594.1| Arabidopsis thaliana At1g49300 gene, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.041 Identities = 81/100 (81%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 320 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 261 Query: 685 actagaacacaacaatccgctccacggtagaatgcaacac 724 || |||||||| ||||| || ||||| || || ||||||| Sbjct: 260 acaagaacacagcaatcagcaccacgataaaacgcaacac 221
>dbj|AB071849.1| Arabidopsis thaliana mRNA for AtRab74, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.041 Identities = 81/100 (81%) Strand = Plus / Minus Query: 625 agaaactcttcacgccagttgttcagattatcaaatgatttcatggagttaacatcgtaa 684 ||||||||||| | ||||||||| |||| || |||||||| |||||| ||||| || Sbjct: 320 agaaactcttccctccagttgttgagatcctcgaatgattttgcggagttgacatcatat 261 Query: 685 actagaacacaacaatccgctccacggtagaatgcaacac 724 || |||||||| ||||| || ||||| || || ||||||| Sbjct: 260 acaagaacacagcaatcagcaccacgataaaacgcaacac 221
>ref|XM_640819.1| Dictyostelium discoideum Rab GTPase (DDB0191507), partial mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttcccttt 423 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 473 ttggcagaagtttcaaagtatggaatgttaccttt 439
>ref|XM_321482.2| Anopheles gambiae str. PEST ENSANGP00000018151 (ENSANGG00000015662), partial mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 678 atcgtaaactagaacacaacaatccgctccacggtagaa 716 |||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 267 atcgtacactagcacacagcaatccgccccacggtagaa 229
>ref|XM_307368.2| Anopheles gambiae str. PEST ENSANGP00000013739 (ENSANGG00000011250), partial mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 678 atcgtaaactagaacacaacaatccgctccacggtagaa 716 |||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 267 atcgtacactagcacacagcaatccgccccacggtagaa 229
>gb|U02928.1|DDU02928 Dictyostelium discoideum Ax3 Rab7 mRNA, complete cds Length = 769 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 389 ttggcagaagtctcaaagtatgggatgttcccttt 423 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 523 ttggcagaagtttcaaagtatggaatgttaccttt 489
>gb|AY432204.1| Aedes aegypti ASAP ID: 43000 Rab protein 7 mRNA sequence Length = 728 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Minus Query: 678 atcgtaaactagaacacaacaatccgctccacggtagaatgc 719 |||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 372 atcgtatactagtacgcaacaatctgctccgcggtagaatgc 331
>ref|XM_362561.1| Magnaporthe grisea 70-15 hypothetical protein (MG08144.4) partial mRNA Length = 618 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 691 acacaacaatccgctccacggtagaatgcaacac 724 ||||| || ||||||||||||||||| ||||||| Sbjct: 254 acacagcagtccgctccacggtagaacgcaacac 221
>gb|BC072470.1| Rattus norvegicus RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:91396 IMAGE:7098657), complete cds Length = 2107 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 actgttcccaccatctacatcaactttgtt 495 |||||| ||||||||||||||||| ||||| Sbjct: 56239 actgtttccaccatctacatcaaccttgtt 56210
>emb|X12535.1|RNRASP23 Rat mRNA for ras-related protein p23 Length = 1269 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 418 ttgtttcccaacacaacaaaagggaagttctcaggatc 381
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence Length = 114538 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 actgttcccaccatctacatcaactttgtt 495 |||||| ||||||||||||||||| ||||| Sbjct: 12039 actgtttccaccatctacatcaaccttgtt 12010
>ref|NM_023950.3| Rattus norvegicus RAB7, member RAS oncogene family (Rab7), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 545 ttgtttcccaacacaacaaaagggaagttctcaggatc 508
>gb|AF286535.1|AF286535 Rattus norvegicus GTP-binding protein RAB7 (Rab7) mRNA, complete cds Length = 861 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 541 ttgtttcccaacacaacaaaagggaagttctcaggatc 504
>dbj|AB158428.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:LEC/Crj Length = 624 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>dbj|AB158427.1| Rattus norvegicus Rab7 mRNA for RAB7, complete cds, strain:F344/DuCrj Length = 624 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 491 ttgttacccagcagaacaaaagggaagttatcaggatc 528 ||||| |||| || ||||||||||||||| |||||||| Sbjct: 377 ttgtttcccaacacaacaaaagggaagttctcaggatc 340
>gb|AY849659.1| Magnaporthe grisea ras-related protein-like protein mRNA, complete cds Length = 1221 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 691 acacaacaatccgctccacggtagaatgcaacac 724 ||||| || ||||||||||||||||| ||||||| Sbjct: 537 acacagcagtccgctccacggtagaacgcaacac 504
>dbj|AB069906.1| Oryzias latipes RBM8 gene for RNA binding motif protein 8, partial cds Length = 5000 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 tcaggatctgatgggctagcctgtca 546 |||||||||||||||| ||||||||| Sbjct: 4395 tcaggatctgatgggccagcctgtca 4420
>dbj|AB069905.1| Oryzias latipes RBM8 mRNA for RNA binding motif protein 8, complete cds Length = 832 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 tcaggatctgatgggctagcctgtca 546 |||||||||||||||| ||||||||| Sbjct: 410 tcaggatctgatgggccagcctgtca 435
>gb|AC148465.2| Xenopus tropicalis clone CH216-65A19, complete sequence Length = 167567 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cccacagttgtgggccctcat 243 ||||||||||||||||||||| Sbjct: 110353 cccacagttgtgggccctcat 110333
>ref|XM_445802.1| Candida glabrata CBS138, CAGL0E02607g partial mRNA Length = 627 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| || ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 272 acatcatagactagtacacaacagtctgcaccacggtagaaagcaacac 224
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 676 acatcgtaaactagaacacaacaatccgctccacggtagaatgcaacac 724 ||||| || ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 249116 acatcatagactagtacacaacagtctgcaccacggtagaaagcaacac 249164
>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14, complete sequence Length = 179550 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 actacacaaacgtccacaaat 102 ||||||||||||||||||||| Sbjct: 170400 actacacaaacgtccacaaat 170420
>gb|AC093301.3| Homo sapiens chromosome 5 clone RP11-565F4, complete sequence Length = 178545 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 645 gttcagattatcaaatgattt 665 ||||||||||||||||||||| Sbjct: 57815 gttcagattatcaaatgattt 57835
>gb|U13170.1|CRU13170 Chlamydomonas reinhardtii YptC5 (yptC5) gene, complete cds Length = 2990 Score = 42.1 bits (21), Expect = 2.5 Identities = 69/85 (81%) Strand = Plus / Minus Query: 369 cctccacgttgattccatccttggcagaagtctcaaagtatgggatgttccctttagagg 428 ||||||||||||| | |||||||| || ||||| ||||| || ||| | || || |||| Sbjct: 2237 cctccacgttgatgtcctccttggccgacgtctcgaagtagggtatgctgcccttggagg 2178 Query: 429 cacaccatgccttcgcctttttctc 453 | ||||| ||||| ||||| ||||| Sbjct: 2177 cgcaccaggccttggccttcttctc 2153
>gb|AY829438.1| Pennisetum glaucum Rab7 mRNA, complete cds Length = 1090 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 410 gggatgttccctttagaggcacaccatgccttcgcctttttctc 453 ||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 522 gggatattccccttggaagcacaccatgctttagcctttttctc 479 Score = 40.1 bits (20), Expect = 9.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 473 ccaccatctacatcaactttgttacccagcagaacaaaagggaagttatcaggatctgat 532 |||||||| || |||| ||||| || || |||||||| ||||| || || ||||| ||| Sbjct: 459 ccaccatcaacgtcaatcttgtttccaagtagaacaaatgggaaattctctggatcagat 400 Query: 533 gggctagc 540 |||||||| Sbjct: 399 gggctagc 392
>ref|XM_526302.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-7 (LOC470919), mRNA Length = 624 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence Length = 135091 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gttgccgcccaccacgtccacagtgtcc 304 ||||||||||||||| ||| |||||||| Sbjct: 73094 gttgccgcccaccacttcctcagtgtcc 73067
>gb|AY321151.1| Aiptasia pulchella Rab7 mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 9.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 370 ctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||||||||| | || |||||| |||||||||||| |||||||| Sbjct: 616 ctccacgttgatggcttctttggcactagtctcaaagtaggggatgtt 569
>ref|NM_004637.5| Homo sapiens RAB7, member RAS oncogene family (RAB7), mRNA Length = 2240 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 733 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 674
>gb|AC186172.1| Ornithorhynchus anatinus chromosome UNK clone OABb-43A1, complete sequence Length = 180865 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ttcctctggctcattcttca 338 |||||||||||||||||||| Sbjct: 4032 ttcctctggctcattcttca 4051
>gb|U44104.1|HSU44104 Homo sapiens small GTP binding protein Rab7 mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome Length = 359853 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tactgatgataatgataaaa 82 |||||||||||||||||||| Sbjct: 344585 tactgatgataatgataaaa 344604
>gb|AC146014.2| Pan troglodytes BAC clone RP43-128N21 from 7, complete sequence Length = 178714 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 ctggactgttaatgaattat 603 |||||||||||||||||||| Sbjct: 39770 ctggactgttaatgaattat 39751
>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence Length = 220624 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tccttggcagaagtctcaaa 405 |||||||||||||||||||| Sbjct: 37282 tccttggcagaagtctcaaa 37301
>gb|AC113016.7| Mus musculus chromosome 9, clone RP23-181L13, complete sequence Length = 213244 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 639 ccagttgttcagattatcaa 658 |||||||||||||||||||| Sbjct: 73619 ccagttgttcagattatcaa 73638
>emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chromosome 1 Contains the 5' end of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 153926 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cactggaaagcctcctccac 375 |||||||||||||||||||| Sbjct: 89435 cactggaaagcctcctccac 89416
>emb|X93499.1|HSRAB7 H.sapiens mRNA for RAB7 protein Length = 2264 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 1103 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 1044
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tacccagcagaacaaaaggg 514 |||||||||||||||||||| Sbjct: 118936 tacccagcagaacaaaaggg 118955
>gb|BC008721.2| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:8453 IMAGE:2821435), complete cds Length = 1489 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17, complete sequence Length = 165743 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatgataatgataaaactac 86 |||||||||||||||||||| Sbjct: 152227 gatgataatgataaaactac 152208
>emb|BX548244.5| Zebrafish DNA sequence from clone CH211-220I15 in linkage group 20 Contains two genes for novel proteins similar to vertebrate pim oncogene family, the tcp10 gene for t-complex protein 10and the gene for a novel protein similar to human tubulin tyrosine ligase-like family member 2 (TTL2), complete sequence Length = 94110 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 aatgaattatgtaggataat 613 |||||||||||||||||||| Sbjct: 60985 aatgaattatgtaggataat 60966
>emb|CR859246.1| Pongo pygmaeus mRNA; cDNA DKFZp459E131 (from clone DKFZp459E131) Length = 2251 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 710 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 651
>emb|AL845424.14| Zebrafish DNA sequence from clone CH211-140L13 in linkage group 20, complete sequence Length = 73598 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 aatgaattatgtaggataat 613 |||||||||||||||||||| Sbjct: 70648 aatgaattatgtaggataat 70667
>dbj|AK094449.1| Homo sapiens cDNA FLJ37130 fis, clone BRACE2023069, weakly similar to RAS-RELATED PROTEIN RAB-7 Length = 1911 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 414 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 355
>gb|AF498942.1| Homo sapiens small GTP binding protein RAB7 (RAB7) mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, complete sequence Length = 179414 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ggctagcctgtcaaagtaaa 553 |||||||||||||||||||| Sbjct: 78329 ggctagcctgtcaaagtaaa 78348
>gb|AC093309.2| Homo sapiens chromosome 5 clone RP11-97P23, complete sequence Length = 169422 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 cccaaagtgaaacaggcaaa 575 |||||||||||||||||||| Sbjct: 143708 cccaaagtgaaacaggcaaa 143727
>emb|BX322796.12| Zebrafish DNA sequence from clone DKEY-210F16 in linkage group 17, complete sequence Length = 68234 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatgataatgataaaactac 86 |||||||||||||||||||| Sbjct: 33118 gatgataatgataaaactac 33099
>gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66685 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 49255 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 49314
>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence Length = 133042 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tttactatacactggaaagc 366 |||||||||||||||||||| Sbjct: 31736 tttactatacactggaaagc 31755
>gb|AC144772.2| Mus musculus BAC clone RP24-173G12 from chromosome 15, complete sequence Length = 160630 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 acactggaaagcctcctcca 374 |||||||||||||||||||| Sbjct: 110226 acactggaaagcctcctcca 110207
>gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G20, complete sequence Length = 164823 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 cctgaattagaaactcttca 636 |||||||||||||||||||| Sbjct: 157683 cctgaattagaaactcttca 157702
>emb|BX000487.7| Zebrafish DNA sequence from clone BUSM1-162F22 in linkage group 20, complete sequence Length = 105024 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 aatgaattatgtaggataat 613 |||||||||||||||||||| Sbjct: 81664 aatgaattatgtaggataat 81645
>dbj|AK000826.1| Homo sapiens cDNA FLJ20819 fis, clone ADSE00511 Length = 2190 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 676 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 617
>emb|AL974314.21| Zebrafish DNA sequence from clone DKEY-89P3 in linkage group 9, complete sequence Length = 192510 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 aatgaattatgtaggataat 613 |||||||||||||||||||| Sbjct: 11636 aatgaattatgtaggataat 11655
>gb|AF050175.1|AF050175 Homo sapiens Rab7 (Rab7) gene, complete cds Length = 624 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 501 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 442
>dbj|AK113741.1| Ciona intestinalis cDNA, clone:cicl007i22, full insert sequence Length = 2711 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 649 agattatcaaatgatttcat 668 |||||||||||||||||||| Sbjct: 948 agattatcaaatgatttcat 929
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tccttggcagaagtctcaaa 405 |||||||||||||||||||| Sbjct: 19677 tccttggcagaagtctcaaa 19658
>gb|BC013728.1| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:17256 IMAGE:3882701), complete cds Length = 1358 Score = 40.1 bits (20), Expect = 9.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 358 ctggaaagcctcctccacgttgattccatccttggcagaagtctcaaagtatgggatgtt 417 |||||| |||| |||||||||||| | ||||||||| ||||||||||| || ||||| Sbjct: 516 ctggaacgcctgctccacgttgatggcctccttggcactggtctcaaagtagggaatgtt 457
>gb|L08131.1|VVCPTVD Volvox carteri GTP-binding protein (yptV5) gene, complete CDS Length = 3102 Score = 40.1 bits (20), Expect = 9.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 398 gtctcaaagtatgggatgttccctttagaggcacaccatgccttcgcctttttctc 453 |||||||||||||| ||| | || || || || ||||||||||| ||||| ||||| Sbjct: 1987 gtctcaaagtatggtatgctgcccttggacgcgcaccatgccttagccttcttctc 1932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,149,249 Number of Sequences: 3902068 Number of extensions: 6149249 Number of successful extensions: 113518 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113181 Number of HSP's gapped (non-prelim): 321 length of query: 724 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 701 effective length of database: 17,143,297,704 effective search space: 12017451690504 effective search space used: 12017451690504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)