| Clone Name | rbags10g14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycos... | 57 | 3e-08 | 2 | ROS1_ARATH (Q9SJQ6) ROS1 protein (Repressor of silencing 1) (DEM... | 54 | 4e-07 | 3 | DML3_ARATH (O49498) DEMETER-like protein 3 | 35 | 0.16 | 4 | HAP2_HAEIN (P45387) Adhesion and penetration protein precursor (... | 31 | 3.0 |
|---|
>DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycosylase-related| protein DME) Length = 1729 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = -2 Query: 587 GFVCVRGFDRTSRAPRPLYARLHFPASKIIRNK 489 GFVCVRGF++ +RAPRPL ARLHFPASK+ NK Sbjct: 1696 GFVCVRGFEQKTRAPRPLMARLHFPASKLKNNK 1728
>ROS1_ARATH (Q9SJQ6) ROS1 protein (Repressor of silencing 1) (DEMETER-like| protein 1) Length = 1393 Score = 53.5 bits (127), Expect = 4e-07 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = -2 Query: 587 GFVCVRGFDRTSRAPRPLYARLHFPASKI 501 G+VCVRGFDR +R P+PL ARLHFPASK+ Sbjct: 1357 GYVCVRGFDRKTRGPKPLIARLHFPASKL 1385
>DML3_ARATH (O49498) DEMETER-like protein 3| Length = 1044 Score = 35.0 bits (79), Expect = 0.16 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 Query: 587 GFVCVRGFDRTSRAPRPLYARLHFP 513 GF+C+R FDR R P+ L RLH P Sbjct: 1006 GFLCLRAFDRKQRDPKELVRRLHTP 1030
>HAP2_HAEIN (P45387) Adhesion and penetration protein precursor (EC 3.4.21.-)| Length = 1394 Score = 30.8 bits (68), Expect = 3.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 91 NNMNNFEWMTSPMYNSWFKSHENNKQNG 174 NN+N ++ YN WF + NK NG Sbjct: 551 NNINKLDYRKEIAYNGWFGETDKNKHNG 578 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,181,783 Number of Sequences: 219361 Number of extensions: 1638928 Number of successful extensions: 3314 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3311 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)