>YQK7_CAEEL (Q09289) Hypothetical protein C56G2.7|
          Length = 374

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = -1

Query: 624 ASHLPEGSWTAGDILELLQSPPLRQQLDAFTHVLQTGQID--LAQFGVDPSKYKFTVASF 451
           A HLP     A ++ E +++P  RQ  D   H LQTGQ+   +AQFG+D +         
Sbjct: 269 APHLPTSDDPARELSETVRTPQFRQAADTLGHALQTGQLGPVVAQFGMDEATVGSANQGD 328

Query: 450 LEALEDSVANACTDGGNDSKTKKDGGNDPMDE 355
           +     ++  A  +GG D+   ++  +D   E
Sbjct: 329 IRGFAANLTKA--EGGEDAAKTQNSDDDATRE 358

>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific|
           homeobox protein 1)
          Length = 418

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
 Frame = +3

Query: 42  QRYQLEPQKHF*KYIHVTQLYQP----KPMEAFFRILKSRHGINW*IWKRLKASKIHSQN 209
           Q  +LE + H  KY+ +T+  Q     K  E   +I        W   KR+KA  + S  
Sbjct: 327 QLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKW---KRIKAGNVSS-- 381

Query: 210 SI*IRRGCQIKRPVICVPSDLKIDTFHRR*RHEQLTSRLQP 332
               R G  ++ P I VP  + ++ F  R +H+Q+    +P
Sbjct: 382 ----RSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQGARP 418

>GBX1_HUMAN (Q14549) Homeobox protein GBX-1 (Gastrulation and brain-specific|
           homeobox protein 1) (Fragment)
          Length = 139

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
 Frame = +3

Query: 42  QRYQLEPQKHF*KYIHVTQLYQP----KPMEAFFRILKSRHGINW*IWKRLKASKIHSQN 209
           Q  +LE + H  KY+ +T+  Q     K  E   +I        W   KR+KA  + S  
Sbjct: 48  QLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKW---KRIKAGNVSS-- 102

Query: 210 SI*IRRGCQIKRPVICVPSDLKIDTFHRR*RHEQLTSRLQP 332
               R G  ++ P I VP  + ++ F  R +H+Q+    +P
Sbjct: 103 ----RSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQGARP 139

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = +2

Query: 287  PPQMTA*ATHIKATALGAPRNQLSSMGSFP-PSFLVFESLPPSVQAFATESSNASRNEAT 463
            PP +T  AT I  TA G+  N  S+ G+ P P  L   +  P+  +    SS++ R   T
Sbjct: 4618 PPSLTTTATTI--TATGSTTNPSSTPGTTPIPPVLTSMATTPAATSSKATSSSSPRTATT 4675

Query: 464  VNLYLLGSTPN*ARSIWPVCST 529
            + +    +T + A S  P+ S+
Sbjct: 4676 LPVLTSTATKSTATSFTPIPSS 4697

>ADCY6_MOUSE (Q01341) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase|
           type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable
           adenylyl cyclase)
          Length = 1165

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 343 PQSTLVHGIISTIFLGL*IIASIC-TSVCHRVFQCLQERSNCEFIFTRVHSKLSKIYLAS 519
           P STL+ GI + IFL L +   IC    C   F    +R +   + +RVHS    I+   
Sbjct: 689 PYSTLILGIYAAIFLLLLVTVLICAVCSCGSFFPKALQRLSRNIVRSRVHSTAVGIFSVL 748

Query: 520 LQHMS 534
           L  +S
Sbjct: 749 LVFIS 753

>DPO3A_STAEQ (Q5HNK2) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1065

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  QLEPQKHF*KYIHVTQLYQPKPMEAFFRILKSRHGIN 161
           +L+P+ HF   + VT LY+P PME     +  RH  N
Sbjct: 561 RLQPE-HFEDIVAVTSLYRPGPMEEISTYITRRHNPN 596

>Y190_CHLPN (Q9Z8Z4) Hypothetical protein CPn_0190/CP0577/CPj0190/CpB0193|
          Length = 452

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -1

Query: 366 PMDES*LRGAPRAVALM*VAHAVICGGKYQFLNLMARKSQDVLFGTPSESRY 211
           P+D       PR + L  +   ++ G KY  L L A ++   L  +P+ SR+
Sbjct: 370 PIDNIFNMSQPRTIPLALLGQTMLAGQKYDILELAAHQTNQTLMISPNCSRF 421

>ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase|
           type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable
           adenylyl cyclase)
          Length = 1168

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 343 PQSTLVHGIISTIFLGL*IIASICTSV-CHRVFQCLQERSNCEFIFTRVHSKLSKIY 510
           P STL+ GI ++IFL L I   IC    C  +F    +R +   + +R HS    I+
Sbjct: 692 PHSTLMLGIYASIFLLLLITVLICAVYSCGSLFPKALQRLSRSIVRSRAHSTAVGIF 748

>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
 Frame = +3

Query: 366 DHFHHLSWSLNHCLHLYKRLPQSLPMPPGTKQL*IYIY*GPLQIEQDLFGQSAAHE*KHP 545
           +H    S    H  H Y   P SLP PP    L           ++D    S +    HP
Sbjct: 45  NHDRRTSTDTTHSRHRYPETPPSLPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHP 104

Query: 546 ---VAVAKEDFAAAQEYHQQSKNPPEDVMPT 629
               A+     AA+Q +H  S +    V PT
Sbjct: 105 SNQPAMLSPSTAASQHHHHHSSSSSYAVSPT 135

>DPO3A_STAES (Q8CNX0) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1065

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  QLEPQKHF*KYIHVTQLYQPKPMEAFFRILKSRHGIN 161
           +L+P+ HF   + VT LY+P PME     +  RH  N
Sbjct: 561 RLQPE-HFEDIVAVTSLYRPGPMEEIPTYITRRHNPN 596

>YGGC_ECOLI (P11664) Hypothetical protein yggC|
          Length = 237

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 342 PAINSRPWDHFHHL-SWSLNHCLHLYKRLPQSLPMPPGTKQL 464
           PAI + P D FHH  SW   H L  +K  P++  +   T+ L
Sbjct: 74  PAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENL 115

>K0195_MOUSE (Q7TSH8) Protein KIAA0195|
          Length = 1360

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 303 HEQLTSRL--QP*VHPAINSRPWDHFHHLSWSLNHCLHLYKRLPQSLPMPPGTK 458
           HE LT  L  +   HP +   P +H   L+ SLN+ LHL     +S  +  G K
Sbjct: 446 HEDLTDDLSTRSFCHPEVEEEPHEHDALLAGSLNNTLHLSNEQERSDWLADGPK 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,227,226
Number of Sequences: 219361
Number of extensions: 2218880
Number of successful extensions: 5470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5469
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)