ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10e22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 47 6e-05
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 33 0.64
3RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 32 1.1
4PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:... 32 1.1
5SIRK_ARATH (O64483) Senescence-induced receptor-like serine/thre... 32 1.1
6ELK1_MOUSE (P41969) ETS domain-containing protein Elk-1 31 2.4
7NDF2_RAT (Q63689) Neurogenic differentiation factor 2 (NeuroD2) ... 31 2.4
8NDF2_MOUSE (Q62414) Neurogenic differentiation factor 2 (NeuroD2... 31 2.4
9ATG12_PONPY (Q5R7W1) Autophagy-related protein 12 (APG12-like) 31 2.4
10MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substra... 31 2.4
11Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/E... 31 3.2
12GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region ge... 31 3.2
13Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/E... 31 3.2
14MUTS_BACSK (Q5WFY3) DNA mismatch repair protein mutS 30 4.2
15LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor 30 4.2
16CHIC1_MOUSE (Q8CBW7) Cysteine-rich hydrophobic domain 1 protein ... 30 4.2
17YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65) 30 5.4
18ATG12_HUMAN (O94817) Autophagy-related protein 12 (APG12-like) 30 5.4
19POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48) 29 9.3
20MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in... 29 9.3
21TBCD5_HUMAN (Q92609) TBC1 domain family member 5 29 9.3
22MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate... 29 9.3

>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = -1

Query: 600  PVHEVMHVXYVALLCTEEHSVQRPTMREVVQILSELPKPAAS 475
            P+  V+HV  +A++C EE +  RPTMREVV +L+  PK  A+
Sbjct: 935  PLTSVIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSVAN 976



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -1

Query: 591 EVMHVXYVALLCTEEHSVQRPTMREVVQILSELPKPAASQGDGEEE 454
           EV  +  VALLCT+   ++RP M EVV++L         +GDG  E
Sbjct: 534 EVEQLIQVALLCTQSSPMERPKMSEVVRML---------EGDGLAE 570



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -1

Query: 591  EVMHVXYVALLCTEEHSVQRPTMREVVQILSEL 493
            E+  V ++ LLCT    + RP+MR+VV +L E+
Sbjct: 935  EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEV 967



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>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 492 PKPAASQGDGEEELPLS-GDGPESNPXAPTSSSTEAP 385
           P P  SQG+G ++ P   GDGPE  P  P +     P
Sbjct: 47  PPPEESQGEGHQKRPRPPGDGPEQGPAPPGARPPPGP 83



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>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1

Query: 570 VALLCTEEHSVQRPTMREVVQILSEL 493
           +AL CTE  S QRPTM +VV  L ++
Sbjct: 820 IALACTEHTSAQRPTMSQVVMELKQI 845



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>ELK1_MOUSE (P41969) ETS domain-containing protein Elk-1|
          Length = 429

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -1

Query: 501 SELPKPAASQGDGEEELPLS-----GDGPESNPXAPTSSSTEAP 385
           +E+ +P   +   + ELPLS     G GPE  P + TSS  +AP
Sbjct: 306 TEITQPQKGRKPRDLELPLSPSLLGGQGPERTPGSGTSSGLQAP 349



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>NDF2_RAT (Q63689) Neurogenic differentiation factor 2 (NeuroD2) (Brain bHLH|
           protein KW8)
          Length = 382

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -1

Query: 507 ILSELPKPAASQGDGEEELPLS--GDGPESNPXAPTSSS 397
           +LS++PK  AS GDG+++ P S  GD P   P AP S +
Sbjct: 11  LLSDVPK-FASWGDGDDDEPRSDKGDAPPQPPPAPGSGA 48



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>NDF2_MOUSE (Q62414) Neurogenic differentiation factor 2 (NeuroD2)|
           (NeuroD-related factor) (NDRF)
          Length = 383

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -1

Query: 507 ILSELPKPAASQGDGEEELPLS--GDGPESNPXAPTSSS 397
           +LS++PK  AS GDG+++ P S  GD P   P AP S +
Sbjct: 11  LLSDVPK-FASWGDGDDDEPRSDKGDAPPQPPPAPGSGA 48



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>ATG12_PONPY (Q5R7W1) Autophagy-related protein 12 (APG12-like)|
          Length = 140

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 525 MREVVQILSELPKPAASQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAK 370
           M E  Q + +LP  +A+ G+G  ++      PE    A  S  TE P G+ K
Sbjct: 1   MAEEPQTVLQLPPSSAAGGEGLTDVSPETTTPEPPSSAAVSPGTEEPAGDTK 52



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>MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
          Length = 308

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 486 PAASQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAKD 367
           PAA++   +EEL  +G  P ++   P S S   P    KD
Sbjct: 46  PAAAEPGAKEELQANGSAPAADKEEPASGSAATPAAAEKD 85



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>Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120|
          Length = 207

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 132 PTLQAAKQSTKHTHTHTPNWKS*TPHHESSLDMYNTATNSFTPQTLDSGL 281
           P  +  K  T+  HTH  N +  T H E+      T+T   TP T+ S L
Sbjct: 67  PPKKKKKNHTEGCHTHEANPEPNTKHTETESPKPQTSTQHHTPITIPSSL 116



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>GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region gene 2 protein|
           (p60)
          Length = 478

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = -1

Query: 570 VALLCTEEHSVQRPTMREVVQILSELPKPAASQGDGEEELPLSGDGPESNPXAPTSSSTE 391
           +AL  TE+ + Q  T +E+ + L E      S G+GE   P  G+GPE+       +   
Sbjct: 279 LALPATEQAATQESTFQELCEGLLE-----ESDGEGE---PGQGEGPEAGDAEVCPTPAR 330

Query: 390 APTGNAKDHQQQ 355
             T   K  QQ+
Sbjct: 331 LATTEKKTEQQR 342



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>Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/ECU07_0010|
          Length = 238

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 132 PTLQAAKQSTKHTHTHTPNWKS*TPHHESSLDMYNTATNSFTPQTLDSGL 281
           P  +  K  T+  HTH  N +  T H E+      T+T   TP T+ S L
Sbjct: 98  PPKKKKKNHTEGCHTHEANPEPNTKHTETESPKPQTSTQHHTPITIPSSL 147



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>MUTS_BACSK (Q5WFY3) DNA mismatch repair protein mutS|
          Length = 871

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -1

Query: 567 ALLCTEEHSVQRPTMREVVQILSELPKPAASQGDGEEELPLSGDGPESNPXAPT 406
           ALL   EH  QRPT   V Q +       A+  +  ++L L     E+ P  PT
Sbjct: 782 ALLTELEHLPQRPTSASVEQPVDSAKTETAATAEEPQQLSLFPTDEETKPKQPT 835



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>LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor|
          Length = 212

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 221 LGYVQHSNKFFHSTNPRFRPRLAPACLDDQMLMRSGGGD-DSELVCCC 361
           +G  + S  F HS  P   PRL   C  D M M++ G   D+  V  C
Sbjct: 14  IGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMNC 61



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>CHIC1_MOUSE (Q8CBW7) Cysteine-rich hydrophobic domain 1 protein (Brain X-linked|
           protein)
          Length = 227

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 477 SQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAKDHQQQ 355
           S+ + EEE   S   P S+P + +SSS   P  + +D +++
Sbjct: 15  SELEEEEEAATSSSSPSSSPSSSSSSSVSGPDEDEEDEEEE 55



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>YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65)|
          Length = 454

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = -1

Query: 492 PKPAASQGDGEE-ELPLSGDGPESNPXAPTSSSTE-APTGNAKDHQQQH 352
           P   A QG G+    P  G GP S P  P  ++T+ AP      HQ  H
Sbjct: 8   PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVH 56



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>ATG12_HUMAN (O94817) Autophagy-related protein 12 (APG12-like)|
          Length = 140

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 525 MREVVQILSELPKPAASQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAK 370
           M E  Q + +LP   A+ G+G  ++      PE    A  S  TE P G+ K
Sbjct: 1   MAEEPQSVLQLPTSIAAGGEGLTDVSPETTTPEPPSSAAVSPGTEEPAGDTK 52



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>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1874

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 492 PKPAASQGDGEEELPLSGDGPES-NPXAPTSSSTEAPTGN 376
           P P++S G        S D P + N   PTSSST  P+ N
Sbjct: 674 PNPSSSAGSNPPPKSSSSDNPPAPNKPTPTSSSTTPPSPN 713



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>MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in metastasis|
           protein)
          Length = 759

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 540 VQRPTMREVVQILSELPKPAASQGDGEEELPLSGDGPESNPXAPTSS-STEAP 385
           V+ PT+ ++  +L   P     +G+   E P +G+GP+     P+S  S +AP
Sbjct: 622 VKTPTVPDLPGVLPSPPDGPEERGEHSPESPSAGEGPQGVSNIPSSLWSGQAP 674



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>TBCD5_HUMAN (Q92609) TBC1 domain family member 5|
          Length = 795

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 498 ELPKPAASQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAKDHQQQ 355
           +L  PA + G     +P       S+   PT +S EAP+ + +  QQQ
Sbjct: 467 KLISPAMAPGSAGGPVPGGNSSSSSSVVIPTRTSAEAPSHHLQQQQQQ 514



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>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (Protein kinase C substrate 80 kDa protein)
          Length = 308

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 486 PAASQGDGEEELPLSGDGPESNPXAPTSSSTEAPTGNAKD 367
           PAA++   +EEL  +G  P ++   P S     P    KD
Sbjct: 46  PAAAEPGAKEELQANGSAPAADKEEPASGGAATPAAADKD 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,738,889
Number of Sequences: 219361
Number of extensions: 1434617
Number of successful extensions: 4804
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4780
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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