| Clone Name | rbags10e03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450589.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1271 Score = 325 bits (164), Expect = 1e-85 Identities = 275/312 (88%) Strand = Plus / Minus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 1127 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 1068 Query: 468 gattttgatctgggccctgtcgagaagcccatcagcttatggcatttggtgaatgacacg 527 | ||||||||| || ||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 1067 gcttttgatcttgggcctgttgagaagcccatcatcttatggcatttggtgaaggacaca 1008 Query: 528 ttgaaataagcaacaagagcatggatgaagtcgttacgctctgctaccaatttgaacggc 587 |||||||| ||||||||||||||||| |||| |||||||||||||| || || || || Sbjct: 1007 ttgaaataggcaacaagagcatggatatagtcattacgctctgctactaacttaaatggt 948 Query: 588 acagtaaatgacgcatccccagatgacatcttggaaatatccatagtctttagtaactga 647 || ||||| |||||||| |||| || ||| |||||||||||||| ||||| |||||||| Sbjct: 947 actgtaaaggacgcatctccaggtgtcattttggaaatatccattgtcttcagtaactgg 888 Query: 648 aagttagtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgt 707 |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 887 cagttagtgacaatctgatttgcatccaccgtatctacaagtggctccatcattgcctgt 828 Query: 708 ttcttaatacag 719 ||||| |||||| Sbjct: 827 ttcttgatacag 816 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 1267 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 1225
>dbj|AK099826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102P20, full insert sequence Length = 1492 Score = 325 bits (164), Expect = 1e-85 Identities = 275/312 (88%) Strand = Plus / Minus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 1128 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 1069 Query: 468 gattttgatctgggccctgtcgagaagcccatcagcttatggcatttggtgaatgacacg 527 | ||||||||| || ||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 1068 gcttttgatcttgggcctgttgagaagcccatcatcttatggcatttggtgaaggacaca 1009 Query: 528 ttgaaataagcaacaagagcatggatgaagtcgttacgctctgctaccaatttgaacggc 587 |||||||| ||||||||||||||||| |||| |||||||||||||| || || || || Sbjct: 1008 ttgaaataggcaacaagagcatggatatagtcattacgctctgctactaacttaaatggt 949 Query: 588 acagtaaatgacgcatccccagatgacatcttggaaatatccatagtctttagtaactga 647 || ||||| |||||||| |||| || ||| |||||||||||||| ||||| |||||||| Sbjct: 948 actgtaaaggacgcatctccaggtgtcattttggaaatatccattgtcttcagtaactgg 889 Query: 648 aagttagtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgt 707 |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 888 cagttagtgacaatctgatttgcatccaccgtatctacaagtggctccatcattgcctgt 829 Query: 708 ttcttaatacag 719 ||||| |||||| Sbjct: 828 ttcttgatacag 817 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 1268 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 1226
>gb|AY104437.1| Zea mays PCO143566 mRNA sequence Length = 997 Score = 224 bits (113), Expect = 3e-55 Identities = 257/305 (84%) Strand = Plus / Minus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 ||||||| ||||| |||| |||||||| || || |||||||| ||||||||||||||| Sbjct: 577 tccccctgacagatagttataacatcctccaggtagagaacagtttgcttccagtgagtg 518 Query: 468 gattttgatctgggccctgtcgagaagcccatcagcttatggcatttggtgaatgacacg 527 | ||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 517 gctttcgatctcgggcctgttgagaagcccatcagcttatggcatttggtgaacgacacg 458 Query: 528 ttgaaataagcaacaagagcatggatgaagtcgttacgctctgctaccaatttgaacggc 587 | ||| || || ||||||||||| ||| | || || ||||||||||||| ||||| || Sbjct: 457 tcgaagtatgcgacaagagcatgaatgtaatcattccgctctgctaccagcttgaatggt 398 Query: 588 acagtaaatgacgcatccccagatgacatcttggaaatatccatagtctttagtaactga 647 |||||||| ||| | || || | | ||| ||||| |||||||| ||||| |||||||| Sbjct: 397 acagtaaaggacacgtcacctggggtcattttggagatatccattgtcttcagtaactgg 338 Query: 648 aagttagtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgt 707 |||||||||| ||||||||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 337 cagttagtgacaatctgatttgcatccactgtatctaccagtggctccatcatcgcctgt 278 Query: 708 ttctt 712 ||||| Sbjct: 277 ttctt 273 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 277 gtcatcgcatcttgtagtgttgtgttctagacaccttgcacctattgccatttatggcgt 336 |||| |||||||||||| |||||||| || |||| ||||||| |||||||||| || Sbjct: 708 gtcaccgcatcttgtagaactgtgttcttgatacctgacacctatgcccatttatggagt 649 Query: 337 atttcagcgtaatgtcgatgtctcgagggtt 367 | || ||| |||||||||| ||||||||||| Sbjct: 648 acttgagcttaatgtcgatatctcgagggtt 618
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 6e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 483 cctgtcgagaagcccatcagcttatggcatttggtgaatgacacgttgaaataagcaaca 542 ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||| |||||| Sbjct: 11649739 cctgttgagaagcccatcatcttatggcatttggtgaaggacacattgaaataggcaaca 11649798 Query: 543 agagcatggatgaagtcgttacgctctgctaccaatttgaacggcacagtaaatgacgca 602 ||||||||||| |||| |||||||||||||| || || || || || ||||| |||||| Sbjct: 11649799 agagcatggatatagtcattacgctctgctactaacttaaatggtactgtaaaggacgca 11649858 Query: 603 tccccagatgacatcttggaaatatccatagtct 636 || |||| || ||| |||||||||||||| |||| Sbjct: 11649859 tctccaggtgtcattttggaaatatccattgtct 11649892 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 639 agtaactgaaagttagtgacgatctgattttgatccacagtatctacaagtggctccatc 698 |||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||| Sbjct: 11649988 agtaactggcagttagtgacaatctgatttgcatccaccgtatctacaagtggctccatc 11650047 Query: 699 attgcctgtttcttaatacag 719 |||||||||||||| |||||| Sbjct: 11650048 attgcctgtttcttgatacag 11650068 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 11649569 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 11649628 Query: 468 gattttgatct 478 | ||||||||| Sbjct: 11649629 gcttttgatct 11649639 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 11649429 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 11649471
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 147 bits (74), Expect = 6e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 483 cctgtcgagaagcccatcagcttatggcatttggtgaatgacacgttgaaataagcaaca 542 ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||| |||||| Sbjct: 165746 cctgttgagaagcccatcatcttatggcatttggtgaaggacacattgaaataggcaaca 165805 Query: 543 agagcatggatgaagtcgttacgctctgctaccaatttgaacggcacagtaaatgacgca 602 ||||||||||| |||| |||||||||||||| || || || || || ||||| |||||| Sbjct: 165806 agagcatggatatagtcattacgctctgctactaacttaaatggtactgtaaaggacgca 165865 Query: 603 tccccagatgacatcttggaaatatccatagtct 636 || |||| || ||| |||||||||||||| |||| Sbjct: 165866 tctccaggtgtcattttggaaatatccattgtct 165899 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 639 agtaactgaaagttagtgacgatctgattttgatccacagtatctacaagtggctccatc 698 |||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||| Sbjct: 165995 agtaactggcagttagtgacaatctgatttgcatccaccgtatctacaagtggctccatc 166054 Query: 699 attgcctgtttcttaatacag 719 |||||||||||||| |||||| Sbjct: 166055 attgcctgtttcttgatacag 166075 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 165576 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 165635 Query: 468 gattttgatct 478 | ||||||||| Sbjct: 165636 gcttttgatct 165646 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 165436 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 165478
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 147 bits (74), Expect = 6e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 483 cctgtcgagaagcccatcagcttatggcatttggtgaatgacacgttgaaataagcaaca 542 ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||| |||||| Sbjct: 84373 cctgttgagaagcccatcatcttatggcatttggtgaaggacacattgaaataggcaaca 84432 Query: 543 agagcatggatgaagtcgttacgctctgctaccaatttgaacggcacagtaaatgacgca 602 ||||||||||| |||| |||||||||||||| || || || || || ||||| |||||| Sbjct: 84433 agagcatggatatagtcattacgctctgctactaacttaaatggtactgtaaaggacgca 84492 Query: 603 tccccagatgacatcttggaaatatccatagtct 636 || |||| || ||| |||||||||||||| |||| Sbjct: 84493 tctccaggtgtcattttggaaatatccattgtct 84526 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 639 agtaactgaaagttagtgacgatctgattttgatccacagtatctacaagtggctccatc 698 |||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||| Sbjct: 84622 agtaactggcagttagtgacaatctgatttgcatccaccgtatctacaagtggctccatc 84681 Query: 699 attgcctgtttcttaatacag 719 |||||||||||||| |||||| Sbjct: 84682 attgcctgtttcttgatacag 84702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 84203 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 84262 Query: 468 gattttgatct 478 | ||||||||| Sbjct: 84263 gcttttgatct 84273 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 84063 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 84105
>dbj|AK059689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A12, full insert sequence Length = 556 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 408 tccccctcgcagatggttactacatcctcgagatacagaacagtctgcttccagtgagtg 467 |||||||| |||||||| | ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 127 tccccctcacagatggtcagtacatcctccaggtacagaacagtttgcttccagtgagtg 68 Query: 468 gattttgatct 478 | ||||||||| Sbjct: 67 gcttttgatct 57 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 268 ctcgcattggtcatcgcatcttgtagtgttgtgttctagacac 310 ||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 267 ctcgcattgatcaccgcatcttgtagtgttgtgttcttgacac 225
>gb|BT014168.1| Lycopersicon esculentum clone 133304R, mRNA sequence Length = 1575 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 600 gcatccccagatgacatcttggaaatatccatagtctttagtaactgaaagttagtgacg 659 ||||||||||| | |||||| ||||| ||||| ||||| |||||||| |||| |||||| Sbjct: 954 gcatccccagaagtcatcttcgaaatgtccatcgtcttcagtaactggcagttggtgacg 895 Query: 660 atctgattttgatc 673 |||||||| ||||| Sbjct: 894 atctgattctgatc 881
>gb|AF094698.1|AF094698 Sphoeroides nephelus immune-type receptor 1-5, 7 and 9-26 genes, complete cds and immune-type receptor 6 and 8, pseudogenes, complete sequence Length = 113426 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 acaaatatcattttttgtgaaa 215 |||||||||||||||||||||| Sbjct: 43740 acaaatatcattttttgtgaaa 43719
>ref|NM_117203.3| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT4G11320 mRNA, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 122 gcattggtcatcgcatcttgt 142
>ref|NM_119096.2| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase/ protein-arginine N-methyltransferase AT4G29510 mRNA, complete cds Length = 1536 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1217 atgtcaatgtctcgaggattcttcttgtt 1189 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 911 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 852 Query: 714 ataca 718 ||||| Sbjct: 851 ataca 847
>gb|DQ226552.1| Boechera divaricarpa isolate SLW-1-D06 mRNA sequence Length = 380 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 287 atgtcaatgtctcgaggattcttcttgtt 315
>emb|CR936975.9| Zebrafish DNA sequence from clone CH211-195B15 in linkage group 3, complete sequence Length = 121737 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 117852 acagtctgcttccagtgagtg 117832
>emb|AJ007582.1|ATH7582 Arabidopsis thaliana mRNA for arginine methyltransferase Length = 1393 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1149 atgtcaatgtctcgaggattcttcttgtt 1121 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 843 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 784 Query: 714 ataca 718 ||||| Sbjct: 783 ataca 779
>ref|XM_504098.1| Yarrowia lipolytica CLIB122, YALI0E18282g predicted mRNA Length = 981 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 818 acagtctgcttccagtgagtg 798
>gb|AY150407.1| Arabidopsis thaliana arginine methyltransferase pam1 (At4g29510) mRNA, complete cds Length = 1204 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1103 atgtcaatgtctcgaggattcttcttgtt 1075 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 797 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 738 Query: 714 ataca 718 ||||| Sbjct: 737 ataca 733
>gb|AY063970.1| Arabidopsis thaliana putative arginine methyltransferase pam1 (At4g29510) mRNA, complete cds Length = 1381 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1156 atgtcaatgtctcgaggattcttcttgtt 1128
>gb|AY051062.1| Arabidopsis thaliana putative cysteine proteinase (At4g11320) mRNA, complete cds Length = 1147 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 40 gcattggtcatcgcatcttgt 60
>gb|AY035055.1| Arabidopsis thaliana putative cysteine proteinase (At4g11320) mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 122 gcattggtcatcgcatcttgt 142
>emb|AL079344.1|ATT16L4 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L4 (ESSA project) Length = 88011 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 3518 atgtcaatgtctcgaggattcttcttgtt 3490 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 2961 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 2902 Query: 714 ataca 718 ||||| Sbjct: 2901 ataca 2897
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 28333 atgtcaatgtctcgaggattcttcttgtt 28305 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 27776 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 27717 Query: 714 ataca 718 ||||| Sbjct: 27716 ataca 27712
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 131613 gcattggtcatcgcatcttgt 131633
>emb|AL096882.2|ATF8L21 Arabidopsis thaliana DNA chromosome 4, BAC clone F8L21 (ESSA project) Length = 98948 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 58607 gcattggtcatcgcatcttgt 58627
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 tggcatttggtgaatgacacg 527 ||||||||||||||||||||| Sbjct: 123489 tggcatttggtgaatgacacg 123509
>gb|BC057480.1| Danio rerio protein arginine methyltransferase 1, mRNA (cDNA clone MGC:66201 IMAGE:5914106), complete cds Length = 2298 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 921 acagtctgcttccagtgagtg 901
>gb|BC044522.1| Danio rerio protein arginine methyltransferase 1, mRNA (cDNA clone IMAGE:3818573), partial cds Length = 2353 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 970 acagtctgcttccagtgagtg 950
>ref|NM_200650.1| Danio rerio protein arginine methyltransferase 1 (prmt1), mRNA Length = 2298 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 921 acagtctgcttccagtgagtg 901
>emb|BX828261.1|CNS0A4F1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH69ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1260 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1129 atgtcaatgtctcgaggattcttcttgtt 1101 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 823 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 764 Query: 714 ataca 718 ||||| Sbjct: 763 ataca 759
>emb|BX827302.1|CNS0A4C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1322 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1137 atgtcaatgtctcgaggattcttcttgtt 1109 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 831 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 772 Query: 714 ataca 718 ||||| Sbjct: 771 ataca 767
>emb|BX827844.1|CNS0A31A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 105 gcattggtcatcgcatcttgt 125
>emb|BX827227.1|CNS0A2UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1361 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 102 gcattggtcatcgcatcttgt 122
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 agtctgcttccagtgagtgga 469 ||||||||||||||||||||| Sbjct: 73869 agtctgcttccagtgagtgga 73889
>gb|AY089180.1| Arabidopsis thaliana clone 6307 mRNA, complete sequence Length = 1370 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gcattggtcatcgcatcttgt 291 ||||||||||||||||||||| Sbjct: 121 gcattggtcatcgcatcttgt 141
>gb|AY087817.1| Arabidopsis thaliana clone 38601 mRNA, complete sequence Length = 1435 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 atgtcgatgtctcgagggttcttcttgtt 376 ||||| ||||||||||| ||||||||||| Sbjct: 1217 atgtcaatgtctcgaggattcttcttgtt 1189 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 654 gtgacgatctgattttgatccacagtatctacaagtggctccatcattgcctgtttctta 713 |||||||| || ||||| || || || || |||||||| |||||||| || | ||||||| Sbjct: 911 gtgacgatttggttttggtcgactgtgtcaacaagtggttccatcatagcttttttctta 852 Query: 714 ataca 718 ||||| Sbjct: 851 ataca 847
>ref|XM_575676.1| PREDICTED: Rattus norvegicus similar to HMT1 hnRNP methyltransferase-like 3 protein (LOC500325), mRNA Length = 4095 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 3926 acagtctgcttccagtgagtg 3906
>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete sequence Length = 205302 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 atcattttttgtgaaacacaa 220 ||||||||||||||||||||| Sbjct: 109902 atcattttttgtgaaacacaa 109922
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 acagtctgcttccagtgagtg 467 ||||||||||||||||||||| Sbjct: 2185852 acagtctgcttccagtgagtg 2185872
>gb|AC149880.2| Xenopus tropicalis clone CH216-6G14, complete sequence Length = 200980 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 527 gttgaaataagcaacaagagcatggatg 554 ||||||||||||||| || ||||||||| Sbjct: 71649 gttgaaataagcaactagtgcatggatg 71676
>gb|BC074614.1| Xenopus tropicalis HMT1 hnRNP methyltransferase-like 2 (S. cerevisiae), mRNA (cDNA clone MGC:69475 IMAGE:5336129), complete cds Length = 2000 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 527 gttgaaataagcaacaagagcatggatg 554 ||||||||||||||| || ||||||||| Sbjct: 861 gttgaaataagcaactagtgcatggatg 834
>gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complete sequence Length = 143369 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 tagtaactgaaagttagtga 657 |||||||||||||||||||| Sbjct: 91469 tagtaactgaaagttagtga 91450
>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete sequence Length = 209619 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ggaacaaatatcattttttgtgaa 214 ||||||| |||||||||||||||| Sbjct: 47171 ggaacaactatcattttttgtgaa 47148
>emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in linkage group 18, complete sequence Length = 197565 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tgaatgacacgttgaaataa 536 |||||||||||||||||||| Sbjct: 19117 tgaatgacacgttgaaataa 19098
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 acaacacaagatagatttgcaaca 99 ||||||||||||||||||| |||| Sbjct: 112860 acaacacaagatagatttgtaaca 112837
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ggaacaaatatcattttttgtgaa 214 ||||||| |||||||||||||||| Sbjct: 116919 ggaacaactatcattttttgtgaa 116896
>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the gene for a novel protein (FLJ31208), three novel genes, a novel pseudogene and three CpG islands, complete sequence Length = 178850 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcagcttatggcatttggtg 518 |||||||||||||||||||| Sbjct: 162184 tcagcttatggcatttggtg 162203
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ctactttctactttgttgcc 150 |||||||||||||||||||| Sbjct: 3497682 ctactttctactttgttgcc 3497663
>ref|NM_001005629.1| Xenopus tropicalis HMT1 hnRNP methyltransferase-like 2 (S. cerevisiae) (hrmt1l2), mRNA Length = 2000 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 527 gttgaaataagcaacaagagcatggatg 554 ||||||||||||||| || ||||||||| Sbjct: 861 gttgaaataagcaactagtgcatggatg 834
>gb|AF222718.1| Chrysodidymus synuroideus mitochondrion, complete genome Length = 34119 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gtttaaaatacaagacccga 190 |||||||||||||||||||| Sbjct: 670 gtttaaaatacaagacccga 689
>dbj|AK079351.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630038E05 product:unclassifiable, full insert sequence Length = 2608 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctactttgttgcctaggtg 156 |||||||||||||||||||| Sbjct: 654 tctactttgttgcctaggtg 673
>emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 in linkage group 18, complete sequence Length = 189723 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tgaatgacacgttgaaataa 536 |||||||||||||||||||| Sbjct: 151874 tgaatgacacgttgaaataa 151893
>emb|CR762238.2| Xenopus tropicalis finished cDNA, clone TGas059i20 Length = 1948 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 527 gttgaaataagcaacaagagcatggatg 554 ||||||||||||||| || ||||||||| Sbjct: 839 gttgaaataagcaactagtgcatggatg 812
>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete sequence Length = 158861 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tctactttgttgcctaggtg 156 |||||||||||||||||||| Sbjct: 154043 tctactttgttgcctaggtg 154024 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,191,804 Number of Sequences: 3902068 Number of extensions: 6191804 Number of successful extensions: 110649 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110446 Number of HSP's gapped (non-prelim): 202 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)