ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191361.1| Oryza sativa (japonica cultivar-group), predic... 299 6e-78
2dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
3gb|AY103806.1| Zea mays PCO111734 mRNA sequence 242 1e-60
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
5dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
7gb|AY108586.1| Zea mays PCO142466 mRNA sequence 56 2e-04
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 2e-04
9emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 56 2e-04
10emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 56 2e-04
11dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
12emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f1... 54 6e-04
13gb|DQ166527.1| Fagus sylvatica putative chorismate mutase mRNA, ... 50 0.010
14emb|AJ004916.1|PAJ004916 Prunus avium L. mRNA for chorismate mut... 48 0.040
15ref|XM_504065.1| Yarrowia lipolytica CLIB122, YALI0E17479g predi... 46 0.16
16gb|U63926.1|FRU63926 Fugu rubripes platelet-derived growth facto... 46 0.16
17emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 46 0.16
18ref|XM_482629.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.62
19gb|AY389761.1| Hyacinthus orientalis chorismate mutase mRNA, par... 44 0.62
20dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.62
21ref|XM_422062.1| PREDICTED: Gallus gallus similar to mKIAA0236 p... 42 2.4
22gb|AC140307.3| Mus musculus BAC clone RP23-389D15 from chromosom... 42 2.4
23gb|AC109619.11| Mus musculus chromosome 19, clone RP23-427F6, co... 42 2.4
24gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 42 2.4
25dbj|AB182997.1| Nicotiana tabacum cm mRNA for chorismate mutase,... 42 2.4
26ref|XM_364531.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 9.7
27ref|XM_367046.1| Magnaporthe grisea 70-15 chromosome V hypotheti... 40 9.7
28gb|BC003858.1| Mus musculus methylthioadenosine phosphorylase, m... 40 9.7
29gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, co... 40 9.7
30emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chr... 40 9.7
31emb|BX284672.11| Zebrafish DNA sequence from clone DKEY-88N24 in... 40 9.7
32emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 40 9.7
33gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Canc... 40 9.7
34gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence 40 9.7
35gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 9.7
36dbj|AK167319.1| Mus musculus 12 days pregnant adult female place... 40 9.7
37gb|AC140319.3| Mus musculus BAC clone RP23-413L6 from chromosome... 40 9.7
38dbj|AK005064.1| Mus musculus adult male liver cDNA, RIKEN full-l... 40 9.7
39dbj|AK089916.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN f... 40 9.7
40dbj|AK011421.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 9.7
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
42gb|AC004904.1|AC004904 Homo sapiens PAC clone RP5-828F13 from 1,... 40 9.7
43ref|XM_215777.2| PREDICTED: Rattus norvegicus similar to PR-doma... 40 9.7
44gb|AC025613.14|AC025613 Homo sapiens chromosome 3 clone RP11-514... 40 9.7
45gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosom... 40 9.7
46emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chro... 40 9.7
47emb|AL831719.6| Mouse DNA sequence from clone RP23-166I8 on chro... 40 9.7
48gb|AC145294.4| Mus musculus BAC clone RP23-88B16 from 7, complet... 40 9.7
49gb|AC153840.6| Mus musculus 10 BAC RP23-271A22 (Roswell Park Can... 40 9.7
50gb|AC149596.2| Mus musculus BAC clone RP24-424J20 from 7, comple... 40 9.7
51gb|AC132571.2| Mus musculus BAC clone RP24-539E18 from 1, comple... 40 9.7
52ref|NM_024433.1| Mus musculus methylthioadenosine phosphorylase ... 40 9.7
53gb|AF012867.1|AF012867 Petroselinum crispum cytosolic chorismate... 40 9.7
54gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Can... 40 9.7
55dbj|AB056100.1| Mus musculus mtap mRNA for methylthioadenosine p... 40 9.7 
>ref|NM_191361.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 885

 Score =  299 bits (151), Expect = 6e-78
 Identities = 307/357 (85%), Gaps = 4/357 (1%)
 Strand = Plus / Minus

                                                                       
Query: 353 ctccttagcaagtatgctacctggacgtccttggttagcggcatgatcctgttgctgtac 412
           ||||| |||||||| ||||| || || ||||||||||||||||||||||||| |||||||
Sbjct: 875 ctcctcagcaagtaggctacttgaacctccttggttagcggcatgatcctgtagctgtac 816

                                                                       
Query: 413 agtccagcgaccaggctgggcctgatcttgtacacaggcat---gcccttggcttcagct 469
           ||| |||| ||||  |||||||| ||||||||||  ||      ||| ||| ||||||| 
Sbjct: 815 agttcagccaccaaactgggccttatcttgtacattggtggagcgccgttgtcttcagcg 756

                                                                       
Query: 470 cctatgttcacctcctgtccaaatatcttagccttggtttccacccgatgttcgatggca 529
           ||||  | ||||||||||||||| ||||||||||| | |||||||| |||||| || |||
Sbjct: 755 cctaaatccacctcctgtccaaagatcttagccttagcttccaccctatgttcaatagca 696

                                                                       
Query: 530 cgctcgaccgtctcgtaggtgaggagctgcattagttgatcaccgtcctgagcttttatt 589
           ||||| ||||| || ||||||||||| |||||||||||||| | |||||| ||| |||| 
Sbjct: 695 cgctccaccgtttcataggtgaggaggtgcattagttgatcgcagtcctgtgctattatc 636

                                                                       
Query: 590 gcaggtgtgtaagcttcaggggactcttgaaacttggcctctgccacaaacttcccatag 649
           |||||  ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 635 gcaggcatgtaagcttcaggagactcttgaaacttagcctctgccacaaacttaccatag 576

                                                                    
Query: 650 tggattcttttagagagtgcctgcaagcaaggtcgtgtcacaaagagcactggatcc 706
           || |||||||| ||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 575 tgaattcttttggagagcgcctgcaagc-agatcgtgtcacaaagagcactggatcc 520
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>dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001N13, full
            insert sequence
          Length = 1250

 Score =  299 bits (151), Expect = 6e-78
 Identities = 307/357 (85%), Gaps = 4/357 (1%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctccttagcaagtatgctacctggacgtccttggttagcggcatgatcctgttgctgtac 412
            ||||| |||||||| ||||| || || ||||||||||||||||||||||||| |||||||
Sbjct: 1022 ctcctcagcaagtaggctacttgaacctccttggttagcggcatgatcctgtagctgtac 963

                                                                        
Query: 413  agtccagcgaccaggctgggcctgatcttgtacacaggcat---gcccttggcttcagct 469
            ||| |||| ||||  |||||||| ||||||||||  ||      ||| ||| ||||||| 
Sbjct: 962  agttcagccaccaaactgggccttatcttgtacattggtggagcgccgttgtcttcagcg 903

                                                                        
Query: 470  cctatgttcacctcctgtccaaatatcttagccttggtttccacccgatgttcgatggca 529
            ||||  | ||||||||||||||| ||||||||||| | |||||||| |||||| || |||
Sbjct: 902  cctaaatccacctcctgtccaaagatcttagccttagcttccaccctatgttcaatagca 843

                                                                        
Query: 530  cgctcgaccgtctcgtaggtgaggagctgcattagttgatcaccgtcctgagcttttatt 589
            ||||| ||||| || ||||||||||| |||||||||||||| | |||||| ||| |||| 
Sbjct: 842  cgctccaccgtttcataggtgaggaggtgcattagttgatcgcagtcctgtgctattatc 783

                                                                        
Query: 590  gcaggtgtgtaagcttcaggggactcttgaaacttggcctctgccacaaacttcccatag 649
            |||||  ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 782  gcaggcatgtaagcttcaggagactcttgaaacttagcctctgccacaaacttaccatag 723

                                                                     
Query: 650  tggattcttttagagagtgcctgcaagcaaggtcgtgtcacaaagagcactggatcc 706
            || |||||||| ||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 722  tgaattcttttggagagcgcctgcaagc-agatcgtgtcacaaagagcactggatcc 667
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>gb|AY103806.1| Zea mays PCO111734 mRNA sequence
          Length = 1222

 Score =  242 bits (122), Expect = 1e-60
 Identities = 308/368 (83%), Gaps = 4/368 (1%)
 Strand = Plus / Minus

                                                                       
Query: 342 ctcagtccagcctccttagcaagtatgctacctggacgtccttggttagcggcatgatcc 401
           |||| ||||||||| | |||||||| || ||||  || |||||||||||||||||||| |
Sbjct: 999 ctcaatccagcctcttaagcaagtacgcgacctcaacctccttggttagcggcatgattc 940

                                                                       
Query: 402 tgttgctgtacagtccagcgaccaggctgggcctgatcttgtacacaggca---tgccct 458
           ||| |||||||||  | ||||||| ||| |||||||| ||||| || ||     |||| |
Sbjct: 939 tgtagctgtacagctcggcgaccaagctcggcctgattttgtagaccggtgggctgccgt 880

                                                                       
Query: 459 tggcttcagctcctatgttcacctcctgtccaaatatcttagccttggtttccacccgat 518
           || | | ||| || ||||||||||| || || || ||||| || ||||  |||||||  |
Sbjct: 879 tgtccttagcaccaatgttcacctcttgcccgaagatcttggctttggcctccaccctgt 820

                                                                       
Query: 519 gttcgatggcacgctcgaccgtctcgtaggtgaggagctgcattagttgatcaccgtcct 578
           ||||||| |||||||| ||||| || || ||||| || | ||| |||||||||| ||| |
Sbjct: 819 gttcgatagcacgctccaccgtttcatatgtgagaaggttcatgagttgatcacggtctt 760

                                                                       
Query: 579 gagcttttattgcaggtgtgtaagcttcaggggactcttgaaacttggcctctgccacaa 638
           | ||| |||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gggctattatggctggcgtgtaagcttcaggggactcttgaaacttggcctctgccacaa 700

                                                                       
Query: 639 acttcccatagtggattcttttagagagtgcctgcaagcaaggtcgtgtcacaaagagca 698
           |||||||||||||||| ||| | |||||||||||||||| |||| |||||||||||||||
Sbjct: 699 acttcccatagtggatccttctggagagtgcctgcaagc-aggttgtgtcacaaagagca 641

                   
Query: 699 ctggatcc 706
           ||||||||
Sbjct: 640 ctggatcc 633
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 4e-36
 Identities = 194/231 (83%), Gaps = 3/231 (1%)
 Strand = Plus / Plus

                                                                            
Query: 353      ctccttagcaagtatgctacctggacgtccttggttagcggcatgatcctgttgctgtac 412
                ||||| |||||||| ||||| || || ||||||||||||||||||||||||| |||||||
Sbjct: 32165320 ctcctcagcaagtaggctacttgaacctccttggttagcggcatgatcctgtagctgtac 32165379

                                                                            
Query: 413      agtccagcgaccaggctgggcctgatcttgtacacaggcat---gcccttggcttcagct 469
                ||| |||| ||||  |||||||| ||||||||||  ||      ||| ||| ||||||| 
Sbjct: 32165380 agttcagccaccaaactgggccttatcttgtacattggtggagcgccgttgtcttcagcg 32165439

                                                                            
Query: 470      cctatgttcacctcctgtccaaatatcttagccttggtttccacccgatgttcgatggca 529
                ||||  | ||||||||||||||| ||||||||||| | |||||||| |||||| || |||
Sbjct: 32165440 cctaaatccacctcctgtccaaagatcttagccttagcttccaccctatgttcaatagca 32165499

                                                                   
Query: 530      cgctcgaccgtctcgtaggtgaggagctgcattagttgatcaccgtcctga 580
                ||||| ||||| || ||||||||||| |||||||||||||| | |||||||
Sbjct: 32165500 cgctccaccgtttcataggtgaggaggtgcattagttgatcgcagtcctga 32165550



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                            
Query: 576      cctgagcttttattgcaggtgtgtaagcttcaggggactcttgaaacttggcctctgcca 635
                |||| ||| |||| |||||  ||||||||||||| |||||||||||||| ||||||||||
Sbjct: 32165690 cctgtgctattatcgcaggcatgtaagcttcaggagactcttgaaacttagcctctgcca 32165749

                                                     
Query: 636      caaacttcccatagtggattcttttagagagtgcctg 672
                ||||||| |||||||| |||||||| ||||| |||||
Sbjct: 32165750 caaacttaccatagtgaattcttttggagagcgcctg 32165786



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                      
Query: 669      cctgcaagcaaggtcgtgtcacaaagagcactggatcc 706
                |||||||||| | |||||||||||||||||||||||||
Sbjct: 32166074 cctgcaagca-gatcgtgtcacaaagagcactggatcc 32166110
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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score =  161 bits (81), Expect = 4e-36
 Identities = 194/231 (83%), Gaps = 3/231 (1%)
 Strand = Plus / Plus

                                                                         
Query: 353   ctccttagcaagtatgctacctggacgtccttggttagcggcatgatcctgttgctgtac 412
             ||||| |||||||| ||||| || || ||||||||||||||||||||||||| |||||||
Sbjct: 36073 ctcctcagcaagtaggctacttgaacctccttggttagcggcatgatcctgtagctgtac 36132

                                                                         
Query: 413   agtccagcgaccaggctgggcctgatcttgtacacaggcat---gcccttggcttcagct 469
             ||| |||| ||||  |||||||| ||||||||||  ||      ||| ||| ||||||| 
Sbjct: 36133 agttcagccaccaaactgggccttatcttgtacattggtggagcgccgttgtcttcagcg 36192

                                                                         
Query: 470   cctatgttcacctcctgtccaaatatcttagccttggtttccacccgatgttcgatggca 529
             ||||  | ||||||||||||||| ||||||||||| | |||||||| |||||| || |||
Sbjct: 36193 cctaaatccacctcctgtccaaagatcttagccttagcttccaccctatgttcaatagca 36252

                                                                
Query: 530   cgctcgaccgtctcgtaggtgaggagctgcattagttgatcaccgtcctga 580
             ||||| ||||| || ||||||||||| |||||||||||||| | |||||||
Sbjct: 36253 cgctccaccgtttcataggtgaggaggtgcattagttgatcgcagtcctga 36303



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                         
Query: 576   cctgagcttttattgcaggtgtgtaagcttcaggggactcttgaaacttggcctctgcca 635
             |||| ||| |||| |||||  ||||||||||||| |||||||||||||| ||||||||||
Sbjct: 36443 cctgtgctattatcgcaggcatgtaagcttcaggagactcttgaaacttagcctctgcca 36502

                                                  
Query: 636   caaacttcccatagtggattcttttagagagtgcctg 672
             ||||||| |||||||| |||||||| ||||| |||||
Sbjct: 36503 caaacttaccatagtgaattcttttggagagcgcctg 36539



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                   
Query: 669   cctgcaagcaaggtcgtgtcacaaagagcactggatcc 706
             |||||||||| | |||||||||||||||||||||||||
Sbjct: 36827 cctgcaagca-gatcgtgtcacaaagagcactggatcc 36863
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 620      aacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaa 675
                ||||| |||||||||||| |||| |||||||| || || || ||||||||||||||
Sbjct: 23956217 aacttagcctctgccacatacttgccatagtgaatcctcttggagagtgcctgcaa 23956162
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>gb|AY108586.1| Zea mays PCO142466 mRNA sequence
          Length = 518

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 473 atgttcacctcctgtccaaatatcttagccttggtttccacccgatgttcgatggcacgc 532
           ||||||||||| || || || ||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 88  atgttcacctcttgcccgaagatcttggctttggcttccaccctatgttcgatagcacgc 29

                   
Query: 533 tcgaccgt 540
           || |||||
Sbjct: 28  tccaccgt 21



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 86/106 (81%)
 Strand = Plus / Minus

                                                                       
Query: 342 ctcagtccagcctccttagcaagtatgctacctggacgtccttggttagcggcatgatcc 401
           |||| ||||||||||| ||||| || || |  || || || ||||||||||||||||| |
Sbjct: 222 ctcaatccagcctcctaagcaaatacgcgatttgaacctctttggttagcggcatgattc 163

                                                         
Query: 402 tgttgctgtacagtccagcgaccaggctgggcctgatcttgtacac 447
           ||| |||||||||  | ||||||| ||| ||   ||||||||||||
Sbjct: 162 tgtagctgtacagctcggcgaccaagctcggaacgatcttgtacac 117
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 620      aacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaa 675
                ||||| |||||||||||| |||| |||||||| || || || ||||||||||||||
Sbjct: 23884423 aacttagcctctgccacatacttgccatagtgaatcctcttggagagtgcctgcaa 23884368
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 620   aacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaa 675
             ||||| |||||||||||| |||| |||||||| || || || ||||||||||||||
Sbjct: 16964 aacttagcctctgccacatacttgccatagtgaatcctcttggagagtgcctgcaa 17019
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>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                      
Query: 620    aacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaa 675
              ||||| |||||||||||| |||| |||||||| || || || ||||||||||||||
Sbjct: 131179 aacttagcctctgccacatacttgccatagtgaatcctcttggagagtgcctgcaa 131234
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>dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E07, full
           insert sequence
          Length = 1348

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 620 aacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgca 674
           ||||| |||||||||||| |||| |||||||| || || || |||||||||||||
Sbjct: 790 aacttagcctctgccacatacttgccatagtgaatcctcttggagagtgcctgca 736
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>emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f16, COMPLETE SEQUENCE
          Length = 109924

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 614  tcttgaaacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctg 672
            ||||||||||| ||||| || ||||| || |||||||||||||| || ||||| |||||
Sbjct: 1982 tcttgaaactttgcctcagcaacaaatttaccatagtggattctctttgagagagcctg 2040
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>gb|DQ166527.1| Fagus sylvatica putative chorismate mutase mRNA, complete cds
          Length = 1302

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 618 gaaacttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaagc 677
           |||| ||||||||||| ||||| || ||||| || |||||||| || || ||||||||||
Sbjct: 775 gaaatttggcctctgctacaaatttaccataatgcattctttttgacagagcctgcaagc 716

            
Query: 678 a 678
           |
Sbjct: 715 a 715
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>emb|AJ004916.1|PAJ004916 Prunus avium L. mRNA for chorismate mutase precursor
          Length = 394

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 635 acaaacttcccatagtggattcttttagagagtgcctgcaagca 678
           ||||| ||||||||||||||||| || || || |||||||||||
Sbjct: 278 acaaatttcccatagtggattctctttgacagagcctgcaagca 235
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>ref|XM_504065.1| Yarrowia lipolytica CLIB122, YALI0E17479g predicted mRNA
          Length = 771

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 618 gaaacttggcctctgccacaaacttcccatagtggattc 656
           ||||||||| ||| ||||||||||| ||| |||||||||
Sbjct: 502 gaaacttggactcggccacaaacttgccaaagtggattc 464
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>gb|U63926.1|FRU63926 Fugu rubripes platelet-derived growth factor receptor beta (PDGFRbeta)
             and macrophage colony-stimulating factor receptor (CSF1R)
             genes, complete cds
          Length = 23196

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 192   atagatgaaacaataaacgtgac 214
             |||||||||||||||||||||||
Sbjct: 19451 atagatgaaacaataaacgtgac 19473
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 618     gaaacttggcctctgccacaaacttcccatagtggattc 656
               ||||||||| ||| ||||||||||| ||| |||||||||
Sbjct: 2062700 gaaacttggactcggccacaaacttgccaaagtggattc 2062738
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>ref|XM_482629.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1043

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 629 tctgccacaaacttcccatagtggattcttttagagagtgcctgca 674
           ||||||||| || ||||||||| ||| ||| | |||||||||||||
Sbjct: 624 tctgccacatacctcccatagttgatccttcttgagagtgcctgca 579
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>gb|AY389761.1| Hyacinthus orientalis chorismate mutase mRNA, partial cds
          Length = 888

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 621 acttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaagca 678
           |||| ||||| |||||||| || || || || |||||||| ||||||||||| |||||
Sbjct: 502 actttgcctcggccacaaattttccgtaatgtattcttttggagagtgcctgtaagca 445
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>dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027D10, full
           insert sequence
          Length = 1043

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 629 tctgccacaaacttcccatagtggattcttttagagagtgcctgca 674
           ||||||||| || ||||||||| ||| ||| | |||||||||||||
Sbjct: 624 tctgccacatacctcccatagttgatccttcttgagagtgcctgca 579
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>ref|XM_422062.1| PREDICTED: Gallus gallus similar to mKIAA0236 protein (LOC424213),
            mRNA
          Length = 5463

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 305  acgaaggagcaggcattgcactgca 329
            |||||||||||||||||||| ||||
Sbjct: 4004 acgaaggagcaggcattgcagtgca 3980
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>gb|AC140307.3| Mus musculus BAC clone RP23-389D15 from chromosome 19, complete
            sequence
          Length = 187731

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 572  ccgtcctgagcttttattgca 592
            |||||||||||||||||||||
Sbjct: 1854 ccgtcctgagcttttattgca 1874
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>gb|AC109619.11| Mus musculus chromosome 19, clone RP23-427F6, complete sequence
          Length = 170072

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    ccgtcctgagcttttattgca 592
              |||||||||||||||||||||
Sbjct: 133438 ccgtcctgagcttttattgca 133458
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 580    agcttttattgcaggtgtgtaagct 604
              |||||||||||||||||| ||||||
Sbjct: 889448 agcttttattgcaggtgtataagct 889472
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>dbj|AB182997.1| Nicotiana tabacum cm mRNA for chorismate mutase, partial cds
          Length = 539

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 635 acaaacttcccatagtggattcttttagagagtgcctgcaa 675
           ||||| |||||||| || || ||| ||||||||||||||||
Sbjct: 284 acaaatttcccataatgaatccttctagagagtgcctgcaa 244
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>ref|XM_364531.1| Magnaporthe grisea 70-15 predicted protein (MG09395.4) partial mRNA
          Length = 2199

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 531 gctcgaccgtctcgtaggtg 550
           ||||||||||||||||||||
Sbjct: 394 gctcgaccgtctcgtaggtg 375
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>ref|XM_367046.1| Magnaporthe grisea 70-15 chromosome V hypothetical protein
           (MG10676.4) partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 tttgcaaacaccaacagcaa 122
           ||||||||||||||||||||
Sbjct: 377 tttgcaaacaccaacagcaa 358
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>gb|BC003858.1| Mus musculus methylthioadenosine phosphorylase, mRNA (cDNA clone
           MGC:6590 IMAGE:3485422), complete cds
          Length = 2565

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 693 tccagcctccttagcaagta 674
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>gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, complete sequence
          Length = 212928

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    agcaggcattgcactgcaca 331
              ||||||||||||||||||||
Sbjct: 161319 agcaggcattgcactgcaca 161338
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>emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chromosome 1 Contains
            the 5' end of a novel gene, the 3' end of a novel gene,
            the 3' end of the CD58 gene for CD58 antigen (lymphocyte
            function-associated antigen 3), a novel gene and the 3'
            end of a nucleosome assembly protein 1-like 4 (NAP1L4)
            pseudogene, complete sequence
          Length = 103611

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  gaaacaataaacgtgacaaa 217
            ||||||||||||||||||||
Sbjct: 2379 gaaacaataaacgtgacaaa 2360
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>emb|BX284672.11| Zebrafish DNA sequence from clone DKEY-88N24 in linkage group 20 Contains
              give genes for novel proteins with Lectin C-type domains,
              the gene for a novel protein similar to vertebrate NDRG
              (N-myc downregulated gene family) member 2 (NDGR2), two
              novel genes and two CpG islands, complete sequence
          Length = 149982

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    caaaaaactatatagatgaa 200
              ||||||||||||||||||||
Sbjct: 137847 caaaaaactatatagatgaa 137866
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>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aggcattgcactgcacattt 334
              ||||||||||||||||||||
Sbjct: 144545 aggcattgcactgcacattt 144526
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>gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 226233

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    aaaactatatagatgaaaca 203
              ||||||||||||||||||||
Sbjct: 169133 aaaactatatagatgaaaca 169152
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>gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence
          Length = 215342

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 617    tgaaacttggcctctgccac 636
              ||||||||||||||||||||
Sbjct: 199169 tgaaacttggcctctgccac 199188
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    agtccagcctccttagcaag 364
              ||||||||||||||||||||
Sbjct: 169002 agtccagcctccttagcaag 168983
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>dbj|AK167319.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530003M02
           product:methylthioadenosine phosphorylase, full insert
           sequence
          Length = 2546

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 750 tccagcctccttagcaagta 731
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>gb|AC140319.3| Mus musculus BAC clone RP23-413L6 from chromosome 16, complete sequence
          Length = 188184

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 665    agtgcctgcaagcaaggtcgtgtc 688
              |||||||||||||| |||||||||
Sbjct: 129194 agtgcctgcaagcatggtcgtgtc 129217
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>dbj|AK005064.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
           library, clone:1300019I21 product:5'-methylthioadenosine
           phosphorylase (EC 2.4.2.28) homolog [Homo sapiens], full
           insert sequence
          Length = 2506

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 696 tccagcctccttagcaagta 677
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>dbj|AK089916.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched
           library, clone:G430002E09 product:METHYLTHIOADENOSINE
           PHOSPHORYLASE (EC 2.4.2.28) homolog [Homo sapiens], full
           insert sequence
          Length = 1500

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 686 tccagcctccttagcaagta 667
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>dbj|AK011421.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610016J04
           product:METHYLTHIOADENOSINE PHOSPHORYLASE (EC 2.4.2.28)
           homolog [Homo sapiens], full insert sequence
          Length = 1506

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 694 tccagcctccttagcaagta 675
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 315      aggcattgcactgcacattt 334
                ||||||||||||||||||||
Sbjct: 29471529 aggcattgcactgcacattt 29471510
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>gb|AC004904.1|AC004904 Homo sapiens PAC clone RP5-828F13 from 1, complete sequence
          Length = 126041

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   gaaacaataaacgtgacaaa 217
             ||||||||||||||||||||
Sbjct: 97672 gaaacaataaacgtgacaaa 97653
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>ref|XM_215777.2| PREDICTED: Rattus norvegicus similar to PR-domain protein 11
            (predicted) (LOC295936), mRNA
          Length = 4155

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  tgaaacttggcctctgccac 636
            ||||||||||||||||||||
Sbjct: 3491 tgaaacttggcctctgccac 3472
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>gb|AC025613.14|AC025613 Homo sapiens chromosome 3 clone RP11-514J23, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aaaactatatagatgaaaca 203
             ||||||||||||||||||||
Sbjct: 63601 aaaactatatagatgaaaca 63582
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>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence
          Length = 195204

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    gcatgcccttggcttcagct 469
              ||||||||||||||||||||
Sbjct: 156781 gcatgcccttggcttcagct 156800
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>emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chromosome 2, complete
             sequence
          Length = 141599

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   tcctatgttcacctcctgtc 488
             ||||||||||||||||||||
Sbjct: 46157 tcctatgttcacctcctgtc 46176
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>emb|AL831719.6| Mouse DNA sequence from clone RP23-166I8 on chromosome 4, complete
              sequence
          Length = 194025

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    tccagcctccttagcaagta 366
              ||||||||||||||||||||
Sbjct: 132870 tccagcctccttagcaagta 132889
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>gb|AC145294.4| Mus musculus BAC clone RP23-88B16 from 7, complete sequence
          Length = 217265

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gcatgcccttggcttcagct 469
             ||||||||||||||||||||
Sbjct: 86443 gcatgcccttggcttcagct 86462
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>gb|AC153840.6| Mus musculus 10 BAC RP23-271A22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210217

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    agcaggcattgcactgcaca 331
              ||||||||||||||||||||
Sbjct: 116956 agcaggcattgcactgcaca 116937
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>gb|AC149596.2| Mus musculus BAC clone RP24-424J20 from 7, complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    gcatgcccttggcttcagct 469
              ||||||||||||||||||||
Sbjct: 133298 gcatgcccttggcttcagct 133279
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>gb|AC132571.2| Mus musculus BAC clone RP24-539E18 from 1, complete sequence
          Length = 200750

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 109    aacaccaacagcaatcatattgatcgca 136
              |||||||||| |||||||||||| ||||
Sbjct: 152094 aacaccaacaccaatcatattgaccgca 152067
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>ref|NM_024433.1| Mus musculus methylthioadenosine phosphorylase (Mtap), mRNA
          Length = 2565

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 693 tccagcctccttagcaagta 674
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>gb|AF012867.1|AF012867 Petroselinum crispum cytosolic chorismate mutase 2 (cCM2) mRNA,
           partial cds
          Length = 246

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 623 ttggcctctgccacaaacttcccatagtggattcttttagagagtgcctgcaagca 678
           |||||||| || || ||||| || ||||| |||||| ||||||  |||||||||||
Sbjct: 245 ttggcctcggcaacgaactttccgtagtgaattcttctagagatggcctgcaagca 190
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>gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   caggcattgcactgcacatt 333
             ||||||||||||||||||||
Sbjct: 41541 caggcattgcactgcacatt 41560
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>dbj|AB056100.1| Mus musculus mtap mRNA for methylthioadenosine phosphorylase,
           complete cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 347 tccagcctccttagcaagta 366
           ||||||||||||||||||||
Sbjct: 737 tccagcctccttagcaagta 718


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,206,551
Number of Sequences: 3902068
Number of extensions: 6206551
Number of successful extensions: 107655
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107417
Number of HSP's gapped (non-prelim): 234
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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