>TM115_HUMAN (Q12893) Transmembrane protein 115 (Protein PL6) (Placental protein|
           6) (PP6)
          Length = 351

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
 Frame = -3

Query: 557 SWLYLRYFQRNPLTGLKGDPSDDFSFPSLFPDAMRPVTDPVANMFDRML-----CVRS-- 399
           SW+YLR++QR+     +GD +D F+F + FP+ ++PV   +AN+   +L     C ++  
Sbjct: 201 SWVYLRFYQRHSRG--RGDMADHFAFATFFPEILQPVVGLLANLVHSLLVKVKICQKTVK 258

Query: 398 -------KTSEIALPVTDPTKA 354
                   +  I+LP TDP  A
Sbjct: 259 RYDVGAPSSITISLPGTDPQDA 280

>TM115_MOUSE (Q9WUH1) Transmembrane protein 115 (Protein PL6 homolog)|
          Length = 350

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
 Frame = -3

Query: 557 SWLYLRYFQRNPLTGLKGDPSDDFSFPSLFPDAMRPVTDPVANMFDRML-----CVRS-- 399
           SW+YLR++QR+     +GD +D F+F + FP+ ++PV   +AN+   +L     C ++  
Sbjct: 201 SWVYLRFYQRHSRG--RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVK 258

Query: 398 -------KTSEIALPVTDPTKA 354
                   +  I+LP TDP  A
Sbjct: 259 RYDVGAPSSITISLPGTDPQDA 280

>YO107_YEAST (Q12239) Uncharacterized protein YOL107W|
          Length = 342

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
 Frame = -3

Query: 557 SWLYLRYFQRN--------PLTG-------LKGDPSDDFSFPSLFPDAMRPVTDPVANMF 423
           SW YLR+FQ+         P T        L GD SD F     FPD ++P+  P+ N  
Sbjct: 227 SWSYLRFFQKLAPLNCPSLPTTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFI 286

Query: 422 DRMLCVRSK 396
             ++ V+ K
Sbjct: 287 YNVVVVKFK 295

>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = +3

Query: 288 VSRMIRGHPFLE--------NPLATLPSSRCLGRIGNWEGNFRSLGPHTQHAVEHVSNWV 443
           V R + GHP           +P + + SS     I  WE  + SL    +  VEH  NW 
Sbjct: 264 VCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTILGWEPKYPSL----ETMVEHAWNWH 319

Query: 444 CDWPHG 461
            + PHG
Sbjct: 320 KEHPHG 325

>EPN2_MOUSE (Q8CHU3) Epsin-2 (EPS-15-interacting protein 2)|
           (Intersectin-EH-binding protein 2) (Ibp2)
          Length = 595

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 73  QHNLTNQYSQNKETKKGGKVLSYHRSTVKMNMLPREQVRGVT 198
           Q NL+  YS+ +  K GG   SYH ST        EQ R  T
Sbjct: 174 QPNLSTSYSEQEYGKAGGSPASYHGSTSPRVSSELEQARPQT 215

>RENT1_FUGRU (Q98TR3) Putative regulator of nonsense transcripts 1 (EC 3.6.1.-)|
            (ATP-dependent helicase RENT1)
          Length = 1097

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 296  HDPRPSFPREPSRHAPFFSMPW*DR*LGGQF 388
            H   P+FP EP+R  P  ++PW D  LG +F
Sbjct: 1037 HLHEPAFPDEPARTLPARALPW-DSYLGDEF 1066


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,505,517
Number of Sequences: 219361
Number of extensions: 1842115
Number of successful extensions: 5525
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5518
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)