| Clone Name | rbags10d03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CALX_SOYBN (Q39817) Calnexin homolog precursor | 119 | 6e-27 | 2 | CALX2_ARATH (Q38798) Calnexin homolog 2 precursor | 107 | 3e-23 | 3 | CALX_PEA (O82709) Calnexin homolog precursor | 104 | 3e-22 | 4 | CALX1_ARATH (P29402) Calnexin homolog 1 precursor | 97 | 4e-20 | 5 | CALX_HELTU (Q39994) Calnexin homolog precursor | 81 | 3e-15 | 6 | SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... | 32 | 2.3 | 7 | KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... | 31 | 3.9 | 8 | ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1) | 30 | 5.1 |
|---|
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 119 bits (299), Expect = 6e-27 Identities = 59/106 (55%), Positives = 72/106 (67%) Frame = -2 Query: 674 NILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXXEDLSEFQKKIFSVLYKIADI 495 N+LIA+D+KVA S E TWKPKF V + +S FQKK+F +LYKIADI Sbjct: 392 NVLIANDDKVAESYRETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKIADI 451 Query: 494 PFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 357 PFL +K KI DLIEK EKQPN+TI IL +V V+ V++ FR IFGG Sbjct: 452 PFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGG 497
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 107 bits (267), Expect = 3e-23 Identities = 53/127 (41%), Positives = 73/127 (57%) Frame = -2 Query: 674 NILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXXEDLSEFQKKIFSVLYKIADI 495 NILI+ DEKVA + + TWKPKF V + L +QKK+F +LYK+ADI Sbjct: 385 NILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADI 444 Query: 494 PFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXXXXXXXXXXX 315 FL YK KI++LIEK E QPN+TI +L S+ ++ +++ F+ IFGG Sbjct: 445 SFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKVEKKKPETAA 504 Query: 314 XPSATEA 294 S +EA Sbjct: 505 ETSTSEA 511
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 104 bits (259), Expect = 3e-22 Identities = 55/112 (49%), Positives = 68/112 (60%), Gaps = 6/112 (5%) Frame = -2 Query: 674 NILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXXEDLSE------FQKKIFSVL 513 N+LIA D+K+A S E TWKPKF + SE QKK F +L Sbjct: 391 NVLIAKDDKIAESYRETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAFDLL 450 Query: 512 YKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 357 YKIADI FL K KII++IEKGEKQPN+TI I+ SV ++ V++ FR IFGG Sbjct: 451 YKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG 502
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 97.1 bits (240), Expect = 4e-20 Identities = 47/106 (44%), Positives = 65/106 (61%) Frame = -2 Query: 674 NILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXXEDLSEFQKKIFSVLYKIADI 495 NILIA DEKVA + + TWKPKF V + L +QK +F +L K+AD+ Sbjct: 383 NILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADL 442 Query: 494 PFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 357 FL YK KI +LIEK E+QPN+TI +L ++ V+ ++ + IFGG Sbjct: 443 SFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGG 488
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 80.9 bits (198), Expect = 3e-15 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 6/112 (5%) Frame = -2 Query: 674 NILIADDEKVA------MSILEKTWKPKFVVXXXXXXXXXXXXXXXEDLSEFQKKIFSVL 513 NILIA DEK A + WK + + L QK +F VL Sbjct: 387 NILIASDEKTAAKSGILLGSRSLRWKKR-------NRRLKKNQPLLDGLKGIQKAVFDVL 439 Query: 512 YKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 357 YKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L + +FGG Sbjct: 440 YKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGG 491
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 2.3 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -1 Query: 414 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 289 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 3.9 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -1 Query: 405 SCCHPCYCALQNHFRWQEGSGTCEARCC 322 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 5.1 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -1 Query: 390 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 295 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,232,824 Number of Sequences: 219361 Number of extensions: 1142802 Number of successful extensions: 3403 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3396 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)