| Clone Name | rbags10c22 |
|---|---|
| Clone Library Name | barley_pub |
>RL37A_PSEMZ (Q9ZRS8) 60S ribosomal protein L37a| Length = 92 Score = 169 bits (427), Expect = 7e-42 Identities = 88/118 (74%), Positives = 90/118 (76%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 MTKRTKKAGIVGKYG TRYGASLRKQIKKMEVSQ Sbjct: 1 MTKRTKKAGIVGKYG---------------------------TRYGASLRKQIKKMEVSQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 HSK+FCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYT+NT SAVTVRSTIRRLREQTE Sbjct: 34 HSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
>RL37A_GOSHI (Q9XHE4) 60S ribosomal protein L37a| Length = 92 Score = 168 bits (426), Expect = 9e-42 Identities = 88/119 (73%), Positives = 91/119 (76%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 MTKRTKKAGIVGKYG TRYGASLRKQIKKMEVSQ Sbjct: 1 MTKRTKKAGIVGKYG---------------------------TRYGASLRKQIKKMEVSQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 HSKYFCEFCGK+AVKRKAVGIWGCK CGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+ Sbjct: 34 HSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
>RL37A_ARATH (Q9SRK6) 60S ribosomal protein L37a| Length = 92 Score = 166 bits (419), Expect = 6e-41 Identities = 86/119 (72%), Positives = 90/119 (75%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 MTKRTKKA IVGKYG TRYGASLRKQIKKMEVSQ Sbjct: 1 MTKRTKKARIVGKYG---------------------------TRYGASLRKQIKKMEVSQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 H+KYFCEFCGK++VKRK VGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE+ Sbjct: 34 HNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
>RL37A_BRARA (P43209) 60S ribosomal protein L37a| Length = 92 Score = 157 bits (398), Expect = 2e-38 Identities = 84/117 (71%), Positives = 86/117 (73%), Gaps = 1/117 (0%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGAS+RKQIKKMEVSQHS Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASIRKQIKKMEVSQHS 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRS-TIRRLREQTE 198 KYFCEFCGK+ VKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRS TIRRLREQ E Sbjct: 35 KYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 91
>RL37A_CRYST (O61462) 60S ribosomal protein L37a| Length = 91 Score = 128 bits (321), Expect = 1e-29 Identities = 66/117 (56%), Positives = 77/117 (65%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KKME++QHS Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKTVKKMEITQHS 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 KY C+FCGK A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE E+ Sbjct: 35 KYTCQFCGKDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 91
>RL43_ASHGO (Q751L1) 60S ribosomal protein L43| Length = 92 Score = 123 bits (309), Expect = 3e-28 Identities = 64/119 (53%), Positives = 73/119 (61%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 M KRTKK GI GKYG+R YG+SLR+Q+KK+EV Q Sbjct: 1 MAKRTKKVGITGKYGVR---------------------------YGSSLRRQVKKLEVQQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 H++Y C FCGK AVKR A GIW C C K AGGAYT +TA+A TVRSTIRRLRE EA Sbjct: 34 HARYDCSFCGKKAVKRGAAGIWNCSSCKKTVAGGAYTFSTAAAATVRSTIRRLREMAEA 92
>RL37A_CHICK (P32046) 60S ribosomal protein L37a| Length = 91 Score = 120 bits (300), Expect = 4e-27 Identities = 63/113 (55%), Positives = 71/113 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 207 KY C FCGK +KRKAVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 35 KYTCSFCGKTKMKRKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 87
>RL43_CANGA (Q6FRG6) 60S ribosomal protein L43| Length = 92 Score = 119 bits (299), Expect = 5e-27 Identities = 61/119 (51%), Positives = 73/119 (61%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 M KRTKK GI GKYG+R YG+SLR+Q+KK+EV Q Sbjct: 1 MAKRTKKVGITGKYGVR---------------------------YGSSLRRQVKKLEVQQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 H++Y C FCGK V+R A GIW C C K AGGAYT++TA+A TVRSTIRRLR+ EA Sbjct: 34 HARYDCSFCGKKTVRRGAAGIWSCHSCKKTVAGGAYTVSTAAAATVRSTIRRLRDMVEA 92
>RL37A_XENLA (Q7SZB4) 60S ribosomal protein L37a| Length = 91 Score = 119 bits (299), Expect = 5e-27 Identities = 62/113 (54%), Positives = 72/113 (63%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TR+GASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRFGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 207 KY C FCGK +KRKAVGIW C C K+ AGGA+T NT SAVTV+S IRRL+E Sbjct: 35 KYTCSFCGKTKMKRKAVGIWHCGSCMKIVAGGAWTYNTTSAVTVKSAIRRLKE 87
>RL37A_CAEEL (Q9U2A8) 60S ribosomal protein L37a| Length = 90 Score = 119 bits (299), Expect = 5e-27 Identities = 64/116 (55%), Positives = 70/116 (60%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK KK+EV+QHS Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMAKKLEVAQHS 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 +Y C FCGK A+KRKA GIW C C KV AGGAY T +A TVRSTIRRLR+ E Sbjct: 35 RYTCSFCGKEAMKRKATGIWNCAKCHKVVAGGAYVYGTVTAATVRSTIRRLRDLKE 90
>RL37A_RAT (P61515) 60S ribosomal protein L37a| Length = 91 Score = 119 bits (297), Expect = 9e-27 Identities = 62/113 (54%), Positives = 71/113 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 207 KY C FCGK +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 35 KYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 87
>RL37A_MOUSE (P61514) 60S ribosomal protein L37a| Length = 91 Score = 119 bits (297), Expect = 9e-27 Identities = 62/113 (54%), Positives = 71/113 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 207 KY C FCGK +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 35 KYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 87
>RL37A_HUMAN (P61513) 60S ribosomal protein L37a| Length = 91 Score = 119 bits (297), Expect = 9e-27 Identities = 62/113 (54%), Positives = 71/113 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 207 KY C FCGK +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 35 KYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 87
>RL43_YEAST (P49631) 60S ribosomal protein L43 (L37A) (YL35)| Length = 91 Score = 118 bits (295), Expect = 1e-26 Identities = 61/117 (52%), Positives = 72/117 (61%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GI GKYG+R YG+SLR+Q+KK+E+ QH+ Sbjct: 2 KRTKKVGITGKYGVR---------------------------YGSSLRRQVKKLEIQQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 +Y C FCGK VKR A GIW C C K AGGAYT++TA+A TVRSTIRRLRE EA Sbjct: 35 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 91
>RL37A_ICTPU (Q90YT0) 60S ribosomal protein L37a| Length = 91 Score = 118 bits (295), Expect = 1e-26 Identities = 61/116 (52%), Positives = 72/116 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 KY C FCGK +KR+AVGIW C C K AGGA+T NT SAVTV+S I+RL+E + Sbjct: 35 KYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIKRLKEMKD 90
>RL37A_OSTOS (O61598) 60S ribosomal protein L37a| Length = 90 Score = 117 bits (294), Expect = 2e-26 Identities = 61/116 (52%), Positives = 70/116 (60%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KKME++QHS Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKMEITQHS 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 +Y C FCGK A++R AVGIW C C K AGGAY T +A TVRST+RRLR+ E Sbjct: 35 RYTCPFCGKDAMRRGAVGIWNCSKCKKTVAGGAYVYGTVAAATVRSTVRRLRDLKE 90
>RL37A_SCHMA (O17307) 60S ribosomal protein L37a (Fragment)| Length = 91 Score = 117 bits (292), Expect = 3e-26 Identities = 61/117 (52%), Positives = 73/117 (62%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG+R YGASLRK IKK+E+SQH+ Sbjct: 2 KRTKKVGIVGKYGVR---------------------------YGASLRKTIKKIEISQHA 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 195 KY C FCGK ++KRKA GIW CK C KV AGGAY +T +A T+R+ IRRLR+ E+ Sbjct: 35 KYNCNFCGKDSLKRKAAGIWECKACKKVVAGGAYVCSTTAATTIRAAIRRLRDAHES 91
>RL37A_DROME (Q9VMU4) 60S ribosomal protein L37| Length = 91 Score = 115 bits (287), Expect = 1e-25 Identities = 59/116 (50%), Positives = 70/116 (60%) Frame = -3 Query: 545 KRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHS 366 KRTKK GIVGKYG TRYGASLRK +KKME++QHS Sbjct: 2 KRTKKVGIVGKYG---------------------------TRYGASLRKMVKKMEITQHS 34 Query: 365 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 KY C FCGK ++KR VGIW CK C + AGGA+ +T +A +VRS +RRLRE E Sbjct: 35 KYTCSFCGKDSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVRRLRETKE 90
>RL37A_MYXGL (Q9Y0H7) 60S ribosomal protein L37a (Fragment)| Length = 85 Score = 113 bits (282), Expect = 5e-25 Identities = 52/77 (67%), Positives = 62/77 (80%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 GTRYGASLRK +KK+E++QHSKY C FCGK +KR+AVGIW C C K AGGA+T NT+ Sbjct: 8 GTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTS 67 Query: 248 SAVTVRSTIRRLREQTE 198 SAVTV+S IRRLRE + Sbjct: 68 SAVTVKSAIRRLREMKD 84
>RL43B_SCHPO (O94686) 60S ribosomal protein L43-B (L37B)| Length = 94 Score = 112 bits (280), Expect = 8e-25 Identities = 59/120 (49%), Positives = 71/120 (59%), Gaps = 2/120 (1%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 MTKRTKK G+ GKYG+R YGASLR+ ++K+EV Q Sbjct: 1 MTKRTKKVGVTGKYGVR---------------------------YGASLRRDVRKIEVQQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGC--KDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 HS+Y C FCG+ VKR A GIW C K C K AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 34 HSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
>RL43A_SCHPO (Q9HGL8) 60S ribosomal protein L43-A (L37A)| Length = 94 Score = 111 bits (278), Expect = 1e-24 Identities = 60/120 (50%), Positives = 72/120 (60%), Gaps = 2/120 (1%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 MTKRTKK G+ GKYG+R YGASLR+ ++K+EV Q Sbjct: 1 MTKRTKKVGVTGKYGVR---------------------------YGASLRRDVRKIEVQQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGC--KDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 HS+Y C FCG+ VKR A GIW C K C KV AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 34 HSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
>RL37A_PLAF7 (O96184) 60S ribosomal protein L37a| Length = 96 Score = 108 bits (271), Expect = 9e-24 Identities = 56/118 (47%), Positives = 70/118 (59%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 M++RTKK G+ GKYG TRYG+SLRKQIKK+E+ Q Sbjct: 1 MSRRTKKVGLTGKYG---------------------------TRYGSSLRKQIKKIELMQ 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 198 H+KY C FCGK A KR VGIW CK C + GGA+++ T +AV +STI RLR+Q E Sbjct: 34 HAKYLCTFCGKTATKRTCVGIWKCKKCKRKVCGGAWSLTTPAAVAAKSTIIRLRKQKE 91
>RL37A_METJA (P54051) 50S ribosomal protein L37Ae| Length = 92 Score = 68.9 bits (167), Expect = 1e-11 Identities = 32/85 (37%), Positives = 45/85 (52%) Frame = -3 Query: 452 EISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 273 ++ P G RYG +R +++ +E+ KY C CG +KR + IW C CG AG Sbjct: 7 KVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCGFPKLKRASTSIWVCGKCGAKIAG 66 Query: 272 GAYTMNTASAVTVRSTIRRLREQTE 198 GAYT T + V IRR+ E+ E Sbjct: 67 GAYTPETGAGKAVMKAIRRIVERKE 91
>RL37A_METKA (Q8TYC3) 50S ribosomal protein L37Ae| Length = 89 Score = 67.0 bits (162), Expect = 4e-11 Identities = 32/83 (38%), Positives = 44/83 (53%) Frame = -3 Query: 452 EISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 273 ++ P G RYG +R+++ ++E Q K+ C C K AVKR GIW C CG G Sbjct: 6 KVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAEFTG 65 Query: 272 GAYTMNTASAVTVRSTIRRLREQ 204 GAY T + VR IR+ E+ Sbjct: 66 GAYYPETEAQRIVRRAIRKALEE 88
>RL37A_PYRFU (Q8TZI4) 50S ribosomal protein L37Ae| Length = 83 Score = 63.9 bits (154), Expect = 3e-10 Identities = 28/66 (42%), Positives = 38/66 (57%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG +R+++ +E K+ C CG+ AVKR + GIW C+ CG AGGAY T Sbjct: 14 GARYGLKIRRRVAAVEAKMRQKHTCPVCGRKAVKRISTGIWQCQKCGATFAGGAYLPVTP 73 Query: 248 SAVTVR 231 + VR Sbjct: 74 AGKAVR 79
>RL37A_METMP (Q6M0M1) 50S ribosomal protein L37Ae| Length = 96 Score = 63.9 bits (154), Expect = 3e-10 Identities = 30/82 (36%), Positives = 43/82 (52%) Frame = -3 Query: 452 EISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 273 +I G+RYG +R +++ +E+ Q+ Y C C +KR IW C+ CG AG Sbjct: 9 KIGSAGRFGSRYGRKIRVRLRDVEIKQNKDYKCPVCAFPKLKRAGTSIWVCEKCGAKIAG 68 Query: 272 GAYTMNTASAVTVRSTIRRLRE 207 GAYT T + V IRR+ E Sbjct: 69 GAYTPETGAGKVVTKAIRRVIE 90
>RL37A_PYRAB (Q9V202) 50S ribosomal protein L37Ae| Length = 83 Score = 63.5 bits (153), Expect = 4e-10 Identities = 26/69 (37%), Positives = 39/69 (56%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG +R+++ +E K+ C CG+ AV+R + GIW CK CG + AGGAY T Sbjct: 14 GPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIFAGGAYLPVTP 73 Query: 248 SAVTVRSTI 222 + + + Sbjct: 74 AGKVAKRVV 82
>RL37A_PYRHO (O74106) 50S ribosomal protein L37Ae| Length = 83 Score = 63.2 bits (152), Expect = 6e-10 Identities = 27/66 (40%), Positives = 37/66 (56%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG +R+++ +E K+ C CG+ AVKR + GIW C CG + AGGAY T Sbjct: 14 GARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCGAIFAGGAYLPVTP 73 Query: 248 SAVTVR 231 + R Sbjct: 74 AGKVAR 79
>RL37A_METTH (O26777) 50S ribosomal protein L37Ae| Length = 89 Score = 62.8 bits (151), Expect = 7e-10 Identities = 35/110 (31%), Positives = 48/110 (43%) Frame = -3 Query: 542 RTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHSK 363 RTKK GI G++G RYG ++ +KK+E K Sbjct: 3 RTKKVGITGRFG---------------------------PRYGRKAKRAVKKIEEEMKRK 35 Query: 362 YFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRL 213 + C C + VKR++ GIW C+ CG V GGAY T T I+R+ Sbjct: 36 HVCPSCDRPGVKRESRGIWKCRKCGAVFTGGAYLPVTPMGKTAARNIKRI 85
>RL37A_ARCFU (O30179) 50S ribosomal protein L37Ae| Length = 83 Score = 62.0 bits (149), Expect = 1e-09 Identities = 29/69 (42%), Positives = 37/69 (53%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG +R+ ++E Q KY C+ CGK AVKR GIW C+ CG AGG Y T Sbjct: 14 GPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYKFAGGCYQPVTP 73 Query: 248 SAVTVRSTI 222 V ++ Sbjct: 74 GGKIVEKSV 82
>RL37A_PYRKO (Q5JDM6) 50S ribosomal protein L37Ae| Length = 86 Score = 61.2 bits (147), Expect = 2e-09 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 455 SEISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKA 276 +++ G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG A Sbjct: 5 TKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFA 64 Query: 275 GGAYTMNT-ASAVTVRST 225 GGAY T A V R T Sbjct: 65 GGAYLPTTPAGKVAKRVT 82
>RL37A_HALSA (Q9HSG8) 50S ribosomal protein L37Ae| Length = 95 Score = 60.8 bits (146), Expect = 3e-09 Identities = 30/76 (39%), Positives = 40/76 (52%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG R+++ +E + + + C CG AV R+ GIW C CG AGGAY T Sbjct: 14 GARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCGYKYAGGAYQPQTP 73 Query: 248 SAVTVRSTIRRLREQT 201 S TV +IR +T Sbjct: 74 SGKTVTRSIRTALGET 89
>RL37A_NANEQ (Q74N55) 50S ribosomal protein L37Ae| Length = 86 Score = 60.5 bits (145), Expect = 4e-09 Identities = 27/63 (42%), Positives = 37/63 (58%) Frame = -3 Query: 452 EISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 273 ++ P G RYG +RK++ +E+ Q K+ C FC AV R+A GI+ CK CGK G Sbjct: 8 KVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFCRSKAVIREAYGIYRCKKCGKQFTG 67 Query: 272 GAY 264 AY Sbjct: 68 LAY 70
>RL37A_AERPE (Q9YC06) 50S ribosomal protein L37Ae| Length = 86 Score = 60.5 bits (145), Expect = 4e-09 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = -3 Query: 449 ISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFA-VKRKAVGIWGCKDCGKVKAG 273 + P G RYG S+RK+++ + ++ + C FCG V+R +VG+W C+ CG AG Sbjct: 7 VGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGNTWAG 66 Query: 272 GAYTMNTASA 243 AYT + A Sbjct: 67 AAYTPRSGLA 76
>RL37A_THEAC (Q9HIP0) 50S ribosomal protein L37Ae| Length = 80 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/97 (32%), Positives = 45/97 (46%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 M+KRT K G+ G++G RYG ++RK+ ++ + Sbjct: 1 MSKRTVKVGVAGRFG---------------------------PRYGVTIRKEWSEIYKQK 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYT 261 + Y C C K VKR A GIW C+ CG AGG+YT Sbjct: 34 IALYTCPSCKKKRVKRVANGIWQCRHCGYKFAGGSYT 70
>RL37A_PYRAE (Q8ZVN1) 50S ribosomal protein L37Ae| Length = 101 Score = 56.2 bits (134), Expect = 7e-08 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 449 ISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFA-VKRKAVGIWGCKDCGKVKAG 273 + P G RYG LR+++ +EV Q K+ C C ++R A GIW C CG AG Sbjct: 9 VGPAGRYGARYGMGLRRKVTAIEVKQRGKHRCPSCRSLVRLERIAFGIWRCPKCGFTFAG 68 Query: 272 GAYTMNT 252 GA+T T Sbjct: 69 GAWTPQT 75
>RL37A_THEVO (Q97BZ3) 50S ribosomal protein L37Ae| Length = 80 Score = 54.7 bits (130), Expect = 2e-07 Identities = 32/96 (33%), Positives = 43/96 (44%) Frame = -3 Query: 551 MTKRTKKAGIVGKYGMRL*HLTLFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQ 372 M+KRT K G G++G RYG ++RK+ ++ + Sbjct: 1 MSKRTLKVGAAGRFG---------------------------PRYGVTIRKEWNEIYKQK 33 Query: 371 HSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAY 264 + Y C C K VKR A GIW C+ CG AGGAY Sbjct: 34 IALYTCPSCKKKRVKRLAAGIWVCRHCGYKFAGGAY 69
>RL37A_HALMA (P60619) 50S ribosomal protein L37Ae| Length = 92 Score = 54.7 bits (130), Expect = 2e-07 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTA 249 G RYG R+++ ++E + + C CG+ V R+ GIW C C GG+Y T Sbjct: 15 GARYGRVSRRRVAEIESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETP 74 Query: 248 SAVTVRSTIRRLREQTE 198 TVR +IR + E Sbjct: 75 GGKTVRRSIRAALSEDE 91
>RL37A_PICTO (Q6L225) 50S ribosomal protein L37Ae| Length = 85 Score = 50.1 bits (118), Expect = 5e-06 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAY 264 G RYG ++RK+ K V + + Y C C + V+R A GIW C+ C AGG+Y Sbjct: 15 GPRYGVTVRKEWSKYYVQKKAYYVCPKCKQKKVRRIANGIWECRHCSYKFAGGSY 69
>RL37A_SULSO (Q97ZQ3) 50S ribosomal protein L37Ae| Length = 70 Score = 47.4 bits (111), Expect = 3e-05 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFC---GKFAVKRKAVGIWGCKDCGKVKAGGAYT 261 G RYG++LRK+ K++ ++ ++ C +C GK V R A GIW CK C AG AYT Sbjct: 12 GARYGSTLRKKWKEIMEKRYDEHQCPYCKTTGK--VIRLASGIWYCKKCNSKWAGLAYT 68
>RL37A_SULTO (Q975H0) 50S ribosomal protein L37Ae| Length = 70 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%) Frame = -3 Query: 428 GTRYGASLRKQIKKMEVSQHSKYFCEFC---GKFAVKRKAVGIWGCKDCGKVKAGGAYT 261 G RYG+S+RK+ K++ ++ + C C GK V R A G+W CK CG AG AYT Sbjct: 12 GARYGSSVRKKWKEIMEKRYQDHQCPVCKTTGK--VVRIASGVWYCKKCGAKWAGLAYT 68
>ZN226_HUMAN (Q9NYT6) Zinc finger protein 226| Length = 803 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 10/63 (15%) Frame = -3 Query: 440 CNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGI----------WGCKDC 291 C G + S R QI ++ + Y CE CGK +R + I + C++C Sbjct: 561 CEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEEC 620 Query: 290 GKV 282 GKV Sbjct: 621 GKV 623 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Frame = -3 Query: 485 LFPVHVVLLFSEISPCNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGI- 309 + PVH + E C+ G + Q + Y C+ CGK +R A+ + Sbjct: 294 VLPVHQKVHVGEKLKCDECGKEFSQGAHLQTHQKVHVIEKPYKCKQCGKGFSRRSALNVH 353 Query: 308 ---------WGCKDCGK 285 + C++CG+ Sbjct: 354 CKVHTAEKPYNCEECGR 370
>ZN234_HUMAN (Q14588) Zinc finger protein 234 (Zinc finger protein HZF4)| Length = 700 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 10/63 (15%) Frame = -3 Query: 440 CNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGI----------WGCKDC 291 C G + S R QI ++ + Y CE CGK +R + I + C++C Sbjct: 458 CEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEEC 517 Query: 290 GKV 282 GKV Sbjct: 518 GKV 520
>RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1 papain-like cysteine proteinase (EC 3.4.22.-) (PCP); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Nonstructural protein Length = 3175 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Frame = -3 Query: 401 KQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYT----MNTASAVTV 234 + + Q+ C CG V + A G W C +C AG +T N + Sbjct: 2359 EMLTSFRTKQYESAVCTVCGAAPVAKSACGGWFCGNCVPYHAGHCHTTSLFANCGHDIMY 2418 Query: 233 RST 225 RST Sbjct: 2419 RST 2421
>PILS_PSEAE (P33639) Sensor protein pilS (EC 2.7.13.3)| Length = 530 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = -3 Query: 284 VKAGGAYTMNTASAVTVRSTIRRLREQTEA----*SHYYCYLEEFSSSVVELKTSNICIL 117 V+AGG T+ A+A+ +++ +RR +EQTE + LEE ++ +++ + I ++ Sbjct: 154 VQAGGLGTLCFAAALVIQALVRR-QEQTETLAEERAETVANLEELNALILQRMRTGILVV 212 Query: 116 AIQQRISVSN 87 +Q I ++N Sbjct: 213 DSRQAILLAN 222
>ZFP91_HUMAN (Q96JP5) Zinc finger protein 91 homolog (Zfp-91)| Length = 570 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Frame = -3 Query: 440 CNVIG--TRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGA 267 C + G R ASL +KK + ++ C CGK K+ +V K +V A Sbjct: 402 CEICGFTCRQKASLNWHMKKHDADSFYQFSCNICGKKFEKKDSVVAHKAKSHPEVLIAEA 461 Query: 266 YTMNTASAVT 237 N + +T Sbjct: 462 LAANAGALIT 471
>ZFP91_MOUSE (Q62511) Zinc finger protein 91 (Zfp-91) (Zinc finger protein PZF)| (Penta Zf protein) Length = 455 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Frame = -3 Query: 440 CNVIG--TRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGA 267 C + G R ASL +KK + ++ C CGK K+ +V K +V A Sbjct: 287 CEICGFTCRQKASLNWHMKKHDADSFYQFSCNICGKKFEKKDSVVAHKAKSHPEVLIAEA 346 Query: 266 YTMNTASAVT 237 N + +T Sbjct: 347 LAANAGALIT 356
>GIT3_SCHPO (O94744) Glucose receptor protein git3 (Glucose insensitive| transcription protein 3) Length = 466 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 418 YLVPITLQGLISENSRTT*TGKRVKCYKRIPYFP 519 +++P+T+ GL N R T + +CY +PY P Sbjct: 151 FVIPLTIGGLAFTNKRNTFVNLQTRCY--LPYTP 182
>ZN225_HUMAN (Q9UK10) Zinc finger protein 225| Length = 706 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Frame = -3 Query: 440 CNVIGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAV----------GIWGCKDC 291 C+ G +G +M + +Y CE CGK + R+ + + CK+C Sbjct: 318 CDTCGKSFGLKSALNSHRMVHTGEKRYKCEECGKRFIYRQDLYKHQIDHTGEKPYNCKEC 377 Query: 290 GK 285 GK Sbjct: 378 GK 379 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,673,967 Number of Sequences: 219361 Number of extensions: 1554258 Number of successful extensions: 4181 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4144 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)