ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags10b18 |
|---|---|
| Clone Library Name | barley_pub |
>CRK_DAUCA (P53681) CDPK-related protein kinase (EC 2.7.11.1) (PK421)| Length = 602 Score = 193 bits (491), Expect = 3e-49 Identities = 95/175 (54%), Positives = 134/175 (76%), Gaps = 2/175 (1%) Frame = -1 Query: 626 DMLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRM 447 D+LVFKL+K Y+RS+P ++AAL+ALS+ +T DEL Y + Q+ LL+P+ ++G I +EN + Sbjct: 421 DILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPT-KNGTISLENIKQ 479 Query: 446 ALLQNSTDAMKESRALDILSTLEPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFE 267 AL++NSTDAMK+SR LD+L +L L YRRMDFEEF AA +S +QLEA W++ A A++ Sbjct: 480 ALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYD 539 Query: 266 CFEQEGNRVITIEELAQEMNL--SSAAYSIVRDWIRPSDGKLSFIGYTKFLHGLT 108 FE++GNR I IEELA E+ L S ++++ DWIR +DGKLSF+GY K LHG++ Sbjct: 540 LFEKDGNRAIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHGVS 594
>CDPK1_ARATH (Q06850) Calcium-dependent protein kinase, isoform AK1 (EC| 2.7.11.1) (CDPK) Length = 610 Score = 58.5 bits (140), Expect = 2e-08 Identities = 40/166 (24%), Positives = 86/166 (51%), Gaps = 4/166 (2%) Frame = -1 Query: 626 DMLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRM 447 D V +K + FK+ AL+ ++ +++E+E+ + +N++ + + G+I E + Sbjct: 420 DSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMID-ADKSGQITFEELKA 478 Query: 446 ALLQNSTDAMKESRALDILSTLEPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFE 267 L + + +KES LD++ + +D++EF AAT+ ++E ++ AF Sbjct: 479 GLKRVGAN-LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIER----EDHLFAAFT 533 Query: 266 CFEQEGNRVITIEELAQ---EMNLSSAAY-SIVRDWIRPSDGKLSF 141 F+++G+ IT +EL Q E + ++RD + +DG++ + Sbjct: 534 YFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDY 579
>CDPK2_ORYSA (P53683) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1)| (CDPK 2) Length = 533 Score = 45.4 bits (106), Expect = 1e-04 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 5/176 (2%) Frame = -1 Query: 626 DMLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRM 447 D V +K + K+ ALK ++ + E+E+ + + + + G I E + Sbjct: 354 DSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMD-TDNSGTITYEELKA 412 Query: 446 ALLQNSTDAMKESRALDILSTLEPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFE 267 L + + + E+ ++ + +D+ EF AT+ ++LE DE AF+ Sbjct: 413 GLAKLGS-KLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLER----DEHLFKAFQ 467 Query: 266 CFEQEGNRVITIEEL-----AQEMNLSSAAYSIVRDWIRPSDGKLSFIGYTKFLHG 114 F+++ + IT +EL EM +S I+ + +DG++++ + + G Sbjct: 468 YFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRG 523
>CDPK2_MAIZE (P49101) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2)| Length = 513 Score = 45.1 bits (105), Expect = 2e-04 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 5/176 (2%) Frame = -1 Query: 626 DMLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRM 447 D V +K + K+ ALK ++ + E+E+ + + + + G I E + Sbjct: 335 DSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMF-MNMDTDNSGTITYEELKA 393 Query: 446 ALLQNSTDAMKESRALDILSTLEPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFE 267 L + + + E+ ++ + +D+ EF AT+ ++LE DE AF+ Sbjct: 394 GLAKLGS-KLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLER----DEHLFKAFQ 448 Query: 266 CFEQEGNRVITIEEL-----AQEMNLSSAAYSIVRDWIRPSDGKLSFIGYTKFLHG 114 F+++ + IT +EL EM +S I+ + +DG++++ + + G Sbjct: 449 YFDKDNSGFITRDELESALIEHEMGDTSTIREIISEVDTDNDGRINYEEFCAMMRG 504
>CDPK_DAUCA (P28582) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK)| Length = 532 Score = 37.7 bits (86), Expect = 0.028 Identities = 29/139 (20%), Positives = 64/139 (46%) Frame = -1 Query: 626 DMLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRM 447 D V +K + K+ ALK ++ +++E+E+ ++ + + + + G I E + Sbjct: 351 DSAVLSRMKQFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMD-TDKSGTITYEELKS 409 Query: 446 ALLQNSTDAMKESRALDILSTLEPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFE 267 L + + + E ++ + +D+ EF AT+ ++LE+ AF+ Sbjct: 410 GLARLGS-KLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLES------YEHQAFQ 462 Query: 266 CFEQEGNRVITIEELAQEM 210 F+++ + IT +EL M Sbjct: 463 YFDKDNSGFITKDELESAM 481
>TNNC2_RABIT (P02586) Troponin C, skeletal muscle| Length = 159 Score = 37.4 bits (85), Expect = 0.037 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS------S 198 +DFEEF + + +A +E + F F++ + I EELA+ S Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129 Query: 197 AAYSIVRDWIRPSDGKLSFIGYTKFLHGL 111 S+++D + +DG++ F + K + G+ Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
>TNNC2_MOUSE (P20801) Troponin C, skeletal muscle (STNC)| Length = 159 Score = 37.4 bits (85), Expect = 0.037 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS------S 198 +DFEEF + + +A +E + F F++ + I EELA+ S Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTEE 129 Query: 197 AAYSIVRDWIRPSDGKLSFIGYTKFLHGL 111 S+++D + +DG++ F + K + G+ Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
>TNNC2_RANES (P02589) Troponin C, skeletal muscle| Length = 162 Score = 37.0 bits (84), Expect = 0.048 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYS-- 186 +DFEEF + + +A +E + F F++ + I EEL + + S + + Sbjct: 73 IDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDSEELGEILRSSGESITDE 132 Query: 185 ----IVRDWIRPSDGKLSFIGYTKFLHGL 111 +++D + +DGK+ F + K + G+ Sbjct: 133 EIEELMKDGDKNNDGKIDFDEFLKMMEGV 161
>TNNC2_PIG (P02587) Troponin C, skeletal muscle| Length = 159 Score = 37.0 bits (84), Expect = 0.048 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS------S 198 +DFEEF + + +A +E + F F++ + I EELA+ S Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNMDGYIDAEELAEIFRASGEHVTDE 129 Query: 197 AAYSIVRDWIRPSDGKLSFIGYTKFLHGL 111 SI++D + +DG++ F + K + G+ Sbjct: 130 EIESIMKDGDKNNDGRIDFDEFLKMMEGV 158
>TNNC2_HUMAN (P02585) Troponin C, skeletal muscle| Length = 159 Score = 36.6 bits (83), Expect = 0.062 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS------S 198 +DFEEF + + +A +E + F F++ + I EELA+ S Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDE 129 Query: 197 AAYSIVRDWIRPSDGKLSFIGYTKFLHGL 111 S+++D + +DG++ F + K + G+ Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
>CALM_SCHPO (P05933) Calmodulin (CaM)| Length = 150 Score = 36.2 bits (82), Expect = 0.081 Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 2/134 (1%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEPL 372 +R +T++++ R ++L QDG I N ++++ + + D+++ ++ Sbjct: 3 TRNLTDEQIAEFREAFSLFD-RDQDGNIT-SNELGVVMRSLGQSPTAAELQDMINEVDAD 60 Query: 371 AYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAA 192 +DF EF T+ +++ + +E+ AF+ F+++GN IT+EEL + Sbjct: 61 GNGTIDFTEF--LTMMARKMKDTDNEEEVRE-AFKVFDKDGNGYITVEELTHVLTSLGER 117 Query: 191 YS--IVRDWIRPSD 156 S V D IR +D Sbjct: 118 LSQEEVADMIREAD 131
>TNNC2_MELGA (P10246) Troponin C, skeletal muscle| Length = 162 Score = 36.2 bits (82), Expect = 0.081 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYS-- 186 +DFEEF + + +A +E + F F++ + I IEEL + + + + Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132 Query: 185 ----IVRDWIRPSDGKLSFIGYTKFLHGL 111 +++D + +DG++ F + K + G+ Sbjct: 133 EIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>TNNC2_CHICK (P02588) Troponin C, skeletal muscle| Length = 162 Score = 36.2 bits (82), Expect = 0.081 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYS-- 186 +DFEEF + + +A +E + F F++ + I IEEL + + + + Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132 Query: 185 ----IVRDWIRPSDGKLSFIGYTKFLHGL 111 +++D + +DG++ F + K + G+ Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>TNNC1_CHICK (P09860) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 33.9 bits (76), Expect = 0.40 Identities = 25/156 (16%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I +EEL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>TNNC1_PIG (P63317) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 33.5 bits (75), Expect = 0.53 Identities = 25/156 (16%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I +EEL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>TNNC1_MOUSE (P19123) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/156 (15%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I ++EL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>TNNC1_BOVIN (P63315) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 33.5 bits (75), Expect = 0.53 Identities = 25/156 (16%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I +EEL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>TNNC1_RABIT (P02591) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/156 (15%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I ++EL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>TNNC1_HUMAN (P63316) Troponin C, slow skeletal and cardiac muscles (TN-C)| Length = 161 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/156 (15%), Positives = 68/156 (43%), Gaps = 6/156 (3%) Frame = -1 Query: 560 KALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTL 381 KA +TE++ + +++ ++DG I + + + E +++ + Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQ-EMIDEV 64 Query: 380 EPLAYRRMDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLS 201 + +DF+EF + + ++ +E S F F++ + I ++EL + + Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT 124 Query: 200 SAAYS------IVRDWIRPSDGKLSFIGYTKFLHGL 111 + +++D + +DG++ + + +F+ G+ Sbjct: 125 GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>YT67_CAEEL (Q11083) Hypothetical calcium-binding protein B0563.7 in chromosome| X Length = 229 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/105 (26%), Positives = 46/105 (43%) Frame = -1 Query: 539 TEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEPLAYRR 360 T EL R +N+ G I E + A++ A K + +++ ++ Sbjct: 46 TRKELKEYRQLFNMFDTDGS-GAIGNEELKQAMISIGLHANK-AEIDNVIKEVDADGNGE 103 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEE 225 +DFEEF A + Q S +E+ FE F+Q+ N +IT E Sbjct: 104 IDFEEF-CACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENE 147
>TNNC2_ANGAN (P81660) Troponin C, skeletal muscle (TNC)| Length = 160 Score = 32.0 bits (71), Expect = 1.5 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Frame = -1 Query: 359 MDFEEFRAATISPYQLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYS-- 186 +DFEEF + + + + +E + F F++ G+ I EE + + S S Sbjct: 71 IDFEEFLVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFGEILRSSGEPVSEE 130 Query: 185 ----IVRDWIRPSDGKLSFIGYTKFLHGL 111 ++ D + +DGK+ F + K + + Sbjct: 131 EIDELMADGDKNNDGKIDFDEWLKMMENI 159
>MUTS_NEIG1 (Q5F5J4) DNA mismatch repair protein mutS| Length = 864 Score = 32.0 bits (71), Expect = 1.5 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -1 Query: 575 KRAALKALSRAIT------EDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMK 414 +R LK R IT ED+++ + Q L+ DG ++N R AL Q A K Sbjct: 485 RRQTLKNAERFITPELKAFEDKVLTAQDQALALEKQLFDG--VLKNLRTALPQLQK-AAK 541 Query: 413 ESRALDILSTLEPLAYRR 360 + ALD+LST LA R Sbjct: 542 AAAALDVLSTFSALAKER 559
>BPAEB_HUMAN (Q8WXK8) Bullous pemphigoid antigen 1, isoform 7 (Bullous pemphigoid| antigen) (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) (Fragment) Length = 3060 Score = 30.8 bits (68), Expect = 3.4 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 3/108 (2%) Frame = -1 Query: 623 MLVFKLVKAYLRSTPFKRAALKALSRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMA 444 +L+ L+K S A+ +++ + T + L+P S+D CI N + Sbjct: 2847 ILIQNLIKRITTSQLVNEASTVPSDSQMSDSSGVSPMTNSSELKPESRDDPFCIGNLKSE 2906 Query: 443 LLQNSTDAMKESRAL-DILSTLEPLAYRRMDFEEFRAAT--ISPYQLE 309 LL N + S+ + + + L + D E+ R T + P QLE Sbjct: 2907 LLLNILKQDQHSQKITGVFELMRELTHMEYDLEK-RGITSKVLPLQLE 2953
>MUTS_NEIMB (Q9JX94) DNA mismatch repair protein mutS| Length = 864 Score = 30.4 bits (67), Expect = 4.5 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -1 Query: 575 KRAALKALSRAIT------EDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMK 414 +R LK R IT ED+++ + Q L+ DG ++N + AL Q A K Sbjct: 485 RRQTLKNAERFITPELKAFEDKVLTAQEQALALEKQLFDG--VLKNLQTALPQLQK-AAK 541 Query: 413 ESRALDILSTLEPLAYRR 360 + ALD+LST LA R Sbjct: 542 AAAALDVLSTFSALAKER 559
>MUTS_NEIMA (Q9JWT7) DNA mismatch repair protein mutS| Length = 864 Score = 30.4 bits (67), Expect = 4.5 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -1 Query: 575 KRAALKALSRAIT------EDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMK 414 +R LK R IT ED+++ + Q L+ DG ++N + AL Q A K Sbjct: 485 RRQTLKNAERFITPELKAFEDKVLTAQEQALALEKQLFDG--VLKNLQTALPQLQK-AAK 541 Query: 413 ESRALDILSTLEPLAYRR 360 + ALD+LST LA R Sbjct: 542 AAAALDVLSTFSALAKER 559
>MDH_BORPE (Q7VW97) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -1 Query: 353 FEEFRAATISPY---QLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYSI 183 + +FR AT+ QL W+ T + G +I L+ + ++AA Sbjct: 195 YPDFRFATVGGQGLTQLINDDAWNR--DTFIPTVGKRGAAIIEARGLSSAASAANAAIDH 252 Query: 182 VRDWIRPSDGKLSFIG 135 VRDW+ S+GK +G Sbjct: 253 VRDWVLGSNGKWVTMG 268
>MDH_BORPA (Q7W5Q8) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -1 Query: 353 FEEFRAATISPY---QLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYSI 183 + +FR AT+ QL W+ T + G +I L+ + ++AA Sbjct: 195 YPDFRFATVGGQGLTQLINDDAWNR--DTFIPTVGKRGAAIIEARGLSSAASAANAAIDH 252 Query: 182 VRDWIRPSDGKLSFIG 135 VRDW+ S+GK +G Sbjct: 253 VRDWVLGSNGKWVTMG 268
>MDH_BORBR (Q7WD94) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -1 Query: 353 FEEFRAATISPY---QLEASSMWDEIASTAFECFEQEGNRVITIEELAQEMNLSSAAYSI 183 + +FR AT+ QL W+ T + G +I L+ + ++AA Sbjct: 195 YPDFRFATVGGQGLTQLINDDAWNR--DTFIPTVGKRGAAIIEARGLSSAASAANAAIDH 252 Query: 182 VRDWIRPSDGKLSFIG 135 VRDW+ S+GK +G Sbjct: 253 VRDWVLGSNGKWVTMG 268
>SSPB_STAAW (Q8NX99) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAU (Q70UQ8) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAS (Q6GAG5) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAR (Q6GI35) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAN (Q7A6A7) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAM (Q99V46) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>SSPB_STAAC (Q5HH36) Staphopain B precursor (EC 3.4.22.-) (Staphylopain B)| (Staphylococcal cysteine proteinase B) Length = 393 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -1 Query: 551 SRAITEDELIYTRTQYNLLQPSSQDGRICIENFRMALLQNSTDAMKESRALDILSTLEP 375 + AI ED++ Y T N Q F MA L N+T A DI+ TL P Sbjct: 214 NEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYP 272
>MDH_XANOR (Q5H496) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -1 Query: 284 ASTAFECFEQEGNRVITIEELAQEMNLSSAAYSIVRDWIRPSDGKLSFIG 135 AST + G +I L+ + ++AA VRDW+ S+GK +G Sbjct: 218 ASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSNGKWVTMG 267 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,628,964 Number of Sequences: 219361 Number of extensions: 1663472 Number of successful extensions: 3728 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3725 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
