ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags10b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
4emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 76 1e-10
5ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 66 1e-07
6gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence 66 1e-07
7gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 66 1e-07
8gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 66 1e-07
9gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, compl... 66 1e-07
10dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 66 1e-07
11dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 66 1e-07
12dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
13gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, compl... 66 1e-07
14ref|XM_478073.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16emb|BX825815.1|CNS0A7J8 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
17emb|BX822760.1|CNS0A5XU Arabidopsis thaliana Full-length cDNA Co... 52 0.002
18dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
19dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
20dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 52 0.002
21ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 50 0.008
22dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.008
23dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative... 50 0.008
24ref|NM_113250.2| Arabidopsis thaliana S-adenosylmethionine-depen... 48 0.033
25ref|NM_113251.3| Arabidopsis thaliana S-adenosylmethionine-depen... 48 0.033
26gb|AY072507.1| Arabidopsis thaliana cyclopocyclopropane fatty ac... 48 0.033
27gb|AY054671.1| Arabidopsis thaliana cyclopocyclopropane fatty ac... 48 0.033
28emb|BX824497.1|CNS0A7DL Arabidopsis thaliana Full-length cDNA Co... 48 0.033
29emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on ch... 46 0.13
30gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, com... 46 0.13
31emb|AL353695.7| Human DNA sequence from clone RP11-17L7 on chrom... 42 2.1
32gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, comple... 42 2.1
33emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chr... 42 2.1
34emb|AL356800.4|CNS05TDI Human chromosome 14 DNA sequence BAC R-9... 42 2.1
35gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosom... 42 2.1
36gb|BT020452.1| Arabidopsis thaliana At3g23470 mRNA, complete cds 40 8.1
37gb|BT020267.1| Arabidopsis thaliana At3g23470 mRNA, complete cds 40 8.1
38gb|AE017137.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.1
39gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, co... 40 8.1
40gb|AE009952.1| Yersinia pestis KIM, complete genome 40 8.1
41emb|AL162738.12| Human DNA sequence from clone RP5-1110L4 on chr... 40 8.1
42emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 8.1
43emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chr... 40 8.1
44emb|AJ414155.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.1
45emb|BX537301.12| Mouse DNA sequence from clone RP23-127O5 on chr... 40 8.1
46gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, compl... 40 8.1

>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full
            insert sequence
          Length = 2846

 Score =  184 bits (93), Expect = 2e-43
 Identities = 282/345 (81%)
 Strand = Plus / Minus

                                                                        
Query: 252  ggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagccgcagag 311
            ||||||||||| |||| |||||| ||||||| ||  |  || || ||||| || ||  ||
Sbjct: 2638 ggacgagagaatacaatctggtagtctccaagtgtcctggatttaaaaccggctgcgcag 2579

                                                                        
Query: 312  aatatgaggtagtactcccatatacggaggaacctttcatcaaagcccagggccaaaact 371
             ||||||  |||||||||||| |||| | |||| | |||||||||||||||||||||| |
Sbjct: 2578 tatatgaaatagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaatt 2519

                                                                        
Query: 372  tggtctttgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggc 431
            |  ||||| |||||||||||||||||||||||| | ||||||||||| || |||| |  |
Sbjct: 2518 ttatctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtac 2459

                                                                        
Query: 432  ccaatattctcgacatgctctatgcagaaccttgatgacgcggtcatggcagacattata 491
            ||||||||||| || ||||| ||||||| ||||||||  || | |||||||||  |||| 
Sbjct: 2458 ccaatattctcaacgtgctcaatgcagagccttgatgcagcagacatggcagatgttatc 2399

                                                                        
Query: 492  cgggccaaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctt 551
            || | || |||||||||||| ||||||||||||||||| ||||| || |||||||  |||
Sbjct: 2398 cgagtcagagaaggaaggcatccaccagggaatatgtattctttaataaagtctgagctt 2339

                                                         
Query: 552  tttctgtattgctcgtaccgttcctctggaactgagatgaactgg 596
             | | ||| |  || ||||||||||| |||| |||||| ||||||
Sbjct: 2338 ctccggtactcatcataccgttcctccggaattgagataaactgg 2294



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                           
Query: 375     tctttgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggccca 434
               ||||| |||||||||||||||||||||||| | ||||||||||| || |||| |  ||||
Sbjct: 9538995 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 9538936

                                     
Query: 435     atattctcgacatgctctatgc 456
               |||||||| || ||||| ||||
Sbjct: 9538935 atattctcaacgtgctcaatgc 9538914



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 500     agaaggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgta 559
               |||||||||||| ||||||||||||||||| ||||| || |||||||  ||| | | |||
Sbjct: 9538767 agaaggaaggcatccaccagggaatatgtattctttaataaagtctgagcttctccggta 9538708

                                                     
Query: 560     ttgctcgtaccgttcctctggaactgagatgaactgga 597
                |  || ||||||||||| |||| |||||| |||||||
Sbjct: 9538707 ctcatcataccgttcctccggaattgagataaactgga 9538670



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                
Query: 321     tagtactcccatatacggaggaacctttcatcaaagcccagggccaaaa 369
               |||||||||||| |||| | |||| | ||||||||||||||||||||||
Sbjct: 9539455 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaa 9539407



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                           
Query: 375     tctttgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggccca 434
               ||||| |||||||||||||||||||||||| | ||||||||||| || |||| |  ||||
Sbjct: 9538880 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 9538821

                                     
Query: 435     atattctcgacatgctctatgc 456
               |||||||| || ||||| ||||
Sbjct: 9538820 atattctcaacgtgctcaatgc 9538799



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 500     agaaggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgta 559
               |||||||||||| ||||||||||||||||| ||||| || |||||||  ||| | | |||
Sbjct: 9538652 agaaggaaggcatccaccagggaatatgtattctttaataaagtctgagcttctccggta 9538593

                                                     
Query: 560     ttgctcgtaccgttcctctggaactgagatgaactgga 597
                |  || ||||||||||| |||| |||||| |||||||
Sbjct: 9538592 ctcatcataccgttcctccggaattgagataaactgga 9538555



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                
Query: 321     tagtactcccatatacggaggaacctttcatcaaagcccagggccaaaa 369
               |||||||||||| |||| | |||| | ||||||||||||||||||||||
Sbjct: 9539340 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaa 9539292



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>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 375  tctttgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggccca 434
            ||||| |||||||||||||||||||||||| | ||||||||||| || |||| |  ||||
Sbjct: 2306 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 2247

                                  
Query: 435  atattctcgacatgctctatgc 456
            |||||||| || ||||| ||||
Sbjct: 2246 atattctcaacgtgctcaatgc 2225



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 500  agaaggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgta 559
            |||||||||||| ||||||||||||||||| ||||| || |||||||  ||| | | |||
Sbjct: 2078 agaaggaaggcatccaccagggaatatgtattctttaataaagtctgagcttctccggta 2019

                                                  
Query: 560  ttgctcgtaccgttcctctggaactgagatgaactgga 597
             |  || ||||||||||| |||| |||||| |||||||
Sbjct: 2018 ctcatcataccgttcctccggaattgagataaactgga 1981



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 321  tagtactcccatatacggaggaacctttcatcaaagcccagggccaaaa 369
            |||||||||||| |||| | |||| | ||||||||||||||||||||||
Sbjct: 2766 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaa 2718



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>ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23530 mRNA, complete cds
          Length = 3148

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2618 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2570



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>gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence
          Length = 3084

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2592 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2544



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>gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 3149

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2618 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2570



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>gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 2988

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2537 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2489



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>gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, complete cds
          Length = 2604

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2294 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2246



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>dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-10-D10
          Length = 2986

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2526 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2478



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>dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDB19
          Length = 90349

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 6404 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 6356



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>dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169K10, full
            insert sequence
          Length = 1367

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 234/301 (77%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttgcctggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagcc 305
            ||||| || ||||| || |||| |||||| | ||||| ||  ||||||||||| ||||| 
Sbjct: 1119 ttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagct 1060

                                                                        
Query: 306  gcagagaatatgaggtagtactcccatatacggaggaacctttcatcaaagcccagggcc 365
            ||  || ||||||  |||||||||||||| |||| |||| | ||||| || ||||||| |
Sbjct: 1059 gcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccagggac 1000

                                                                        
Query: 366  aaaacttggtctttgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaa 425
               |  |  ||| |||| |||||||||||||||| |||| | ||||| || | |||||| 
Sbjct: 999  tttatctcttctctgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtag 940

                                                                        
Query: 426  ttgggcccaatattctcgacatgctctatgcagaaccttgatgacgcggtcatggcagac 485
            | |  |||||||||||| |  ||||| ||||| | ||| || || | || |||||| || 
Sbjct: 939  tggtacccaatattctccaagtgctcgatgcatagcctcgacgaggtggacatggcggat 880

                                                                        
Query: 486  attatacgggccaaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtct 545
             |||| || | ||| || ||||||||||| ||||| |||||||| || || |||||||||
Sbjct: 879  gttatccgagacaaggatggaaggcaacccccaggaaatatgtattccttgatgaagtct 820

             
Query: 546  g 546
            |
Sbjct: 819  g 819



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>gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, complete cds
          Length = 2604

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2294 aaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctg 2246



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>ref|XM_478073.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttgcctggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagcc 305
            ||||| || ||||| || |||| |||||| | ||||| ||  ||||||||||| ||||| 
Sbjct: 2342 ttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagct 2283

                                                                      
Query: 306  gcagagaatatgaggtagtactcccatatacggaggaacctttcatcaaagcccaggg 363
            ||  || ||||||  |||||||||||||| |||| |||| | ||||| || |||||||
Sbjct: 2282 gcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 2225



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Minus

                                                                            
Query: 246      ttgcctggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagcc 305
                ||||| || ||||| || |||| |||||| | ||||| ||  ||||||||||| ||||| 
Sbjct: 17066587 ttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagct 17066528

                                                                          
Query: 306      gcagagaatatgaggtagtactcccatatacggaggaacctttcatcaaagcccaggg 363
                ||  || ||||||  |||||||||||||| |||| |||| | ||||| || |||||||
Sbjct: 17066527 gcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 17066470



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                            
Query: 504      ggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgtattgc 563
                ||||||||||| ||||| |||||||| || || ||||||||||  ||  | |||||||  
Sbjct: 17064930 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 17064871

                                                  
Query: 564      tcgtaccgttcctctggaactgagatgaactgga 597
                ||||||||||| || || |  |||||||||||||
Sbjct: 17064870 tcgtaccgttcttcagggatggagatgaactgga 17064837



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 379      tgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggcccaatat 438
                |||| |||||||||||||||| |||| | ||||| || | |||||| | |  ||||||||
Sbjct: 17066276 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 17066217

                    
Query: 439      tctc 442
                ||||
Sbjct: 17066216 tctc 17066213



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>emb|BX825815.1|CNS0A7J8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 565

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 513 ccaccagggaatatgtactcttttatgaagtctg 546
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 63  ccaccagggaatatgtattcttttatgaaatctg 30



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>emb|BX822760.1|CNS0A5XU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1371

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 513 ccaccagggaatatgtactcttttatgaagtctg 546
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 956 ccaccagggaatatgtattcttttatgaaatctg 923



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>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0016H06
          Length = 148158

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Minus

                                                                          
Query: 246    ttgcctggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagcc 305
              ||||| || ||||| || |||| |||||| | ||||| ||  ||||||||||| ||||| 
Sbjct: 145998 ttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagct 145939

                                                                        
Query: 306    gcagagaatatgaggtagtactcccatatacggaggaacctttcatcaaagcccaggg 363
              ||  || ||||||  |||||||||||||| |||| |||| | ||||| || |||||||
Sbjct: 145938 gcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 145881



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                          
Query: 504    ggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgtattgc 563
              ||||||||||| ||||| |||||||| || || ||||||||||  ||  | |||||||  
Sbjct: 144341 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 144282

                                                
Query: 564    tcgtaccgttcctctggaactgagatgaactgga 597
              ||||||||||| || || |  |||||||||||||
Sbjct: 144281 tcgtaccgttcttcagggatggagatgaactgga 144248



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 379    tgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggcccaatat 438
              |||| |||||||||||||||| |||| | ||||| || | |||||| | |  ||||||||
Sbjct: 145687 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 145628

                  
Query: 439    tctc 442
              ||||
Sbjct: 145627 tctc 145624



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>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Minus

                                                                         
Query: 246   ttgcctggacgagagaaaacaacctggtaatctccaattgctcgtgacttgaaaccagcc 305
             ||||| || ||||| || |||| |||||| | ||||| ||  ||||||||||| ||||| 
Sbjct: 19713 ttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagct 19654

                                                                       
Query: 306   gcagagaatatgaggtagtactcccatatacggaggaacctttcatcaaagcccaggg 363
             ||  || ||||||  |||||||||||||| |||| |||| | ||||| || |||||||
Sbjct: 19653 gcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 19596



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                         
Query: 504   ggaaggcaaccaccagggaatatgtactcttttatgaagtctggcctttttctgtattgc 563
             ||||||||||| ||||| |||||||| || || ||||||||||  ||  | |||||||  
Sbjct: 18056 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 17997

                                               
Query: 564   tcgtaccgttcctctggaactgagatgaactgga 597
             ||||||||||| || || |  |||||||||||||
Sbjct: 17996 tcgtaccgttcttcagggatggagatgaactgga 17963



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 379   tgttggccatgaagttgtccctccagtgcatcagagttgtgtagtaattgggcccaatat 438
             |||| |||||||||||||||| |||| | ||||| || | |||||| | |  ||||||||
Sbjct: 19402 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 19343

                 
Query: 439   tctc 442
             ||||
Sbjct: 19342 tctc 19339



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>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 513   ccaccagggaatatgtactcttttatgaagtctg 546
             ||||||||||||||||| ||||||||||| ||||
Sbjct: 86236 ccaccagggaatatgtattcttttatgaaatctg 86203



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>ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23510 mRNA, complete cds
          Length = 3062

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||| |||  |||||||||||||||| ||||| ||||| ||||
Sbjct: 2597 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaaatctg 2549



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>dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEE5
          Length = 20724

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 498   aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
             |||||||||| |||  |||||||||||||||| ||||| ||||| ||||
Sbjct: 17687 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaaatctg 17639



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 7229 aaagaaggaagacatccaccagggaatatgta 7198



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 2594 aaagaaggaagacatccaccagggaatatgta 2563



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>dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative
            cyclopropane-fatty-acyl-phospholipid synthase, complete
            cds, clone: RAFL16-79-F04
          Length = 3062

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 498  aaagaaggaaggcaaccaccagggaatatgtactcttttatgaagtctg 546
            |||||||||| |||  |||||||||||||||| ||||| ||||| ||||
Sbjct: 2597 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaaatctg 2549



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>ref|NM_113250.2| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ cyclopropane-fatty-acyl-phospholipid
            synthase AT3G23470 mRNA, complete cds
          Length = 1467

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 1106 aaagaaggaagacatccaccagggaatatgta 1075



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>ref|NM_113251.3| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ cyclopropane-fatty-acyl-phospholipid
            synthase AT3G23480 mRNA, complete cds
          Length = 1640

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 1140 aaagaaggaagacatccaccagggaatatgta 1109



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>gb|AY072507.1| Arabidopsis thaliana cyclopocyclopropane fatty acid synthase-like
            protein (At3g23480; MEE5.2) mRNA, complete cds
          Length = 1143

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 1123 aaagaaggaagacatccaccagggaatatgta 1092



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>gb|AY054671.1| Arabidopsis thaliana cyclopocyclopropane fatty acid synthase-like
            protein (At3g23480; MEE5.2) mRNA, complete cds
          Length = 1789

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 1196 aaagaaggaagacatccaccagggaatatgta 1165



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>emb|BX824497.1|CNS0A7DL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH52ZB07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1682

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || |||||||||||||||||
Sbjct: 1202 aaagaaggaagacatccaccagggaatatgta 1171



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>emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on chromosome 10 Contains the
             5' end of the PPP3CB gene for protein phosphatase 3
             (formerly 2B) catalytic subunit beta isoform (calcineurin
             A beta), two novel genes (FLJ37318), the 3' end of a novel
             gene, a ribosomal protein S26 (RPS26) pseudogene and a CpG
             island, complete sequence
          Length = 152161

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 261   aaaacaacctggtaatctccaat 283
             |||||||||||||||||||||||
Sbjct: 43260 aaaacaacctggtaatctccaat 43282



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>gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, complete sequence
          Length = 190681

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 261    aaaacaacctggtaatctccaat 283
              |||||||||||||||||||||||
Sbjct: 177522 aaaacaacctggtaatctccaat 177500



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>emb|AL353695.7| Human DNA sequence from clone RP11-17L7 on chromosome 9 Contains the 5'
             end of the FUBP3 gene for far upstream element (FUSE)
             binding protein 3 (FBP3) and a CpG island, complete
             sequence
          Length = 84661

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    aaaaactaaccattgcatggt 78
             |||||||||||||||||||||
Sbjct: 50640 aaaaactaaccattgcatggt 50660



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>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence
          Length = 171468

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    actaaccattgcatggttaaa 82
             |||||||||||||||||||||
Sbjct: 96929 actaaccattgcatggttaaa 96949



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>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete
            sequence
          Length = 158763

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 501  gaaggaaggcaaccaccaggg 521
            |||||||||||||||||||||
Sbjct: 4786 gaaggaaggcaaccaccaggg 4806



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>emb|AL356800.4|CNS05TDI Human chromosome 14 DNA sequence BAC R-97N10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163152

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     ttctgaaaattctagttaatt 33
              |||||||||||||||||||||
Sbjct: 128648 ttctgaaaattctagttaatt 128668



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>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence
          Length = 223399

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 501   gaaggaaggcaaccaccaggg 521
             |||||||||||||||||||||
Sbjct: 49623 gaaggaaggcaaccaccaggg 49643



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>gb|BT020452.1| Arabidopsis thaliana At3g23470 mRNA, complete cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || || ||||||||||||||
Sbjct: 1070 aaagaaggaagacatccgccagggaatatgta 1039



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>gb|BT020267.1| Arabidopsis thaliana At3g23470 mRNA, complete cds
          Length = 1467

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 498  aaagaaggaaggcaaccaccagggaatatgta 529
            ||||||||||| || || ||||||||||||||
Sbjct: 1106 aaagaaggaagacatccgccagggaatatgta 1075



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>gb|AE017137.1| Yersinia pestis biovar Medievalis str. 91001 section 11 of 16 of the
             complete genome
          Length = 291817

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctaaccattgcatggttaaa 82
             ||||||||||||||||||||
Sbjct: 63403 ctaaccattgcatggttaaa 63384



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>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence
          Length = 172081

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    ccaaagaaggaaggcaacca 515
              ||||||||||||||||||||
Sbjct: 104089 ccaaagaaggaaggcaacca 104108



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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 63      ctaaccattgcatggttaaa 82
               ||||||||||||||||||||
Sbjct: 1582027 ctaaccattgcatggttaaa 1582046



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>emb|AL162738.12| Human DNA sequence from clone RP5-1110L4 on chromosome 1p35.3-36.13
              Contains the 5' end of a novel gene, complete sequence
          Length = 121828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ccaaagaaggaaggcaacca 515
              ||||||||||||||||||||
Sbjct: 104288 ccaaagaaggaaggcaacca 104269



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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      ctaaccattgcatggttaaa 82
               ||||||||||||||||||||
Sbjct: 3281270 ctaaccattgcatggttaaa 3281251



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>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete
              sequence
          Length = 215657

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    tcaaggctggcctagacgac 243
              ||||||||||||||||||||
Sbjct: 137571 tcaaggctggcctagacgac 137552



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>emb|AJ414155.1| Yersinia pestis strain CO92 complete genome; segment 15/20
          Length = 205050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctaaccattgcatggttaaa 82
             ||||||||||||||||||||
Sbjct: 37626 ctaaccattgcatggttaaa 37607



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>emb|BX537301.12| Mouse DNA sequence from clone RP23-127O5 on chromosome 4, complete
             sequence
          Length = 103179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aattctgaaaattctagtta 30
             ||||||||||||||||||||
Sbjct: 60757 aattctgaaaattctagtta 60776



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>gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, complete sequence
          Length = 183998

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   atgagcgaatcattccagga 143
             ||||||||||||||||||||
Sbjct: 55266 atgagcgaatcattccagga 55247


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,790,922
Number of Sequences: 3902068
Number of extensions: 4790922
Number of successful extensions: 77491
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77286
Number of HSP's gapped (non-prelim): 201
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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