>emb|X94296.1|HVRL24E H.vulgare mRNA for L24 ribosomal protein
          Length = 708

 Score =  391 bits (197), Expect = e-106
 Identities = 215/224 (95%)
 Strand = Plus / Minus

                                                                       
Query: 7   aaaaggtgcaaattcaagagggcanggtaacttgagaaaggnctatgatngtaggatagg 66
           |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 664 aaaaggtgcaaattcaagagggcaaggtaacttgagaaaggtctatgatagtaggatagg 605

                                                                       
Query: 67  ataagaaacaaggctaggcagcacaactctatgtntatgatgnaatngactttcaacgct 126
           |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 604 ataagaaacaaggctaggcagcacaactctatgtctatgatgtaatcgactttcaacgct 545

                                                                       
Query: 127 tgccgccgncaccgccaagctttgggcccttggaacccttctgcacggcacccttgcccc 186
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgccgccgccaccgccaagctttgggcccttggaacccttctgcacggcacccttgcccc 485

                                                       
Query: 187 cctgtgacttctgggactnggncacctctgccttcttggccttc 230
           |||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 484 cctgtgacttctgggacttggtcacctctgccttcttggccttc 441

>gb|BT018227.1| Zea mays clone EL01N0561F11.c mRNA sequence
          Length = 1335

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 94/115 (81%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                        
Query: 116  ctttcaacgcttgccgccgncaccgccaagctttgggcccttggaacccttctgcacggc 175
            |||||| |||||||| ||| |||| || | ||| |||||||||||||||||||| || ||
Sbjct: 1111 ctttcagcgcttgccaccgccaccacccaacttggggcccttggaacccttctggaccgc 1052

                                                                   
Query: 176  acccttgcccccctgtgacttctgggactnggncacctctgccttcttggccttc 230
             |||||   |  ||||| ||||||||||| || |||||| ||||| || ||||||
Sbjct: 1051 tccctt---cgtctgtgccttctgggacttggtcacctcagcctttttcgccttc 1000

>gb|BT018224.1| Zea mays clone EL01N0561E06.c mRNA sequence
          Length = 767

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 94/115 (81%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                       
Query: 116 ctttcaacgcttgccgccgncaccgccaagctttgggcccttggaacccttctgcacggc 175
           |||||| |||||||| ||| |||| || | ||| |||||||||||||||||||| || ||
Sbjct: 589 ctttcagcgcttgccaccgccaccacccaacttggggcccttggaacccttctggaccgc 530

                                                                  
Query: 176 acccttgcccccctgtgacttctgggactnggncacctctgccttcttggccttc 230
            |||||   |  ||||| ||||||||||| || |||||| ||||| || ||||||
Sbjct: 529 tccctt---cgtctgtgccttctgggacttggtcacctcagcctttttcgccttc 478

>gb|BT016435.1| Zea mays clone Contig268 mRNA sequence
          Length = 793

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 150 gggcccttggaacccttctgcacggcaccctt 181
           |||||||||||||||||||| || ||||||||
Sbjct: 568 gggcccttggaacccttctggaccgcaccctt 537

>gb|BT017947.1| Zea mays clone EL01N0521F01.c mRNA sequence
          Length = 859

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 150 gggcccttggaacccttctgcacggcaccctt 181
           |||||||||||||||||||| || ||||||||
Sbjct: 622 gggcccttggaacccttctggaccgcaccctt 591

>ref|XM_475453.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 486

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 77/95 (81%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 136 caccgccaagctttgggcccttggaacccttctgcacggcacccttgcccccctgtgact 195
           |||| |||| ||| ||||||||||||||| || |  ||||||||||   |  ||| ||||
Sbjct: 469 caccaccaatcttcgggcccttggaacccctcggggcggcaccctt---cgactgcgact 413

                                              
Query: 196 tctgggactnggncacctctgccttcttggccttc 230
           ||||||||| ||  ||||| |||||||| ||||||
Sbjct: 412 tctgggacttggttacctcagccttcttcgccttc 378

>gb|BT016791.1| Zea mays clone Contig624 mRNA sequence
          Length = 772

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 194 cttctgggactnggncacctctgccttcttggccttc 230
           ||||||||||| || |||||| |||||||| ||||||
Sbjct: 519 cttctgggacttggacacctcagccttcttcgccttc 483

>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
             complete sequence
          Length = 127642

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 77/95 (81%), Gaps = 3/95 (3%)
 Strand = Plus / Plus

                                                                         
Query: 136   caccgccaagctttgggcccttggaacccttctgcacggcacccttgcccccctgtgact 195
             |||| |||| ||| ||||||||||||||| || |  ||||||||||   |  ||| ||||
Sbjct: 75802 caccaccaatcttcgggcccttggaacccctcggggcggcaccctt---cgactgcgact 75858

                                                
Query: 196   tctgggactnggncacctctgccttcttggccttc 230
             ||||||||| ||  ||||| |||||||| ||||||
Sbjct: 75859 tctgggacttggttacctcagccttcttcgccttc 75893

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 77/95 (81%), Gaps = 3/95 (3%)
 Strand = Plus / Plus

                                                                            
Query: 136      caccgccaagctttgggcccttggaacccttctgcacggcacccttgcccccctgtgact 195
                |||| |||| ||| ||||||||||||||| || |  ||||||||||   |  ||| ||||
Sbjct: 23794981 caccaccaatcttcgggcccttggaacccctcggggcggcaccctt---cgactgcgact 23795037

                                                   
Query: 196      tctgggactnggncacctctgccttcttggccttc 230
                ||||||||| ||  ||||| |||||||| ||||||
Sbjct: 23795038 tctgggacttggttacctcagccttcttcgccttc 23795072

>dbj|AK059430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F02, full
           insert sequence
          Length = 779

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 77/95 (81%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 136 caccgccaagctttgggcccttggaacccttctgcacggcacccttgcccccctgtgact 195
           |||| |||| ||| ||||||||||||||| || |  ||||||||||   |  ||| ||||
Sbjct: 566 caccaccaatcttcgggcccttggaacccctcggggcggcaccctt---cgactgcgact 510

                                              
Query: 196 tctgggactnggncacctctgccttcttggccttc 230
           ||||||||| ||  ||||| |||||||| ||||||
Sbjct: 509 tctgggacttggttacctcagccttcttcgccttc 475

>gb|AY109363.1| Zea mays CL303_3 mRNA sequence
          Length = 1436

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 116  ctttcaacgcttgccgccgncaccgccaagctttgggcccttggaacccttctg 169
            |||||| |||||||| ||| | || || | ||| ||||||||||||||||||||
Sbjct: 1303 ctttcagcgcttgccaccgccgccacccaacttggggcccttggaacccttctg 1250

>gb|AY310816.1| Nicotiana benthamiana clone 12-370 unknown mRNA
          Length = 476

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 209 cacctctgccttcttggccttc 230
           ||||||||||||||||||||||
Sbjct: 240 cacctctgccttcttggccttc 219

>gb|DQ268857.1| Solanum tuberosum clone 174B08 ribosomal protein L24-like protein
           mRNA, complete cds
          Length = 706

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 209 cacctctgccttcttggccttc 230
           ||||||||||||||||||||||
Sbjct: 446 cacctctgccttcttggccttc 425

>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23,
             complete sequence
          Length = 142154

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    aggataagaaacaaggctagg 84
             |||||||||||||||||||||
Sbjct: 42519 aggataagaaacaaggctagg 42499

>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4
             Contains the 5'end of the SYN1 gene for synapsin I, the
             PFC gene for properdin P factor (complement), the ELK1
             member of the ETS oncogene family, the UTX gene for
             ubiquitously-expressed transcript, an SMS (spermine
             synthase) pseudogene, a novel gene (LOC286403) and three
             CpG islands, complete sequence
          Length = 156601

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    aggataagaaacaaggctagg 84
             |||||||||||||||||||||
Sbjct: 95869 aggataagaaacaaggctagg 95849


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,283,959
Number of Sequences: 3902068
Number of extensions: 1283959
Number of successful extensions: 21517
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21491
Number of HSP's gapped (non-prelim): 26
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)