Clone Information

BLAST Search Result

Clone Name	rbags10a22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-resp...	169	5e-42
2	MSI5_ARATH (Q9SU78) WD-40 repeat protein MSI5	165	1e-40
3	RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
4	RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblas...	78	2e-14
5	RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblas...	78	2e-14
6	RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
7	RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
8	RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
9	RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
10	RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblasto...	78	2e-14
11	MSI3_ARATH (O22469) WD-40 repeat protein MSI3	76	9e-14
12	MSI2_ARATH (O22468) WD-40 repeat protein MSI2	75	1e-13
13	RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblasto...	75	1e-13
14	RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblasto...	75	2e-13
15	CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chrom...	74	3e-13
16	RBBP7_RAT (Q71UF4) Histone-binding protein RBBP7 (Retinoblastoma...	74	3e-13
17	RBBP7_MOUSE (Q60973) Histone-binding protein RBBP7 (Retinoblasto...	74	3e-13
18	RBBP7_MACFA (Q4R304) Histone-binding protein RBBP7 (Retinoblasto...	74	3e-13
19	RBBP7_HUMAN (Q16576) Histone-binding protein RBBP7 (Retinoblasto...	74	3e-13
20	RBBP7_PONPY (Q5R654) Histone-binding protein RBBP7 (Retinoblasto...	74	3e-13
21	LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Ab...	74	5e-13
22	RBBP7_XENTR (Q6P315) Histone-binding protein RBBP7 (Retinoblasto...	73	6e-13
23	RBBP7_XENLA (Q8AVH1) Histone-binding protein RBBP7 (Retinoblasto...	73	6e-13
24	RBBP7_CHICK (Q9I8G9) Histone-binding protein RBBP7 (Retinoblasto...	73	8e-13
25	RBBP7_BOVIN (Q3SWX8) Histone-binding protein RBBP7 (Retinoblasto...	72	1e-12
26	HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (...	65	2e-10
27	HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (...	64	4e-10
28	HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (...	63	6e-10
29	HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (...	62	1e-09
30	HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (...	62	2e-09
31	MSI1_LYCES (O22466) WD-40 repeat protein MSI1	61	2e-09
32	HAT2_CRYNE (Q5KDT9) Histone acetyltransferase type B subunit 2 (...	60	5e-09
33	MSI1_ARATH (O22467) WD-40 repeat protein MSI1 (Protein MULTICOPY...	59	1e-08
34	RBA1_CAEEL (P90917) Probable histone-binding protein rba-1	55	2e-07
35	HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (...	54	3e-07
36	HAT2_USTMA (Q4P553) Histone acetyltransferase type B subunit 2 (...	54	3e-07
37	HAT2_KLULA (Q6CSI1) Histone acetyltransferase type B subunit 2 (...	47	5e-05
38	HAT2_DEBHA (Q6BK34) Histone acetyltransferase type B subunit 2 (...	43	7e-04
39	HAT2_YEAST (P39984) Histone acetyltransferase type B subunit 2 (...	43	7e-04
40	PRW1_SCHPO (O14021) RbAp48-related WD40-repeat protein prw1	42	0.001
41	HAT2_ASHGO (Q75C99) Histone acetyltransferase type B subunit 2 (...	41	0.003
42	HAT2_CANAL (Q59RH5) Histone acetyltransferase type B subunit 2 (...	40	0.004
43	MSI1_YEAST (P13712) Chromatin assembly factor 1 subunit p50 (CAF...	39	0.016
44	HAT2_CANGA (Q6FXI8) Histone acetyltransferase type B subunit 2 (...	37	0.062
45	GRWD1_RAT (Q5XI13) Glutamate-rich WD repeat-containing protein 1	34	0.40
46	YSK4_HUMAN (Q56UN5) SPS1/STE20-related protein kinase YSK4 (EC 2...	32	1.2
47	AGRN_RAT (P25304) Agrin precursor	32	1.2
48	GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein...	32	1.5
49	GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1	32	1.5
50	FRIGI_ARATH (Q9FDW0) FRIGIDA protein	32	1.5
51	RRB1_YEAST (Q04225) Ribosome assembly protein RRB1	31	2.6
52	DYI3_ANTCR (Q16960) Dynein intermediate chain 3, ciliary	31	2.6
53	MUTS_METBF (Q46CE2) DNA mismatch repair protein mutS	31	3.4
54	WDR26_MOUSE (Q8C6G8) WD-repeat protein 26	31	3.4
55	WDR26_HUMAN (Q9H7D7) WD-repeat protein 26	31	3.4
56	L_CDVO (P24658) Large structural protein (Protein L) (Transcript...	31	3.4
57	GAT24_ARATH (Q5HZ36) GATA transcription factor 24	30	4.4
58	ZN229_HUMAN (Q9UJW7) Zinc finger protein 229 (Fragment)	30	5.8
59	WDR17_HUMAN (Q8IZU2) WD-repeat protein 17	30	5.8
60	CORO_CAEEL (Q21624) Coronin-like protein cor-1	30	7.6
61	KUP_PSEAE (Q9I540) Probable potassium transport system protein kup	30	7.6
62	AGRN_HUMAN (O00468) Agrin precursor	30	7.6
63	NUP43_MOUSE (P59235) Nucleoporin Nup43	29	9.9
64	GEMI5_MOUSE (Q8BX17) Gem-associated protein 5 (Gemin5)	29	9.9
65	GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subu...	29	9.9

>MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-responsive gene 1|
           protein)
          Length = 507

 Score =  169 bits (429), Expect = 5e-42
 Identities = 77/117 (65%), Positives = 91/117 (77%), Gaps = 2/117 (1%)
 Frame = -1

Query: 623 LCVQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKN--PNSPGGLFFQHAGHRDKIVDFHW 450
           LCVQWSPDK+SVFGSSAEDG LN+WD+++V KK +    SP GLFFQHAGHRDK+VDFHW
Sbjct: 390 LCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHW 449

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELETFKSHLASCTPR 279
           N+SDPWTI              TLQIWRMSDLIYRPE+EV++ELE FKSH+ +C  +
Sbjct: 450 NASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELEKFKSHVMTCASK 506

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>MSI5_ARATH (Q9SU78) WD-40 repeat protein MSI5|
          Length = 487

 Score =  165 bits (417), Expect = 1e-40
 Identities = 77/118 (65%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
 Frame = -1

Query: 623 LCVQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKN--PNSPGGLFFQHAGHRDKIVDFHW 450
           LCVQWSPDK+SVFGSSAEDG LN+WD ++VGKK      +P GLFFQHAGHRDK+VDFHW
Sbjct: 370 LCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAGHRDKVVDFHW 429

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELETFKSHLASCTPRA 276
           +  +PWTI              TLQIWRMSDLIYRPEDEVL+ELE FKSH+ +CT ++
Sbjct: 430 SLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDEVLTELEKFKSHVFTCTSKS 487

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>RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 423

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblastoma-binding|
           protein 4-B) (RBBP-4-B) (Retinoblastoma-binding protein
           p48-B)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblastoma-binding|
           protein 4-A) (RBBP-4-A) (Retinoblastoma-binding protein
           p48-A)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ IY  ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDED 412

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>MSI3_ARATH (O22469) WD-40 repeat protein MSI3|
          Length = 424

 Score = 75.9 bits (185), Expect = 9e-14
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKK------NPNSPGGLFFQHAGHRDKIVDF 456
           V+W P+  +V  SS ED  L VWD  +VG ++        + P  L F H GH+ KI DF
Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDF 370

Query: 455 HWNSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDE 333
            WN  +PW I              +LQ+W+M++ IYR +DE
Sbjct: 371 AWNKDEPWVI-------SSVAEDNSLQVWQMAESIYREDDE 404

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>MSI2_ARATH (O22468) WD-40 repeat protein MSI2|
          Length = 415

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKK------NPNSPGGLFFQHAGHRDKIVDF 456
           V+W P+  +V  SS ED  L VWD  +VG+++        + P  L F H GH+ KI DF
Sbjct: 310 VEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDF 369

Query: 455 HWNSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDE 333
            WN ++PW I              +LQ+W+M++ IYR E++
Sbjct: 370 AWNKNEPWVI-------ASVAEDNSLQVWQMAESIYRDEED 403



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWN 447
           + WSP K     S ++D  + +WD     + K  N+     F + GH   I D  W+
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNA----MFVYEGHESAIADVSWH 226



 Score = 29.3 bits (64), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWD 546
           V W     ++FGS+ EDG L +WD
Sbjct: 223 VSWHMKNENLFGSAGEDGRLVIWD 246

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>RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 426

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +Q+W+M++ IY  E  D   SELE
Sbjct: 383 NPNEPWVI-------CSVSEDNIMQVWQMAENIYNDEEPDTPASELE 422

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>RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  LNVWD  K+G++++P    + P  L F H GH  KI DF W
Sbjct: 322 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           N ++PW I               +Q+W+M++ I   ED
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQVWQMAENINNDED 412

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>CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chromatin assembly|
           factor 1 p55 subunit) (CAF-1 p55 subunit) (dCAF-1)
           (Nucleosome remodeling factor 55 kDa subunit) (NURF-55)
          Length = 430

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  L+VWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVL--SELET 312
           N ++PW I               +Q+W+M++ +Y  E+  +  SELET
Sbjct: 387 NPNEPWII-------CSVSEDNIMQVWQMAENVYNDEEPEIPASELET 427

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>RBBP7_RAT (Q71UF4) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421

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>RBBP7_MOUSE (Q60973) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
           (Histone acetyltransferase type B subunit 2)
          Length = 425

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTASELE 421

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>RBBP7_MACFA (Q4R304) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421

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>RBBP7_HUMAN (Q16576) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
           (Histone acetyltransferase type B subunit 2)
          Length = 425

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421

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>RBBP7_PONPY (Q5R654) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 426

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 323 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 383 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTTSELE 422

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>LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Abnormal cell|
           lineage protein 53)
          Length = 417

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           VQWSP   ++  SS  D  L+VWD  K+G+ ++     + P  L F H GH  KI DF W
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDE 333
           N ++PW +               LQ+W+M+D IY   DE
Sbjct: 375 NPNEPWVV-------CSVSEDNILQVWQMADNIYNEVDE 406

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>RBBP7_XENTR (Q6P315) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEEPDIPASELE 421

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>RBBP7_XENLA (Q8AVH1) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D   SELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEEPDIPASELE 421

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>RBBP7_CHICK (Q9I8G9) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
          Length = 424

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELE 315
           N ++PW I               +QIW+M++ IY  E+  ++  E
Sbjct: 381 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418

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>RBBP7_BOVIN (Q3SWX8) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V WSP   ++  SS  D  LNVWD  K+G++++     + P  L F H GH  KI DF W
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE--DEVLSELE 315
           N ++PW I               +QIW+M++ IY  E  D    ELE
Sbjct: 382 NPNEPWVI-------CSVSEDNIMQIWQMAENIYNDEESDVTTPELE 421

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>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           + W P + +V  S++ D  +  WD  + G+++ P    + P  L FQH GH ++I DF W
Sbjct: 336 ISWHPFEEAVLASASYDRKIAFWDLSRAGEEQTPEDAQDGPPELLFQHGGHTNRISDFSW 395

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRP--EDEVLSELE 315
           N +DPW +               LQ+W+++D I     ED    ELE
Sbjct: 396 NLNDPWVL-------CSAAEDNLLQVWKVADAIVGKDLEDVPTEELE 435

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>HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 452

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWD----HEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHW 450
           VQW P + SV  S   D  + VWD    H+ +   +N   P  L F H GH  +I DF W
Sbjct: 352 VQWCPHQPSVLASGGHDRAILVWDIARLHDDLSSDENDEGPPELLFHHGGHSSRISDFDW 411

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE 339
           + + PW I               +Q+WRM++ I   E
Sbjct: 412 HPTLPWVI-------ASAAEDNVIQVWRMAESISNDE 441

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>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 423

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = -1

Query: 611 WSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS----PGGLFFQHAGHRDKIVDFHWNS 444
           W P +A + GS++ D  +  WD  +VG+++ P+     P  L F H GH + + DF WN 
Sbjct: 325 WHPTEAGILGSASYDRRIIFWDLSRVGEEQLPDDQDDGPPELLFMHGGHTNHLADFSWNP 384

Query: 443 SDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPED 336
           ++PW +               LQIW++++ I   +D
Sbjct: 385 NEPWLV-------ASAAEDNLLQIWKVAESIVGKDD 413

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>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS----PGGLFFQHAGHRDKIVDFHW 450
           + W P + SV  S++ D  +  WD  + G+++ P+     P  L F H GH ++I DF W
Sbjct: 336 LSWHPFEESVLASASYDRKIMFWDLSRSGEEQTPDDAQDGPPELLFMHGGHTNRISDFSW 395

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRP--EDEVLSELE 315
           N +DPW +               LQ+W+++D I     ED    ELE
Sbjct: 396 NLNDPWVL-------CSAAEDNLLQVWKVADAIVGKDLEDVPTEELE 435

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>HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 564

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS----PGGLFFQHAGHRDKIVDFHW 450
           ++W P ++++ GS + D  L  WD  +VG ++  +     P  L F H GH + + DF W
Sbjct: 338 LEWHPTESAILGSGSYDRRLLFWDISRVGDEQTQDDAEDGPPELLFMHGGHTNHLADFSW 397

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELE 315
           N +DPW +               LQIW++++ I   E   +S  E
Sbjct: 398 NRNDPWLV-------CSAAEDNLLQIWKVANSIVSKEPADMSTPE 435

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>MSI1_LYCES (O22466) WD-40 repeat protein MSI1|
          Length = 424

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           V W+P   ++  S      L VWD  ++ +++ P    + P  L F H GH  KI DF W
Sbjct: 323 VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSW 382

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEV 330
           N  + W +               LQIW+M++ IY  ED++
Sbjct: 383 NPCEDWVV-------ASVAEDNILQIWQMAENIYHDEDDL 415

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>HAT2_CRYNE (Q5KDT9) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 435

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
 Frame = -1

Query: 623 LCVQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS----PGGLFFQHAGHRDKIVDF 456
           L + WSP     F S++ D  +++WD + +G ++ P+     P  L F H GH  K+ D 
Sbjct: 334 LQLSWSPTSPVHFASASADRRVHIWDLDAIGAEQTPDDAEDGPPELLFVHGGHTSKVCDI 393

Query: 455 HWNSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSE 321
            W+ S PWTI               LQ+W  S  +  P +    E
Sbjct: 394 SWSPSSPWTI-------ASASEDNILQVWEPSRHLRTPYEAEFDE 431



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWD 546
           V+W P   ++FGS ++DG + +WD
Sbjct: 246 VEWHPKNENMFGSVSDDGQIMIWD 269

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>MSI1_ARATH (O22467) WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF|
           IRA 1) (Protein medicis)
          Length = 424

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKN----PNSPGGLFFQHAGHRDKIVDFHW 450
           V W+P   ++  S      L VWD  ++ +++      + P  L F H GH  KI DF W
Sbjct: 323 VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSW 382

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSE 321
           N  + W I               LQIW+M++ IY  ED+   E
Sbjct: 383 NPCEDWVI-------SSVAEDNILQIWQMAENIYHDEDDAPGE 418

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>RBA1_CAEEL (P90917) Probable histone-binding protein rba-1|
          Length = 412

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS------PGGLFFQHAGHRDKIVDF 456
           V +SP   +V  SS  D  + VWD  K+    + ++      P  + F HAGH  K+ DF
Sbjct: 314 VSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADF 373

Query: 455 HWNSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE 339
            WN + PWTI               LQ+W +S+ +   E
Sbjct: 374 SWNPNRPWTI-------CSSDEFNALQVWEVSNSLVSSE 405

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>HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 430

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDFHW 450
           ++WSP    +  SS+ D  + +WD EK+G+++ P    +    L F H GH ++I +F W
Sbjct: 331 LEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSW 390

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIY 348
             ++ W +               LQIW  S +I+
Sbjct: 391 CPNERWVV-------GSLADDNILQIWSPSRVIW 417

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>HAT2_USTMA (Q4P553) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 485

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
 Frame = -1

Query: 623 LCVQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP----NSPGGLFFQHAGHRDKIVDF 456
           L V WSP  A+V  S++ D  +N+WD  K+G+++ P    + P  L F H GH  +  D 
Sbjct: 384 LSVCWSPHHATVLASASADRRVNLWDLSKIGQEQTPDDAEDGPPELIFVHGGHTSRPTDL 443

Query: 455 HWNSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLS 324
            W+    W +               + +WR S  +    +E L+
Sbjct: 444 AWSPHMEWAL-------TSAAEDNIVMVWRPSKAVIDTGNEELT 480

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>HAT2_KLULA (Q6CSI1) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 408

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGG----LFFQHAGHRDKIVDFHW 450
           +++SP +  +  SS  D  + +WD   +G ++ P+        LF  H GHR  + +F  
Sbjct: 307 LEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSH 366

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRP 342
           NS+ PW +               LQIW+ ++ I RP
Sbjct: 367 NSNVPWLM-------CSVEEENVLQIWKPANKIVRP 395

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>HAT2_DEBHA (Q6BK34) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 415

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKK-NPNSPGG---LFFQHAGHRDKIVDFHW 450
           +++SP K  +  S ++D  L +WD  KVG+++   ++  G   LF  HAGH   + D  W
Sbjct: 315 LEFSPHKDGMLASGSQDRRLILWDLFKVGEEQAQEDAEDGCPELFMMHAGHTGAVTDLSW 374

Query: 449 NSSDPWTI 426
                WTI
Sbjct: 375 CPYKDWTI 382

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>HAT2_YEAST (P39984) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 401

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGG----LFFQHAGHRDKIVDFHW 450
           +++S     V  SS  D  L +WD +++G ++ P+        L   HAGHR  + DF  
Sbjct: 301 LEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDL 360

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMS 360
           N   PW +               LQ+W+ S
Sbjct: 361 NPQIPWLV-------ASAEEENILQVWKCS 383

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>PRW1_SCHPO (O14021) RbAp48-related WD40-repeat protein prw1|
          Length = 431

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGK----KKNPNSPGGLFFQHAGHRDKIVDFHW 450
           + +SP +  +  S++ D    VWD  ++G+    ++  + P  L F H GH    +D  W
Sbjct: 331 ISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDW 390

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPE 339
             +  WT+               LQIW  S  I+  E
Sbjct: 391 CPNYNWTM-------ATAAEDNILQIWTPSRSIWGNE 420

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>HAT2_ASHGO (Q75C99) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 423

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGG----LFFQHAGHRDKIVDFHW 450
           V++SP    +  SS  D    +WD  ++G +++ +        L   HAGHR  + +F +
Sbjct: 323 VEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQSQDDADDGAPELMMMHAGHRSPVNEFSF 382

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSE 321
           N   PW +               +Q W++S  +       +S+
Sbjct: 383 NPQIPWLL-------ASTEEDNVIQAWKVSMKLVNASPPAISD 418

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>HAT2_CANAL (Q59RH5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 382

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -1

Query: 620 CVQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGG----LFFQHAGHRDKIVDFH 453
           C+++SP    +  + ++D  + +WD  KVG+++           LF  HAGH   + D  
Sbjct: 282 CMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLS 341

Query: 452 WNSSDPWTI 426
           W     W I
Sbjct: 342 WCPFKDWMI 350

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>MSI1_YEAST (P13712) Chromatin assembly factor 1 subunit p50 (CAF-1 p50|
           subunit) (MSI1 protein) (IRA1 multicopy suppressor)
          Length = 422

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSA-EDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSS 441
           ++WSP+  +V  ++  EDG + +WD           S     F H GH   + D  W++ 
Sbjct: 346 LEWSPNFDTVLATAGQEDGLVKLWD----------TSCEETIFTHGGHMLGVNDISWDAH 395

Query: 440 DPW 432
           DPW
Sbjct: 396 DPW 398

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>HAT2_CANGA (Q6FXI8) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 419

 Score = 36.6 bits (83), Expect = 0.062
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS----PGGLFFQHAGHRDKIVDFHW 450
           +++ P+   +  SS  D    VWD +++G ++  +     P  +   HAGH+  I D   
Sbjct: 319 IEFDPNNDGILYSSGSDRRTIVWDLQEIGAEQTQDEIEDGPPEVLMIHAGHKTSINDIAV 378

Query: 449 NSSDPWTIXXXXXXXXXXXXXXTLQIWRMSDLIYR 345
           N +  W +               +QIW+ S  I R
Sbjct: 379 NPNINWLV-------ASAEEDNIVQIWKCSSNIPR 406

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>GRWD1_RAT (Q5XI13) Glutamate-rich WD repeat-containing protein 1|
          Length = 445

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS------------PGGLFFQHAGHR 474
           V+W P  + VF +S  D  +  WD   +  +++P S            P  L F H G  
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWD---LAVERDPESGETETDPGLAALPQQLLFVHQGET 414

Query: 473 DKIVDFHWNSSDP 435
           D + + HW+   P
Sbjct: 415 D-LKELHWHPQCP 426



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 25/111 (22%), Positives = 43/111 (38%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSD 438
           +QWSP + +VF S + D  + +WD      K        +    A H   +    W+  +
Sbjct: 266 LQWSPTEDTVFASCSADASIRIWDIRAAPGK------ACMLTTAAAHDGDVNVISWSRRE 319

Query: 437 PWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELETFKSHLASCT 285
           P+ +              TL++W +         +  S + TFK H+A  T
Sbjct: 320 PFLL--------SGGDDGTLKVWDLRQF------KSGSPVATFKQHVAPVT 356

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>YSK4_HUMAN (Q56UN5) SPS1/STE20-related protein kinase YSK4 (EC 2.7.11.1)|
            (Regulated in COPD, protein kinase)
          Length = 1328

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
 Frame = +2

Query: 203  DVSNGQITTTIPRDIT*FKDI---T*FKPSECSW--PSET*RSPALKEPRPLG---GRSN 358
            D+SN QI TT  RD+   +++     F PSE SW  PSE   +  +++ +       + N
Sbjct: 823  DISNNQILTTSLRDLQELEELHHQIPFIPSEDSWAVPSEKNSNKYVQQEKQNTASLSKVN 882

Query: 359  HSYAISAKFHLHRCSHHHQIHSQWSKGLMSSSGNLQSYPYDLH 487
             S  ++        S H +  + +S      S + Q+Y Y +H
Sbjct: 883  ASRILTNDLEFDSVSDHSKTLTNFSFQAKQESASSQTYQYWVH 925

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>AGRN_RAT (P25304) Agrin precursor|
          Length = 1959

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +2

Query: 287 CSWPSET*RSPALKEPRPLGGRSNHSYAISAKFHLHRCSHHHQIHSQWSKGLMSSSGNLQ 466
           C  PSE      ++  +P+ G   H+YA   + H+H C+H   ++       ++S+G+ Q
Sbjct: 448 CVCPSE-----CVESAQPVCGSDGHTYASECELHVHACTHQISLY-------VASAGHCQ 495

Query: 467 S 469
           +
Sbjct: 496 T 496

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>GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein 1 (Protein|
           A301)
          Length = 446

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS------------PGGLFFQHAGHR 474
           V+W P  + VF +S  D  +  WD   +  +++P              P  L F H G  
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWD---LAVERDPEPGETETDPGLAALPQQLLFVHQGET 415

Query: 473 DKIVDFHWNSSDP 435
           D + + HW+   P
Sbjct: 416 D-LKELHWHPQCP 427



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/111 (20%), Positives = 41/111 (36%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSD 438
           +QWSP + +VF S + D  + +WD      K        +      H   +    W+  +
Sbjct: 267 LQWSPTEDTVFASCSADASIRIWDIRAAPGK------ACMLTTATAHDGDVNVISWSRRE 320

Query: 437 PWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELETFKSHLASCT 285
           P+ +               L++W +         +  S + TFK H+A  T
Sbjct: 321 PFLL--------SGGDDGALKVWDLRQF------KSGSPVATFKQHMAPVT 357

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>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1|
          Length = 446

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 24/111 (21%), Positives = 41/111 (36%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSD 438
           +QWSP + +VF S + D  + +WD      K        +      H   +    W+  +
Sbjct: 267 LQWSPTENTVFASCSADASIRIWDIRAAPSK------ACMLTTATAHDGDVNVISWSRRE 320

Query: 437 PWTIXXXXXXXXXXXXXXTLQIWRMSDLIYRPEDEVLSELETFKSHLASCT 285
           P+ +               L+IW +         +  S + TFK H+A  T
Sbjct: 321 PFLL--------SGGDDGALKIWDLRQF------KSGSPVATFKQHVAPVT 357



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNS------------PGGLFFQHAGHR 474
           V+W P  + VF +S  D  +  WD   +  +++P +            P  L F H G  
Sbjct: 359 VEWHPQDSGVFAASGADHQITQWD---LAVERDPEAGDVEADPGLADLPQQLLFVHQGET 415

Query: 473 DKIVDFHWNSSDP 435
           + + + HW+   P
Sbjct: 416 E-LKELHWHPQCP 427

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>FRIGI_ARATH (Q9FDW0) FRIGIDA protein|
          Length = 609

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 290 SWPSET*RSPALKEPRPLGGRSNHSYAISAKFHL----HRCSHHHQIHSQWSKGLMSSSG 457
           S+P  + RSP    P P GG     YA     HL    +   H H++H Q+S  L+    
Sbjct: 503 SFPHRSRRSPEYMVPLPHGGLGRSVYAYE---HLAPNSYSPGHGHRLHRQYSPSLVHGQR 559

Query: 458 NLQSYPYDLHVERK 499
           +   Y   +H +++
Sbjct: 560 HPLQYSPPIHGQQQ 573

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>RRB1_YEAST (Q04225) Ribosome assembly protein RRB1|
          Length = 511

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP 516
           +QWS  +++VF ++  DG++ +WD     KK  P
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTR--SKKHKP 358

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>DYI3_ANTCR (Q16960) Dynein intermediate chain 3, ciliary|
          Length = 597

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -1

Query: 611 WSPDKASVFGSSAEDGFLNVWDHEKVGKKKNP 516
           WSP + +VF ++  DG L+VWD+  + K+K+P
Sbjct: 414 WSPVRPAVFFTTKMDGSLDVWDY--LFKQKDP 443

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>MUTS_METBF (Q46CE2) DNA mismatch repair protein mutS|
          Length = 900

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 203 DVSNGQITTTIPRDIT*FK----DIT*FKPSECSWPSET*RSPALKE 331
           D+S G+  TT  RD   F+    ++   +PSEC  PS    +PAL E
Sbjct: 156 DISTGEFLTTQFRDSENFEKLLSELARMRPSECILPSSLYENPALAE 202

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>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26|
          Length = 514

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
 Frame = -1

Query: 620 CVQWSPDKASVFGSSAEDGFLNVW------DHEKV 534
           CV W+P   S+  S+++DG + +W      DH+ +
Sbjct: 471 CVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQNI 505

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>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26|
          Length = 514

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
 Frame = -1

Query: 620 CVQWSPDKASVFGSSAEDGFLNVW------DHEKV 534
           CV W+P   S+  S+++DG + +W      DH+ +
Sbjct: 471 CVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQNI 505

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>L_CDVO (P24658) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2184

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +2

Query: 380  KFHLHRCSHHHQIH-------SQWSKGLMSSSGNLQSYPYDLHVERKAHQANWDFSSFQP 538
            + H HR S  +Q+        S+ SKG+     N  S+P       K ++  WD    +P
Sbjct: 1498 EIHYHRPSGKYQMGELLFSFLSRMSKGVFKILANALSHP-------KVYRRFWDSGMIEP 1550

Query: 539  SHGPT 553
             HGP+
Sbjct: 1551 VHGPS 1555

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>GAT24_ARATH (Q5HZ36) GATA transcription factor 24|
          Length = 398

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +2

Query: 374 SAKFHLHRCSHHHQIHSQWSKGLMSSSGNLQSY-PYDLHVERKAHQANWDFSSFQPSHGP 550
           S+  H H   HHHQ+ S  S    SS  +L SY P+ ++ +   H A      +  ++  
Sbjct: 29  SSSLHHHHHHHHHQVPSN-SSSSSSSISSLSSYLPFLINSQEDQHVA------YNNTYHA 81

Query: 551 THLRNHLLQSFRKQM 595
            HL  HL Q  + +M
Sbjct: 82  DHL--HLSQPLKAKM 94

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>ZN229_HUMAN (Q9UJW7) Zinc finger protein 229 (Fragment)|
          Length = 420

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 416 IHSQWSKGLMSSSGNLQSYPYDLHVERKAHQANWDFSSF 532
           I   W+K  ++  G++Q    +L  E   ++ NWD  SF
Sbjct: 184 IQGSWAKAFVNQLGDVQERCKNLDTEDTVYKCNWDDDSF 222

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>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17|
          Length = 1322

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSD 438
           V+WSP +  +  S ++DG + +WD+ +       N          GH   +    WN+  
Sbjct: 572 VKWSPLREGILCSGSDDGTVRIWDYTQDACINILN----------GHTAPVRGLMWNTEI 621

Query: 437 PWTI 426
           P+ +
Sbjct: 622 PYLL 625

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>CORO_CAEEL (Q21624) Coronin-like protein cor-1|
          Length = 605

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -1

Query: 617 VQWSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWN 447
           V WSP   +V  S +ED    VW     G  +N + P     +  GH+ ++    W+
Sbjct: 85  VAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPA---VELTGHQKRVNTIAWH 138

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>KUP_PSEAE (Q9I540) Probable potassium transport system protein kup|
          Length = 634

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/57 (22%), Positives = 29/57 (50%)
 Frame = -3

Query: 288 HSEGLNYVISLNYVISLGIVVVICPFETSVMFSDARTT*TCTLKVLVSLFNLLYAWR 118
           H +G  Y+  +N+ + +G+V+++  FE+S   + A         ++ +L   +  WR
Sbjct: 344 HEQGQIYIGGVNWALMVGVVLLVLGFESSASLAAAYGVAVTGTMLITTLLMGVVIWR 400

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>AGRN_HUMAN (O00468) Agrin precursor|
          Length = 2045

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 287 CSWPSET*RSPALKEPRPLGGRSNHSYAISAKFHLHRCSHHHQIH 421
           C  PSE      +   +P+ G   H+Y      H+H C+H   +H
Sbjct: 553 CVCPSE-----CVALAQPVCGSDGHTYPSECMLHVHACTHQISLH 592

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>NUP43_MOUSE (P59235) Nucleoporin Nup43|
          Length = 380

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 620 CVQWSPDKASVFGSSAEDGFLNVWD 546
           CV   PD+  V  +  +DG L++WD
Sbjct: 222 CVDRHPDQQHVVATGGQDGMLSIWD 246

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>GEMI5_MOUSE (Q8BX17) Gem-associated protein 5 (Gemin5)|
          Length = 1502

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = -1

Query: 611 WSPDKASVFGSSAEDGFLNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSDP 435
           WSP       S+  DG   VWD      ++ P       F   GHR +++   W+  DP
Sbjct: 647 WSPHHDGRLVSACYDGTAQVWD----ALREEP------LFNFRGHRGRLLCVAWSPVDP 695

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>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2|
          Length = 356

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 623 LCVQWSPDKASVFGSSAEDGFLNVWD 546
           LC+ WS DK  +  SS++DG + VWD
Sbjct: 72  LCMDWSLDKRHIV-SSSQDGKVIVWD 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,126,057
Number of Sequences: 219361
Number of extensions: 1828811
Number of successful extensions: 5043
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 4643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4938
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result