| Clone Name | rbags10a19 |
|---|---|
| Clone Library Name | barley_pub |
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +3 Query: 171 INIISLGLIPLGSPRDLRSLLTLQYRPPILHHYCRRERRSRMLAHGRQATMV 326 +++++L L P G PR L Q P+L YC RE + A QA +V Sbjct: 196 LDVLTLELGP-GGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEAAQAGLV 246
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +3 Query: 171 INIISLGLIPLGSPRDLRSLLTLQYRPPILHHYCRRERRSRMLAHGRQATMV 326 +++++L L P G PR L Q P+L YC RE + A QA +V Sbjct: 196 LDVLTLELGP-GGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEAAQAGLV 246
>FZD10_HUMAN (Q9ULW2) Frizzled 10 precursor (Frizzled-10) (Fz-10) (hFz10) (FzE7)| Length = 581 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 406 PLFPPPRPAAVDEEPPKFSCRAKGGDEEPPKF 501 PLF P RP + E P K +GG + P KF Sbjct: 167 PLFRPQRPHSAQEHPLKDGGPGRGGCDNPGKF 198
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 207 SPRDLRSLLTLQYRPPILHHYCRRERRSRMLAH 305 S +L+ L L YR P+ HHY ++E R R H Sbjct: 82 SIEELQELDLLDYRHPMYHHYQQQELRQRYHEH 114
>PPNK_BIFLO (Q8G5G8) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 342 Score = 29.6 bits (65), Expect = 9.0 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +3 Query: 333 CRGRRVDALPNATACTCRRPTEEHAIVSSSATGCRRRGAAEVQLPGQGWRRGA 491 C GRR ALP T R + + S R ++ LP GWR A Sbjct: 239 CDGRRQRALPQGTRVMVRESRDTLRLARLSGVPFTNRLVSKFDLPVVGWREHA 291
>SYF2_DEBHA (Q6BVE0) Pre-mRNA-splicing factor SYF2| Length = 231 Score = 29.6 bits (65), Expect = 9.0 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Frame = -2 Query: 597 KKDERPKLQESTKEYLFFFFPLQNG*FHQKATELRRLLVATLGPATELRRL--LVDGSRS 424 KK E KL K+ LF + Q K+ E +++ L E +L + G Sbjct: 41 KKQESEKLN---KQELFQDYKQQK----LKSIEYKKIEQKKLNAELEQEKLDSIEKGEDF 93 Query: 423 RRRKQWRVLRWVVDRCRRWRSATRQLG 343 R++ W W ++ C +W T+Q G Sbjct: 94 ERKQNWD---WTIEDCEKWEKKTKQKG 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,205,385 Number of Sequences: 219361 Number of extensions: 1835208 Number of successful extensions: 5582 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5575 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)