Clone Information

BLAST Search Result

Clone Name	rbags10a10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (At...	162	1e-39
2	VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (At...	145	8e-35
3	VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (At...	144	2e-34
4	VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protei...	144	2e-34
5	VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (At...	142	1e-33
6	VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (At...	124	2e-28
7	VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (At...	102	1e-21
8	VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (At...	78	2e-14
9	VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (At...	76	8e-14
10	VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (At...	71	3e-12
11	VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (At...	65	2e-10
12	SYB_APLCA (P35589) Synaptobrevin	64	3e-10
13	VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)	63	9e-10
14	VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)	62	2e-09
15	SYB1_SCHPO (Q92356) Synaptobrevin homolog 1	62	2e-09
16	SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1	60	8e-09
17	SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insen...	60	8e-09
18	SNC2_YEAST (P33328) Synaptobrevin homolog 2	59	1e-08
19	SYB_LOLPE (P47194) Synaptobrevin	56	8e-08
20	VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)	56	1e-07
21	VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP...	56	1e-07
22	SYB_DROME (P18489) Synaptobrevin	55	2e-07
23	VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8...	54	3e-07
24	VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP...	54	4e-07
25	SYBL_SCHMA (Q27236) Synaptobrevin-like protein	54	4e-07
26	VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP...	54	4e-07
27	SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated in...	54	4e-07
28	SNC1_YEAST (P31109) Synaptobrevin homolog 1	54	4e-07
29	VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2...	54	5e-07
30	VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP...	54	5e-07
31	VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP...	54	5e-07
32	VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP...	54	5e-07
33	VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP...	54	5e-07
34	VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP...	52	1e-06
35	VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1...	52	2e-06
36	VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3...	52	2e-06
37	VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP...	52	2e-06
38	VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP...	52	2e-06
39	NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synapt...	51	3e-06
40	VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP...	49	1e-05
41	VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP...	48	2e-05
42	SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22	39	0.014
43	SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 v...	38	0.024
44	SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 v...	38	0.024
45	SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 v...	38	0.024
46	VAMPL_ARATH (Q84WF5) Probable VAMP-like protein At1g33485	38	0.024
47	SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22	38	0.031
48	SEC22_CANGA (Q6FWT0) Protein transport protein SEC22	33	1.00
49	MYO4_CAEEL (P02566) Myosin-4 (Myosin heavy chain B) (MHC B) (Unc...	32	1.7
50	SEC22_KLULA (Q6CJA0) Protein transport protein SEC22	32	1.7
51	STXB5_RAT (Q9WU70) Syntaxin-binding protein 5 (Tomosyn-1) (Letha...	32	1.7
52	STXB5_MOUSE (Q8K400) Syntaxin-binding protein 5 (Tomosyn-1) (Let...	32	1.7
53	ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-cont...	31	2.9
54	DMD_PIG (Q5GN48) Dystrophin	31	3.8
55	SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)	31	3.8
56	SRW1_SCHPO (O13286) WD-repeat-containing protein srw1 (Suppresso...	30	4.9
57	DMD_HUMAN (P11532) Dystrophin	30	4.9

>VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (AtVAMP727)|
          Length = 240

 Score =  162 bits (409), Expect = 1e-39
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC++HPEE++KLSK+K+ ++EVKGIMMDNIEK+LDRGEKIELLV KTE LQ QAD
Sbjct: 134 KEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQAD 193

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
           SF R GR+LRRKMWLQ+L+ KLMV G +   ILI+W++ C GFKC
Sbjct: 194 SFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238

to top

>VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtVAMP721)|
           (v-SNARE synaptobrevin 7B) (AtVAMP7B)
          Length = 219

 Score =  145 bits (367), Expect = 8e-35
 Identities = 69/105 (65%), Positives = 87/105 (82%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC++HP+EI+KL+KVK+ +SEVKG+MM+NIEK+LDRGEKIELLV KTE L+SQA 
Sbjct: 115 KEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQ 174

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
            F   G ++RRKMWLQN++ KL+V   I  LILI+ L VC GFKC
Sbjct: 175 DFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219

to top

>VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtVAMP725)|
          Length = 285

 Score =  144 bits (364), Expect = 2e-34
 Identities = 67/105 (63%), Positives = 87/105 (82%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC++HP+EI+KL+KVK+ ++EVKG+MM+NIEK+LDRGEKIELLV KTE L+SQA 
Sbjct: 180 KEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQ 239

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
            F   G ++RRKMW +N++ KL+V G I  LILI+ L VC GFKC
Sbjct: 240 DFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284

to top

>VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein 726|
           (AtVAMP726)
          Length = 220

 Score =  144 bits (363), Expect = 2e-34
 Identities = 67/105 (63%), Positives = 86/105 (81%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC +HPEEI+KLSKVK+ ++EVKG+MM+NIEK+LDRGEKIELLV KTE L+SQA 
Sbjct: 115 KEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQ 174

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
            F   G +++RK+W +N++ KL+V G I  LILI+ L VC GFKC
Sbjct: 175 DFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219

to top

>VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtVAMP722)|
           (Synaptobrevin-related protein 1)
          Length = 221

 Score =  142 bits (357), Expect = 1e-33
 Identities = 66/105 (62%), Positives = 85/105 (80%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC++HP+EI+KL+KVK+ +SEVKG+MM+NIEK+LDRGEKIELLV KTE L+SQA 
Sbjct: 115 KEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQ 174

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
            F   G ++RRKMW QN++ KL+V   I  LILI+ L +C GF C
Sbjct: 175 DFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNC 219

to top

>VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (AtVAMP724)|
           (SYBL1-like protein)
          Length = 222

 Score =  124 bits (312), Expect = 2e-28
 Identities = 54/105 (51%), Positives = 78/105 (74%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HM Y ++H EEI KL KVK+ +SEVK IM++NI+K +DRGE + +L  KTE L+SQA 
Sbjct: 116 KEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQ 175

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
            + + G ++RRK+W QN++ KL+V G +  L+LI+W+ VC GF C
Sbjct: 176 EYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220

to top

>VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtVAMP723)|
          Length = 217

 Score =  102 bits (253), Expect = 1e-21
 Identities = 52/105 (49%), Positives = 74/105 (70%)
 Frame = -3

Query: 662 KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQAD 483
           K+HMQYC++HP+EI+ L+K K+ +SEVK +MM+NIEK+L RG   E+L G +E   SQ  
Sbjct: 115 KEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML-GSSE---SQPQ 170

Query: 482 SFHRHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
           +F+    +++RK W QN++ KL+V   I  LILI+ L VC GF C
Sbjct: 171 AFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNC 215

to top

>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)|
          Length = 221

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 35/99 (35%), Positives = 67/99 (67%)
 Frame = -3

Query: 653 MQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFH 474
           M++  ++P  ++ L++V+  +SE++ +M++NIEKI++RG++IELLV KT T+Q  +  F 
Sbjct: 116 MEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFR 174

Query: 473 RHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRG 357
           +  + LRR +W++N +  +++   I FL+ I+    C G
Sbjct: 175 KQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGG 213

to top

>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)|
          Length = 221

 Score = 76.3 bits (186), Expect = 8e-14
 Identities = 34/99 (34%), Positives = 62/99 (62%)
 Frame = -3

Query: 653 MQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFH 474
           M++  N P   +++S++K  +S+V+ +M++NI+K+LDRGE++ELLV KTE +Q     F 
Sbjct: 116 MEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFR 174

Query: 473 RHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRG 357
           +  R  R  MW +N++  + +   ++ ++ I    VC G
Sbjct: 175 KQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213

to top

>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)|
           (v-SNARE synaptobrevin 7C) (AtVAMP7C)
          Length = 219

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 33/102 (32%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -3

Query: 653 MQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFH 474
           + Y  N P   ++++++K  +++V+G+M++NI+K+LDRGE++ELLV KT  +Q     F 
Sbjct: 115 IDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFR 173

Query: 473 RHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMV---CRG 357
           +  R  R  +W +N +  +++   I  L++I+++ V   C G
Sbjct: 174 KQARRFRSNVWWRNCKLTVLL---ILLLLVIIYIAVAFLCHG 212

to top

>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)|
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/102 (30%), Positives = 59/102 (57%)
 Frame = -3

Query: 653 MQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFH 474
           ++Y  N P   + +S++K  +++V+ +M++NI+ ILDRGE++ELLV KT  +Q     F 
Sbjct: 115 IEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFR 173

Query: 473 RHGRELRRKMWLQNLRFKLMVGGGISFLILILWLMVCRGFKC 348
           +  R     +W +N +  L++      L+L++ + +   F C
Sbjct: 174 KQTRRFNNTVWWRNCKLTLLL-----ILVLLVIIYIGVAFAC 210

to top

>SYB_APLCA (P35589) Synaptobrevin|
          Length = 180

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = -3

Query: 629 EEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRR 450
           E+  +L + ++ + EV  IM  N+EK+LDR +KI  L  + E LQ+ A  F     +L+R
Sbjct: 17  EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKR 76

Query: 449 KMWLQNLRFKLMVGG--GISFLILILWLM 369
           K W +N +  L++G   G+  +I+I+W++
Sbjct: 77  KYWWKNCKMMLILGAIIGVIVIIIIVWVV 105

to top

>VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 26/90 (28%), Positives = 57/90 (63%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +K+  V++ + EV  +M +NI K+++RGE+++ L  K+E+L   A +F    ++LRR+MW
Sbjct: 51  DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRGFK 351
            +  + K ++    + L+L++ +++   F+
Sbjct: 111 WRGCKIKAIMALAAAILLLMIIILIVVKFR 140

to top

>VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 25/90 (27%), Positives = 57/90 (63%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +K+  V++ + EV  +M +NI K+++RGE+++ L  K+E+L   A +F    ++LRR+MW
Sbjct: 51  DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRGFK 351
            +  + K ++    + L+L++ +++   ++
Sbjct: 111 WRGCKIKAIMALVAAILLLVIIILIVMKYR 140

to top

>SYB1_SCHPO (Q92356) Synaptobrevin homolog 1|
          Length = 121

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 27/88 (30%), Positives = 52/88 (59%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           K + ++  + +  GIM +NI K+ +RGE+++ L  KT+ L   A  F R    +R+KMW 
Sbjct: 31  KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWW 90

Query: 437 QNLRFKLMVGGGISFLILILWLMVCRGF 354
           +++R +L +  GI  L++++ + +   F
Sbjct: 91  KDMRMRLCIIIGIIILLVVIIVPIATKF 118

to top

>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1|
          Length = 219

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 30/90 (33%), Positives = 54/90 (60%)
 Frame = -3

Query: 623 INKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKM 444
           ++K+ + ++ + E+KGIM+ NI+ +  RGE++ELL+ KTE L   + +F    R L R M
Sbjct: 122 LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAM 181

Query: 443 WLQNLRFKLMVGGGISFLILILWLMVCRGF 354
            ++NL+  +++       I I+   +C GF
Sbjct: 182 CMKNLKLTIIIIIVSIVFIYIIVSPLCGGF 211

to top

>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)|
           (Ti-VAMP) (Ti-VAMP/VAMP7)
          Length = 219

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 30/90 (33%), Positives = 54/90 (60%)
 Frame = -3

Query: 623 INKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKM 444
           ++K+ + ++ + E+KGIM+ NI+ +  RGE++ELL+ KTE L   + +F    R L R M
Sbjct: 122 LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAM 181

Query: 443 WLQNLRFKLMVGGGISFLILILWLMVCRGF 354
            ++NL+  +++       I I+   +C GF
Sbjct: 182 CMKNLKLTIIIIIVSIVFIYIIVSPLCGGF 211

to top

>SNC2_YEAST (P33328) Synaptobrevin homolog 2|
          Length = 115

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 27/90 (30%), Positives = 52/90 (57%)
 Frame = -3

Query: 635 HPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGREL 456
           +P   NK + ++  + +  GIM DNI K+ +RGE++  +  K + L   A  F R    +
Sbjct: 21  NPNSQNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRV 80

Query: 455 RRKMWLQNLRFKLMVGGGISFLILILWLMV 366
           R++MW ++L+ ++ +     FL++I+ L+V
Sbjct: 81  RKQMWWKDLKMRMCL-----FLVVIILLVV 105

to top

>SYB_LOLPE (P47194) Synaptobrevin|
          Length = 125

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 25/87 (28%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -3

Query: 629 EEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRR 450
           ++  +L + ++ + EV  IM  N++K+L+R  KI  L  + + LQ+ A  F     +L+R
Sbjct: 36  QQSKRLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKR 95

Query: 449 KMWLQNLRFKLMVGGGISFL--ILILW 375
           K W +N +  +++GG ++ +  ++I+W
Sbjct: 96  KFWWKNCKMMIILGGIVAVIVTVIIVW 122

to top

>VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)|
          Length = 100

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 27/89 (30%), Positives = 52/89 (58%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +++  ++S +  VK IM  N+E+IL RGE +E L  KTE L++ ++ F    +++ RK W
Sbjct: 11  DRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFW 70

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRGF 354
            +N++  +++   +  +IL + L     F
Sbjct: 71  WKNVKMIVLICVIVFIIILFIVLFATGAF 99

to top

>VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 27/89 (30%), Positives = 52/89 (58%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +++  ++S +  VK IM  N+E+IL RGE +E L  KTE L++ ++ F    +++ RK W
Sbjct: 11  DRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFW 70

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRGF 354
            +N++  +++   +  +IL + L     F
Sbjct: 71  WKNVKMIVLICVIVFIIILFIVLFATGAF 99

to top

>SYB_DROME (P18489) Synaptobrevin|
          Length = 152

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 27/83 (32%), Positives = 52/83 (62%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           KL + ++ + EV GIM  N+EK+L+R +K+  L  + + L+  A  F +   +L+RK W 
Sbjct: 47  KLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWW 106

Query: 437 QNLRFKLMVGGGISFLILILWLM 369
            N++  +++ G I+ ++LI+ L+
Sbjct: 107 ANMKMMIIL-GVIAVVLLIIVLV 128

to top

>VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 28/88 (31%), Positives = 54/88 (61%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +++  ++S +  VK IM  N+E+IL RGE ++ L  KTE L++ ++ F    +++ RK W
Sbjct: 10  DRVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 69

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRG 357
            +N++  +++   I  +ILIL ++   G
Sbjct: 70  WKNVKM-IVIICVIVLIILILIILFATG 96

to top

>VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (Edb)
          Length = 101

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 27/88 (30%), Positives = 54/88 (61%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           +++  ++S +  VK IM  N+E+IL RGE ++ L  KTE L++ ++ F    +++ RK W
Sbjct: 11  DRVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 70

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCRG 357
            +N++  +++   I  +I+IL ++   G
Sbjct: 71  WKNVKM-IVIICVIVLIIVILIILFATG 97

to top

>SYBL_SCHMA (Q27236) Synaptobrevin-like protein|
          Length = 131

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -3

Query: 632 PEEINK-LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGREL 456
           P + NK L + ++ ++EV  IM  N++K+L+R + +  L G+ + LQ+ A  F     +L
Sbjct: 12  PIKTNKRLQQTQAQVNEVVDIMRVNVDKVLERDKNLSELDGRADALQAGASQFEASAGKL 71

Query: 455 RRKMWLQNLRFKLMVGGGISFLILILWLMV 366
           +RK W +N +   ++G  +  LI++L + V
Sbjct: 72  KRKFWWKNCKMLAVLGVLVVILIIVLIVWV 101

to top

>VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 22/80 (27%), Positives = 48/80 (60%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 33  RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +N +  +M+G   + +++++
Sbjct: 93  KNCKMMIMLGAICAIIVVVI 112

to top

>SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated integral|
           membrane protein) (VAMP-1)
          Length = 120

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 22/80 (27%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  I+  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 35  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 94

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +N +  +M+GG  + +++++
Sbjct: 95  KNCKMMIMLGGIGAIIVIVI 114

to top

>SNC1_YEAST (P31109) Synaptobrevin homolog 1|
          Length = 117

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 22/81 (27%), Positives = 48/81 (59%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           ++ +++++ + +  GIM DNI K+ +RGE++  +  K + L   A  F R    +R+ MW
Sbjct: 27  SRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKAMW 86

Query: 440 LQNLRFKLMVGGGISFLILIL 378
            ++L+ K+ +   I  L++++
Sbjct: 87  YKDLKMKMCLALVIIILLVVI 107

to top

>VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/80 (28%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 30  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 89

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +NL+  +++G   + +++I+
Sbjct: 90  KNLKMMIILGVICAIILIII 109

to top

>VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/80 (28%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 30  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 89

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +NL+  +++G   + +++I+
Sbjct: 90  KNLKMMIILGVICAIILIII 109

to top

>VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/80 (28%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 30  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 89

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +NL+  +++G   + +++I+
Sbjct: 90  KNLKMMIILGVICAIILIII 109

to top

>VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/80 (28%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 30  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 89

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +NL+  +++G   + +++I+
Sbjct: 90  KNLKMMIILGVICAIILIII 109

to top

>VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 23/80 (28%), Positives = 49/80 (61%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 30  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 89

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +NL+  +++G   + +++I+
Sbjct: 90  KNLKMMIILGVICAIILIII 109

to top

>VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 21/80 (26%), Positives = 48/80 (60%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  I+  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 33  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +N +  +M+G   + +++++
Sbjct: 93  KNCKMMIMLGAICAIIVVVI 112

to top

>VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 21/84 (25%), Positives = 50/84 (59%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  I+  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 33  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWW 92

Query: 437 QNLRFKLMVGGGISFLILILWLMV 366
           +N +  +M+G   + +++++ + +
Sbjct: 93  KNCKMMIMLGAICAIIVVVIVIYI 116

to top

>VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 50/84 (59%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 18  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 77

Query: 437 QNLRFKLMVGGGISFLILILWLMV 366
           +N +   M   GIS L++I+ +++
Sbjct: 78  KNCK---MWAIGISVLVIIVIIII 98

to top

>VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 50/84 (59%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 18  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 77

Query: 437 QNLRFKLMVGGGISFLILILWLMV 366
           +N +   M   GIS L++I+ +++
Sbjct: 78  KNCK---MWAIGISVLVIIVIIII 98

to top

>VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2) (SYBII)
          Length = 113

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 22/80 (27%), Positives = 48/80 (60%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R  K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 28  RLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWW 87

Query: 437 QNLRFKLMVGGGISFLILIL 378
           +N++  +++G   + +++I+
Sbjct: 88  KNMKMMIIMGVICAIILIII 107

to top

>NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synaptobrevin NYV1)|
           (New v-SNARE 1)
          Length = 251

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = -3

Query: 602 KSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQN--- 432
           +  + +V  IM DNI+K L+R E++ LLV KT  L S ++ F R    ++  MW Q    
Sbjct: 170 EDQIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQKVKN 229

Query: 431 ---LRFKLMVGGGISFLILILW 375
              L F +++    +F+   LW
Sbjct: 230 ITLLTFTIILFVSAAFMFFYLW 251

to top

>VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 99

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 24/84 (28%), Positives = 49/84 (58%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + ++ + EV  IM  N++K+L+R +K+  L  + + LQ+ A  F     +L+RK W 
Sbjct: 13  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 72

Query: 437 QNLRFKLMVGGGISFLILILWLMV 366
           +N +   M   GI+ L++ + +++
Sbjct: 73  KNCK---MWAIGITVLVIFIIIII 93

to top

>VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP-5) (Myobrevin)|
          Length = 116

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = -3

Query: 617 KLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWL 438
           +L + +   +EV  IM +N  K+L+RG K+  L  +++ L   + +F++  + L +K   
Sbjct: 5   ELERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCW 64

Query: 437 QNLRFKLMVG---GGISFLILILWLMV 366
           +N+R+++ VG    G+  +ILI+ L+V
Sbjct: 65  ENIRYRICVGLVVVGVLLIILIVLLVV 91

to top

>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 22/82 (26%), Positives = 43/82 (52%)
 Frame = -3

Query: 614 LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQ 435
           L ++ S L  VK IM  NIE +L RG+ ++ +   + +L+  +  + R  +++   + L 
Sbjct: 133 LDQLNSDLLGVKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKYRRSAQKINFDLLLS 192

Query: 434 NLRFKLMVGGGISFLILILWLM 369
                 ++  G+ FL L+ WL+
Sbjct: 193 QYAPVALI--GLFFLFLVWWLV 212

to top

>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 20/81 (24%), Positives = 41/81 (50%)
 Frame = -3

Query: 614 LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQ 435
           L  + + L +V+ IM+ NIE++L RGE +  L  K   L S +  + +  + L  +    
Sbjct: 134 LGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS--- 190

Query: 434 NLRFKLMVGGGISFLILILWL 372
              +  +    + F++LI+++
Sbjct: 191 --TYAKLAAVAVFFIMLIVYV 209

to top

>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 20/81 (24%), Positives = 41/81 (50%)
 Frame = -3

Query: 614 LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQ 435
           L  + + L +V+ IM+ NIE++L RGE +  L  K   L S +  + +  + L  +    
Sbjct: 134 LGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS--- 190

Query: 434 NLRFKLMVGGGISFLILILWL 372
              +  +    + F++LI+++
Sbjct: 191 --TYAKLAAVAVFFIMLIVYV 209

to top

>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 20/81 (24%), Positives = 41/81 (50%)
 Frame = -3

Query: 614 LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQ 435
           L  + + L +V+ IM+ NIE++L RGE +  L  K   L S +  + +  + L  +    
Sbjct: 134 LGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS--- 190

Query: 434 NLRFKLMVGGGISFLILILWL 372
              +  +    + F++LI+++
Sbjct: 191 --TYAKLAAVAVFFIMLIVYV 209

to top

>VAMPL_ARATH (Q84WF5) Probable VAMP-like protein At1g33485|
          Length = 255

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 20/87 (22%), Positives = 37/87 (42%)
 Frame = -3

Query: 608 KVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQNL 429
           K + H   ++GI ++   K  DRG   E     +E+           G +   + W + +
Sbjct: 166 KGRDHAHSLRGIEIEEHRKSNDRGNVTECSNASSESATYVPRRGRSGGSQSIERKWRRQV 225

Query: 428 RFKLMVGGGISFLILILWLMVCRGFKC 348
           +  L +   I   +L +WL +C G +C
Sbjct: 226 KIVLAIDIAICLTLLGVWLAICHGIEC 252

to top

>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = -3

Query: 638 NHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRE 459
           N P   + L K+ + L +V  +M  NIE +L RG+ +E +   +  L+  +  + +  R 
Sbjct: 120 NTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARR 179

Query: 458 LR-RKMWLQNLRFKLMVGGGISFLILILW 375
           +    +W Q     ++    + FLI + W
Sbjct: 180 VNLEALWRQYGPVSII---ALLFLIFVYW 205

to top

>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22|
          Length = 215

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 19/87 (21%), Positives = 41/87 (47%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           + L ++   L  VK IM  NIE +L RG+ +E +   + +L+  +  + +  +++   + 
Sbjct: 132 DNLDQLNQELVGVKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKYRKSAQKINFDLL 191

Query: 440 LQNLRFKLMVGGGISFLILILWLMVCR 360
           +      +MV     F + + W +  R
Sbjct: 192 ISQYAPIVMVA---FFFVFLFWWVFLR 215

to top

>MYO4_CAEEL (P02566) Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated|
            protein 54)
          Length = 1966

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -3

Query: 662  KDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTE-TLQSQA 486
            +D MQ      E I KL+K K H  E+   +M++++   D+G     +  K E TL    
Sbjct: 991  QDEMQ---QQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLE 1047

Query: 485  DSFHRHGR 462
            DS  R  R
Sbjct: 1048 DSLEREKR 1055

to top

>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 18/85 (21%), Positives = 39/85 (45%)
 Frame = -3

Query: 614 LSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQ 435
           + ++   L  VK IM  NIE +L RG+ ++ +   + +L+  A  +    +++   + + 
Sbjct: 133 MDQLNQDLKGVKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKYRASAQKINFDLLIS 192

Query: 434 NLRFKLMVGGGISFLILILWLMVCR 360
                 ++     F + +LW M  R
Sbjct: 193 QYAPIAIIA---FFFVFLLWWMFLR 214

to top

>STXB5_RAT (Q9WU70) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant|
            larvae protein homolog 3)
          Length = 1152

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 605  VKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGREL----RRKMWL 438
            VK   S V G +      + +RG+K+  L  +T  + S ADSF +H  E+    + K W 
Sbjct: 1091 VKGAASGVVGELARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWY 1150

Query: 437  Q 435
            Q
Sbjct: 1151 Q 1151

to top

>STXB5_MOUSE (Q8K400) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant|
            larvae protein homolog 3)
          Length = 1152

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 605  VKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGREL----RRKMWL 438
            VK   S V G +      + +RG+K+  L  +T  + S ADSF +H  E+    + K W 
Sbjct: 1091 VKGAASGVVGELARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWY 1150

Query: 437  Q 435
            Q
Sbjct: 1151 Q 1151

to top

>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 222 CETLI-PHRPSLCSI*DHRDLEYLCKLCG--KKGTPLDYLYILKCNLIAWT 79
           C TL   +  S+C + D    +Y C+ CG  + G   D+ + LKCNL   T
Sbjct: 78  CSTLFGEYYCSICHLFDKDKRQYHCESCGICRIGPKEDFFHCLKCNLCLTT 128

to top

>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
 Frame = -3

Query: 653  MQYCINHPEEINKLSKVKSHLSEVKGIMMD-------------NIEKILDRGEKIELLVG 513
            M++C    E+I KL K+++H+  +K  M +             + E +  + ++  LLV 
Sbjct: 1033 MEHCQKLEEQIAKLRKLQNHIKTLKNWMAEVDIFLKEEWPALGDSEILRKQLKQCRLLVS 1092

Query: 512  KTETLQSQADSFHRHGRELRRK 447
              +T+Q   +S +  G++++++
Sbjct: 1093 DIQTIQPSLNSVNEGGQKIKKE 1114

to top

>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)|
          Length = 214

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/85 (20%), Positives = 42/85 (49%)
 Frame = -3

Query: 620 NKLSKVKSHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMW 441
           + L ++   L  VK IM  NIE +L RG+ ++ +   + +L+  +  + +  +++   + 
Sbjct: 131 DNLDQLNQELVGVKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKINFDLL 190

Query: 440 LQNLRFKLMVGGGISFLILILWLMV 366
           +   ++  +V     F+ L  W+ +
Sbjct: 191 IS--QYAPIVIVAFFFVFLFWWIFL 213

to top

>SRW1_SCHPO (O13286) WD-repeat-containing protein srw1 (Suppressor of rad/wee1)|
          Length = 556

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = -3

Query: 599 SHLSEVKGIMMDNIEKILDRGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFK 420
           +H  EV G+  ++ E +L  G     L+   +  +    SFH H   ++   W  + R  
Sbjct: 372 AHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGI 431

Query: 419 LMVGGGISFLILILW 375
           L  GGG +   + LW
Sbjct: 432 LASGGGTADRTIKLW 446

to top

>DMD_HUMAN (P11532) Dystrophin|
          Length = 3685

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/82 (20%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
 Frame = -3

Query: 653  MQYCINHPEEINKLSKVKSHLSEVKGIM-------------MDNIEKILDRGEKIELLVG 513
            +++C    E++NKL K+++H+  +K  M             + + E +  + ++  LLV 
Sbjct: 1037 VEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVS 1096

Query: 512  KTETLQSQADSFHRHGRELRRK 447
              +T+Q   +S +  G++++ +
Sbjct: 1097 DIQTIQPSLNSVNEGGQKIKNE 1118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,058,130
Number of Sequences: 219361
Number of extensions: 2064518
Number of successful extensions: 5364
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 5192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5362
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result