| Clone Name | rbags10a02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2439 Score = 416 bits (210), Expect = e-113 Identities = 336/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 2026 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1967 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1966 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1907 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1906 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1847 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1846 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1787 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1786 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1727 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1726 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1667 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1666 ggaagtagttcatgcttc 1649 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 2222 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 2180
>ref|XM_506213.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA Length = 2443 Score = 416 bits (210), Expect = e-113 Identities = 336/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 2030 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1971 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1970 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1911 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1910 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1851 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1850 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1791 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1790 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1731 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1730 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1671 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1670 ggaagtagttcatgcttc 1653 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 2226 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 2184
>ref|XM_506214.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA Length = 1935 Score = 416 bits (210), Expect = e-113 Identities = 336/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 1499 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1440 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1439 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1380 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1379 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1320 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1319 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1260 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1259 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1200 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1199 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1140 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1139 ggaagtagttcatgcttc 1122 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 1695 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 1653
>dbj|AK100100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E20, full insert sequence Length = 2443 Score = 416 bits (210), Expect = e-113 Identities = 336/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 2030 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1971 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1970 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1911 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1910 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1851 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1850 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1791 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1790 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1731 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1730 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1671 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1670 ggaagtagttcatgcttc 1653 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 2226 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 2184
>dbj|AK064329.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F09, full insert sequence Length = 1932 Score = 416 bits (210), Expect = e-113 Identities = 336/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 1496 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1437 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1436 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1377 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1376 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1317 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1316 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1257 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1256 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1197 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1196 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1137 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1136 ggaagtagttcatgcttc 1119 Score = 48.1 bits (24), Expect = 0.038 Identities = 52/59 (88%), Gaps = 3/59 (5%) Strand = Plus / Minus Query: 115 caggcgtcagaatcagcagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||||||||||| | |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 1706 caggcgtcagaa--atcagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 1650
>dbj|AK101244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A07, full insert sequence Length = 2439 Score = 408 bits (206), Expect = e-111 Identities = 335/378 (88%) Strand = Plus / Minus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 2026 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 1967 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 1966 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 1907 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| | || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 1906 acctgacatcgtgccggaattcgaccggccgaagcgtgttgttgaacttctcgacccaca 1847 Query: 484 tgcccatgctgacatcttccatcttgaatagccgaagtgtctgagtgtcaaattcagata 543 |||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1846 tgcccatgtttacatcttccatcttaaatagccgaagtgtctgattgtcaaattcagata 1787 Query: 544 caatgtatcgtgcaatatccgatgagatcacatagccaggcccattcgcataacttgggt 603 ||||||| ||||||||||| | ||| || ||||||||||| ||||| |||||| |||| | Sbjct: 1786 caatgtagcgtgcaatatcggctgaaattacatagccaggtccattggcataatttggat 1727 Query: 604 aagcctcttctggccattcctcataagtgacagcccacttgccagatctcagtggtctat 663 | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1726 atgcctcctctggccattcctcataagttacagcccacttgccagatcttagtggcctat 1667 Query: 664 ggtagtagttcatgcttc 681 || ||||||||||||||| Sbjct: 1666 ggaagtagttcatgcttc 1649 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 2222 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 2180
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 214 bits (108), Expect = 3e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 5161217 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 5161276 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 5161277 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 5161336 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 5161337 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 5161396 Query: 484 tgcccatgctgacatcttccatcttgaatagc 515 |||||||| | |||||||||||||| |||||| Sbjct: 5161397 tgcccatgtttacatcttccatcttaaatagc 5161428 Score = 123 bits (62), Expect = 8e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 515 ccgaagtgtctgagtgtcaaattcagatacaatgtatcgtgcaatatccgatgagatcac 574 ||||||||||||| |||||||||||||||||||||| ||||||||||| | ||| || || Sbjct: 5161509 ccgaagtgtctgattgtcaaattcagatacaatgtagcgtgcaatatcggctgaaattac 5161568 Query: 575 atagccaggcccattcgcataacttgggtaagcctcttctggccattcct 624 ||||||||| ||||| |||||| |||| || ||||| ||||||||||||| Sbjct: 5161569 atagccaggtccattggcataatttggatatgcctcctctggccattcct 5161618 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccagatctcagtggtctatggtagtagttcatgcttc 681 |||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 5162216 cctcataagttacagcccacttgccagatcttagtggcctatggaagtagttcatgcttc 5162275 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 5161021 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 5161063 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||| | ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 5184216 tgttgaactgctcaacccacaaacccatgctcacatcttccattttgaa 5184264
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 214 bits (108), Expect = 3e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 27931 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 27990 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 27991 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 28050 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 28051 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 28110 Query: 484 tgcccatgctgacatcttccatcttgaatagc 515 |||||||| | |||||||||||||| |||||| Sbjct: 28111 tgcccatgtttacatcttccatcttaaatagc 28142 Score = 123 bits (62), Expect = 8e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 515 ccgaagtgtctgagtgtcaaattcagatacaatgtatcgtgcaatatccgatgagatcac 574 ||||||||||||| |||||||||||||||||||||| ||||||||||| | ||| || || Sbjct: 28223 ccgaagtgtctgattgtcaaattcagatacaatgtagcgtgcaatatcggctgaaattac 28282 Query: 575 atagccaggcccattcgcataacttgggtaagcctcttctggccattcct 624 ||||||||| ||||| |||||| |||| || ||||| ||||||||||||| Sbjct: 28283 atagccaggtccattggcataatttggatatgcctcctctggccattcct 28332 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccagatctcagtggtctatggtagtagttcatgcttc 681 |||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 28930 cctcataagttacagcccacttgccagatcttagtggcctatggaagtagttcatgcttc 28989 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 27735 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 27777 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||| | ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 50930 tgttgaactgctcaacccacaaacccatgctcacatcttccattttgaa 50978
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 214 bits (108), Expect = 3e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 304 gtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatca 363 ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||| Sbjct: 117384 gtcatctcacgttgcagcaccgtgagcttccggactgcagttttctccagaggcagatca 117443 Query: 364 tgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtaga 423 ||||||| |||||||||||||| || |||| ||| ||||||||||| |||| |||||||| Sbjct: 117444 tgtgctgaggggactgatagtgagccgtgaagtagccgtcgaagcagccagactggtaga 117503 Query: 424 acctgacatcgtgccgatactctactggtcgacgagtgatgttgaatttctccacccaca 483 |||||||||||||||| || || || || ||| | ||| ||||||| ||||| ||||||| Sbjct: 117504 acctgacatcgtgccggtattcgaccggccgaagcgtgttgttgaacttctcgacccaca 117563 Query: 484 tgcccatgctgacatcttccatcttgaatagc 515 |||||||| | |||||||||||||| |||||| Sbjct: 117564 tgcccatgtttacatcttccatcttaaatagc 117595 Score = 123 bits (62), Expect = 8e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 515 ccgaagtgtctgagtgtcaaattcagatacaatgtatcgtgcaatatccgatgagatcac 574 ||||||||||||| |||||||||||||||||||||| ||||||||||| | ||| || || Sbjct: 117676 ccgaagtgtctgattgtcaaattcagatacaatgtagcgtgcaatatcggctgaaattac 117735 Query: 575 atagccaggcccattcgcataacttgggtaagcctcttctggccattcct 624 ||||||||| ||||| |||||| |||| || ||||| ||||||||||||| Sbjct: 117736 atagccaggtccattggcataatttggatatgcctcctctggccattcct 117785 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccagatctcagtggtctatggtagtagttcatgcttc 681 |||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 118383 cctcataagttacagcccacttgccagatcttagtggcctatggaagtagttcatgcttc 118442 Score = 46.1 bits (23), Expect = 0.15 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 131 cagcggctcgaaacgg-gccaccgaccaaaagaatgaaagaat 172 |||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct: 117188 cagcagcttgaaacggagccaccgaccaaaagaatgaacgaat 117230
>ref|XM_469993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1956 Score = 149 bits (75), Expect = 1e-32 Identities = 261/323 (80%) Strand = Plus / Minus Query: 329 gctgccggactgcaattttctccagaggcagatcatgtgctggggggactgatagtgtgc 388 ||||||| | |||||||||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 1932 gctgccgaattgcaattttctccacaggcaaatcatctgctgcggggattggtagtgtgc 1873 Query: 389 ggtgatgtaaccgtcgaagcaaccagcctggtagaacctgacatcgtgccgatactctac 448 |||| ||| || || |||||||| | |||| ||||| ||||||||||| ||||| || Sbjct: 1872 ggtgtagtagccatcaaagcaaccggactggaagaacttgacatcgtgcgaatacttcac 1813 Query: 449 tggtcgacgagtgatgttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||| |||| ||| ||||||| ||||| |||||||| ||||| || || ||||||||||| Sbjct: 1812 tggctgacgggtgctgttgaacttctcaacccacattcccatactcacgtcttccatctt 1753 Query: 509 gaatagccgaagtgtctgagtgtcaaattcagatacaatgtatcgtgcaatatccgatga 568 ||| || | || |||||| | || ||||||||||||||||| | ||||| || || || Sbjct: 1752 gaagagtcttagcgtctgattatcgaattcagatacaatgtactgggcaatgtctgaaga 1693 Query: 569 gatcacatagccaggcccattcgcataacttgggtaagcctcttctggccattcctcata 628 || || ||||| |||||||| |||||| |||||| | || ||| ||||||||||||| Sbjct: 1692 aattacgtagcctggcccattagcataaggtgggtatacttcctcttgccattcctcata 1633 Query: 629 agtgacagcccacttgccagatc 651 | |||| |||||| ||||||| Sbjct: 1632 tgatacagaccactttccagatc 1610
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 5e-23 Identities = 152/183 (83%) Strand = Plus / Plus Query: 329 gctgccggactgcaattttctccagaggcagatcatgtgctggggggactgatagtgtgc 388 ||||||| | |||||||||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 33221957 gctgccgaattgcaattttctccacaggcaaatcatctgctgcggggattggtagtgtgc 33222016 Query: 389 ggtgatgtaaccgtcgaagcaaccagcctggtagaacctgacatcgtgccgatactctac 448 |||| ||| || || |||||||| | |||| ||||| ||||||||||| ||||| || Sbjct: 33222017 ggtgtagtagccatcaaagcaaccggactggaagaacttgacatcgtgcgaatacttcac 33222076 Query: 449 tggtcgacgagtgatgttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||| |||| ||| ||||||| ||||| |||||||| ||||| || || ||||||||||| Sbjct: 33222077 tggctgacgggtgctgttgaacttctcaacccacattcccatactcacgtcttccatctt 33222136 Query: 509 gaa 511 ||| Sbjct: 33222137 gaa 33222139 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 33243293 acccacatgcccatgctcacatcttccatcttgaa 33243327 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 475 ccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||||| ||||| ||||||||||| Sbjct: 27424288 ccacccacatgcccatgctcacatcctccatcttgaa 27424324 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 555 gcaatatccgatgagatcacatagccaggcccattcgcataacttgggtaagcctcttct 614 |||||||| || || || || |||||||| ||||| ||||| |||||||| |||||||| Sbjct: 33243636 gcaatatcagaagatataacgtagccaggaccatttgcatatgttgggtaatcctcttct 33243695 Query: 615 ggccattcct 624 ||||| |||| Sbjct: 33243696 ggccactcct 33243705 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccag 648 |||||||||||||||||||||| |||| Sbjct: 33244873 cctcataagtgacagcccacttcccag 33244899 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggccaccgaccaaaagaatgaaagaatgg 174 |||||| ||||||||||||||| |||||| Sbjct: 33221809 ggccactgaccaaaagaatgaacgaatgg 33221837 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 tctcagtggtctatggtagtagtt 673 ||||||||||| |||||||||||| Sbjct: 27425370 tctcagtggtcgatggtagtagtt 27425393
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 5e-23 Identities = 152/183 (83%) Strand = Plus / Plus Query: 329 gctgccggactgcaattttctccagaggcagatcatgtgctggggggactgatagtgtgc 388 ||||||| | |||||||||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 33312467 gctgccgaattgcaattttctccacaggcaaatcatctgctgcggggattggtagtgtgc 33312526 Query: 389 ggtgatgtaaccgtcgaagcaaccagcctggtagaacctgacatcgtgccgatactctac 448 |||| ||| || || |||||||| | |||| ||||| ||||||||||| ||||| || Sbjct: 33312527 ggtgtagtagccatcaaagcaaccggactggaagaacttgacatcgtgcgaatacttcac 33312586 Query: 449 tggtcgacgagtgatgttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||| |||| ||| ||||||| ||||| |||||||| ||||| || || ||||||||||| Sbjct: 33312587 tggctgacgggtgctgttgaacttctcaacccacattcccatactcacgtcttccatctt 33312646 Query: 509 gaa 511 ||| Sbjct: 33312647 gaa 33312649 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 33333803 acccacatgcccatgctcacatcttccatcttgaa 33333837 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 475 ccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||||| ||||| ||||||||||| Sbjct: 27515611 ccacccacatgcccatgctcacatcctccatcttgaa 27515647 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 555 gcaatatccgatgagatcacatagccaggcccattcgcataacttgggtaagcctcttct 614 |||||||| || || || || |||||||| ||||| ||||| |||||||| |||||||| Sbjct: 33334146 gcaatatcagaagatataacgtagccaggaccatttgcatatgttgggtaatcctcttct 33334205 Query: 615 ggccattcct 624 ||||| |||| Sbjct: 33334206 ggccactcct 33334215 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccag 648 |||||||||||||||||||||| |||| Sbjct: 33335383 cctcataagtgacagcccacttcccag 33335409 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggccaccgaccaaaagaatgaaagaatgg 174 |||||| ||||||||||||||| |||||| Sbjct: 33312319 ggccactgaccaaaagaatgaacgaatgg 33312347 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 tctcagtggtctatggtagtagtt 673 ||||||||||| |||||||||||| Sbjct: 27516693 tctcagtggtcgatggtagtagtt 27516716
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 117 bits (59), Expect = 5e-23 Identities = 152/183 (83%) Strand = Plus / Minus Query: 329 gctgccggactgcaattttctccagaggcagatcatgtgctggggggactgatagtgtgc 388 ||||||| | |||||||||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 22598 gctgccgaattgcaattttctccacaggcaaatcatctgctgcggggattggtagtgtgc 22539 Query: 389 ggtgatgtaaccgtcgaagcaaccagcctggtagaacctgacatcgtgccgatactctac 448 |||| ||| || || |||||||| | |||| ||||| ||||||||||| ||||| || Sbjct: 22538 ggtgtagtagccatcaaagcaaccggactggaagaacttgacatcgtgcgaatacttcac 22479 Query: 449 tggtcgacgagtgatgttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||| |||| ||| ||||||| ||||| |||||||| ||||| || || ||||||||||| Sbjct: 22478 tggctgacgggtgctgttgaacttctcaacccacattcccatactcacgtcttccatctt 22419 Query: 509 gaa 511 ||| Sbjct: 22418 gaa 22416 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 1262 acccacatgcccatgctcacatcttccatcttgaa 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 555 gcaatatccgatgagatcacatagccaggcccattcgcataacttgggtaagcctcttct 614 |||||||| || || || || |||||||| ||||| ||||| |||||||| |||||||| Sbjct: 919 gcaatatcagaagatataacgtagccaggaccatttgcatatgttgggtaatcctcttct 860 Query: 615 ggccattcct 624 ||||| |||| Sbjct: 859 ggccactcct 850 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 ggccaccgaccaaaagaatgaaagaatgg 174 |||||| ||||||||||||||| |||||| Sbjct: 22746 ggccactgaccaaaagaatgaacgaatgg 22718
>gb|BT024084.1| Zea mays clone EL01N0552H05 mRNA sequence Length = 1912 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagccgaagtg 522 ||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||||| | Sbjct: 1204 tgttgaacttctccacccacatccccatgctcacatcctccatcttaaacagccgaagcg 1145 Query: 523 tctgagtgtcaaattcagatacaatgtatcgtgcaatatccgatgagatcacatagccag 582 |||| |||| ||||| || || ||||| || |||||||| ||||| || || ||||||| Sbjct: 1144 tctggttgtcgaattcggacacgatgtaccgagcaatatcggatgaaattacgtagccag 1085 Query: 583 gcccattcgcataacttgggtaagcctcttctggccattcctcataagtgacagcccact 642 | ||||| ||||| | || || |||| ||||||||||| || || || ||||||| Sbjct: 1084 gtccattatcataattcggatacagtgcttcaggccattcctcgtacgttactgcccact 1025 Query: 643 tgccagatctcagtggtctatggtagtagtt 673 |||||||||| ||||||| |||| ||||||| Sbjct: 1024 tgccagatcttagtggtcgatggaagtagtt 994 Score = 73.8 bits (37), Expect = 7e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 303 cgtcatctcacgttgcagcaatgggtgctgccggactgcaattttctccagaggcagatc 362 |||||||| ||||||||||| ||| || |||||||||| || | ||| ||||||||| Sbjct: 1364 cgtcatctgacgttgcagcaccgggcactcccggactgcagcttccgccacaggcagatc 1305 Query: 363 atgtgctggggggactgatagtgtgcggtgatgtaaccgtcgaagcaaccagcctggtag 422 |||||||| |||||||| ||||| || |||| ||| |||| | |||| || | ||||||| Sbjct: 1304 atgtgctgcggggactggtagtgcgccgtgaagtagccgttgtagcagcccgactggtag 1245 Query: 423 aacctgacatcgtgccg 439 |||| || |||||||| Sbjct: 1244 aaccgcacgtcgtgccg 1228 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 141 aaacgggccaccgaccaaaagaatgaaagaat 172 |||||||||||||||||||||||||||||||| Sbjct: 1580 aaacgggccaccgaccaaaagaatgaaagaat 1549
>ref|NM_102474.2| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G27120 mRNA, complete cds Length = 2391 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaata 513 |||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2075 gttgaacttctccacccacattcccatgctcacatcttccatcttgaata 2026
>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I, complete sequence Length = 111566 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaata 513 |||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 65385 gttgaacttctccacccacattcccatgctcacatcttccatcttgaata 65336
>dbj|AK118254.1| Arabidopsis thaliana At1g27120 mRNA for unknown protein, complete cds, clone: RAFL19-55-I21 Length = 2391 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaata 513 |||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2075 gttgaacttctccacccacattcccatgctcacatcttccatcttgaata 2026
>ref|NM_118224.2| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT4G21060 mRNA, complete cds Length = 2226 Score = 73.8 bits (37), Expect = 7e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagcc 516 |||||||| ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 2067 gttgaattgctccacccacaatcccatgctcacatcttccatcttgaatagcc 2015
>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54 Length = 198715 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagc 515 |||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 56278 gttgaattgctccacccacaatcccatgctcacatcttccatcttgaatagc 56227
>emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSA project) Length = 91570 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagc 515 |||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 83800 gttgaattgctccacccacaatcccatgctcacatcttccatcttgaatagc 83749
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 26053567 acccacatgcccatgctcacatcttccatcttgaa 26053533
>dbj|AK111213.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A12, full insert sequence Length = 2495 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 1898 acccacatgcccatgctcacatcttccatcttgaa 1864
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 25981743 acccacatgcccatgctcacatcttccatcttgaa 25981709
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 477 acccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||| ||||||||||||||||| Sbjct: 58104 acccacatgcccatgctcacatcttccatcttgaa 58138
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 475 ccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||||||||||||| ||||| ||||||||||| Sbjct: 124495 ccacccacatgcccatgctcacatcctccatcttgaa 124531 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 tctcagtggtctatggtagtagtt 673 ||||||||||| |||||||||||| Sbjct: 125577 tctcagtggtcgatggtagtagtt 125600
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 555 gcaatatccgatgagatcacatagccaggcccattcgcataacttgggtaagcctcttct 614 |||||||| || || || || |||||||| ||||| ||||| |||||||| |||||||| Sbjct: 152 gcaatatcagaagatataacgtagccaggaccatttgcatatgttgggtaatcctcttct 211 Query: 615 ggccattcct 624 ||||| |||| Sbjct: 212 ggccactcct 221 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 622 cctcataagtgacagcccacttgccag 648 |||||||||||||||||||||| |||| Sbjct: 1389 cctcataagtgacagcccacttcccag 1415
>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence Length = 144248 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccat 505 ||||||| |||| |||||||| |||||||| ||||||||||| Sbjct: 6626 gttgaatctctcaacccacattcccatgcttacatcttccat 6667
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagc 515 |||||| ||||| ||||||| |||||||| || || ||||||||||||||| Sbjct: 1742123 gttgaacttctcaacccacagccccatgcttacgtcctccatcttgaatagc 1742072
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagc 515 |||||| ||||| ||||||| |||||||| || || ||||||||||||||| Sbjct: 24484 gttgaacttctcaacccacagccccatgcttacgtcctccatcttgaatagc 24433
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Minus Query: 464 gttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagc 515 |||||| ||||| ||||||| |||||||| || || ||||||||||||||| Sbjct: 141623 gttgaacttctcaacccacagccccatgcttacgtcctccatcttgaatagc 141572
>gb|AY107972.1| Zea mays PCO104323 mRNA sequence Length = 680 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 465 ttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||||| ||||| ||||| | ||||||||| |||||||||||||| Sbjct: 117 ttgaacttctcgacccataggcccatgcttacatcttccatctt 74
>ref|NM_106138.2| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G74800 mRNA, complete cds Length = 2391 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 607 cctcttctggccattcctcataagtgacagccca 640 |||| ||||||||||||||||| ||||| ||||| Sbjct: 1833 cctcctctggccattcctcatatgtgactgccca 1800
>ref|XM_476980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.60 Identities = 46/54 (85%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagcc 516 ||||||| | ||| ||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 1837 tgttgaactgctcaacccacaaacccatgctcacatcttccattttgaagagcc 1784
>gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete sequence Length = 113939 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 aagaaaaatttgacgggactaaaaca 110 ||||||||||||| |||||||||||| Sbjct: 47709 aagaaaaatttgaagggactaaaaca 47684
>gb|AY090451.1| Arabidopsis thaliana At1g74800/F25A4_38 mRNA, complete cds Length = 2391 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 607 cctcttctggccattcctcataagtgacagccca 640 |||| ||||||||||||||||| ||||| ||||| Sbjct: 1833 cctcctctggccattcctcatatgtgactgccca 1800
>dbj|AK120963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039P07, full insert sequence Length = 2736 Score = 44.1 bits (22), Expect = 0.60 Identities = 46/54 (85%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaatagcc 516 ||||||| | ||| ||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 2038 tgttgaactgctcaacccacaaacccatgctcacatcttccattttgaagagcc 1985
>ref|NM_125657.3| Arabidopsis thaliana galactosyltransferase/ transferase, transferring hexosyl groups AT5G62620 mRNA, complete cds Length = 2589 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||| || |||||||| |||| ||| ||||||||||| ||||| Sbjct: 2270 tgttgaattgttctacccacattcccacgcttacatcttccattttgaa 2222
>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four novel genes, an eukaryotic translation elongation factor 2 (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene, the Eif4enif1 gene for eukaryotic translation initiation factor 4E nuclear import factor 1, the Drg1 gene for developmentally regulated GTP binding protein 1, the Zfp278 gene for zinc finger protein 278, the 3' end of the Limk2 gene LIM motif-containing protein kinase 2 and five CpG islands, complete sequence Length = 214546 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 599 tgggtaagcctcttctggccattcc 623 ||||||||||||||||| ||||||| Sbjct: 135211 tgggtaagcctcttctgtccattcc 135187
>emb|BX831498.1|CNS0A1N1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2581 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||| || |||||||| |||| ||| ||||||||||| ||||| Sbjct: 2270 tgttgaattgttctacccacattcccacgcttacatcttccattttgaa 2222
>dbj|AB020751.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG21 Length = 55151 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 463 tgttgaatttctccacccacatgcccatgctgacatcttccatcttgaa 511 ||||||||| || |||||||| |||| ||| ||||||||||| ||||| Sbjct: 9390 tgttgaattgttctacccacattcccacgcttacatcttccattttgaa 9342
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tatgtcaagaaaaatttgac 98 |||||||||||||||||||| Sbjct: 198453 tatgtcaagaaaaatttgac 198434
>gb|AC155235.2| Mus musculus BAC clone RP24-406H23 from chromosome 12, complete sequence Length = 158341 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 tgaatttctccacccacatg 485 |||||||||||||||||||| Sbjct: 146708 tgaatttctccacccacatg 146689
>ref|NM_195202.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNAb0022I16.16), mRNA Length = 4110 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ggcagatcatgtgctggggg 374 |||||||||||||||||||| Sbjct: 567 ggcagatcatgtgctggggg 586
>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence Length = 171125 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tatgtcaagaaaaatttgac 98 |||||||||||||||||||| Sbjct: 124759 tatgtcaagaaaaatttgac 124778
>ref|NM_178640.1| Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 (B3galnt2), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1471 atgcccatgctgacatcttc 1452
>gb|AC110249.10| Mus musculus chromosome 14, clone RP23-257O8, complete sequence Length = 204244 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 ctcttctggccattcctcat 627 |||||||||||||||||||| Sbjct: 44694 ctcttctggccattcctcat 44675
>emb|CT009546.4| Mouse DNA sequence from clone RP23-111H19 on chromosome 13, complete sequence Length = 207769 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 158122 atgcccatgctgacatcttc 158103
>emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15 on chromosome 3, complete sequence Length = 112155 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atcttgaatagccgaagtgt 523 |||||||||||||||||||| Sbjct: 94909 atcttgaatagccgaagtgt 94928
>gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome 14, complete sequence Length = 204011 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 ctcttctggccattcctcat 627 |||||||||||||||||||| Sbjct: 15430 ctcttctggccattcctcat 15449
>emb|BX510922.8| Zebrafish DNA sequence from clone DKEY-50I6 in linkage group 21, complete sequence Length = 87532 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agcacctgaaagctcctatg 82 |||||||||||||||||||| Sbjct: 79005 agcacctgaaagctcctatg 79024
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ggcagatcatgtgctggggg 374 |||||||||||||||||||| Sbjct: 107967 ggcagatcatgtgctggggg 107986
>gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, complete sequence Length = 201251 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 gcccacttgccagatctcag 655 |||||||||||||||||||| Sbjct: 29724 gcccacttgccagatctcag 29743
>dbj|AK134868.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430411M06 product:similar to Hypothetical glycosyltransferase family 31 containing protein [Mus musculus], full insert sequence Length = 1877 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1234 atgcccatgctgacatcttc 1215
>gb|AC022426.5| Homo sapiens chromosome 5 clone CTD-2315O11, complete sequence Length = 110833 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 636 gcccacttgccagatctcag 655 |||||||||||||||||||| Sbjct: 68549 gcccacttgccagatctcag 68530
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcagatcatgtgctggggg 374 |||||||||||||||||||| Sbjct: 131811 ggcagatcatgtgctggggg 131792
>dbj|AK144880.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730046L01 product:Hypothetical glycosyltransferase family 31 containing protein homolog [Mus musculus], full insert sequence Length = 3515 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1303 atgcccatgctgacatcttc 1284
>dbj|AK151677.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830033H23 product:Hypothetical glycosyltransferase family 31 containing protein, full insert sequence Length = 2440 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1521 atgcccatgctgacatcttc 1502
>dbj|AK167635.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530025M01 product:Hypothetical glycosyltransferase family 31 containing protein, full insert sequence Length = 2110 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1472 atgcccatgctgacatcttc 1453
>dbj|AK153362.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830149D05 product:Hypothetical glycosyltransferase family 31 containing protein, full insert sequence Length = 2440 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1521 atgcccatgctgacatcttc 1502
>dbj|AK084275.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230016N13 product:hypothetical Glycosyltransferase family 31 containing protein, full insert sequence Length = 3681 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1471 atgcccatgctgacatcttc 1452
>dbj|AK035259.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530006I10 product:hypothetical Glycosyltransferase family 31 containing protein, full insert sequence Length = 2399 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1472 atgcccatgctgacatcttc 1453
>dbj|AK085691.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730017A10 product:similar to HYPOTHETICAL 41.7 KDA PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 3685 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1474 atgcccatgctgacatcttc 1455
>dbj|AK041022.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530062K18 product:hypothetical Glycosyltransferase family 31 containing protein, full insert sequence Length = 2792 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1467 atgcccatgctgacatcttc 1448
>emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, complete sequence Length = 112155 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atcttgaatagccgaagtgt 523 |||||||||||||||||||| Sbjct: 94909 atcttgaatagccgaagtgt 94928
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ggcagatcatgtgctggggg 374 |||||||||||||||||||| Sbjct: 5411837 ggcagatcatgtgctggggg 5411856
>gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome 7, complete sequence Length = 212264 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 118336 atgcccatgctgacatcttc 118317
>gb|BC085110.1| Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2, mRNA (cDNA clone MGC:103263 IMAGE:30735904), complete cds Length = 3708 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1480 atgcccatgctgacatcttc 1461
>dbj|AB116655.1| Mus musculus beta3GalNAcT2 mRNA for beta1,3-N-acetylgalactosaminyltransferase, complete cds Length = 1515 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 1340 atgcccatgctgacatcttc 1321
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 465 ttgaatttctccacccacatgcccatgctgacatcttccatctt 508 ||||||||||| ||||| | ||||| || |||||||||||||| Sbjct: 171174 ttgaatttctcaacccatagacccatacttacatcttccatctt 171131
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 gccagatctcagtggtctat 663 |||||||||||||||||||| Sbjct: 3967000 gccagatctcagtggtctat 3967019
>emb|CT573027.7| M.truncatula DNA sequence from clone MTH2-40D16 on chromosome 3, complete sequence Length = 58256 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 atcttgaatagccgaagtgt 523 |||||||||||||||||||| Sbjct: 18595 atcttgaatagccgaagtgt 18576
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ggcagatcatgtgctggggg 374 |||||||||||||||||||| Sbjct: 5412624 ggcagatcatgtgctggggg 5412643
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence Length = 169780 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 tgaatttctccacccacatg 485 |||||||||||||||||||| Sbjct: 56674 tgaatttctccacccacatg 56655
>gb|AC147614.4| Mus musculus BAC clone RP23-399A18 from 7, complete sequence Length = 193777 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 atgcccatgctgacatcttc 502 |||||||||||||||||||| Sbjct: 156315 atgcccatgctgacatcttc 156334 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,416,006 Number of Sequences: 3902068 Number of extensions: 5416006 Number of successful extensions: 100510 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100077 Number of HSP's gapped (non-prelim): 432 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)