>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 22/44 (50%), Positives = 23/44 (52%)
 Frame = -1

Query: 625 KRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRSPSNKQT 494
           K CGFVQY +R SAE               VRLSWGRS   KQT
Sbjct: 348 KCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA--KQT 389

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
 Frame = -1

Query: 625 KRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRSPS-------NKQTQPQEAT 476
           K CGFVQ+ NR SAE               +RLSWGR+ +       N Q+Q  + T
Sbjct: 338 KGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQNPIAAPALNYQSQVSQTT 394

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 625 KRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGR-SPSNKQT 494
           K CGFV++  R  AE               +RLSWGR S SN +T
Sbjct: 395 KNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSNAKT 439

>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 625 KRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRS 512
           K CGFVQY+ + +AE              ++RL+WG +
Sbjct: 332 KGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,756,627
Number of Sequences: 219361
Number of extensions: 1382307
Number of successful extensions: 3045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)