>GLDA_CITFR (P45511) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH)|
          Length = 365

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +2

Query: 329 LHDGLRLGVECLYLLGALQKQFETLHRLLFSLSQVQELEFFIRFLEKLGI 478
           +H+G  +  EC +L    +  F TL +L+   S ++E+E  + F +K+G+
Sbjct: 256 IHNGFTILEECHHLYHGEKVAFGTLAQLVLQNSPMEEIETVLNFCQKVGL 305

>ENGA_LEPIN (Q8F6K1) GTP-binding protein engA|
          Length = 489

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = -2

Query: 505 MAGGIKEGINAKFFQEADEKLKLLDLAQTEK--KPVKGLELFLESTKEVKALDSKPKTIV 332
           +AG  ++ I+    +  D +L L D A   K  K  + LE F    + +KA++S    I 
Sbjct: 257 VAGTTRDSIDT-LLEFGDRRLLLTDTAGIRKQSKTAEALE-FYSYQRTIKAIESSDLVIH 314

Query: 331 QNDAKKPTKTFDVPIKSAAVHRSNRFLI 248
             DAKK    FD  I S    +   FL+
Sbjct: 315 LLDAKKGFGDFDKKITSLLQEKGKPFLL 342

>ENGA_LEPIC (Q72PQ1) GTP-binding protein engA|
          Length = 489

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = -2

Query: 505 MAGGIKEGINAKFFQEADEKLKLLDLAQTEK--KPVKGLELFLESTKEVKALDSKPKTIV 332
           +AG  ++ I+    +  D +L L D A   K  K  + LE F    + +KA++S    I 
Sbjct: 257 VAGTTRDSIDT-LLEFGDRRLLLTDTAGIRKQSKTAEALE-FYSYQRTIKAIESSDLVIH 314

Query: 331 QNDAKKPTKTFDVPIKSAAVHRSNRFLI 248
             DAKK    FD  I S    +   FL+
Sbjct: 315 LLDAKKGFGDFDKKITSLLQEKGKPFLL 342

>EF2_METMA (Q8PUR7) Elongation factor 2 (EF-2)|
          Length = 730

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -2

Query: 385 LESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKSAAVHRSNRFLIRKEGLVL*LMPA 212
           +E  K V+   SKP  + +   KK T+    PI+  + +R NRF I  E L L ++ A
Sbjct: 449 IERDKNVEITTSKPIVVYRETIKKKTE----PIEGKSPNRHNRFYISVEPLDLEIVSA 502

>THSB_AERPE (Q9YA66) Thermosome subunit beta (Thermosome subunit 2) (Chaperonin|
           beta subunit)
          Length = 548

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -2

Query: 448 KLKLLDLAQTEKKPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKT-FDVPIKSAAV 272
           ++ LLD     +KP   LE+ + S +++KAL  K + I+Q   +K   T  +V I    +
Sbjct: 245 RIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGI 304

Query: 271 HRSNRFLIRKEGLV 230
               +  + K+G++
Sbjct: 305 DDVAQHFLAKKGIL 318

>SYG1_YEAST (P40528) Protein SYG1|
          Length = 902

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -2

Query: 436 LDLAQTEKKPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKSAAVHRSNR 257
           L  AQ +K+P+  LE  +       AL + PK    N  K    T    I    VHR+NR
Sbjct: 340 LSSAQRDKEPITWLETQITEWFTT-ALTNSPKDRKHNTHKLKKLTIQYSISEQMVHRNNR 398

Query: 256 FLIR 245
            +++
Sbjct: 399 SIVQ 402

>UIDB_ECOLI (P30868) Glucuronide carrier protein (Glucuronide permease)|
          Length = 457

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +3

Query: 147 LLLYFPIKQSKQECNVHHEATPAGINHSTRPSLRIKNLFDLCTAALFMGTSNVFVGFLAS 326
           ++LYF   +S +E  V   A P+ +N S +   R + LF LC  AL +  S   V   + 
Sbjct: 194 MVLYFICFKSTRENVVRIVAQPS-LNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSL 252

Query: 327 FCTMVLGLESSAFTSLVLSRN 389
           F    +  ++  FT LVL +N
Sbjct: 253 FYVRYVLNDTGLFTVLVLVQN 273

>MRE11_THEAC (Q9HLR7) DNA double-strand break repair protein mre11|
          Length = 376

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
 Frame = -2

Query: 469 FFQEADEKLKLLDLAQTEKKPVKGLELFLESTKEV---------KALDSKPKTIVQNDAK 317
           +  E  EKL  L +   EKKP+ GLE+  + + E           A+ S+PK  ++ D K
Sbjct: 259 YVHEISEKLSSLRVKDNEKKPLVGLEIHGDISMETVMQDISKFDNAIFSRPK--IRKDPK 316

Query: 316 KP---TKTFDV 293
            P   T+T D+
Sbjct: 317 IPNIHTETADL 327

>RECA_LEPBI (P48290) Protein recA (Recombinase A)|
          Length = 387

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = -2

Query: 565 IELLDNKQDAANAGIWYLC--RMAGGIKEGINAKFFQEADEKLKLLDLAQTEKKPVKGLE 392
           I+L       A AG WY       G  KE +   F +  D   K+    + + + +  L 
Sbjct: 287 IDLAVRHDLVAKAGSWYSYGGEKIGQGKEQVKNFFLENPDIAFKI----ENQVRDLNSLP 342

Query: 391 LFLES---TKEVKALDSKPKTIVQNDAKKP 311
           L  +S   T+EVK+++  PK   +  +K+P
Sbjct: 343 LMDQSKIQTREVKSIERDPKETKETKSKQP 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,281,636
Number of Sequences: 219361
Number of extensions: 1685297
Number of successful extensions: 4649
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4645
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)